View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7062_high_13 (Length: 249)

Name: NF7062_high_13
Description: NF7062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7062_high_13
NF7062_high_13
[»] chr4 (17 HSPs)
chr4 (1-245)||(26812462-26812706)
chr4 (1-245)||(26821929-26822173)
chr4 (1-245)||(3242277-3242521)
chr4 (1-245)||(37059040-37059284)
chr4 (1-245)||(54689902-54690147)
chr4 (1-245)||(54699333-54699578)
chr4 (1-245)||(3918020-3918265)
chr4 (1-245)||(15842888-15843132)
chr4 (47-237)||(20884447-20884636)
chr4 (47-245)||(50516488-50516685)
chr4 (47-245)||(11482315-11482512)
chr4 (50-220)||(23622919-23623088)
chr4 (49-238)||(18125409-18125595)
chr4 (50-127)||(16489947-16490025)
chr4 (47-110)||(41902641-41902703)
chr4 (158-222)||(112634-112698)
chr4 (158-222)||(14917028-14917092)
[»] chr5 (29 HSPs)
chr5 (1-242)||(30454194-30454435)
chr5 (1-245)||(30459249-30459493)
chr5 (1-245)||(24422231-24422475)
chr5 (1-245)||(24412782-24413026)
chr5 (1-245)||(30444819-30445063)
chr5 (8-245)||(18569000-18569238)
chr5 (1-245)||(22489139-22489383)
chr5 (1-245)||(4635899-4636143)
chr5 (50-245)||(42732567-42732761)
chr5 (9-228)||(24244050-24244267)
chr5 (9-228)||(24290674-24290891)
chr5 (13-237)||(13815371-13815593)
chr5 (47-245)||(33955489-33955687)
chr5 (47-241)||(11223376-11223568)
chr5 (47-203)||(22118134-22118291)
chr5 (47-245)||(20035999-20036197)
chr5 (50-220)||(5600580-5600749)
chr5 (50-220)||(5610226-5610395)
chr5 (47-232)||(20834431-20834615)
chr5 (50-220)||(31150651-31150820)
chr5 (70-245)||(26652642-26652816)
chr5 (70-245)||(26924227-26924401)
chr5 (154-245)||(22448320-22448411)
chr5 (154-238)||(37514856-37514940)
chr5 (179-245)||(22457656-22457722)
chr5 (47-220)||(16110881-16111058)
chr5 (158-222)||(718954-719018)
chr5 (158-222)||(727934-727998)
chr5 (158-222)||(6331671-6331735)
[»] chr6 (12 HSPs)
chr6 (1-245)||(23895606-23895850)
chr6 (1-245)||(18420505-18420749)
chr6 (49-240)||(14102308-14102500)
chr6 (47-245)||(22066293-22066491)
chr6 (47-231)||(23884492-23884675)
chr6 (69-231)||(10259783-10259945)
chr6 (48-245)||(17512213-17512408)
chr6 (75-220)||(11421466-11421611)
chr6 (95-240)||(12173469-12173613)
chr6 (49-212)||(23110242-23110405)
chr6 (50-176)||(12415064-12415190)
chr6 (54-148)||(13218359-13218453)
[»] chr3 (21 HSPs)
chr3 (1-245)||(24794536-24794780)
chr3 (1-245)||(28367643-28367887)
chr3 (1-245)||(28375461-28375705)
chr3 (1-245)||(28383283-28383527)
chr3 (1-245)||(28351710-28351954)
chr3 (1-245)||(38529167-38529411)
chr3 (9-245)||(4951555-4951791)
chr3 (47-231)||(5385690-5385873)
chr3 (47-245)||(13328268-13328465)
chr3 (47-245)||(23487041-23487240)
chr3 (47-245)||(46305563-46305760)
chr3 (50-220)||(17529877-17530046)
chr3 (50-220)||(32877870-32878039)
chr3 (50-220)||(54624655-54624824)
chr3 (50-220)||(48978670-48978835)
chr3 (50-220)||(48988210-48988375)
chr3 (49-151)||(7784091-7784194)
chr3 (94-220)||(19388809-19388936)
chr3 (49-238)||(4361513-4361699)
chr3 (158-240)||(7783984-7784066)
chr3 (154-198)||(24285493-24285537)
[»] scaffold0040 (2 HSPs)
scaffold0040 (1-245)||(30813-31057)
scaffold0040 (9-245)||(10006-10239)
[»] scaffold0028 (3 HSPs)
scaffold0028 (1-245)||(94420-94665)
scaffold0028 (1-245)||(103861-104106)
scaffold0028 (158-222)||(82272-82336)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-245)||(408282-408526)
[»] chr7 (17 HSPs)
chr7 (1-245)||(7592960-7593204)
chr7 (1-245)||(15174494-15174738)
chr7 (9-228)||(11634337-11634554)
chr7 (47-237)||(14634776-14634965)
chr7 (47-245)||(14644467-14644665)
chr7 (47-237)||(33292175-33292364)
chr7 (47-245)||(15947362-15947560)
chr7 (48-245)||(32817997-32818193)
chr7 (47-245)||(9736946-9737143)
chr7 (49-229)||(19352595-19352775)
chr7 (84-245)||(13874423-13874582)
chr7 (121-238)||(48710004-48710121)
chr7 (53-234)||(4306559-4306739)
chr7 (47-115)||(48711401-48711469)
chr7 (158-222)||(607218-607282)
chr7 (158-222)||(616313-616377)
chr7 (158-245)||(13951987-13952074)
[»] scaffold0482 (1 HSPs)
scaffold0482 (1-240)||(3487-3726)
[»] chr8 (25 HSPs)
chr8 (1-240)||(7789073-7789312)
chr8 (1-245)||(20714023-20714267)
chr8 (9-231)||(18883164-18883384)
chr8 (9-237)||(18143427-18143653)
chr8 (47-245)||(42712168-42712365)
chr8 (9-228)||(18232890-18233107)
chr8 (9-228)||(18242341-18242558)
chr8 (9-231)||(25051067-25051287)
chr8 (9-228)||(18251792-18252009)
chr8 (9-231)||(25037030-25037250)
chr8 (47-245)||(20030179-20030376)
chr8 (47-245)||(20044818-20045015)
chr8 (50-231)||(31575415-31575595)
chr8 (48-245)||(12925355-12925552)
chr8 (47-245)||(12767631-12767830)
chr8 (9-237)||(4843720-4843948)
chr8 (84-245)||(33601763-33601923)
chr8 (84-245)||(33592124-33592284)
chr8 (48-231)||(24096079-24096262)
chr8 (88-245)||(12915500-12915657)
chr8 (47-231)||(15833950-15834134)
chr8 (88-225)||(24634009-24634145)
chr8 (170-237)||(20714417-20714484)
chr8 (84-210)||(42896174-42896299)
chr8 (174-231)||(26194049-26194106)
[»] chr2 (13 HSPs)
chr2 (5-245)||(31710456-31710696)
chr2 (1-245)||(24022732-24022976)
chr2 (13-240)||(14273170-14273397)
chr2 (47-238)||(35877516-35877706)
chr2 (47-238)||(35885005-35885195)
chr2 (47-238)||(36724718-36724908)
chr2 (50-220)||(1800493-1800662)
chr2 (50-220)||(22632402-22632571)
chr2 (47-231)||(3396923-3397106)
chr2 (50-220)||(1790999-1791164)
chr2 (69-239)||(18578707-18578877)
chr2 (154-223)||(16446670-16446739)
chr2 (165-240)||(29911278-29911353)
[»] chr1 (11 HSPs)
chr1 (47-240)||(5378419-5378613)
chr1 (9-245)||(15809966-15810208)
chr1 (47-245)||(40999025-40999224)
chr1 (47-237)||(14272016-14272205)
chr1 (47-231)||(14281888-14282071)
chr1 (50-240)||(26906241-26906431)
chr1 (61-240)||(21633594-21633772)
chr1 (47-223)||(3470949-3471124)
chr1 (84-245)||(21919421-21919581)
chr1 (47-197)||(30676788-30676938)
chr1 (91-231)||(28310019-28310155)
[»] scaffold0010 (1 HSPs)
scaffold0010 (9-231)||(256921-257141)
[»] scaffold0206 (1 HSPs)
scaffold0206 (47-245)||(2109-2306)
[»] scaffold0021 (3 HSPs)
scaffold0021 (47-245)||(124047-124244)
scaffold0021 (69-220)||(100002-100152)
scaffold0021 (47-115)||(143169-143237)
[»] scaffold0269 (1 HSPs)
scaffold0269 (50-220)||(14830-14999)
[»] scaffold0247 (1 HSPs)
scaffold0247 (50-220)||(24593-24762)
[»] scaffold0053 (1 HSPs)
scaffold0053 (84-245)||(2251-2411)
[»] scaffold0334 (1 HSPs)
scaffold0334 (84-245)||(12538-12698)
[»] scaffold0223 (1 HSPs)
scaffold0223 (47-210)||(27078-27246)
[»] scaffold0233 (1 HSPs)
scaffold0233 (1-47)||(26309-26355)
[»] scaffold0096 (1 HSPs)
scaffold0096 (158-222)||(49501-49565)


Alignment Details
Target: chr4 (Bit Score: 237; Significance: 1e-131; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 26812462 - 26812706
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26812462 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 26812561  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26812562 ctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 26812661  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  26812662 ggtttggtgaaccaggataactctcctgtgttattcttctctctc 26812706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 26821929 - 26822173
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26821929 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 26822028  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26822029 ctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 26822128  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  26822129 ggtttggtgaaccaggataactctcctgtgttattcttctctctc 26822173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 3242521 - 3242277
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  3242521 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagaggttacggactgat 3242422  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3242421 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 3242322  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  3242321 ggtttggtgaaccaggataactctcctgtgttattcttctctctc 3242277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 37059040 - 37059284
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37059040 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgtaacggactgat 37059139  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37059140 ctggtgtgatcaagatcttgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 37059239  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  37059240 ggtttggtgaaccaggataactctcctgtgttattcttctctctc 37059284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 54690147 - 54689902
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  54690147 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagaggttacggactgat 54690048  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54690047 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 54689948  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattct-tctctctc 245  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  54689947 ggtttggtgaaccaggataactctcctgtgttattctctctctctc 54689902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 54699578 - 54699333
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  54699578 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagaggttacggactgat 54699479  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54699478 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 54699379  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattct-tctctctc 245  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  54699378 ggtttggtgaaccaggataactctcctgtgttattctctctctctc 54699333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 3918020 - 3918265
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  3918020 ttaatagttttgagaaagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagaggttacggactgat 3918119  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3918120 ctggtgtgatcaagaaattgtaatgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 3918219  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattct-tctctctc 245  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  3918220 ggtttggtgaaccaggataactctcctgtgttattctctctctctc 3918265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 15843132 - 15842888
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || |||||||    
T  15843132 ttaatagttttgagatagaaaatttcaacctttcttttgctagtgtgcaaagaattgtagaagcctgcttaggttgataatacaggtgtaacagactgat 15843033  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||| |||||||||||  || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15843032 ctgatgtgatcaagatcttatagtgctagtcagaagtttctgttagcaagacaactatagtggataatctcacacgaggtgtggggactggaagtagccg 15842933  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
     ||||||||||||| |||||||||||||||| |||| ||||||||    
T  15842932 agtttggtgaaccaagataactctcctgtgttattcctctctctc 15842888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 47 - 237
Target Start/End: Complemental strand, 20884636 - 20884447
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||| |  || ||||| | || ||||||||||   |     
T  20884636 gcaaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctggtgtgatcaaaaccttatagtgttggttagaagtttct---ac 20884540  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattct 237  Q
    |||  | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  20884539 caactgcatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggggaaccaggataactctcctgtgttattct 20884447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 47 - 245
Target Start/End: Complemental strand, 50516685 - 50516488
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    |||||||||||||  ||||||||||||||||||||||| | ||||||||||||||||||||||||||||  || ||||| | || |||| |||||   |     
T  50516685 gcaaagaattgtaacagcctgctgaggttgataatacaagggttacggactgatctggtgtgatcaagaccttatagtgttggttagaaatttct---ac 50516589  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctct 244  Q
    |||  ||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||| |||    
T  50516588 caacggaatactatagtggataatctcacacgaagtgtggggactggaagtagtcgggtttggggaaccaggataactctcctgtgttattcttctttct 50516489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 47 - 245
Target Start/End: Original strand, 11482315 - 11482512
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| ||||| |||||||||||||||||||| ||||||||||||| ||||||||| ||||  || ||||| | || ||||||||||   |     
T  11482315 gcaaagaattgtagaagccggctgaggttgataatacaggggttacggactgatatggtgtgataaagaccttatagtgttggttagaagtttct---ac 11482411  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctct 244  Q
    |||  | | |||||||||||||||||||||||| ||||||||||| |||||||||||||||||  ||||||||||||||||||  || |||||||| |||    
T  11482412 caactgtatactatagtggataatctcacacgaagtgtggggactagaagtagccgggtttggacaaccaggataactctcctacgttattcttctttct 11482511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 23622919 - 23623088
Alignment:
Q  50 aagaattgtataagcctgctgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagca 148  Q
    |||||| ||| ||||||||||||||||||||||||| |||| || |||||||||||||||||||| | ||| |||||||| ||||||||||||| |||||    
T  23622919 aagaatcgtagaagcctgctgaggttgataatacagagtgtaacagactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagca 23623018  T
Q  149 agaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataa 220  Q
     || | ||||||||||||||||||||||  |||||||||||||| |||||| |||| || ||||||||||||    
T  23623019 ggata-ctatagtggataatctcacacgtagtgtggggactggacgtagcc-ggttaggcgaaccaggataa 23623088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 49 - 238
Target Start/End: Complemental strand, 18125595 - 18125409
Alignment:
Q  49 aaagaattgtataagcctgctgaggttgataataca-ggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagc 147  Q
    ||||||||| | ||| |||||||||||||||||||| ||||| || || ||||||| |||||||||    ||  | |||| || |||||||| |||||||    
T  18125595 aaagaattgaagaagtctgctgaggttgataatacaaggtgtaacagaatgatctgttgtgatcaat---tttcaatgctggtaagaagtttttgttagc 18125499  T
Q  148 aagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattctt 238  Q
    | || | ||||| |||||||||||||||||||||||| ||| | || || |||| |||  ||||||||||||| |||| ||||| ||||||    
T  18125498 aggata-ctataatggataatctcacacgaggtgtggagaccgaaaataaccggatttaatgaaccaggataaatctcttgtgtcattctt 18125409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 16490025 - 16489947
Alignment:
Q  50 aagaattgtataagcctgctgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgct 127  Q
    |||||| ||| ||| ||||||||||||||||||| | |||| || ||||||| |||||||||||| ||||| |||||||    
T  16490025 aagaatcgtagaagtctgctgaggttgataatactgagtgtaacagactgatatggtgtgatcaacaaattatagtgct 16489947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 41902703 - 41902641
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgat 110  Q
    |||||||||||||||||| || ||| |||||||||| | |||| || |||||||||||||||||    
T  41902703 gcaaagaattgtataagcatgttgaagttgataataga-gtgtaactgactgatctggtgtgat 41902641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 112634 - 112698
Alignment:
Q  158 tagtggataatctcacacgaggtgtggggactggaagtagccgg-gtttggtgaaccaggataact 222  Q
    ||||||||||||||||||  | |||||||| ||||||||||||| |||||| |||||| |||||||    
T  112634 tagtggataatctcacacttg-tgtggggagtggaagtagccggcgtttggcgaaccacgataact 112698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 14917028 - 14917092
Alignment:
Q  158 tagtggataatctcacacgaggtgtggggactggaagtagccgg-gtttggtgaaccaggataact 222  Q
    ||||||||||||||||||  | |||||||| ||||||||||||| |||||| |||||| |||||||    
T  14917028 tagtggataatctcacacttg-tgtggggagtggaagtagccggcgtttggcgaaccacgataact 14917092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 30454435 - 30454194
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30454435 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 30454336  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30454335 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 30454236  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctct 242  Q
    ||||||||||||||||||||||||||||||| ||| ||||||    
T  30454235 ggtttggtgaaccaggataactctcctgtgttatttttctct 30454194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 30459493 - 30459249
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30459493 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgccgaggttgataatacaggtgttacggactgat 30459394  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30459393 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 30459294  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||    
T  30459293 ggtttggtgaaccaggataactctcctgtgttatttttctctctc 30459249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 24422231 - 24422475
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  24422231 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagaggttacggactgat 24422330  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24422331 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 24422430  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    | ||||||||||||||||||||||||||||| |||||||||||||    
T  24422431 gatttggtgaaccaggataactctcctgtgttattcttctctctc 24422475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 24412782 - 24413026
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  24412782 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagaggttacagactgat 24412881  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24412882 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 24412981  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    | ||||||||||||||||||||||||||||| |||||||||||||    
T  24412982 gatttggtgaaccaggataactctcctgtgttattcttctctctc 24413026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 30445063 - 30444819
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30445063 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttatggactgat 30444964  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30444963 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 30444864  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||| ||||||||||||||||||| |||  ||||||||    
T  30444863 ggtttggtgaatcaggataactctcctgtgttatttctctctctc 30444819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 8 - 245
Target Start/End: Original strand, 18569000 - 18569238
Alignment:
Q  8 ttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  18569000 ttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagaggttacggactgatctggtgt 18569099  T
Q  108 gatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttgg 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18569100 gatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttgg 18569199  T
Q  208 tgaaccaggataactctcctgtgtgattct-tctctctc 245  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  18569200 tgaaccaggataactctcctgtgttattctctctctctc 18569238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 22489139 - 22489383
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  22489139 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtagaagtctgctgaggttgataatacaggtgtaacggactgat 22489238  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    |||||||||||||||  || |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22489239 ctggtgtgatcaagatcttatagtgctagtcataagtttctgttagcaagacaactatagtggataatctcacacgaggtgtggggactggaagtagccg 22489338  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  22489339 ggtttggtgaaccaggataactctcctgtgttattcttctctctc 22489383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 4635899 - 4636143
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||    
T  4635899 ttaatagttttgagatagaaaattccaacatttcttttgctagtgtgcaaagaattgtagaagcctgctgaggttgataaaacaggtgtaacggactgat 4635998  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
     ||||||||||||||  || ||||||| ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| || ||||||    
T  4635999 atggtgtgatcaagatcttatagtgctggtcagaagtttctgttagcaagacaactatagtggataatctcacgtgaggtgtggggactgaaaatagccg 4636098  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||||||||||||||||| ||||| |||| ||||||||    
T  4636099 ggtttggtgaaccaggataactctcatgtgttattcctctctctc 4636143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 50 - 245
Target Start/End: Complemental strand, 42732761 - 42732567
Alignment:
Q  50 aagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa 149  Q
    |||||||||| ||||||| |||||||||||||||||| |||  |||||||||||||||||||||||  || |||||||||| ||||||||||  ||||      
T  42732761 aagaattgtagaagcctgttgaggttgataatacaggggttctggactgatctggtgtgatcaagaccttatagtgctagttagaagtttctactagct- 42732663  T
Q  150 gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  42732662 gaatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcttgtgttattcttctttctc 42732567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 228
Target Start/End: Complemental strand, 24244267 - 24244050
Alignment:
Q  9 tttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtat-aagcctgctgaggttgataatacaggtgttacggactgatctggtgt 107  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||  || ||||||||||||||||||||||  |||||  ||||||| |||||    
T  24244267 tttgagatagaaaattccaacctttcttttgctagtg--caaagaattgtaagaatcctgctgaggttgataatacagaggttacaaactgatcgggtgt 24244170  T
Q  108 gatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttgg 207  Q
    ||||||||  |||||||| |  | |||||||||||  | |  ||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  24244169 gatcaagacgttgtagtgttgattagaagtttctgccaact-gaatactatagtggataatctcacacgaagtgtggggactggaagtagccggatttgg 24244071  T
Q  208 tgaaccaggataactctcctg 228  Q
    |||||||||||||||||||||    
T  24244070 tgaaccaggataactctcctg 24244050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 228
Target Start/End: Complemental strand, 24290891 - 24290674
Alignment:
Q  9 tttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtat-aagcctgctgaggttgataatacaggtgttacggactgatctggtgt 107  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||  || ||||||||||||||||||||||  |||||  ||||||| |||||    
T  24290891 tttgagatagaaaattccaacctttcttttgctagtg--caaagaattgtaagaatcctgctgaggttgataatacagaggttacaaactgatcgggtgt 24290794  T
Q  108 gatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttgg 207  Q
    ||||||||  |||||||| |  | |||||||||||  | |  ||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  24290793 gatcaagacgttgtagtgttgattagaagtttctgccaact-gaatactatagtggataatctcacacgaagtgtggggactggaagtagccggatttgg 24290695  T
Q  208 tgaaccaggataactctcctg 228  Q
    |||||||||||||||||||||    
T  24290694 tgaaccaggataactctcctg 24290674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 237
Target Start/End: Complemental strand, 13815593 - 13815371
Alignment:
Q  13 agatagaaaattccaacctttcttttgctagtgtgcaaagaattgtat-aagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatc 111  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||||||||| | ||||| || |||||||||||||||    
T  13815593 agatagaaaattccaacctttcttttgctagtg--caaagaattgtaagaagcctgttgaggttgataatacaagggttacagaatgatctggtgtgatc 13815496  T
Q  112 aagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtg 209  Q
    ||||  || ||||| | || ||||||||||   | |||  ||| ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||    
T  13815495 aagaccttatagtgttggttagaagtttct---accaactgaatactatagtggataatctcacatgaagtgtggggactggaagtagccggatttggtg 13815399  T
Q  210 aaccaggataactctcctgtgtgattct 237  Q
    |||||||||||||||||||||| |||||    
T  13815398 aaccaggataactctcctgtgttattct 13815371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 47 - 245
Target Start/End: Complemental strand, 33955687 - 33955489
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||  |||||| |||||||||||||||||||||  || ||||| | || ||||||||||   |     
T  33955687 gcaaagaattgtagaagcctgctgaggttgataatacagtggttacgtactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---ac 33955591  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattct-tctctc 243  Q
    |||  | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  33955590 caactgcatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattctctctctc 33955491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 47 - 241
Target Start/End: Original strand, 11223376 - 11223568
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   |     
T  11223376 gcaaagaattgtagaagcctgctgaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---ac 11223472  T
Q  147 caa-gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctc 241  Q
    ||  | | |||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||  ||||| |||||||||    
T  11223473 cactgtatactataatggataatctcacacgaagtgtggggactggaagtagccgagtttggtgaaccaggataactcttttgtgttattcttctc 11223568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 47 - 203
Target Start/End: Complemental strand, 22118291 - 22118134
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacagg-tgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgtta 145  Q
    ||||| ||||||| |||| |||||| |||||||||||||| ||| || ||||||||||||||||||||||  || ||||| || ||||||||||||||||    
T  22118291 gcaaataattgtagaagcatgctgatgttgataatacaggatgtaacagactgatctggtgtgatcaagaccttatagtgttattcagaagtttctgtta 22118192  T
Q  146 gcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggt 203  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  22118191 gcaagacaactataatggataatctcacacgaggtgtggggactggaagtagtcgggt 22118134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 47 - 245
Target Start/End: Original strand, 20035999 - 20036197
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| ||||||||| |||||||||||| ||  |||| |||||||||||||||||||||||  || ||||| | || ||||||||||   |     
T  20035999 gcaaagaattgtagaagcctgctaaggttgataatatagtggttatggactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---ac 20036095  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattct-tctctc 243  Q
    |||  | | ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||    
T  20036096 caactgtatactatagtggataatctcacatgatgtgtggggactggaagtagccgggtttggtgaaccaggataactctcctatgttattctctctctc 20036195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 5600580 - 5600749
Alignment:
Q  50 aagaattgtataagcctgctgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagca 148  Q
    |||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| | ||| |||||||| ||||||||||||| |||||    
T  5600580 aagaatcgtagaagcctgctgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagca 5600679  T
Q  149 agaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataa 220  Q
     || | |||||||||||||||||||||| ||||||||||||||| |||||| |||| || ||||||||||||    
T  5600680 ggata-ctatagtggataatctcacacgtggtgtggggactggacgtagcc-ggttaggcgaaccaggataa 5600749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 5610226 - 5610395
Alignment:
Q  50 aagaattgtataagcctgctgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagca 148  Q
    |||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| | ||| |||||||| ||||||||||||| |||||    
T  5610226 aagaatcgtagaagcctgctgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagca 5610325  T
Q  149 agaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataa 220  Q
     || | |||||||||||||||||||||| ||||||||||||||| |||||| |||| || ||||||||||||    
T  5610326 ggata-ctatagtggataatctcacacgtggtgtggggactggacgtagcc-ggttaggcgaaccaggataa 5610395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 47 - 232
Target Start/End: Original strand, 20834431 - 20834615
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||| | |||||||||||||||||| ||||||  |||||| ||||||||||| |||||||||  || ||||| | || ||||||||||   |     
T  20834431 gcaaagaattggagaagcctgctgaggttgattatacagtggttacgaactgatctggtatgatcaagaccttatagtgttggttagaagtttct---ac 20834527  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtg 232  Q
    |||  | | |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20834528 caactgcatactatagtggataatctcacacggagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtg 20834615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 220
Target Start/End: Complemental strand, 31150820 - 31150651
Alignment:
Q  50 aagaattgtataagcctgctgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagca 148  Q
    |||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| | ||| |||||||| ||||||||||||| ||||     
T  31150820 aagaatcgtagaagcctgctgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagc- 31150722  T
Q  149 agaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataa 220  Q
    || | |||||||||||||||||||||||  |||||||||||||| |||||| |||| || ||||||||||||    
T  31150721 aggatactatagtggataatctcacacgtagtgtggggactggacgtagcc-ggttaggcgaaccaggataa 31150651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 70 - 245
Target Start/End: Original strand, 26652642 - 26652816
Alignment:
Q  70 gaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatc 169  Q
    ||||||||||||||| | |||  | |||||| ||||||||||||||  |  |||||||||| |||||||||| |||||  ||| |||||||||||| |||    
T  26652642 gaggttgataatacaagggttctgaactgatatggtgtgatcaagacctaatagtgctagttagaagtttctattagct-gaatactatagtggattatc 26652740  T
Q  170 tcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    |||||||| ||||||||||||||||||| | ||||||||||||||| ||||||||||||||| |||||||| ||||    
T  26652741 tcacacgaagtgtggggactggaagtagtcaggtttggtgaaccagcataactctcctgtgttattcttctttctc 26652816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 70 - 245
Target Start/End: Original strand, 26924227 - 26924401
Alignment:
Q  70 gaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatc 169  Q
    ||||||||||||||| | |||  | |||||| ||||||||||||||  |  |||||||||| |||||||||| |||||  ||| |||||||||||| |||    
T  26924227 gaggttgataatacaagggttctgaactgatatggtgtgatcaagacctaatagtgctagttagaagtttctattagct-gaatactatagtggattatc 26924325  T
Q  170 tcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    |||||||| ||||||||||||||||||| | ||||||||||||||| ||||||||||||||| |||||||| ||||    
T  26924326 tcacacgaagtgtggggactggaagtagtcaggtttggtgaaccagcataactctcctgtgttattcttctttctc 26924401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 154 - 245
Target Start/End: Complemental strand, 22448411 - 22448320
Alignment:
Q  154 actatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||| ||||| |||  ||||||||    
T  22448411 actatagtggataatctcacacgaagtgtggggactggaagtagccggattgggtgaaccaggataactctcttgtgttatttctctctctc 22448320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 37514940 - 37514856
Alignment:
Q  154 actatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattctt 238  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||| |||| |||||||| |||| |||| ||||| ||||||    
T  37514940 actatagtggataatctcacacaaggtgtggggactagaagtagccggctttgatgaaccagtataaatctcatgtgttattctt 37514856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 22457722 - 22457656
Alignment:
Q  179 gtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||| |||||| |||  ||||||||    
T  22457722 gtgtggggactggaagtagccggattgggtgaacaaggataactcttctgtgttatttctctctctc 22457656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 220
Target Start/End: Original strand, 16110881 - 16111058
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacagg-tgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgtta 145  Q
    ||||| |||||||||| |||| ||| |||||||||||||  ||| || || || |||||||||||||||||  | ||||| || ||  |||||| || ||    
T  16110881 gcaaataattgtataaacctgttgatgttgataatacagaatgtaacagattggtctggtgtgatcaagaacatatagtgttattccaaagtttttgata 16110980  T
Q  146 gcaagaaaactatagtggat---aatctcacacgaggtgtggggactggaagtagccgg-gtttggtgaaccaggataa 220  Q
    | | || | ||||| |||||   |||||||||||| |||| ||||||||||||||||||  |||||||||||| |||||    
T  16110981 gtaggata-ctataatggatggtaatctcacacgaagtgtcgggactggaagtagccggcttttggtgaaccatgataa 16111058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 719018 - 718954
Alignment:
Q  158 tagtggataatctcacacgaggtgtggggactggaagtagccgg-gtttggtgaaccaggataact 222  Q
    ||||||||||||||||||  | |||||||| ||||||||||||| |||||| |||||| |||||||    
T  719018 tagtggataatctcacacttg-tgtggggagtggaagtagccggcgtttggcgaaccacgataact 718954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 727998 - 727934
Alignment:
Q  158 tagtggataatctcacacgaggtgtggggactggaagtagccgg-gtttggtgaaccaggataact 222  Q
    ||||||||||||||||||  | |||||||| ||||||||||||| |||||| |||||| |||||||    
T  727998 tagtggataatctcacacttg-tgtggggagtggaagtagccggcgtttggcgaaccacgataact 727934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 6331735 - 6331671
Alignment:
Q  158 tagtggataatctcacacgaggtgtggggactggaagtagccgg-gtttggtgaaccaggataact 222  Q
    ||||||||||||||||||  | |||||||| ||||||||||||| |||||| |||||| |||||||    
T  6331735 tagtggataatctcacacttg-tgtggggagtggaagtagccggcgtttggcgaaccacgataact 6331671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 23895850 - 23895606
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23895850 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgtaacggactgat 23895751  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23895750 ctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 23895651  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  23895650 ggtttggtgaaccaggataactctcctgtgttattcttctctctc 23895606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 18420505 - 18420749
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18420505 ttaatagtttggagatagaaaattccaacctttcttttgctattgtgcaaagaattgtataagcctgctgaggttgataatacaggtgtaacggactgat 18420604  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    |||||||||||||||  |  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  18420605 ctggtgtgatcaagatttgttagtgctagtcagaagtttctgttagcaagaaaactatagtgtataatctcacacgaggtgtcgggactggaagtagccg 18420704  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||| |||||||||||||||| |||||||| |||||||||||||    
T  18420705 ggttttgtgaaccaggataactatcctgtgttattcttctctctc 18420749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 49 - 240
Target Start/End: Original strand, 14102308 - 14102500
Alignment:
Q  49 aaagaattgtataagcctgctgaggttgataatacagg-tgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagc 147  Q
    ||||||||||| ||| ||||||||||| |||||||||| ||| || | |||||||| |||||||||||  ||  ||||||||||| ||||||||||||||    
T  14102308 aaagaattgtagaagtctgctgaggttaataatacagggtgtaacaggctgatctgttgtgatcaagaccttacagtgctagtcaaaagtttctgttagc 14102407  T
Q  148 aagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttct 240  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| ||||||||    
T  14102408 aagacaactatagtggataatctcacaagaggtgtggggactggaagtagccgggtttggtgaaccaggataattcttcagtgttattcttct 14102500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 47 - 245
Target Start/End: Original strand, 22066293 - 22066491
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||||||||||| ||||||||||||  || ||||| | || ||||||||||   |     
T  22066293 gcaaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctagtgtgatcaagaccttatagtgttggttagaagtttct---ac 22066389  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattct-tctctc 243  Q
    |||  | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  22066390 caactgcatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattctctctctc 22066489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 47 - 231
Target Start/End: Original strand, 23884492 - 23884675
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||  || ||||| | || ||||||||||   |     
T  23884492 gcaaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---ac 23884588  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgt 231  Q
    |||  | | ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23884589 caactgcatactatagtggacaatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgt 23884675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 231
Target Start/End: Complemental strand, 10259945 - 10259783
Alignment:
Q  69 tgaggttgataatacagg-tgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 167  Q
    ||||||| |||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||||||||||| ||||| || | ||||||||||| ||    
T  10259945 tgaggtttataatacagggtgtaacggactgatctggtgtgatcaagaatttatagtgctagtcagaagtttctcttagc-aggatactatagtggagaa 10259847  T
Q  168 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgt 231  Q
    || ||||||| ||||| |||||||||||||| || ||||||||||||| |||| ||||||||||    
T  10259846 tcccacacgaagtgtgaggactggaagtagctggatttggtgaaccagaataattctcctgtgt 10259783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 48 - 245
Target Start/End: Complemental strand, 17512408 - 17512213
Alignment:
Q  48 caaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagc 147  Q
    |||||||||||| ||||||||| |||||||||||||||| ||||| ||||||||| ||||||||||||  || ||||| | || ||||||||||   | |    
T  17512408 caaagaattgtagaagcctgctaaggttgataatacagg-gttacagactgatctagtgtgatcaagactttatagtgttggttagaagtttct---acc 17512313  T
Q  148 aa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||  | | ||||||||||||||||||||| || |||||||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||| ||||    
T  17512312 aactgtatactatagtggataatctcacaagaagtgtggggactgaaagtagccgagtttggtgaaccaggataactcttctgtgttattcttctttctc 17512213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 220
Target Start/End: Complemental strand, 11421611 - 11421466
Alignment:
Q  75 tgataataca-ggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcac 173  Q
    |||||||||| ||||| || ||||||||||||||||||||||  || ||||| ||||||||| ||| ||||| || || | |||||||||||||||||||    
T  11421611 tgataatacatggtgtaacagactgatctggtgtgatcaagatcttatagtgttagtcagaattttttgttaacatgata-ctatagtggataatctcac 11421513  T
Q  174 acgaggtgtggggactggaagtagccgggtttggtgaaccaggataa 220  Q
    |||||||||||||||||||||||||||| |||| ||||| |||||||    
T  11421512 acgaggtgtggggactggaagtagccggatttgatgaactaggataa 11421466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 95 - 240
Target Start/End: Original strand, 12173469 - 12173613
Alignment:
Q  95 actgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaag 194  Q
    |||||||||||||||||||||| || | |||||||||| ||||||||||||||| || | |||||||||||||||| |||| |||||||||||||| |||    
T  12173469 actgatctggtgtgatcaagaatttatggtgctagtcataagtttctgttagcatgata-ctatagtggataatcttacacaaggtgtggggactgaaag 12173567  T
Q  195 tagccgggtttggtgaaccaggataactctcctgtgtgattcttct 240  Q
    |||||| ||||||||||| | ||||| ||||  |||| ||||||||    
T  12173568 tagccgagtttggtgaactatgataaatctcaggtgttattcttct 12173613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 49 - 212
Target Start/End: Complemental strand, 23110405 - 23110242
Alignment:
Q  49 aaagaattgtataagcctgctgaggttgataatacagg-tgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagc 147  Q
    |||||||| || ||||||| ||| ||||||||||  || ||| |  |||| ||||||||||||||||||  | |||||||||||||||||||||||||||    
T  23110405 aaagaattttagaagcctgttgatgttgataatattgggtgtaatagacttatctggtgtgatcaagaacatatagtgctagtcagaagtttctgttagc 23110306  T
Q  148 aagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaac 212  Q
      ||| ||||||||||||||||| ||||| ||||||||||||||||||||| || ||| ||||||    
T  23110305 c-gaatactatagtggataatctaacacggggtgtggggactggaagtagctggttttcgtgaac 23110242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 12415064 - 12415190
Alignment:
Q  50 aagaattgtataagcctgctgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagca 148  Q
    |||||| ||| |||||||||  |||| ||||||||| |||| |||||||||||||||||||||||   ||| |||||||| | ||||||||||| ||       
T  12415064 aagaatcgtagaagcctgctatggttaataatacagagtgtaacggactgatctggtgtgatcaacttattatagtgctattaagaagtttctgata-ag 12415162  T
Q  149 agaaaactatagtggataatctcacacg 176  Q
    || | |||||| ||||||||||||||||    
T  12415163 aggatactataatggataatctcacacg 12415190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 148
Target Start/End: Original strand, 13218359 - 13218453
Alignment:
Q  54 attgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagca 148  Q
    ||||||||||| || |||||||||||||| ||   || || |||| |||||||||||||| |  || |||| ||||||| |||||||||||||||    
T  13218359 attgtataagcttgttgaggttgataatatagtgattccgaactggtctggtgtgatcaataccttatagttctagtcaaaagtttctgttagca 13218453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 24794780 - 24794536
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  24794780 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagaggttacggactgat 24794681  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24794680 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 24794581  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  24794580 ggtttggtgaaccaggataactctcctgtgttattcttctctctc 24794536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 28367887 - 28367643
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  28367887 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagaggttacggactgat 28367788  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28367787 ctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 28367688  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  28367687 ggtttggtgaaccaggataactctcctgtgttattcttctctctc 28367643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 28375705 - 28375461
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  28375705 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagaggttacggactgat 28375606  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28375605 ctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 28375506  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  28375505 ggtttggtgaaccaggataactctcctgtgttattcttctctctc 28375461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 28383527 - 28383283
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  28383527 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagaggttacggactgat 28383428  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28383427 ctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 28383328  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  28383327 ggtttggtgaaccaggataactctcctgtgttattcttctctctc 28383283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 28351954 - 28351710
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||    
T  28351954 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctaaggttgataatacagaggttacggactgat 28351855  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28351854 ctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 28351755  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||    
T  28351754 ggtttggtgaaccagcataactctcctgtgttattcttctctctc 28351710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 38529411 - 38529167
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||| || |||| ||    
T  38529411 ttaatcgttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtagaagcctactgaggttgataatacaagtgtaacagactcat 38529312  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    |||||||||||||||  || ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38529311 ctggtgtgatcaagatcttatagtgctagtcagaaatttctgttagcaagacaactatagtggataatctcacacgaggtgtgggcactggaagtagccg 38529212  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    |||||||||||| | |||||||||||||| | |||| ||||||||    
T  38529211 ggtttggtgaactatgataactctcctgtattattcctctctctc 38529167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 9 - 245
Target Start/End: Original strand, 4951555 - 4951791
Alignment:
Q  9 tttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtg 108  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||| || |||||||||||||||    
T  4951555 tttgagatagaaaatttcaacctttcttttgctagtgtgtaaagaattgtagaaggctgttgaggttgataatacaggtgtaacagactgatctggtgtg 4951654  T
Q  109 atcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggt 208  Q
    | ||| |  |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||| || |||||||    
T  4951655 accaataccttgtagtgctagtcagaaatttctgttagcaagacaaatatagtggataatctcacacgaggtgtgaggacttgaagtagtcgagtttggt 4951754  T
Q  209 gaaccaggataactctcctgtgtgattcttctctctc 245  Q
    |||||| |||||||||| ||||| |||||| ||||||    
T  4951755 gaaccaagataactctcatgtgttattcttatctctc 4951791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 47 - 231
Target Start/End: Original strand, 5385690 - 5385873
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||| ||||||  |||||  |||||||||||||||||||||  || ||||| | || |||||||||| | ||    
T  5385690 gcaaagaattgtagaagcctgctgaggttgatgatacagtggttacatactgatctggtgtgatcaagaccttatagtgttggttagaagtttctatcag 5385789  T
Q  147 caagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgt 231  Q
    |  | | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5385790 ct-gtatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgt 5385873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 47 - 245
Target Start/End: Complemental strand, 13328465 - 13328268
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||||  |  ||||| | || ||||||||||   |     
T  13328465 gcaaagaattgtagaagcttgctgaggttgataatacaagggttacggactgatctggtgtgatcaagacctaatagtgttggttagaagtttct---ac 13328369  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctct 244  Q
    |||  | | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||| |||| |||    
T  13328368 caactgtatactatagtggataatctcacacgaagtgtggggactggaagtagtcgggtttggtgaaccaagataactctcctgtgttattattctttct 13328269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 47 - 245
Target Start/End: Original strand, 23487041 - 23487240
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   |     
T  23487041 gcaaagaattgtagaagcctgctgaggttgataatacaagggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---ac 23487137  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactg--gaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctct 242  Q
    |||  ||| ||||||||||||||||||||||||  |||||||||||  |||||| ||||| |||||||||||||||||||||||||||| |||||||| |    
T  23487138 caactgaatactatagtggataatctcacacgaaatgtggggactgtggaagtaaccgggattggtgaaccaggataactctcctgtgttattcttcttt 23487237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 47 - 245
Target Start/End: Complemental strand, 46305760 - 46305563
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   |     
T  46305760 gcaaagaattgtagaagcctgctgaggttgataatacagtggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---ac 46305664  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattct-tctctc 243  Q
    |||  | | |||| |||||||||||||| |||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||| ||||||    
T  46305663 caactgtatactaaagtggataatctca-acgaagtgtggggactggaagtagccgggtttgatgaaccaagataactctcctgtgttattctctctctc 46305565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 220
Target Start/End: Complemental strand, 17530046 - 17529877
Alignment:
Q  50 aagaattgtataagcctgctgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagca 148  Q
    |||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| | ||| |||||||| ||||||||||||| ||||     
T  17530046 aagaatcgtagaagcctgctgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagc- 17529948  T
Q  149 agaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataa 220  Q
    || | |||||||||||||||||||||||  |||||||||||||| |||||| |||| || ||||||||||||    
T  17529947 aggatactatagtggataatctcacacgtagtgtggggactggacgtagcc-ggttaggcgaaccaggataa 17529877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 32877870 - 32878039
Alignment:
Q  50 aagaattgtataagcctgctgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagca 148  Q
    |||||| ||| ||||||||||||||||||||||||| |||| || |||||||||||||||||||| ||||| ||||| || |||||||||| || |||||    
T  32877870 aagaatcgtagaagcctgctgaggttgataatacagagtgtaacagactgatctggtgtgatcaacaaattatagtgttattcagaagtttatgatagca 32877969  T
Q  149 agaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataa 220  Q
     || | ||||||||||||||||||||||  |||||||||||||| |||||| |||| || ||||||||||||    
T  32877970 tgata-ctatagtggataatctcacacgtagtgtggggactggacgtagcc-ggttaggcgaaccaggataa 32878039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 54624655 - 54624824
Alignment:
Q  50 aagaattgtataagcctgctgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagca 148  Q
    |||||| ||| ||||||||||||||||||||||||| |||| || |||||||||||| ||||||| | ||| |||||||| ||||||||||||| |||||    
T  54624655 aagaatcgtagaagcctgctgaggttgataatacagagtgtaacagactgatctggtatgatcaacatattatagtgctattcagaagtttctgatagca 54624754  T
Q  149 agaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataa 220  Q
     || | ||||||||||||||||||||||  |||||||||||||| |||||| |||| || ||||||||||||    
T  54624755 ggata-ctatagtggataatctcacacgtagtgtggggactggacgtagcc-ggttaggcgaaccaggataa 54624824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 48978670 - 48978835
Alignment:
Q  50 aagaattgtataagcctgctgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagca 148  Q
    |||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| | ||| |||||||| |||||||||||||     |    
T  48978670 aagaatcgtagaagcctgctgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctg-----a 48978764  T
Q  149 agaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataa 220  Q
     | | |||||||||||||||||||||||  |||||||||||||| |||||| |||| || ||||||||||||    
T  48978765 tggatactatagtggataatctcacacgtagtgtggggactggacgtagcc-ggttaggcgaaccaggataa 48978835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 48988210 - 48988375
Alignment:
Q  50 aagaattgtataagcctgctgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagca 148  Q
    |||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| | ||| |||||||| |||||||||||||     |    
T  48988210 aagaatcgtagaagcctgctgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctg-----a 48988304  T
Q  149 agaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataa 220  Q
     | | |||||||||||||||||||||||  |||||||||||||| |||||| |||| || ||||||||||||    
T  48988305 tggatactatagtggataatctcacacgtagtgtggggactggacgtagcc-ggttaggcgaaccaggataa 48988375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 7784194 - 7784091
Alignment:
Q  49 aaagaattgtataagcctgctgaggttgataatacagg-tgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagc 147  Q
    ||||||||||| |||||||||||||||||||||||||| ||| || ||||||||||||||||||||||  || ||||| |||||| ||||||||||||||    
T  7784194 aaagaattgtagaagcctgctgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaccttatagtgttagtcataagtttctgttagc 7784095  T
Q  148 aaga 151  Q
    ||||    
T  7784094 aaga 7784091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 220
Target Start/End: Original strand, 19388809 - 19388936
Alignment:
Q  94 gactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgtta--gcaagaaaactatagtggataatctcacacgaggtgtggggactgg 191  Q
    ||||||| |||||| ||||| || || |||||||| |||||||||| || ||  ||  ||| |||||||| ||||||||||||||| ||||||||||| |    
T  19388809 gactgatatggtgtcatcaacaacttatagtgctattcagaagtttatgatatagct-gaatactatagtcgataatctcacacgaagtgtggggacttg 19388907  T
Q  192 aagtagccgggtttggtgaaccaggataa 220  Q
    |||||||||  ||||||||||||||||||    
T  19388908 aagtagccgattttggtgaaccaggataa 19388936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 49 - 238
Target Start/End: Complemental strand, 4361699 - 4361513
Alignment:
Q  49 aaagaattgtataagcctgctgaggttgataataca-ggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagc 147  Q
    ||||||||| | ||| |||||||||||||||||||| ||||| || || ||||||| |||||||||    ||  | |||| || |||||||| |||||||    
T  4361699 aaagaattgaagaagtctgctgaggttgataatacaaggtgtaacagaatgatctgttgtgatcaat---tttcaatgctggtaagaagtttttgttagc 4361603  T
Q  148 aagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattctt 238  Q
    | || | ||||| |||||||||||||||||||||||| ||| | || || |||| |||  ||||||||||||| |||| ||||| ||||||    
T  4361602 aggata-ctataatggataatctcacacgaggtgtggagaccgaaaataaccggatttaatgaaccaggataaatctcttgtgtcattctt 4361513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 7784066 - 7783984
Alignment:
Q  158 tagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttct 240  Q
    ||||||||||||||||| | |||||||| ||||||||||| | ||||||||||||||| | |  |||||||||| ||||||||    
T  7784066 tagtggataatctcacatgtggtgtgggaactggaagtagtcaggtttggtgaaccagaacagttctcctgtgttattcttct 7783984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 24285493 - 24285537
Alignment:
Q  154 actatagtggataatctcacacgaggtgtggggactggaagtagc 198  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||    
T  24285493 actatagtggataatctcacacgaagtgtagggagtggaagtagc 24285537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 225; Significance: 1e-124; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 31057 - 30813
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31057 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttactgactgat 30958  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30957 ctggtgtgatcaaaatattgtagtgttagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 30858  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  30857 ggtttggtgaaccaggataactctcctgtgttattcttctctctc 30813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 9 - 245
Target Start/End: Original strand, 10006 - 10239
Alignment:
Q  9 tttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtg 108  Q
    ||||||||||||||||| ||| ||| |||| ||||||  |||||||||||| ||||||  ||||||||||||||||||||| || |||||||||||||||    
T  10006 tttgagatagaaaattctaacatttatttttctagtg--caaagaattgtagaagcctattgaggttgataatacaggtgtaacagactgatctggtgtg 10103  T
Q  109 atcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggt 208  Q
    ||| |||  || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||| |||||||    
T  10104 atctagaccttatagtgctagtcagaagtttctgttagcaagacaactatagtggataatctcacacggggtgtggggactggaa-tagccgtgtttggt 10202  T
Q  209 gaaccaggataactctcctgtgtgattcttctctctc 245  Q
    |||||| |||||||||| ||||| ||||  |||||||    
T  10203 gaaccaagataactctcatgtgttattcccctctctc 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 222; Significance: 1e-122; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 94665 - 94420
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  94665 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagaggttacggactgat 94566  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  94565 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 94466  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattct-tctctctc 245  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  94465 ggtttagtgaaccaggataactctcctgtgttattctctctctctc 94420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 104106 - 103861
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  104106 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagaggttacggactgat 104007  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  104006 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaattagccg 103907  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattct-tctctctc 245  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  103906 ggtttggtgaaccaggataactctcctgtgttattctctctctctc 103861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 82272 - 82336
Alignment:
Q  158 tagtggataatctcacacgaggtgtggggactggaagtagccgg-gtttggtgaaccaggataact 222  Q
    ||||||||||||||||||  | |||||||| ||||||||||||| |||||| |||||| |||||||    
T  82272 tagtggataatctcacacttg-tgtggggagtggaagtagccggcgtttggcgaaccacgataact 82336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 408282 - 408526
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||    
T  408282 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgaagaggttgataatacaggtgttacggactaat 408381  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  408382 ctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagacg 408481  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  408482 ggtttggtgaaccaggataactctcctgtgttattcttctctctc 408526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 221; Significance: 1e-122; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 7592960 - 7593204
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7592960 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgatgaggttgataatacaggtgttacggactgat 7593059  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  7593060 ctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaagaaaactataatggataatctcacacgaggtgtggggactggaagtagcca 7593159  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||    
T  7593160 ggtttggtgaaccaggataactctcttgtgttattcttctctctc 7593204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 15174494 - 15174738
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  15174494 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattatataagcctgctgaggttgataatacaggtgtaacggactgat 15174593  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    |||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15174594 ctggtgtgatcaagatcttgtagtgctagtcagaagtttttgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 15174693  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  15174694 ggtttggtgaaccaggataaatctcctgtgttattcttctctctc 15174738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 9 - 228
Target Start/End: Complemental strand, 11634554 - 11634337
Alignment:
Q  9 tttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtat-aagcctgctgaggttgataatacaggtgttacggactgatctggtgt 107  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||  |||||||||||||||||||||||||  |||||  ||||||| |||||    
T  11634554 tttgagatagaaaattccaacctttcttttgctagtg--caaagaattgtaagaagcctgctgaggttgataatacagaggttacaaactgatcgggtgt 11634457  T
Q  108 gatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttgg 207  Q
    ||||||||  || ||||| | || |||||||||||  | |  ||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  11634456 gatcaagacgttatagtgttggttagaagtttctgccaac-tgaatactatagtggataatctcacacgaagtgtggggactggaagtagccggatttgg 11634358  T
Q  208 tgaaccaggataactctcctg 228  Q
    |||||||||||||||||||||    
T  11634357 tgaaccaggataactctcctg 11634337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 47 - 237
Target Start/End: Complemental strand, 14634965 - 14634776
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||  || ||||| | || ||||||||||   ||    
T  14634965 gcaaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccag 14634866  T
Q  147 caagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattct 237  Q
    |  | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14634865 ct-gcatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattct 14634776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 47 - 245
Target Start/End: Complemental strand, 14644665 - 14644467
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||  || ||||| | || ||||||||||   |     
T  14644665 gcaaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---ac 14644569  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattct-tctctc 243  Q
    |||  | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  14644568 caactgcatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattctctctctc 14644469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 47 - 237
Target Start/End: Complemental strand, 33292364 - 33292175
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||  || ||||| | || ||||||||||   |     
T  33292364 gcaaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---ac 33292268  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattct 237  Q
    |||  | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33292267 caactgcatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattct 33292175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 47 - 245
Target Start/End: Complemental strand, 15947560 - 15947362
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||  || ||||| | || ||||||||||   |     
T  15947560 gcaaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---ac 15947464  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattct-tctctc 243  Q
    |||  | | |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  15947463 caactgcatactatagtggataatctcacacgaagtgtggtgactggaagtagccgggtttggtgaaccaggataactctcctgtgttattctctctctc 15947364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 48 - 245
Target Start/End: Original strand, 32817997 - 32818193
Alignment:
Q  48 caaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagc 147  Q
    |||| ||||||| |||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||  || ||||| | || ||||||||||   | |    
T  32817997 caaaaaattgtagaagcctgcggaggttgataatacaggggttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---acc 32818093  T
Q  148 aa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||  ||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  32818094 aactgaatactatagtggataatctcacacgaagtgtggggaccggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttctttctc 32818193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 47 - 245
Target Start/End: Original strand, 9736946 - 9737143
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||| |||||||||||||||||||||   || ||||| | || ||||||||||   |     
T  9736946 gcaaagaattgtagaagcctgctgaggttgataatacaggggctacagactgatctggtgtgatcaaggccttatagtgttggttagaagtttctacaaa 9737045  T
Q  147 caagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    |  ||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||    
T  9737046 ct-gaatactataatggataatctcacacgaagtgtggggactggaagtagccgggtttagtgaaccaggataactctcctgtgttattcttctttctc 9737143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 49 - 229
Target Start/End: Complemental strand, 19352775 - 19352595
Alignment:
Q  49 aaagaattgtataagcctgctgaggttgataatacagg-tgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagc 147  Q
    |||||| |||| ||||||| ||||||| |||||||||| ||| |||||  ||||||||||||||| ||| || |||| | ||||||||||||||||||||    
T  19352775 aaagaagtgtagaagcctgatgaggttcataatacagggtgtaacggaaagatctggtgtgatcaggaatttatagtacaagtcagaagtttctgttagc 19352676  T
Q  148 aagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgt 229  Q
    | || | ||||||||||||||||||||||| ||||| ||||||||||||||||  ||||||||||||| |||||||||||||    
T  19352675 aggaga-ctatagtggataatctcacacgaagtgtgaggactggaagtagccgaatttggtgaaccagtataactctcctgt 19352595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 84 - 245
Target Start/End: Original strand, 13874423 - 13874582
Alignment:
Q  84 aggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtg 181  Q
    |||||||  |||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  |||||||||||||||||||||||||||| |||    
T  13874423 aggtgttctggactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaaaactatagtggataatctcacacgaagtg 13874519  T
Q  182 tggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    |||||||||||||||| ||| || |||||||||||||||||||||||||| |||  ||||||||    
T  13874520 tggggactggaagtag-cggattgggtgaaccaggataactctcctgtgttatttctctctctc 13874582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 48710121 - 48710004
Alignment:
Q  121 tagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtgggg-actggaagtagccgggtttggtgaaccaggata 219  Q
    |||||||||| ||||||||||  ||||  ||| |||||||||||||||||||||||| |||||||| |||||||||| ||| |||||||||||||| |||    
T  48710121 tagtgctagttagaagtttctactagct-gaatactatagtggataatctcacacgaagtgtgggggactggaagtatccgagtttggtgaaccagaata 48710023  T
Q  220 actctcctgtgtgattctt 238  Q
     ||||||||||| ||||||    
T  48710022 tctctcctgtgttattctt 48710004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 234
Target Start/End: Complemental strand, 4306739 - 4306559
Alignment:
Q  53 aattgtataagcctgctgaggttgataatacag-gtgtta-cggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaag 150  Q
    ||||||| ||| ||||||||||||||||||||| |||| | |||||||||||||||||||||| ||  |  ||||||| ||| ||||||||| |||   |    
T  4306739 aattgtagaagtctgctgaggttgataatacagagtgtaatcggactgatctggtgtgatcaacaacat--agtgctattcataagtttctgatagttgg 4306642  T
Q  151 aaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgat 234  Q
    | | ||||||| || |||||||| ||| ||||||| |||||||||||| || |||||||||| ||||||| |||  ||||||||    
T  4306641 ata-ctatagtagaaaatctcactcgaagtgtgggaactggaagtagctggctttggtgaactaggataaatcttttgtgtgat 4306559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 48711469 - 48711401
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaaga 115  Q
    |||||||||| || ||||||| |||||||||||||||| ||||| || |||||| ||||||||||||||    
T  48711469 gcaaagaattatagaagcctgttgaggttgataatacatgtgttccgaactgatatggtgtgatcaaga 48711401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 607218 - 607282
Alignment:
Q  158 tagtggataatctcacacgaggtgtggggactggaagtagccgg-gtttggtgaaccaggataact 222  Q
    ||||||||||||||||||  | |||||||| ||||||||||||| |||||| |||||| |||||||    
T  607218 tagtggataatctcacacttg-tgtggggagtggaagtagccggcgtttggcgaaccacgataact 607282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 616313 - 616377
Alignment:
Q  158 tagtggataatctcacacgaggtgtggggactggaagtagccgg-gtttggtgaaccaggataact 222  Q
    ||||||||||||||||||  | |||||||| ||||||||||||| |||||| |||||| |||||||    
T  616313 tagtggataatctcacacttg-tgtggggagtggaagtagccggcgtttggcgaaccacgataact 616377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 245
Target Start/End: Original strand, 13951987 - 13952074
Alignment:
Q  158 tagtggataatctcacacgaggtgtggggactggaagtagccgg-gtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||||||||||  | |||||||| ||||||||||||| |||||  |||| | ||||||| || ||||| ||| |||||||||    
T  13951987 tagtggataatctcacacttg-tgtggggagtggaagtagccggcgtttgacgaacaacgataactttcgtgtgtcatttttctctctc 13952074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 3487 - 3726
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  3487 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagaggttacagactgat 3586  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3587 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagacaactatagtggataatctcacacgaggtgtggggactggaagtagccg 3686  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttct 240  Q
    ||||||||||||||| |||| |||||||||| ||||||||    
T  3687 ggtttggtgaaccagaataattctcctgtgttattcttct 3726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 7789312 - 7789073
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  7789312 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacagaggttacagactgat 7789213  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7789212 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagacaactatagtggataatctcacacgaggtgtggggactggaagtagccg 7789113  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttct 240  Q
    ||||||||||||||| |||| |||||||||| ||||||||    
T  7789112 ggtttggtgaaccagaataattctcctgtgttattcttct 7789073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 20714023 - 20714267
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||    
T  20714023 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtagaagcctgctgaggttgataatacaggtgtaacagactgat 20714122  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    |||||||||||||||  || ||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||    
T  20714123 ctggtgtgatcaagatcttatagtgctagtcagaagtttctgttagcaagacaactataatggataatgtcacacgaggtgtggggactggaagtagccg 20714222  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||    
T  20714223 ggtttggtgaaccaggataactctcatgtgttattcttctctctc 20714267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 18883384 - 18883164
Alignment:
Q  9 tttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtat-aagcctgctgaggttgataatacaggtgttacggactgatctggtgt 107  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||  |||||||||||||||||||||||||  | |||| |||||||||||||    
T  18883384 tttgagatagaaaattccaacctttcttttgctagtg--caaagaattgtaagaagcctgctgaggttgataatacagagggtacgaactgatctggtgt 18883287  T
Q  108 gatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggttt 205  Q
    ||||||||  || ||||| | || |||| |||||   | |||  ||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  18883286 gatcaagactttatagtgttggttagaattttct---accaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccggattt 18883190  T
Q  206 ggtgaaccaggataactctcctgtgt 231  Q
    ||||||||||||||||||||||||||    
T  18883189 ggtgaaccaggataactctcctgtgt 18883164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 237
Target Start/End: Complemental strand, 18143653 - 18143427
Alignment:
Q  9 tttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtat-aagcctgctgaggttgataatacaggtgttacggactgatctggtgt 107  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||  |||||| ||||||||||||||||| | ||||| ||||||||||||||    
T  18143653 tttgagatagaaaattccaacctttcttttgctagtg--caaagaattgtaagaagcctactgaggttgataatacaagggttacagactgatctggtgt 18143556  T
Q  108 gatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggttt 205  Q
    ||||||||  || ||||| | || ||||||||   ||| |||  |||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  18143555 gatcaagaccttatagtgttggttagaagttt---ttaccaactgaatgctatagtggataatctcacacgaagtgtggggactggaagtagccggattt 18143459  T
Q  206 ggtgaaccaggataactctcctgtgtgattct 237  Q
    ||||||||| |||||||||||||||| |||||    
T  18143458 ggtgaaccaagataactctcctgtgttattct 18143427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 47 - 245
Target Start/End: Complemental strand, 42712365 - 42712168
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||  || ||||| | || ||||||||||   |     
T  42712365 gcaaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---ac 42712269  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctct 244  Q
    |||  | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  42712268 caactgcatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttctttct 42712169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 228
Target Start/End: Original strand, 18232890 - 18233107
Alignment:
Q  9 tttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtat-aagcctgctgaggttgataatacaggtgttacggactgatctggtgt 107  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||  || ||||||||||||||||||||||  |||||  ||||||| |||||    
T  18232890 tttgagatagaaaattccaacctttcttttgctagtg--caaagaattgtaagaatcctgctgaggttgataatacagaggttacaaactgatcgggtgt 18232987  T
Q  108 gatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttgg 207  Q
    ||||||||  |||||||| |  | |||||||||||  | |  ||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  18232988 gatcaagacgttgtagtgttgattagaagtttctgccaact-gaatactatagtggataatctcacacgaagtgtggggactggaagtagccggatttgg 18233086  T
Q  208 tgaaccaggataactctcctg 228  Q
    |||||||||||||||||||||    
T  18233087 tgaaccaggataactctcctg 18233107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 228
Target Start/End: Original strand, 18242341 - 18242558
Alignment:
Q  9 tttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtat-aagcctgctgaggttgataatacaggtgttacggactgatctggtgt 107  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||  || ||||||||||||||||||||||  |||||  ||||||| |||||    
T  18242341 tttgagatagaaaattccaacctttcttttgctagtg--caaagaattgtaagaatcctgctgaggttgataatacagaggttacaaactgatcgggtgt 18242438  T
Q  108 gatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttgg 207  Q
    ||||||||  |||||||| |  | |||||||||||  | |  ||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  18242439 gatcaagacgttgtagtgttgattagaagtttctgccaact-gaatactatagtggataatctcacacgaagtgtggggactggaagtagccggatttgg 18242537  T
Q  208 tgaaccaggataactctcctg 228  Q
    |||||||||||||||||||||    
T  18242538 tgaaccaggataactctcctg 18242558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 25051287 - 25051067
Alignment:
Q  9 tttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtat-aagcctgctgaggttgataatacaggtgttacggactgatctggtgt 107  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||  |||||||||||||||||||||||||  ||||| ||||||||||||||    
T  25051287 tttgagatagaaaattccaacctttcttttgctagtg--caaagaattgtaagaagcctgctgaggttgataatacagaggttacagactgatctggtgt 25051190  T
Q  108 gatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggttt 205  Q
    |||||||| ||| ||||| | || |||||||||   || |||  ||| |||||||||||||||||||||||| ||||||||||||||||||||| | ||     
T  25051189 gatcaagacattatagtgttggttagaagtttc---taccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccagattg 25051093  T
Q  206 ggtgaaccaggataactctcctgtgt 231  Q
    ||||||||| |||||||||| |||||    
T  25051092 ggtgaaccaagataactctcttgtgt 25051067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 228
Target Start/End: Original strand, 18251792 - 18252009
Alignment:
Q  9 tttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgt-ataagcctgctgaggttgataatacaggtgttacggactgatctggtgt 107  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||| | || ||||||||||||||||||||||  |||||  ||||||| |||||    
T  18251792 tttgagatagaaaattccaacctttcttttgcta--gtgcaaagaattgtaagaatcctgctgaggttgataatacagaggttacaaactgatcgggtgt 18251889  T
Q  108 gatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttgg 207  Q
    ||||||||  || ||||| | || |||||||||||  | |  ||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  18251890 gatcaagacgttatagtgttggttagaagtttctgccaac-tgaatactatagtggataatctcacacgaagtgtggggactggaagtagccggatttgg 18251988  T
Q  208 tgaaccaggataactctcctg 228  Q
    |||| ||||||||||||||||    
T  18251989 tgaatcaggataactctcctg 18252009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 25037250 - 25037030
Alignment:
Q  9 tttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtat-aagcctgctgaggttgataatacaggtgttacggactgatctggtgt 107  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||  |||||||||||||||||||||||||  ||||| ||||||||||||||    
T  25037250 tttgagatagaaaattccaacctttcttttgctagtg--caaagaattgtaagaagcctgctgaggttgataatacagaggttacagactgatctggtgt 25037153  T
Q  108 gatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggttt 205  Q
    ||||||||  || ||||| | || |||||||||   || |||  ||| |||||||||||||||||||||||| ||||||||||||||||||||| | ||     
T  25037152 gatcaagactttatagtgttggttagaagtttc---taccaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccagattg 25037056  T
Q  206 ggtgaaccaggataactctcctgtgt 231  Q
    ||||||||| |||||||||| |||||    
T  25037055 ggtgaaccaagataactctcttgtgt 25037030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 47 - 245
Target Start/End: Original strand, 20030179 - 20030376
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||  || ||||| | || |||||||| |   |     
T  20030179 gcaaagaattgtagaagcctgctgaggttgataatacagggattacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttat---ac 20030275  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctct 244  Q
    |||  | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||    
T  20030276 caactgtatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcttgtgttattcttctttct 20030375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 47 - 245
Target Start/End: Original strand, 20044818 - 20045015
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  || ||||| | || ||||||||||   |     
T  20044818 gcaaagaattgtagaagcctgctgaggttgataatacaggggttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---ac 20044914  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctct 244  Q
    |||  | | ||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||| |||    
T  20044915 caactgtatactatcgtggataatctcacacgaagtgtggggactggatgtagccgggtttggtgaaccaggataactctcatgtgttattcttctttct 20045014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 50 - 231
Target Start/End: Complemental strand, 31575595 - 31575415
Alignment:
Q  50 aagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa 149  Q
    |||||||||| |||| ||||||||||||||||||||| |||  |||||||| ||||||||||||||  || |||||||||| ||||||||||  ||||      
T  31575595 aagaattgtagaagcttgctgaggttgataatacaggggttctggactgatttggtgtgatcaagaccttatagtgctagttagaagtttctactagct- 31575497  T
Q  150 gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgt 231  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  31575496 gaatactatagtggataatctcacacgaagtgtggggactggaagtagccggatttggtgaaccaggataactctcttgtgt 31575415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 48 - 245
Target Start/End: Original strand, 12925355 - 12925552
Alignment:
Q  48 caaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagc 147  Q
    |||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||  || ||||| | || ||||||||||   | |    
T  12925355 caaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---acc 12925451  T
Q  148 aa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattct-tctctct 244  Q
    ||  | | |||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||| |||||||    
T  12925452 aactgcatactatagtggataatctcacacgaagtgtggggactggaagtagtcgggtttcgtgaaccaggataactctcctgtgttattctctctctct 12925551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 47 - 245
Target Start/End: Original strand, 12767631 - 12767830
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  || ||||| | || |||||||||   ||     
T  12767631 gcaaagaattgtagaagcctgctgaggttgataatacaggggttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttc---tac 12767727  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggac--tggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctct 242  Q
    |||  ||| ||||||||||||||||||||||||  |||||||||  |||||||| ||||| |||||||||||||||||||||||||||| |||||||| |    
T  12767728 caactgaatactatagtggataatctcacacgaaatgtggggactgtggaagtaaccgggattggtgaaccaggataactctcctgtgttattcttcttt 12767827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 9 - 237
Target Start/End: Complemental strand, 4843948 - 4843720
Alignment:
Q  9 tttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtat-aagcctgctgaggttgataata--caggtgttacggactgatctggt 105  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| ||||||||||||||  || | ||||| ||||||||||||    
T  4843948 tttgagatagaaaattccaacctttcttttgctagtg--caaagaattgtaagaagcctgatgaggttgataatatacaagggttacagactgatctggt 4843851  T
Q  106 gtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggt 203  Q
    ||||||||||  || ||||  | || |||| |||||   | |||  ||| |||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  4843850 gtgatcaagaccttatagtcttggttagaaatttct---accaactgaatactatagtggataatctcacacgaagtgtggggactggaagtagccggat 4843754  T
Q  204 ttggtgaaccaggataactctcctgtgtgattct 237  Q
    || ||||||||||||||||||||| ||| |||||    
T  4843753 ttagtgaaccaggataactctcctttgttattct 4843720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 84 - 245
Target Start/End: Complemental strand, 33601923 - 33601763
Alignment:
Q  84 aggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtg 183  Q
    |||||||  |||||||||| ||||||||||||  || ||||| | ||||||||||||||| | |  |||||||||||||||||||||||||||| |||||    
T  33601923 aggtgttctggactgatctagtgtgatcaagaccttatagtgttggtcagaagtttctgtcaact-gaaaactatagtggataatctcacacgaagtgtg 33601825  T
Q  184 gggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    |||||||||||||||||| || |||||||||||||||||||||||||| ||| |||||||||    
T  33601824 gggactggaagtagccggattgggtgaaccaggataactctcctgtgttatttttctctctc 33601763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 84 - 245
Target Start/End: Complemental strand, 33592284 - 33592124
Alignment:
Q  84 aggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtg 183  Q
    |||||||  |||||||||| ||||||||||||  || ||||| | ||||||||||||||| | |  |||||||||||||||||||||||||||| |||||    
T  33592284 aggtgttctggactgatctagtgtgatcaagaccttatagtgttggtcagaagtttctgtcaact-gaaaactatagtggataatctcacacgaagtgtg 33592186  T
Q  184 gggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    |||||||||||||||||| || |||||||||||||||||||||||||| |||  ||||||||    
T  33592185 gggactggaagtagccggattgggtgaaccaggataactctcctgtgttatttctctctctc 33592124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 48 - 231
Target Start/End: Complemental strand, 24096262 - 24096079
Alignment:
Q  48 caaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagc 147  Q
    |||||||||| | |||  || |||||||||||||||| |    | |||||||| |||||| |||||||| ||||||||||||||| |||||| |||||||    
T  24096262 caaagaattgaagaagtttgttgaggttgataatacaaggaaaatggactgatatggtgtaatcaagaacttgtagtgctagtcaaaagtttatgttagc 24096163  T
Q  148 aagaaaactatagtggataatctcacacgaggtgt-ggggactggaagtagccgggtttggtgaaccaggataactctcctgtgt 231  Q
    ||| | ||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||| |||| ||||||||||    
T  24096162 aag-atactatagtggataatctcacacgaggtgtgggggactggaagtagtcgagtttggtgaaccagaataaatctcctgtgt 24096079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 12915500 - 12915657
Alignment:
Q  88 gttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtggg 185  Q
    ||||||||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  | | |||||||||||||||||||||||| |||||||    
T  12915500 gttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgcatactatagtggataatctcacacgaagtgtggg 12915596  T
Q  186 gactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattct-tctctctc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  12915597 gactggaagtagccgggtttggtgaaccaggataactctcctgtgttattctctctctctc 12915657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 47 - 231
Target Start/End: Original strand, 15833950 - 15834134
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggt-gttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgtta 145  Q
    ||||||||||||| || ||| |||| ||||||||||||||  || ||| ||| ||||||| || ||||||| || |||||||||||||||||||| ||||    
T  15833950 gcaaagaattgtagaaacctactgatgttgataatacagggagtaacgaacttatctggtatggtcaagaacttatagtgctagtcagaagtttcagtta 15834049  T
Q  146 gcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgt 231  Q
    ||| || | ||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||||||| ||||| |||| |||||    
T  15834050 gcatgata-ctataatggataatctcacacgaggtgtgtggactgaaagtagccggatttggtgaaccaagataaatctcttgtgt 15834134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 88 - 225
Target Start/End: Original strand, 24634009 - 24634145
Alignment:
Q  88 gttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtgggga 187  Q
    |||| |||||||||||||||||||||||  || |||||||||| ||||||||||  ||||  ||| ||||||||||||||| |||||||| |||||||||    
T  24634009 gttatggactgatctggtgtgatcaagaccttatagtgctagttagaagtttctactagct-gaatactatagtggataatatcacacgaagtgtgggga 24634107  T
Q  188 ctggaagtagccgggtttggtgaaccaggataactctc 225  Q
    |||||||||| ||||||||  |||||||||||||||||    
T  24634108 ctggaagtagtcgggtttgaggaaccaggataactctc 24634145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 20714417 - 20714484
Alignment:
Q  170 tcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattct 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  20714417 tcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcatgtgttattct 20714484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 210
Target Start/End: Complemental strand, 42896299 - 42896174
Alignment:
Q  84 aggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtg 183  Q
    |||||||  |||||||||||||||||||||||  || ||||| | || |||||||||| | | |  |||| ||||||||||||||||||||||| |||||    
T  42896299 aggtgttctggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctatcaact-gaaatctatagtggataatctcacacgaagtgtg 42896201  T
Q  184 gggactggaagtagccgggtttggtga 210  Q
    | |||||||||||||||| || |||||    
T  42896200 gagactggaagtagccggattgggtga 42896174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 26194106 - 26194049
Alignment:
Q  174 acgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgt 231  Q
    |||| ||||||||||| |||||||  ||||||| |||||||||||||||||| |||||    
T  26194106 acgaagtgtggggactagaagtagttgggtttgatgaaccaggataactctcatgtgt 26194049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 201; Significance: 1e-110; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 5 - 245
Target Start/End: Complemental strand, 31710696 - 31710456
Alignment:
Q  5 tagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctgg 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  31710696 tagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtagaagtctgctgaggttgataatacaggtgtaacggactgatctgg 31710597  T
Q  105 tgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtt 204  Q
    |||||||||||  || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31710596 tgtgatcaagatcttatagtgctagtcagaagtttctgttagcaagacaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtt 31710497  T
Q  205 tggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    |||||||| |||||||||||| ||||| |||||||||||||    
T  31710496 tggtgaacaaggataactctcatgtgttattcttctctctc 31710456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 24022976 - 24022732
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgat 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  24022976 ttaatagttttgagatagaaaatttcaaccttccttttgctagtgtgcaaagaattgtagaagcctgttgaggttgataatacaggtgtaacggactgat 24022877  T
Q  101 ctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccg 200  Q
    |||||||||||||||  || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||    
T  24022876 ctggtgtgatcaagatcttatagtgctagtcagaagtttctgttagcaagacaactatagtggataatctcacacgaggtgtgggaattggaagtagccg 24022777  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    |||||||||||| |||||||||||||  ||| |||||||||||||    
T  24022776 ggtttggtgaacgaggataactctccaatgttattcttctctctc 24022732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 14273170 - 14273397
Alignment:
Q  13 agatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatca 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| || ||||||| ||||||||| |    
T  14273170 agatagaaaattccaacatttcttttgctagtgtgcaaagaattgtagaagcctgctgaggttgataatataggtgtaacagactgatatggtgtgatta 14273269  T
Q  113 agaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaac 212  Q
    |||  || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  14273270 agatcttatagtgctagtcagaagtttctgttagcaagacaactatagtggataatctcacacgaggtgtggagactgaaagtagccgggtttggtgaac 14273369  T
Q  213 caggataactctcctgtgtgattcttct 240  Q
    |||||||| |||| ||||| ||||||||    
T  14273370 caggataattctcgtgtgttattcttct 14273397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 47 - 238
Target Start/End: Original strand, 35877516 - 35877706
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||  |||||| |||||||||||||||||||||  || ||||| | || ||||||||||   |     
T  35877516 gcaaagaattgtagaagcctgctgaggttgataatacagtggttacgaactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---ac 35877612  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattctt 238  Q
    |||  | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  35877613 caactgcatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctatgttattctt 35877706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 47 - 238
Target Start/End: Original strand, 35885005 - 35885195
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||  |||||| |||||||||||||||||||||  || ||||| | || ||||||||||   |     
T  35885005 gcaaagaattgtagaagcctgctgaggttgataatacagtggttacgaactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---ac 35885101  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattctt 238  Q
    |||  | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  35885102 caactgcatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctatgttattctt 35885195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 47 - 238
Target Start/End: Original strand, 36724718 - 36724908
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||  |||||| |||||||||||||||||||||  || ||||| | || ||||||||||   |     
T  36724718 gcaaagaattgtagaagcctgctgaggttgataatacagtggttacgaactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---ac 36724814  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattctt 238  Q
    |||  | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  36724815 caactgcatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctatgttattctt 36724908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 1800493 - 1800662
Alignment:
Q  50 aagaattgtataagcctgctgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagca 148  Q
    |||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| | ||| |||||||| ||||||||||||| ||||     
T  1800493 aagaatcgtagaagcctgctgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagc- 1800591  T
Q  149 agaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataa 220  Q
    || | |||||||||||||||||||||||  |||||||||||||| |||||| |||| || ||||||||||||    
T  1800592 aggatactatagtggataatctcacacgtagtgtggggactggacgtagcc-ggttaggcgaaccaggataa 1800662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 22632402 - 22632571
Alignment:
Q  50 aagaattgtataagcctgctgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagca 148  Q
    |||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| | ||| ||||| |||||||||||||||| ||||     
T  22632402 aagaatcgtagaagcctgctgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgttagtcagaagtttctgatagc- 22632500  T
Q  149 agaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataa 220  Q
    || | |||||||||||||||||||||||  |||||||||||||| |||||| |||| || ||||||||||||    
T  22632501 aggatactatagtggataatctcacacgtagtgtggggactggacgtagcc-ggttaggcgaaccaggataa 22632571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 231
Target Start/End: Original strand, 3396923 - 3397106
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    |||||||||| || ||| ||||||||||||||||||||   ||||||||||||||||||||||||||||  || ||||| | || ||||||||||   |     
T  3396923 gcaaagaattttagaagtctgctgaggttgataatacaatggttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---ac 3397019  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgt 231  Q
    |||  | | |||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  3397020 caactgtatactatagtggataatctcacacgaagtgtggggactagaagtagctgggtttggtgaaccatgataactctcctgtgt 3397106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 1790999 - 1791164
Alignment:
Q  50 aagaattgtataagcctgctgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagca 148  Q
    |||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| | ||| |||||||| |||||||||||||     |    
T  1790999 aagaatcgtagaagcctgctgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctg-----a 1791093  T
Q  149 agaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataa 220  Q
     | | |||||||||||||||||||||||  |||||||||||||| |||||| |||| || ||||||||||||    
T  1791094 tggatactatagtggataatctcacacgtagtgtggggactggacgtagcc-ggttaggcgaaccaggataa 1791164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 18578707 - 18578877
Alignment:
Q  69 tgaggttgataatacagg-tgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 167  Q
    |||||||||||||||||| ||| || || || |||||||| |||||||| || |||| ||||||| ||||||||||||| | || |  ||  ||| ||||    
T  18578707 tgaggttgataatacagggtgtaacagattggtctggtgttatcaagaacttatagtcctagtcaaaagtttctgttaggaggatat-tactgtgaataa 18578805  T
Q  168 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttc 239  Q
    |||||||| |||||||||||||| |||||| |||||||| |||||  |||||| |||| ||||| |||||||    
T  18578806 tctcacacaaggtgtggggactgaaagtagtcgggtttgatgaacatggataaatctcatgtgttattcttc 18578877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 16446670 - 16446739
Alignment:
Q  154 actatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactc 223  Q
    ||||||||||||||||||||||||  ||||||||||| |||||| ||| ||| |||| ||||||||||||    
T  16446670 actatagtggataatctcacacgaaatgtggggactgaaagtagtcggatttagtgatccaggataactc 16446739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 29911278 - 29911353
Alignment:
Q  165 taatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttct 240  Q
    ||||||||||||||||| |||||||||||| ||| || |||||| ||||| ||||| |||| ||||| ||||||||    
T  29911278 taatctcacacgaggtgaggggactggaagcagctggatttggttaaccatgataaatctcatgtgttattcttct 29911353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 2e-70; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 47 - 240
Target Start/End: Complemental strand, 5378613 - 5378419
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacagg-tgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgtta 145  Q
    ||||||||||||| ||| ||||||||||| |||||| ||| ||| || ||||||||||||||||||||||  || |||||||||| ||||||||||||||    
T  5378613 gcaaagaattgtagaagtctgctgaggtttataatatagggtgtaacagactgatctggtgtgatcaagaccttatagtgctagttagaagtttctgtta 5378514  T
Q  146 gcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttct 240  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  5378513 gcaagacaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataattctcctgtgttattcttct 5378419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 15810208 - 15809966
Alignment:
Q  9 tttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtg 108  Q
    ||||||||||||||||||||||||||||||||| ||   |||||||||||| |||| ||| || ||||||||||||||||| ||||||||||||||||||    
T  15810208 tttgagatagaaaattccaacctttcttttgctggtt--caaagaattgtagaagcatgccgaagttgataatacaggtgtaacggactgatctggtgtg 15810111  T
Q  109 atcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtgggga--------ctggaagtagccg 200  Q
    |||||||  || |||||||| |||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||        |||||||||| ||    
T  15810110 atcaagaccttatagtgctactcagaagtttctgttaccaagataattatagtggataatctcacacgaggtgtggggactcgaactctggaagtagtcg 15810011  T
Q  201 ggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    | |||||||||||||||||| |||| ||||| ||| |||||||||    
T  15810010 gatttggtgaaccaggataattctcttgtgttattattctctctc 15809966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 47 - 245
Target Start/End: Complemental strand, 40999224 - 40999025
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataataca-ggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgtta 145  Q
    ||||||||||||| ||| ||| |||||||||||||||| ||||| ||  ||||||||||||||||||| |  || |||||||||||| ||||||| ||||    
T  40999224 gcaaagaattgtagaagtctgttgaggttgataatacatggtgtaacaaactgatctggtgtgatcaaaaccttatagtgctagtcataagtttccgtta 40999125  T
Q  146 gcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||  ||||| |||| ||||||||    
T  40999124 gcaagacaactatagtggataatctcacacgaggtgtggggactggaagttgtcgggtttggtgaaccaggataactcttatgtgttattcctctctctc 40999025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 47 - 237
Target Start/End: Complemental strand, 14272205 - 14272016
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||  || ||||| | || ||||||||||   |     
T  14272205 gcaaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctggtgtgatcaagaccttatagtgtttgttagaagtttct---ac 14272109  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattct 237  Q
    |||  | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14272108 caactgcatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattct 14272016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 47 - 231
Target Start/End: Complemental strand, 14282071 - 14281888
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||  || ||||| | || ||||||||||   |     
T  14282071 gcaaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctggtgtgatcaagaccttatagtgtttgttagaagtttct---ac 14281975  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgt 231  Q
    |||  | | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14281974 caactgcatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgt 14281888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 50 - 240
Target Start/End: Complemental strand, 26906431 - 26906241
Alignment:
Q  50 aagaattgtataagcctgctgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagca 148  Q
    |||||||||| ||| ||||||||||||||||||||| |||| || |||||||||||||||| |||||| || ||||||||||||||||||||||||| ||    
T  26906431 aagaattgtaaaagtctgctgaggttgataatacagagtgtaacagactgatctggtgtgaccaagaacttatagtgctagtcagaagtttctgttaaca 26906332  T
Q  149 agaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttct 240  Q
    ||| |  |||| |||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||| |||| ||||| ||||||||    
T  26906331 agatat-tataatggataatctcacacgaggtatggggactagaagtagcctggtttggtgaaccaggataaatctcgtgtgttattcttct 26906241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 61 - 240
Target Start/End: Original strand, 21633594 - 21633772
Alignment:
Q  61 aagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatag 160  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||| |||||  || || ||||||||||||||||||  |||  |||| |||||||    
T  21633594 aagcctgctgaggttgataatacagttgttccggactgatctggtgtgaccaagaccttataatgctagtcagaagtttctactag-tagaatactatag 21633692  T
Q  161 tggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttct 240  Q
    ||||||||||||||  | ||||||||||| || |||||||||||||||||||||| |||  | || ||||| ||||||||    
T  21633693 tggataatctcacaaaaagtgtggggactagacgtagccgggtttggtgaaccagaatatttatcttgtgttattcttct 21633772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 47 - 223
Target Start/End: Complemental strand, 3471124 - 3470949
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||  || || || | || |||||||||   ||     
T  3471124 gcaaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctggtgtgatcaagaccttataatgttggttagaagtttc---tac 3471028  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactc 223  Q
    |||  | | |||| |||||||||||||||| || |||||||| ||||||||| ||||||||||||||||||||||||||    
T  3471027 caattgtatactacagtggataatctcacatgaagtgtgggggctggaagtaaccgggtttggtgaaccaggataactc 3470949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 84 - 245
Target Start/End: Complemental strand, 21919581 - 21919421
Alignment:
Q  84 aggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtg 181  Q
    |||||||  |||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  |||||||||||||||||||||||||||| |||    
T  21919581 aggtgttctggactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgaaaactatagtggataatctcacacgaagtg 21919485  T
Q  182 tggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    |||||||||||||||||||| || |||||| ||||||||||||||||||| |||  ||||||||    
T  21919484 tggggactggaagtagccggattgggtgaatcaggataactctcctgtgttatttctctctctc 21919421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 197
Target Start/End: Original strand, 30676788 - 30676938
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgtta 145  Q
    |||||||||| ||||||  || |||| |||||||||||| |||| || ||||||||| |||||||||||||  | |||||||| ||| ||||||||  ||    
T  30676788 gcaaagaattatataagtatgttgagattgataatacagagtgtaacagactgatcttgtgtgatcaagaacatatagtgctattcataagtttcttata 30676887  T
Q  146 gcaagaaaactatagtggataatctcacacgaggtgtggggactggaagtag 197  Q
    ||  ||| | | || ||||||||||||||||| |||||||||||| ||||||    
T  30676888 gc-tgaatattgtaatggataatctcacacgaagtgtggggactgaaagtag 30676938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 231
Target Start/End: Complemental strand, 28310155 - 28310019
Alignment:
Q  91 acggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtggggactg 190  Q
    ||||||||||||||||||||||| || || ||||| || || ||||||| || |||| || | ||||||||||||||   ||||||  ||||||  || |    
T  28310155 acggactgatctggtgtgatcaacaacttatagtgttattcggaagtttttgatagc-aggatactatagtggataa--ccacacgtagtgtggaaaccg 28310059  T
Q  191 gaagtagccgggtttggtgaaccaggataactctcctgtgt 231  Q
    ||||||||| |||| |||||| |||||||| |||| |||||    
T  28310058 gaagtagcc-ggttaggtgaatcaggataaatctcttgtgt 28310019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 9 - 231
Target Start/End: Original strand, 256921 - 257141
Alignment:
Q  9 tttgagatagaaaattccaacctttcttttgctagtgtgcaaagaattgtat-aagcctgctgaggttgataatacaggtgttacggactgatctggtgt 107  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||  |||| ||||||||||||||||||||  |||||| |||||||||||||    
T  256921 tttgagatagaaaattccaacctttcttttgctagtg--caaagaattgtaagaagcttgctgaggttgataatacagaggttacgaactgatctggtgt 257018  T
Q  108 gatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggttt 205  Q
    ||||||||  || ||||| | || |||||||||   || |||  ||| ||||||||||||||| |||||||| ||||||||||||||||||||||| |||    
T  257019 gatcaagactttatagtgttggttagaagtttc---taccaactgaatactatagtggataatttcacacgaagtgtggggactggaagtagccggattt 257115  T
Q  206 ggtgaaccaggataactctcctgtgt 231  Q
    ||||||||||||||||||||||||||    
T  257116 ggtgaaccaggataactctcctgtgt 257141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 47 - 245
Target Start/End: Original strand, 2109 - 2306
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||  || ||||| | || |||||||| |   |     
T  2109 gcaaagaattgtagaagcctgctgaggttgataatacagggattacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttat---ac 2205  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctct 244  Q
    |||  | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||    
T  2206 caactgtatactatagtggataatctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcttgtgttattcttctttct 2305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 100; Significance: 1e-49; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 47 - 245
Target Start/End: Original strand, 124047 - 124244
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttag 146  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||  || ||||| | || ||||||||||   |     
T  124047 gcaaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---ac 124143  T
Q  147 caa--gaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctct 244  Q
    |||  | | |||||||||||||||||||||||| |||||||||||||||||| | || |||| |||||||||||||||||||||||| |||||||| |||    
T  124144 caactgcatactatagtggataatctcacacgaagtgtggggactggaagtaacaggatttgatgaaccaggataactctcctgtgttattcttctttct 124243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 220
Target Start/End: Original strand, 100002 - 100152
Alignment:
Q  69 tgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 167  Q
    ||||||||||||||||| |||| || ||||||| |||||||||||| | ||| |||||||| ||||||||||||| |||| || | |||||| |||||||    
T  100002 tgaggttgataatacagagtgtaacagactgatttggtgtgatcaacatattatagtgctattcagaagtttctgatagc-aggatactataatggataa 100100  T
Q  168 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataa 220  Q
    |||||||||  ||||||||||||||  ||||| |||| || ||||||||||||    
T  100101 tctcacacgtagtgtggggactggacatagcc-ggttaggcgaaccaggataa 100152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 143169 - 143237
Alignment:
Q  47 gcaaagaattgtataagcctgctgaggttgataatacaggtgttacggactgatctggtgtgatcaaga 115  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  143169 gcaaagaattgtagaagcctgctgaggttgataatacagtggttacggactgatctggtgtgatcaaga 143237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 220
Target Start/End: Complemental strand, 14999 - 14830
Alignment:
Q  50 aagaattgtataagcctgctgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagca 148  Q
    |||||| ||| ||||||||||||||||||||||||| |||| || |||||||||||||||||||| | ||| |||||||| ||||||||||||| |||||    
T  14999 aagaatcgtagaagcctgctgaggttgataatacagagtgtaacagactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagca 14900  T
Q  149 agaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataa 220  Q
     || | ||||||||||||||||||||||  |||||||||||||| |||||| |||| || ||||||||||||    
T  14899 ggata-ctatagtggataatctcacacgtagtgtggggactggacgtagcc-ggttaggcgaaccaggataa 14830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 24593 - 24762
Alignment:
Q  50 aagaattgtataagcctgctgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagca 148  Q
    |||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| | ||| |||||||| ||||||||||||| ||||     
T  24593 aagaatcgtagaagcctgctgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagc- 24691  T
Q  149 agaaaactatagtggataatctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataa 220  Q
    || | |||||||||||||||||||||||  |||||||||||||| |||| | |||| || ||||||||||||    
T  24692 aggatactatagtggataatctcacacgtagtgtggggactggacgtag-ctggttaggcgaaccaggataa 24762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 84 - 245
Target Start/End: Complemental strand, 2411 - 2251
Alignment:
Q  84 aggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaa--gaaaactatagtggataatctcacacgaggtg 181  Q
    |||||||  |||||||||||||||||||||||  || ||||| | || ||||||||||   | |||  | | ||||||||||||||||||||| || |||    
T  2411 aggtgttctggactgatctggtgtgatcaagaccttatagtgttggttagaagtttct---accaactgtatactatagtggataatctcacaagaagtg 2315  T
Q  182 tggggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    |||||||| ||||||||||| || |||||||||||||||||||||||||| |||||||||||||    
T  2314 tggggactagaagtagccggattgggtgaaccaggataactctcctgtgttattcttctctctc 2251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 84 - 245
Target Start/End: Complemental strand, 12698 - 12538
Alignment:
Q  84 aggtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatctcacacgaggtgtg 183  Q
    |||||||  ||||| |||||||||||||||||  || ||||| | || ||||||||||   | | | ||||||||||||||||||||||||||| ||||     
T  12698 aggtgttctggactaatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaacta-aaaactatagtggataatctcacacgaagtgta 12600  T
Q  184 gggactggaagtagccgggtttggtgaaccaggataactctcctgtgtgattcttctctctc 245  Q
    |||||||||||||||||| || |||||||||||||||||||||| ||| |||  ||||||||    
T  12599 gggactggaagtagccggattgggtgaaccaggataactctcctatgttatttctctctctc 12538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 210
Target Start/End: Complemental strand, 27246 - 27078
Alignment:
Q  47 gcaaagaattgta-taagcctgctgaggttgataatacag-gtgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgtt 144  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| ||| | |||||| |||||||||||||  | ||||| || | ||||||||||| |    
T  27246 gcaaagaattgtaataagcctgctgaggttgataatacagagtgtaacgaattgatctagtgtgatcaagaacatatagtgttattaagaagtttctgat 27147  T
Q  145 agcaagaaaactatag----tggataatctcacacgaggtgtggggactggaagtagccgggtttggtga 210  Q
    ||   | | |||||||    ||||||||||||||||| || |||||||||||||||||||  ||||||||    
T  27146 ag-ttggatactatagtggatggataatctcacacgaagtatggggactggaagtagccgactttggtga 27078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26355 - 26309
Alignment:
Q  1 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtg 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  26355 ttaatagttttgagatagaaaattccaacctttcttttgctagtgtg 26309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 49501 - 49565
Alignment:
Q  158 tagtggataatctcacacgaggtgtggggactggaagtagccgg-gtttggtgaaccaggataact 222  Q
    ||||||||||||||||||  | |||||||| ||||||||||||| |||||| |||||| |||||||    
T  49501 tagtggataatctcacacttg-tgtggggagtggaagtagccggcgtttggcgaaccacgataact 49565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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