View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7061_high_11 (Length: 349)
Name: NF7061_high_11
Description: NF7061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7061_high_11 |
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Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 9 - 330
Target Start/End: Original strand, 51936849 - 51937160
Alignment:
| Q |
9 |
gaagaatatcgatatctgctacatgtacaaacggatgtgttccctatttggacttcatagataatgggataatgatctggttatggcctaaggttgtcct |
108 |
Q |
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| T |
51936849 |
gaagaatatcgatatctgctacatgtacaaacggatgtgttccctatttggacttcatagataatg--------atctggttatggcctaaggttgtcct |
51936940 |
T |
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| Q |
109 |
gacagaaaacctgcaatatgcatctacatgcagctggaatggataaagcaaaatttgatagcacaattgnnnnnnnnnnnnnnnnnntgtagtagaggtg |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |
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| T |
51936941 |
gacagaaaacctgcaatatgcatctacatgcagctggaatggataaagcacaatttgatagcacaattgaaaaaaaaaataaaaa--tgtagtagaggtg |
51937038 |
T |
|
| Q |
209 |
agactaattgaaaggaaatttctttgaaggactaattgaaagtaaattgttataagtaccaccaacattgagaaaaaggttcaaattgcggtcgtagcta |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
51937039 |
agactaattgaaaggaaatttctttgaaggactaattgaaagtaaattgttataagtaccaccaacattgagaaaaaggttcaaattgcggtcgtagcaa |
51937138 |
T |
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| Q |
309 |
aaacaatggctgatgagattag |
330 |
Q |
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|||||||||||||||||||||| |
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| T |
51937139 |
aaacaatggctgatgagattag |
51937160 |
T |
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