View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7065_low_7 (Length: 328)
Name: NF7065_low_7
Description: NF7065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7065_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 11479785 - 11480112
Alignment:
| Q |
1 |
ataccaggtaactgcttaagaatcgccatcgattttgcgagttggttcgtatcgtgaatatgagcaagaagccagaattcaccatagtttaaagcaaatg |
100 |
Q |
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| T |
11479785 |
ataccaggtaactgcttaagaatcgccatcgattttgcgagttggttcgtatcgtgaatatgagcaagaagccagaattcgccatagtttaaagcaaatg |
11479884 |
T |
|
| Q |
101 |
ctgctaaggctaagaccaacttaacatcccacttgtagattgtaagcatctcaaatattgctactgtcgtggagtgtgcatctacaccagaaagaatctt |
200 |
Q |
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| T |
11479885 |
ctgctaaggctaacaccaacttaacatcccacttgtagattgtaagcatctcaaatattgctactgtcgtggagtgtgcatctacaccagaaagaatctt |
11479984 |
T |
|
| Q |
201 |
gtaggaaatctgaaatttacagtttatttgttatattgatgggaaaacatgcatgcagatggtatatagaaatagctta--atannnnnnnnaatagtta |
298 |
Q |
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| T |
11479985 |
gtaggaaatctgaaatttacagtttatttgttatattgacgggaaaacatgcatgcagatggtatatagaaatagcttaatatattttttttaatagtta |
11480084 |
T |
|
| Q |
299 |
tagcaagctatgttatcgttcatcatgt |
326 |
Q |
| |
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||||||||||||||||||||||| |||| |
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| T |
11480085 |
tagcaagctatgttatcgttcatgatgt |
11480112 |
T |
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