View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7064_high_6 (Length: 326)
Name: NF7064_high_6
Description: NF7064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7064_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 45 - 290
Target Start/End: Original strand, 12504115 - 12504352
Alignment:
| Q |
45 |
agctattagtgaatttgttcgcttttaaatttaaagcactgaaaaattggttggacaatttgcttggtgtaaattgtctttagttcgaccccacagctaa |
144 |
Q |
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| T |
12504115 |
agctattagtgaatttgttcgctttcaaatttaaagcactgaaaaattggttggacaatttgcttggtgtaaatt---------tcgaccccacagctaa |
12504205 |
T |
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| Q |
145 |
tctataagtgaaattataaaaacgtgagacaattttaggctgaatctgtgcacgatcaaatttaatgcgctgaaatattattggttatacatctttttta |
244 |
Q |
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| T |
12504206 |
tctataagtgaaattataaaaacgtgagacaattttaggctgaatctgtacacgaccaaatttagtgcgctgaaa---tattggttatacatacttttta |
12504302 |
T |
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| Q |
245 |
cttttaatcctattaatttattc----taaatttaaaatgtgtttctatt |
290 |
Q |
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| T |
12504303 |
cttttaatcctattaatttattcgagtcaaatttaaaatgtgtttctatt |
12504352 |
T |
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