View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7064_low_4 (Length: 388)
Name: NF7064_low_4
Description: NF7064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7064_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 9 - 370
Target Start/End: Complemental strand, 12559326 - 12558966
Alignment:
| Q |
9 |
gaagaaaatagtggaagtatatgatttcccatcaacaattgcaatcatgaaacagctatagtggtccataatataatatata--gttcttattattcttc |
106 |
Q |
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| T |
12559326 |
gaagaaaatagtggaagtatatgatttcccatcaacaattgcaatcatgaaacagctatagtggtccataatataatatatatagttcttattattcttc |
12559227 |
T |
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| Q |
107 |
cataaaaagtagaagnnnnnnnngagttgtgaattaccagctgaacgagcaagagtattccatcgaccttcaccatgatttgcaatgtaattgatgagag |
206 |
Q |
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| T |
12559226 |
cataaaaagcagaagaaaaaa---agttgtgaattaccagcggaacgagcaagagtattccatcgaccttcaccatgatttgcaatgtaattgatgagag |
12559130 |
T |
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| Q |
207 |
caagatcttcatcgacggtccatggccctcgtcgaagatccaactcatcatcactttggagcatggtggtgtttgagttgcttattacacttccttccac |
306 |
Q |
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| T |
12559129 |
caagatcttcatcgacggtccatggccctcgtcgaagatccaactcatcatcactttggagcatggtgctgtttgagttgcttattacacttccttccac |
12559030 |
T |
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| Q |
307 |
ttccatgaaatattgaaaatttgatcaccctactttggatatgtatatgtttgaacacaaagtg |
370 |
Q |
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| T |
12559029 |
ttccatgaaatattgaaaatttgatcaccctactttggatatgtatatgtttgaacacaaagtg |
12558966 |
T |
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