View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7062_low_13 (Length: 327)
Name: NF7062_low_13
Description: NF7062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7062_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 37173414 - 37173094
Alignment:
| Q |
1 |
gaaagaattcatgccaacgttaaaaaagattattgatgatcatggagatatagcaaaagagtgcaccgaagaaagtgtggaataccgttcggcattgttg |
100 |
Q |
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| T |
37173414 |
gaaagaattcatgccaacgttaaaaaagattattgatgatcatggagatatagcaaaagagtgcaccaaagaaagtgtggaataccgttcggcattgttg |
37173315 |
T |
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| Q |
101 |
cagttgatatgtggaatcatattagagttgaaaatgaaaaatttgatcgaaactgaagaaggtatcttgaaaagaaatttttgtattgttgatgtaataa |
200 |
Q |
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| T |
37173314 |
cagttgatatgtggaatcatattagagttgaaaatgaaaaatttgatcgaaactgaagaaggtatcttgaaaagaaatttttgtattgttgatgtaataa |
37173215 |
T |
|
| Q |
201 |
gaaacaagaacgtggaagttgactggctttacaagaggataactgctgcgcttgaggcaaagaagacacttacacaatttggcacgctataagagaaaag |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37173214 |
gaaacaagaacgtggaagttgactggctttacaagaggataactgctgcgcttgaggcaaagaagacacttacacaatttggcacgctataagagaaaag |
37173115 |
T |
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| Q |
301 |
tgtcaataatatgatgtccat |
321 |
Q |
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|| ||||||||||| |||||| |
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| T |
37173114 |
tgacaataatatgaggtccat |
37173094 |
T |
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