View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7061_low_21 (Length: 316)
Name: NF7061_low_21
Description: NF7061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7061_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 18 - 305
Target Start/End: Original strand, 42325621 - 42325907
Alignment:
| Q |
18 |
attcttgccatttcacaaaagagtgaaaaagagaaaagaaagttgagtggaaacttaagagtacaactcagataactcttcttgttgaggaaaaggagtt |
117 |
Q |
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| T |
42325621 |
attcttgccatttcacaaaagagtgaaaaagagaaaagaaatttgagtggaaacttaagagtacaactcagataattcttcttgttgaggaaa-ggagtt |
42325719 |
T |
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| Q |
118 |
atgttgagcttcttatttatattgtcttaaaagtatctttcaaggttaagtgttatttttcccattttaaatatgttacatgcaagatataatttaatta |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42325720 |
atgttgagcttcttatttatattgtcttaaaagtatctttcaaggttaagtgttatttttcccattttaaatatgttacatgcaagatataatttaatta |
42325819 |
T |
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| Q |
218 |
gatctatagaaaagagggattctatagggtgtaaaaatacaggttcaggtgctcccaccactcttgatattggtttggttctgttcat |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42325820 |
gatctatagaaaagagggattctatagggtgtaaaaatacaggttcaggtgctcccaccactcttgatattggtttggttctgttcat |
42325907 |
T |
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