View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7060_low_24 (Length: 204)
Name: NF7060_low_24
Description: NF7060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7060_low_24 |
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Alignment Details
Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 2 - 198
Target Start/End: Original strand, 476376 - 476593
Alignment:
| Q |
2 |
ttattaactaagacaaataacttggtcttcaagccatccagttttcccaatagatcctattcaaggattacacaatgatgatactgaagaatatattgag |
101 |
Q |
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| T |
476376 |
ttattaactaagacaaataacttggtcttcaagccatccagttttcccaatagatcctattcaaggattacacaatgatgatactgaagaatatattgag |
476475 |
T |
|
| Q |
102 |
cctttgctggcaagttatttgacatccataaggccagatata---------------------agtcaatttctagattcaccaacctcagcacacttcc |
180 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
476476 |
cctttgttggcaagttatttgacatccataaggccagatataatattccttgtgcaacaagtcagtcaatttctagattcaccaacctcagcacacttcc |
476575 |
T |
|
| Q |
181 |
ctagtttgttcttctctc |
198 |
Q |
| |
|
||||||||||||| |||| |
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| T |
476576 |
ctagtttgttcttttctc |
476593 |
T |
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