View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7064_high_1 (Length: 234)
Name: NF7064_high_1
Description: NF7064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7064_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 20 - 223
Target Start/End: Complemental strand, 38896198 - 38895995
Alignment:
| Q |
20 |
aagactactctgatcaataattatcgatatcatgtttgaaggacatctttgctgctgccacttcctaataacatttttaattatttccctatcatttata |
119 |
Q |
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| T |
38896198 |
aagactactctgatcaataattatcgatatcatgtttgagggacatctttgctgctgccacttcctaataacatttttaattatttccctatcatttata |
38896099 |
T |
|
| Q |
120 |
tgaattttcaccttaatgtcttactccgagatgtctttcacctcttgttcttgtgaaggagaagtttaagttggacaattattttactttctctatgata |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38896098 |
tgaattttcaccttaatgtcttactccgagatgtctttcacctcttgttcttgtgaaggagaagtttaagttggacaattattttactttctctatgatt |
38895999 |
T |
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| Q |
220 |
ctac |
223 |
Q |
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|||| |
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| T |
38895998 |
ctac |
38895995 |
T |
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