View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7066_high_4 (Length: 585)
Name: NF7066_high_4
Description: NF7066
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7066_high_4 |
 | |
|
| [»] chr8 (2 HSPs) |
| |
|
| [»] chr3 (44 HSPs) |
| |
|
| [»] chr4 (1 HSPs) |
| |
|
| [»] scaffold0002 (3 HSPs) |
| | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 543; Significance: 0; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 543; E-Value: 0
Query Start/End: Original strand, 19 - 585
Target Start/End: Complemental strand, 11485592 - 11485026
Alignment:
| Q |
19 |
aattgtagtccactccttttcaactacctttgaatgcattagtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctg |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11485592 |
aattgtagtccactccttttcaactacctttgaatgcattagtcctccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctg |
11485493 |
T |
|
| Q |
119 |
ccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggtt |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11485492 |
ccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggtt |
11485393 |
T |
|
| Q |
219 |
ctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagt |
318 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11485392 |
ctaatttatgaataggaaatgcgcatgcgacctctgcaactttctcttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagt |
11485293 |
T |
|
| Q |
319 |
tattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaaattcttctatccttcaaatgcttcattaattcaacttgaagg |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11485292 |
tattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaaattcttctatccttcaaatgcttcattaattcaacttgaagg |
11485193 |
T |
|
| Q |
419 |
atatcaagattattgctttcccagacatttgaattgacagacgttgtgtttctaacaacagattcaaggagggacttggttatcctcacgacatcgaaat |
518 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11485192 |
atatcaagattattgctttcccagacttttgaattgacagacgttgtgtttctaacaacagattcaaggagggacttggttatcctcacgacatcgaaat |
11485093 |
T |
|
| Q |
519 |
cttccgatacacaaacccatgctttgagatcaaattgctgttcaactttttcatcattgtaaacaag |
585 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
11485092 |
cctccgatacacaaacccatgctttgagatcaaaatgctgttcaactttttcatcgttgtaaacaag |
11485026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 19 - 585
Target Start/End: Original strand, 44957204 - 44957769
Alignment:
| Q |
19 |
aattgtagtccactccttttcaactacctttgaatgcattagtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctg |
118 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||| |||| |||| ||| |||| ||| ||||| ||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
44957204 |
aattgaagtccactccttttcaactatctttgaacgcataagtcctcccagtgttttggcagctattggcaatccaccacattttttagcaatcttcctg |
44957303 |
T |
|
| Q |
119 |
ccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggtt |
218 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||| | ||||| | | ||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44957304 |
ccaatctcttctaggtttgggtatt-accttgaacacggtcttcgctgtcaaatgcatgctttgagagtaaagaccaacaatcttcatcagatagaggtt |
44957402 |
T |
|
| Q |
219 |
ctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagt |
318 |
Q |
| |
|
||||||||||||| ||||||| | ||||||||||||||| || | ||| |||||||||||||| ||||||||| ||||| ||| || ||||||| || |
|
|
| T |
44957403 |
ctaatttatgaatcggaaatgtgtgtgcaacctctgcaacgttttgttcacgtgttgttatgatgaccttgctttcagttcctcggttggtcaagggtgt |
44957502 |
T |
|
| Q |
319 |
tattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaaattcttctatccttcaaatgcttcattaattcaacttgaagg |
418 |
Q |
| |
|
||||||| | |||||| | ||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
44957503 |
tattaactcagaccaatcgatataattgtcattccatatgtcgtccaacacaaacaaaaatcttctatccatcaaatgtttcattaattcaacttgaagg |
44957602 |
T |
|
| Q |
419 |
atatcaagattattgctttcccagacatttgaattgacagacgttgtgtttctaacaacagattcaaggagggacttggttatcctcacgacatcgaaat |
518 |
Q |
| |
|
||||||||||||| ||||||||| |||||||||| |||| | ||||| |||||||||||| ||||||| || ||||| ||||| || || |||| ||||| |
|
|
| T |
44957603 |
atatcaagattatcgctttcccacacatttgaatcgacatatgttgtttttctaacaacacattcaagaagagactttgttattctaacaacattgaaat |
44957702 |
T |
|
| Q |
519 |
cttccgatacacaaacccatgctttgagatcaaattgctgttcaactttttcatcattgtaaacaag |
585 |
Q |
| |
|
| || |||||||| | ||||||||||||||| || || |||||||||||| ||||||||||||||| |
|
|
| T |
44957703 |
cctctgatacacatatccatgctttgagatcgaaatgttgttcaacttttatatcattgtaaacaag |
44957769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 309; Significance: 1e-174; HSPs: 44)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 19 - 585
Target Start/End: Complemental strand, 10501128 - 10500565
Alignment:
| Q |
19 |
aattgtagtccactccttttcaactacctttgaatgcattagtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctg |
118 |
Q |
| |
|
||||| ||||||||| |||||||| |||||||| ||| ||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
10501128 |
aattgcagtccactctttttcaaccgcctttgaacgcaatagtcctccaagtgcttttgcagctatcggcaatccaccacactttctagcaatcttcctg |
10501029 |
T |
|
| Q |
119 |
ccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggtt |
218 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||| | | |||||| | ||||||||||||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
10501028 |
ccaatctcttctagctttgggtatttaccacgaacatagtcttcatcaccaaatgcatgcttcgagagtaaagtccaacaatcatcatcagatagaggtt |
10500929 |
T |
|
| Q |
219 |
ctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagt |
318 |
Q |
| |
|
||||||||||||||||||||| |||||| |||||||||||||| | ||||||||||||||| ||||| |||| | | ||||||| ||| |||||||||| |
|
|
| T |
10500928 |
ctaatttatgaataggaaatgtgcatgcgacctctgcaactttttgttcgcgtgttgttattatcactttgcctcctgtttctctgttagtcaagggagt |
10500829 |
T |
|
| Q |
319 |
tattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaaattcttctatccttcaaatgcttcattaattcaacttgaagg |
418 |
Q |
| |
|
||||||| |||||| |||| |||| |||| ||||| |||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||||||||| |
|
|
| T |
10500828 |
tattaactcatcccagtcaacataactgtcattccacatgtcgtccaacacaaacaaaaatcttctatccatcaaatgtttcattaactcaacttgaagg |
10500729 |
T |
|
| Q |
419 |
atatcaagattattgctttcccagacatttgaattgacagacgttgtgtttctaacaacagattcaaggagggacttggttatcctcacgacatcgaaat |
518 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||||| |||||||||| |
|
|
| T |
10500728 |
atatcaagattattgctttc---gaccattgaattgacagatgttgtatttctaacaacagattcaaggagagatttggttattctcacaacatcgaaat |
10500632 |
T |
|
| Q |
519 |
cttccgatacacaaacccatgctttgagatcaaattgctgttcaactttttcatcattgtaaacaag |
585 |
Q |
| |
|
| |||| |||||||| |||||| || |||||||| || | ||||| ||| || || ||||||||||| |
|
|
| T |
10500631 |
cctccggtacacaaatccatgccttcagatcaaaatgttcttcaattttatcgtcgttgtaaacaag |
10500565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 19 - 585
Target Start/End: Original strand, 11781497 - 11782063
Alignment:
| Q |
19 |
aattgtagtccactccttttcaactacctttgaatgcattagtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctg |
118 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |||| |||| |||||||| || ||||| ||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
11781497 |
aattgaagtccactccttttcaactacctttgaacgcataagtcctccaagtgtcttggcagctattggcaatccaccacattttttagcaatcttcctg |
11781596 |
T |
|
| Q |
119 |
ccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggtt |
218 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| | | || | || ||||||||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
11781597 |
ccaatctcttctaggtttgggtatttacggcgatcacagtccttactaccaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggtt |
11781696 |
T |
|
| Q |
219 |
ctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagt |
318 |
Q |
| |
|
||||| |||||||||||||| | ||| |||||||||||||| | || ||| |||||||| |||||| ||| ||| || ||||| | | | ||| | |
|
|
| T |
11781697 |
ctaatgcatgaataggaaatgtgtgtgccacctctgcaactttttgttggcgagttgttataatcaccgaacttccaggttttccatcattgagtggact |
11781796 |
T |
|
| Q |
319 |
tattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaaattcttctatccttcaaatgcttcattaattcaacttgaagg |
418 |
Q |
| |
|
|| || | | ||||||| |||| || ||||| | || || ||||||||||||| |||| | ||| || | | ||| | ||||||||| ||||| |
|
|
| T |
11781797 |
tactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatcttttctccctcgagttctttttcaattcaactcgaagg |
11781896 |
T |
|
| Q |
419 |
atatcaagattattgctttcccagacatttgaattgacagacgttgtgtttctaacaacagattcaaggagggacttggttatcctcacgacatcgaaat |
518 |
Q |
| |
|
||||||||||||| ||||||||| || |||||| || ||||| || ||||||||||||||||||| ||||||||||| || || |||||||||| |
|
|
| T |
11781897 |
atatcaagattatcgctttcccaaacctttgaagcagatgatgttgtacttttaacaacagattcaaggagagacttggttattctaacaacatcgaaat |
11781996 |
T |
|
| Q |
519 |
cttccgatacacaaacccatgctttgagatcaaattgctgttcaactttttcatcattgtaaacaag |
585 |
Q |
| |
|
| ||||||||||||||||| |||||| |||||| || ||||||||||| |||||||||||||||| |
|
|
| T |
11781997 |
cctccgatacacaaacccagactttgaaatcaaaatgttgttcaactttcacatcattgtaaacaag |
11782063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 77 - 585
Target Start/End: Complemental strand, 10527854 - 10527346
Alignment:
| Q |
77 |
gcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcat |
176 |
Q |
| |
|
||||| ||||||||||| ||| ||||||| |||||||| ||||| || ||||| ||| ||| || | ||| |||| || |||| || ||||||| |
|
|
| T |
10527854 |
gcagctattggcaatcctccatactttcttgcaatctttctgcctatttcttcaagggttgtgtttgtactattgtgaaactcatcacttcccaatgcat |
10527755 |
T |
|
| Q |
177 |
gcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgt |
276 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||| | ||| || |||||| |||||||||| || ||| ||||| |||||||| || | | ||||| |
|
|
| T |
10527754 |
gctttgagagtaaagaccaacaatcttcatttgataaaagttttagtttatgtataggaaatgtgcgtgccacctcagcaacttttcgttggtgggttgt |
10527655 |
T |
|
| Q |
277 |
tatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaa |
376 |
Q |
| |
|
||| |||||| | ||| ||| || ||||| ||| | ||| ||| || | |||||||||| |||||||| ||||||| || ||||||||||||||| |
|
|
| T |
10527654 |
tataatcaccatacttccaggttttccatcaatgagtggacttactagctcatcccaatcattgtaattgtcattccatagatcatccaacacaaacaaa |
10527555 |
T |
|
| Q |
377 |
attcttctatcc-ttcaaatgcttcattaattcaacttgaaggatatcaagattattgctttcccagacatttgaattgacagacgttgtgtttctaaca |
475 |
Q |
| |
|
| ||| | ||| || | || ||| |||| | |||| ||||||||||||||||||||||||||||||| |||||| ||| | ||| ||||||||| |
|
|
| T |
10527554 |
aatctcttctcccttgagatt-ttctttaactgaactcgaaggatatcaagattattgctttcccagacctttgaagcagaagatgatgtatttctaaca |
10527456 |
T |
|
| Q |
476 |
acagattcaaggagggacttggttatcctcacgacatcgaaatcttccgatacacaaacccatgctttgagatcaaattgctgttcaactttttcatcat |
575 |
Q |
| |
|
|||||||||| ||| |||||||||| ||||| ||||||||||| || |||||| ||||||| || ||||||||||| || |||||||| |||||||||| |
|
|
| T |
10527455 |
acagattcaatgagagacttggttactctcacaacatcgaaatcctctgatacataaacccaggccttgagatcaaaatggtgttcaaccttttcatcat |
10527356 |
T |
|
| Q |
576 |
tgtaaacaag |
585 |
Q |
| |
|
|||||||||| |
|
|
| T |
10527355 |
tgtaaacaag |
10527346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 19 - 286
Target Start/End: Complemental strand, 10518039 - 10517772
Alignment:
| Q |
19 |
aattgtagtccactccttttcaactacctttgaatgcattagtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctg |
118 |
Q |
| |
|
||||| || ||||||||||||||||||||||||| |||| |||| |||||||| ||| ||||| ||||| || |||||||| ||| |||||||||||||| |
|
|
| T |
10518039 |
aattgaagaccactccttttcaactacctttgaacgcataagtcctccaagtgttttggcagctattggtaacccaccacattttttagcaatcttcctg |
10517940 |
T |
|
| Q |
119 |
ccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggtt |
218 |
Q |
| |
|
||||||||||| || ||||||||||||| || | || | || ||||||||||| || ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
10517939 |
ccaatctcttcaagatttgggtatttactgtgatcactgtccttactaccaaatgcatgttttgagagtaaagaccaacaatcttcatgagatagaggtt |
10517840 |
T |
|
| Q |
219 |
ctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgttatgatcacc |
286 |
Q |
| |
|
|||||| ||||||||||||| | ||| |||||||||||||| | || ||| |||||||| |||||| |
|
|
| T |
10517839 |
ctaattcctgaataggaaatgtgtgtgccacctctgcaactttttgttggcgcgttgttataatcacc |
10517772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 77 - 441
Target Start/End: Original strand, 10433617 - 10433981
Alignment:
| Q |
77 |
gcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcat |
176 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||| |||||| || ||||| ||| ||| || | || | |||| || |||| ||| ||||||| |
|
|
| T |
10433617 |
gcagcaattggcaatcctccacactttcttgcaatctccctgcctatttcttcaagggttgtgtttgtattgaggtgaaactcatcactgcccaatgcat |
10433716 |
T |
|
| Q |
177 |
gcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgt |
276 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||| | ||| ||||| |||||||| | || ||| ||||| |
|
|
| T |
10433717 |
gcttcgagagtaaagaccaacaatcttcatttgatagaagttctaatttatgtataggaaatgtgtgtgccacctcagcaactttttgttggcgcgttgt |
10433816 |
T |
|
| Q |
277 |
tatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaa |
376 |
Q |
| |
|
||| |||||| ||||| | | || ||||| ||| |||||| ||| || | |||||||| ||||||||| ||||| | |||||||||||||||||| |
|
|
| T |
10433817 |
tataatcaccatgcttccgggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacagatcgtccaacacaaacaaa |
10433916 |
T |
|
| Q |
377 |
attcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattgctttccca |
441 |
Q |
| |
|
| |||| | ||| || | | ||| |||| ||||| |||||| ||||||||||||||| ||||| |
|
|
| T |
10433917 |
aatcttttctccctcgagtttttctttaactcaacacgaaggacatcaagattattgctatccca |
10433981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 80 - 441
Target Start/End: Complemental strand, 11769727 - 11769366
Alignment:
| Q |
80 |
gcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcatgct |
179 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||| || || ||||| ||| ||| || | ||| | |||| || |||| || |||||||||| |
|
|
| T |
11769727 |
gcaattggcaatcctccacactttcttgcaatcttccttcctatttcttcaagggttgtgtttgtactatggtgaaactcatcacttcccaatgcatgct |
11769628 |
T |
|
| Q |
180 |
tcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgttat |
279 |
Q |
| |
|
| ||||||||||||||||||||||||| |||||| ||| ||||| ||| |||||||||| | ||| ||||| |||||||| || |||||||||||| |
|
|
| T |
11769627 |
ttgagagtaaagaccaacaatcttcatttgatagaagttttaattcatgtataggaaatgtgtgtgccacctcagcaacttttcgttggcgtgttgttat |
11769528 |
T |
|
| Q |
280 |
gatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaaatt |
379 |
Q |
| |
|
|||||| ||||| ||| || ||||||| | |||||| ||| || | |||||||| ||||||||| ||||| || || || ||||||||||||| | |
|
|
| T |
11769527 |
aatcaccatgcttccaggttttccattactgaagggacttactagttcaccccaatcattataattgtcattccacatatcatctaacacaaacaaaaat |
11769428 |
T |
|
| Q |
380 |
cttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattgctttccca |
441 |
Q |
| |
|
||| | ||| |||| | ||| |||| |||||| |||||||||||||||||||||| ||||| |
|
|
| T |
11769427 |
cttttctccctcaagtttttctttaactcaactcgaaggatatcaagattattgctatccca |
11769366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 64 - 441
Target Start/End: Original strand, 11130586 - 11130963
Alignment:
| Q |
64 |
tccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggtatttaccccgaagaaattcttca |
163 |
Q |
| |
|
|||||||| ||||||||| || ||||| ||| |||||||||| |||||||| || ||||| |||||||||||| | ||||| | ||| | |||| |
|
|
| T |
11130586 |
tccaagtgtttttgcagctatgggcaacccagcacactttcttgcaatctttctaccaattgcttctaggtttgagcatttattgtcacaaaagttttca |
11130685 |
T |
|
| Q |
164 |
ccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttct |
263 |
Q |
| |
|
| |||||||||||||| |||||||||||||| |||||||| ||||| | ||||||||||||||||||||||| |||||||||||||||||| | |
|
|
| T |
11130686 |
cttccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttatgaataggaaatgtatgtgcaacctctgcaacttttt |
11130785 |
T |
|
| Q |
264 |
cttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtc |
363 |
Q |
| |
|
|| ||||||||| | ||| ||| ||||| || | | |||||||||||| ||||||| | |||||||||| ||||||||| ||||||| ||| || |
|
|
| T |
11130786 |
gttggcgtgttgtgacgatgaccctgcttccattgtttccattaatcaaaggagttacaagttcatcccaatcattataattgtcattccataggtcatc |
11130885 |
T |
|
| Q |
364 |
caacacaaacaaaattcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattgctttccca |
441 |
Q |
| |
|
|||||||||||||| |||| | || ||||| ||| | | ||||||| |||| | ||||||||||||| ||||||| |
|
|
| T |
11130886 |
caacacaaacaaaaatcttttgtctctcaaagttttcttcagttcaactcgaagaaaatcaagattattgttttccca |
11130963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 19 - 438
Target Start/End: Complemental strand, 13333458 - 13333039
Alignment:
| Q |
19 |
aattgtagtccactccttttcaactacctttgaatgcattagtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctg |
118 |
Q |
| |
|
||||| ||||||||| ||| || ||||||||||| ||| | || ||| |||| ||| ||||| || |||||||||||||||||| | |||||||| || |
|
|
| T |
13333458 |
aattgcagtccactcttttgcatctacctttgaacgcaaaattcctccgagtgttttagcagctatgggcaatccaccacactttttggcaatctttcta |
13333359 |
T |
|
| Q |
119 |
ccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggtt |
218 |
Q |
| |
|
||||| |||||||| |||||||| || | | || ||||||| || ||||||||||| || ||||| |||||||| || ||||| |||||||| | |
|
|
| T |
13333358 |
ccaatttcttctagatttgggtactttctacctcgacggtcttcacttccgaatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggat |
13333259 |
T |
|
| Q |
219 |
ctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagt |
318 |
Q |
| |
|
||| ||| ||||||||||| | | ||||||||| |||||||| | || ||||||||| ||||||||| | ||| | ||| || ||||||| ||||| |
|
|
| T |
13333258 |
ctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggcgtgttgtgatgatcaccctacttccttttttgccgttaatcagtggagt |
13333159 |
T |
|
| Q |
319 |
tattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaaattcttctatccttcaaatgcttcattaattcaacttgaagg |
418 |
Q |
| |
|
|| |||| |||||||||| ||||||||| ||||| | ||| |||||||| ||||||| |||| ||||| |||| | || | ||||||||| |||| |
|
|
| T |
13333158 |
tactaactcatcccaatcattataattgtcattccacaggtcatccaacactaacaaaaatcttttatccctcaagtttttattcaattcaactcgaaga |
13333059 |
T |
|
| Q |
419 |
atatcaagattattgctttc |
438 |
Q |
| |
|
| ||||||||||||| |||| |
|
|
| T |
13333058 |
aaatcaagattattgttttc |
13333039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 64 - 441
Target Start/End: Complemental strand, 8861795 - 8861418
Alignment:
| Q |
64 |
tccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggtatttaccccgaagaaattcttca |
163 |
Q |
| |
|
|||||||| ||||||||| || ||||| ||| |||||||||| |||||||| || ||||| |||||||||||| | ||||| | ||| | |||| |
|
|
| T |
8861795 |
tccaagtgtttttgcagctatgggcaacccagcacactttcttgcaatctttctaccaattgcttctaggtttgagcatttattgtcacaaaagttttca |
8861696 |
T |
|
| Q |
164 |
ccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttct |
263 |
Q |
| |
|
| |||||||||||||| |||||||||||||| |||||||| ||||| | ||||||||||||||||||||||| |||||||||||||||||| | |
|
|
| T |
8861695 |
cttccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttatgaataggaaatgtatgtgcaacctctgcaacttttt |
8861596 |
T |
|
| Q |
264 |
cttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtc |
363 |
Q |
| |
|
|| ||||||||| | ||| ||| ||||| || | | |||||||||||| ||||||| | |||||| ||| ||||||||| ||||||| ||| || |
|
|
| T |
8861595 |
gttggcgtgttgtgacgatgaccctgcttccactgtttccattaatcaaaggagttacaagttcatcccactcattataattgtcattccataggtcatc |
8861496 |
T |
|
| Q |
364 |
caacacaaacaaaattcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattgctttccca |
441 |
Q |
| |
|
|||||||||||||| |||| | || |||| ||| ||| ||||||| |||| | ||||||||||||| ||||||| |
|
|
| T |
8861495 |
caacacaaacaaaaatcttttgtctctcaatgttttctttagttcaactcgaagaaaatcaagattattgttttccca |
8861418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 47 - 382
Target Start/End: Original strand, 11148397 - 11148732
Alignment:
| Q |
47 |
tttgaatgcattagtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggtatttac |
146 |
Q |
| |
|
|||||| ||| || || |||||||| ||||||||| || ||||| ||| |||||||||| |||||||| || ||||| |||||||||||| | ||||| |
|
|
| T |
11148397 |
tttgaacgcaatactcctccaagtgtttttgcagctatgggcaacccaacacactttcttgcaatctttctaccaattgcttctaggtttgagcatttat |
11148496 |
T |
|
| Q |
147 |
cccgaagaaattcttcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgc |
246 |
Q |
| |
|
| ||| | ||||| |||||||||||||| |||||||||||||| |||||||| ||||| | ||||||||||||||||||||||| ||| |
|
|
| T |
11148497 |
tgtcacaaaagttttcacttccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttatgaataggaaatgtatgtgc |
11148596 |
T |
|
| Q |
247 |
aacctctgcaactttctcttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattg |
346 |
Q |
| |
|
||||||||||||||| | || ||||||||| | ||| ||| ||||| || | | |||||||||||| || |||| | |||||||||| ||||||| |
|
|
| T |
11148597 |
aacctctgcaactttttgttggcgtgttgtgacgatgaccctgcttccactgtttccattaatcaaaggtgttacaagttcatcccaatcattataattg |
11148696 |
T |
|
| Q |
347 |
tcgttccatatgtcgtccaacacaaacaaaattctt |
382 |
Q |
| |
|
|| ||||||| ||| |||||||||||||||| |||| |
|
|
| T |
11148697 |
tcattccataagtcatccaacacaaacaaaaatctt |
11148732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 64 - 441
Target Start/End: Original strand, 11159577 - 11159954
Alignment:
| Q |
64 |
tccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggtatttaccccgaagaaattcttca |
163 |
Q |
| |
|
|||||||| ||||||||| || ||||| ||| |||||||||| ||||||| || ||||| |||||||||||| | |||| | ||| | |||| |
|
|
| T |
11159577 |
tccaagtgtttttgcagctatgggcaacccagcacactttcttgcaatctgtctaccaattgcttctaggtttgagcctttattgtcacaaaagttttca |
11159676 |
T |
|
| Q |
164 |
ccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttct |
263 |
Q |
| |
|
| |||||||||||||| |||||||||||||| |||||||| ||||| | ||||||||||||||||||||||| |||||||||||||||||| | |
|
|
| T |
11159677 |
cttccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttatgaataggaaatgtatgtgcaacctctgcaacttttt |
11159776 |
T |
|
| Q |
264 |
cttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtc |
363 |
Q |
| |
|
|| ||||||||| | ||| ||| ||||| || | | |||||||||||| ||||||| | |||||||||| ||||||||| ||||| | ||| || |
|
|
| T |
11159777 |
gttggcgtgttgtgacgatgaccctgcttccactgtttccattaatcaaaggagttacaagttcatcccaatcattataattgtcattccaaaggtcatc |
11159876 |
T |
|
| Q |
364 |
caacacaaacaaaattcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattgctttccca |
441 |
Q |
| |
|
|||||||||||||| |||| | || ||||| ||| ||| ||||||| |||| | ||||||||||||| ||||||| |
|
|
| T |
11159877 |
caacacaaacaaaaatcttttgtcgctcaaagttttctttagttcaactcgaagaaaatcaagattattggtttccca |
11159954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 438
Target Start/End: Complemental strand, 13344643 - 13344224
Alignment:
| Q |
19 |
aattgtagtccactccttttcaactacctttgaatgcattagtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctg |
118 |
Q |
| |
|
||||| ||||||||| ||| || ||||||||||| ||| | || ||| |||| ||| ||||| || |||||||||||||||||| | |||||||| || |
|
|
| T |
13344643 |
aattgcagtccactcttttgcatctacctttgaacgcaaaattcctccgagtgttttagcagctatgggcaatccaccacactttttggcaatctttcta |
13344544 |
T |
|
| Q |
119 |
ccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggtt |
218 |
Q |
| |
|
||||| |||||||| |||||||| || | | || ||||||| || ||||||||||| || ||||| |||||||| || ||||| |||||||| | |
|
|
| T |
13344543 |
ccaatttcttctagatttgggtactttctacctcgacggtcttcacttccgaatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggat |
13344444 |
T |
|
| Q |
219 |
ctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagt |
318 |
Q |
| |
|
||| ||| ||||||||||| | | ||||||||| |||||||| | || ||||||||| ||||||||| | ||| | |||| || |||||||| ||||| |
|
|
| T |
13344443 |
ctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggcgtgttgtgatgatcaccatacttcccgttttgccgttaatcaatggagt |
13344344 |
T |
|
| Q |
319 |
tattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaaattcttctatccttcaaatgcttcatt-aattcaacttgaag |
417 |
Q |
| |
|
|| |||| |||||||||| |||| | || ||||| | ||||||| ||| ||||||| |||| ||||| |||| | || ||| ||||||||| |||| |
|
|
| T |
13344343 |
tactaactcatcccaatcattataactatcattccacagatcgtccagcactaacaaaaatcttttatccctcaagt-tttgattcaattcaactcgaag |
13344245 |
T |
|
| Q |
418 |
gatatcaagattattgctttc |
438 |
Q |
| |
|
| ||||||||||||| |||| |
|
|
| T |
13344244 |
aaaatcaagattattgttttc |
13344224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 42 - 439
Target Start/End: Original strand, 10363336 - 10363733
Alignment:
| Q |
42 |
ctacctttgaatgcattagtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggta |
141 |
Q |
| |
|
||||||||||| | | |||| ||| |||| ||| ||||||||||||||||| ||||||||||| |||||||||||||| || ||||| ||| ||| || |
|
|
| T |
10363336 |
ctacctttgaacggagaagtcctcctagtgttttagcagcaattggcaatcctccacactttcttgcaatcttcctgcctatttcttcaagggttgtgtt |
10363435 |
T |
|
| Q |
142 |
tttaccccgaagaaattcttcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcg |
241 |
Q |
| |
|
| ||| |||| || ||| || | ||||||||| |||||||||| |||||||||||||| |||||| | ||||||||||| |||||||||| | |
|
|
| T |
10363436 |
tgtactattgtgaaactcatcatttcccagtgcatgctttgagagtaaagtccaacaatcttcatttgatagaagatctaatttatgtataggaaatgtg |
10363535 |
T |
|
| Q |
242 |
catgcaacctctgcaactttctcttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagat |
341 |
Q |
| |
|
||| ||||| || ||||| |||| ||| |||||||| |||||| ||||| ||| || ||||| ||| ||||| ||| || | |||||||| || |
|
|
| T |
10363536 |
tgtgccacctcagctactttttcttggcgcgttgttataatcaccatgcttccaggttttccatcaatgaaggggcttactagttcaccccaatcattat |
10363635 |
T |
|
| Q |
342 |
aattgtcgttccatatgtcgtccaacacaaacaaaattcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattgctttcc |
439 |
Q |
| |
|
||||||| ||||| | |||||||||||||||||| |||| | ||| || | ||| |||| |||||| |||||| ||||||||||||||||||| |
|
|
| T |
10363636 |
aattgtcattccacagatcgtccaacacaaacaaatatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattgctttcc |
10363733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 19 - 438
Target Start/End: Complemental strand, 13171585 - 13171166
Alignment:
| Q |
19 |
aattgtagtccactccttttcaactacctttgaatgcattagtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctg |
118 |
Q |
| |
|
||||| ||||||||| ||| || ||||||||||| ||| | || ||| |||| ||| | ||| || |||||||||||||||||| | |||||||| || |
|
|
| T |
13171585 |
aattgcagtccactcttttgcatctacctttgaacgcaaaattcctccgagtgttttaggagctatgggcaatccaccacactttttggcaatctttcta |
13171486 |
T |
|
| Q |
119 |
ccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggtt |
218 |
Q |
| |
|
||||| |||||||| |||||||| || | | || ||||||| || ||||||||||| || ||||| |||||||| || ||||| |||||||| | |
|
|
| T |
13171485 |
ccaatttcttctagatttgggtactttctacctcgacggtcttcacttccgaatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggat |
13171386 |
T |
|
| Q |
219 |
ctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagt |
318 |
Q |
| |
|
||| ||| ||||||||||| | | ||||||||| |||||||| | || ||||||||| ||||||||| | ||| | |||| || |||||||| ||||| |
|
|
| T |
13171385 |
ctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggcgtgttgtgatgatcaccatacttcccgttttgccgttaatcaatggagt |
13171286 |
T |
|
| Q |
319 |
tattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaaattcttctatccttcaaatgcttcatt-aattcaacttgaag |
417 |
Q |
| |
|
|| |||| |||||||||| |||| | || ||||| | ||||||| ||| ||||||| |||| ||||| |||| | || ||| ||||||||| |||| |
|
|
| T |
13171285 |
tactaactcatcccaatcattataactatcattccacagatcgtccagcactaacaaaaatcttttatccctcaagt-tttgattcaattcaactcgaag |
13171187 |
T |
|
| Q |
418 |
gatatcaagattattgctttc |
438 |
Q |
| |
|
| ||||||||||||| |||| |
|
|
| T |
13171186 |
aaaatcaagattattgttttc |
13171166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 170 - 441
Target Start/End: Complemental strand, 10127331 - 10127060
Alignment:
| Q |
170 |
aatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgc |
269 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||| ||||| || || || ||| |||||||||| || ||| ||||| |||||||| | || || |
|
|
| T |
10127331 |
aatgcatgctttgatagtaaagaccaacaatcttcatctgatagtacttttagttcatgtataggaaatgtgcgtgccacctcagcaactttttgttggc |
10127232 |
T |
|
| Q |
270 |
gtgttgttatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacac |
369 |
Q |
| |
|
| |||||||| |||||| ||||| ||| || ||||||||| |||||| ||| || | |||||||||| | ||||||| ||||||| ||||||||||| |
|
|
| T |
10127231 |
gcgttgttataatcaccatgcttccaggttttccattaatgaagggacttactagctcatcccaatcattacaattgtcattccatagatcgtccaacac |
10127132 |
T |
|
| Q |
370 |
aaacaaaattcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattgctttccca |
441 |
Q |
| |
|
|||||||| |||| | ||| || | ||| |||| ||||| |||||| ||||||||||||||| ||||| |
|
|
| T |
10127131 |
aaacaaaaatcttttttccctcgagattttctttaacgcaactcgaaggacatcaagattattgctatccca |
10127060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 64 - 441
Target Start/End: Complemental strand, 10889815 - 10889438
Alignment:
| Q |
64 |
tccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggtatttaccccgaagaaattcttca |
163 |
Q |
| |
|
|||||||| ||||||||| || ||||| ||| |||||||||| ||||||| || ||||| |||||||||||| | ||||| | ||| | |||| |
|
|
| T |
10889815 |
tccaagtgtttttgcagctatgggcaacccagcacactttcttgcaatctgtctaccaattgcttctaggtttgagcatttattgtcacaaaagttttca |
10889716 |
T |
|
| Q |
164 |
ccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttct |
263 |
Q |
| |
|
| |||||||||||||| |||||||||||||| |||||||| ||||| | ||||||||| ||||||||| | | | |||||||||||||||||| | |
|
|
| T |
10889715 |
cttccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttgtgaataggatacgtgtgtgcaacctctgcaacttttt |
10889616 |
T |
|
| Q |
264 |
cttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtc |
363 |
Q |
| |
|
| ||||||||| |||| ||| ||||| || | | |||||||||||| ||||||| | |||||||||| ||||||||| ||||||| ||| || |
|
|
| T |
10889615 |
gctggcgtgttgtgatgacgaccctgcttccactgtttccattaatcaaaggagttacaagttcatcccaatcattataattgtcattccataggtcatc |
10889516 |
T |
|
| Q |
364 |
caacacaaacaaaattcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattgctttccca |
441 |
Q |
| |
|
|||||||||||||| |||| | || ||||| ||| ||| ||||||| |||| | ||| ||||||||| ||||||| |
|
|
| T |
10889515 |
caacacaaacaaaaatcttttgtctctcaaagttttctttagttcaactcgaagaaaatctagattattgttttccca |
10889438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 77 - 441
Target Start/End: Complemental strand, 9850235 - 9849871
Alignment:
| Q |
77 |
gcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcat |
176 |
Q |
| |
|
||||| ||||||||||| ||||||||||| |||||||||||||| || ||||| ||| || || | || | |||| || |||| || ||||||| |
|
|
| T |
9850235 |
gcagctattggcaatcctccacactttcttgcaatcttcctgcctatttcttcaagggctgtgtttgaactatggtgaaactcatcacttcccaatgcat |
9850136 |
T |
|
| Q |
177 |
gcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgt |
276 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||| | ||||||||||| || ||||||| | ||| ||||| |||||||| | || ||||||||| |
|
|
| T |
9850135 |
gctttgagagtaaagaccaacaatcttcatttgatagaagatctaatttatgtattggaaatgtgtgtgccacctcagcaactttttgttggcgtgttgt |
9850036 |
T |
|
| Q |
277 |
tatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaa |
376 |
Q |
| |
|
||| |||||| ||||| | | || ||||| ||| |||||| ||| || | |||||||| ||||||||| ||||| | || ||||||||||||||| |
|
|
| T |
9850035 |
tataatcaccatgcttccgggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacaaatcatccaacacaaacaaa |
9849936 |
T |
|
| Q |
377 |
attcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattgctttccca |
441 |
Q |
| |
|
| |||| | ||| | | | ||| |||| ||||| |||||| ||||||||||||||| ||||| |
|
|
| T |
9849935 |
aatcttttctcccttgagtttttctttaacgcaactcgaaggacatcaagattattgctatccca |
9849871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 77 - 433
Target Start/End: Complemental strand, 10077765 - 10077409
Alignment:
| Q |
77 |
gcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcat |
176 |
Q |
| |
|
||||| ||||||||||| ||||||||||| |||||||||||||| || ||||| ||| ||| || | ||| | |||| || || | | ||||||| |
|
|
| T |
10077765 |
gcagctattggcaatcctccacactttcttgcaatcttcctgcctatttcttcaagggttgagtttgtactatggtgaaactcaccaactctcaatgcat |
10077666 |
T |
|
| Q |
177 |
gcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgt |
276 |
Q |
| |
|
|||| || |||||| ||||||||||||||| |||| |||||||||| |||| |||||||||| || ||| |||||||||||||| | || ||||||||| |
|
|
| T |
10077665 |
gctttgaaagtaaataccaacaatcttcatttgataaaggttctaatatatgtataggaaatgtgcgtgccacctctgcaactttttgttggcgtgttgt |
10077566 |
T |
|
| Q |
277 |
tatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaa |
376 |
Q |
| |
|
||| |||||| ||||| || | ||||| ||| |||||| ||| | |||||||||| ||||||||| ||||| || || || |||||||||||| |
|
|
| T |
10077565 |
tataatcaccatgcttccatgctttccatcaatgaagggacttacaagttcatcccaatcactataattgtcattccacatatcatctaacacaaacaaa |
10077466 |
T |
|
| Q |
377 |
attcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattg |
433 |
Q |
| |
|
| |||| ||||| || | | || |||| |||||| |||||| |||||||| |||| |
|
|
| T |
10077465 |
aatcttttatccctcgagtttttttttaactcaactcgaaggacatcaagatcattg |
10077409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 77 - 441
Target Start/End: Complemental strand, 10184738 - 10184374
Alignment:
| Q |
77 |
gcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcat |
176 |
Q |
| |
|
||||| ||||||||||| ||||||||||| |||||||||||||| || ||||| | | ||| || | || || |||| || || | | ||||||| |
|
|
| T |
10184738 |
gcagctattggcaatcctccacactttcttgcaatcttcctgcctatttcttcaaaggttgagtttctagtacggtgaaactcaccaactctcaatgcat |
10184639 |
T |
|
| Q |
177 |
gcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgt |
276 |
Q |
| |
|
|||| |||||||| |||||||||||||||| |||||| ||| || || ||| |||||||||| | ||| ||||| || ||||| |||| ||| ||||| |
|
|
| T |
10184638 |
gctttgagagtaacgaccaacaatcttcatttgatagaagttttagttcatgtataggaaatgtgtgtgccacctcagctactttttcttggcgcgttgt |
10184539 |
T |
|
| Q |
277 |
tatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaa |
376 |
Q |
| |
|
||| |||||| ||||| ||| || ||||| ||| |||||| ||| || | |||||||||| |||| |||| ||||| | || ||||| ||||||||| |
|
|
| T |
10184538 |
tataatcaccatgcttccaggttttccatcaatgaagggacttactagctcatcccaatcatcataactgtcattccacagatcatccaatacaaacaaa |
10184439 |
T |
|
| Q |
377 |
attcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattgctttccca |
441 |
Q |
| |
|
| |||| | ||| | |||| ||| |||| |||||| |||||| ||||||||||||||| ||||| |
|
|
| T |
10184438 |
aatcttttctcccttgaatgtttctttaactcaactcgaaggacatcaagattattgctatccca |
10184374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 42 - 435
Target Start/End: Complemental strand, 10089321 - 10088928
Alignment:
| Q |
42 |
ctacctttgaatgcattagtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggta |
141 |
Q |
| |
|
||||||||||| | | |||| ||| |||| ||| ||||| ||||||||||| |||||||| || |||||||||| |||||| |||| ||| ||| || |
|
|
| T |
10089321 |
ctacctttgaacgtagaagtcctcctagtgttttggcagctattggcaatcctccacacttccttgcaatcttccggccaattgcttcaagggttgtgtt |
10089222 |
T |
|
| Q |
142 |
tttaccccgaagaaattcttcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcg |
241 |
Q |
| |
|
| ||| | |||| | ||| ||| ||||||||||| |||||||||| |||||||||||||| || ||| ||||||||||||| |||||||||| | |
|
|
| T |
10089221 |
tgtactatggggaaacttatcattgcccaatgcatgctttgagagtaaagtccaacaatcttcatttgacagaagttctaatttatgtataggaaatgtg |
10089122 |
T |
|
| Q |
242 |
catgcaacctctgcaactttctcttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagat |
341 |
Q |
| |
|
||| ||||| || ||||| |||| ||| |||||||| |||||| ||||| ||| || ||||| ||| |||||| ||| || | ||||||| || |
|
|
| T |
10089121 |
tgtgccacctcagctactttttcttggcgcgttgttataatcaccatgcttccaggttttccatcaatgaagggacttactagtgcaatccaatcattat |
10089022 |
T |
|
| Q |
342 |
aattgtcgttccatatgtcgtccaacacaaacaaaattcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattgct |
435 |
Q |
| |
|
||||||| ||||| | || |||||||||||||||| |||| | ||| || | | ||| |||| ||||||||||||| | |||||| |||||| |
|
|
| T |
10089021 |
aattgtcattccacagatcatccaacacaaacaaaaatcttttctccctcgagtttttctttaactcaacttgaaggacaccaagatcattgct |
10088928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 77 - 441
Target Start/End: Complemental strand, 9839357 - 9838993
Alignment:
| Q |
77 |
gcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcat |
176 |
Q |
| |
|
||||| ||||||||||| ||||||||||| |||||||||||||| || ||||| ||| || || | || | |||| || |||| || ||||||| |
|
|
| T |
9839357 |
gcagctattggcaatcctccacactttcttgcaatcttcctgcctatttcttcaagggctgtgtttgaactatggtgaaactcatcacttcccaatgcat |
9839258 |
T |
|
| Q |
177 |
gcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgt |
276 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||| | ||||||||||| || ||||||| | ||| ||||| |||||||| | || ||| ||||| |
|
|
| T |
9839257 |
gctttgagagtaaagaccaacaatcttcatttgatagaagatctaatttatgtattggaaatgtgtgtgccacctcagcaactttttgttggcgcgttgt |
9839158 |
T |
|
| Q |
277 |
tatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaa |
376 |
Q |
| |
|
||| |||||| ||||| | | || ||||| ||| |||||| ||| || | |||||||| ||||||||| ||||| | || ||||||||||||||| |
|
|
| T |
9839157 |
tataatcaccatgcttccgggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacaaatcatccaacacaaacaaa |
9839058 |
T |
|
| Q |
377 |
attcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattgctttccca |
441 |
Q |
| |
|
| |||| | ||| | | | ||| |||| ||||| |||||| ||||||||||||||| ||||| |
|
|
| T |
9839057 |
aatcttttctcccttgagtttttctttaacgcaactcgaaggacatcaagattattgctatccca |
9838993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 404 - 584
Target Start/End: Complemental strand, 10517654 - 10517474
Alignment:
| Q |
404 |
aattcaacttgaaggatatcaagattattgctttcccagacatttgaattgacagacgttgtgtttctaacaacagattcaaggagggacttggttatcc |
503 |
Q |
| |
|
||||||||| |||||||||||||||||| ||||||||| || ||||| | || ||||| |||||||||| ||||||||||| ||||||||| | |
|
|
| T |
10517654 |
aattcaactcgaaggatatcaagattatcgctttcccaaacctttgagccagctgatgttgtatttctaacaatagattcaaggatagacttggttgctc |
10517555 |
T |
|
| Q |
504 |
tcacgacatcgaaatcttccgatacacaaacccatgctttgagatcaaattgctgttcaactttttcatcattgtaaacaa |
584 |
Q |
| |
|
| | ||||| ||||| || |||||||||||||| ||||||| |||||| || |||||||||||| ||||||||||||||| |
|
|
| T |
10517554 |
taataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgtaaacaa |
10517474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 161 - 382
Target Start/End: Complemental strand, 10032415 - 10032194
Alignment:
| Q |
161 |
tcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactt |
260 |
Q |
| |
|
|||| ||| ||||||||||| ||||||||||||||||||||||||| |||||| ||| || || ||| |||||||||| |||||| ||||| ||||||| |
|
|
| T |
10032415 |
tcactgcccaatgcatgctttgagagtaaagaccaacaatcttcatttgatagaagttttagttcatgtataggaaatgtgcatgccacctcagcaactt |
10032316 |
T |
|
| Q |
261 |
tctcttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtc |
360 |
Q |
| |
|
| || |||||||||||| |||||| ||||| ||| || ||||| ||| |||||| ||| || | |||||||| ||||||||| ||||| | || |
|
|
| T |
10032315 |
ttcgttggcgtgttgttataatcaccatgcttccaggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacagatc |
10032216 |
T |
|
| Q |
361 |
gtccaacacaaacaaaattctt |
382 |
Q |
| |
|
||||| |||||||||| |||| |
|
|
| T |
10032215 |
atccaaaacaaacaaaaatctt |
10032194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 170 - 435
Target Start/End: Complemental strand, 10196076 - 10195811
Alignment:
| Q |
170 |
aatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgc |
269 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||||| || ||| ||||||||||||| |||||||||| | ||| ||||| || ||||| |||| || |
|
|
| T |
10196076 |
aatgcatgctttgagagtaaagtccaacaatcttcatttgacagaagttctaatttatgtataggaaatgtgtgtgccacctcagctactttttcttggc |
10195977 |
T |
|
| Q |
270 |
gtgttgttatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacac |
369 |
Q |
| |
|
| |||||||| |||||| ||||| ||| || ||||| ||| |||||| ||| || | ||||||| ||||||||| ||||| | || |||||||| |
|
|
| T |
10195976 |
gcgttgttataatcaccatgcttccaggttttccatcaatgaagggacttactagtgcaatccaatcattataattgtcattccacagatcatccaacac |
10195877 |
T |
|
| Q |
370 |
aaacaaaattcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattgct |
435 |
Q |
| |
|
|||||||| |||| | ||| || | | ||| |||| ||||||||||||| | |||||| |||||| |
|
|
| T |
10195876 |
aaacaaaaatcttttctccctcgagtttttctttaactcaacttgaaggacaccaagatcattgct |
10195811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 77 - 441
Target Start/End: Original strand, 10375418 - 10375782
Alignment:
| Q |
77 |
gcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcat |
176 |
Q |
| |
|
||||| ||||||||||| ||||||||||| |||||||||||||| || ||||| ||| ||| || | || | |||| || |||| || ||||||| |
|
|
| T |
10375418 |
gcagctattggcaatcctccacactttcttgcaatcttcctgcctatttcttcaagggttgtgtttgaactatggtgaaactcatcactacccaatgcat |
10375517 |
T |
|
| Q |
177 |
gcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgt |
276 |
Q |
| |
|
|||| ||||||||||||||||| ||||||| |||||| ||| || || ||| |||||||||| |||||| |||| |||||||| || ||| ||||| |
|
|
| T |
10375518 |
gctttgagagtaaagaccaacagtcttcattcgatagaagttttagttcatgtataggaaatgtgcatgctaccttagcaacttttcgttggcgcgttgt |
10375617 |
T |
|
| Q |
277 |
tatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaa |
376 |
Q |
| |
|
||| |||||| ||||| | | || ||||| ||| |||||| ||| || | |||||||| ||||||||| ||||| | || ||||||||||||||| |
|
|
| T |
10375618 |
tataatcaccatgcttccgggttttccatcaatgaagggacttactagttcaccccaatcataataattgtcattccacaaatcatccaacacaaacaaa |
10375717 |
T |
|
| Q |
377 |
attcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattgctttccca |
441 |
Q |
| |
|
| |||| | ||| | | | ||| |||| ||||| |||||| ||||||||||||||| ||||| |
|
|
| T |
10375718 |
aatcttttctcccttgattttttctttaacgcaactcgaaggacatcaagattattgctatccca |
10375782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 42 - 433
Target Start/End: Complemental strand, 10261229 - 10260838
Alignment:
| Q |
42 |
ctacctttgaatgcattagtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggta |
141 |
Q |
| |
|
||||||||||| | | |||| |||||||| ||| ||||| ||||||||||| ||||||||||| |||||||||||||| | ||||| ||| || | |
|
|
| T |
10261229 |
ctacctttgaacgtagaagtcctccaagtgttttggcagctattggcaatcctccacactttcttgcaatcttcctgcctgtttcttcaagggctgtatt |
10261130 |
T |
|
| Q |
142 |
tttaccccgaagaaattcttcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcg |
241 |
Q |
| |
|
| || | ||| || |||| ||| ||||||||||| ||||||||||||||||| ||||||| |||||| ||| || || ||| |||||||||| | |
|
|
| T |
10261129 |
tgtattatgctgaatctcatcactgcccaatgcatgctttgagagtaaagaccaacagtcttcattcgatagaagttttagttcatgtataggaaatgtg |
10261030 |
T |
|
| Q |
242 |
catgcaacctctgcaactttctcttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagat |
341 |
Q |
| |
|
||||| ||||| |||||||| | || || |||||||| |||||| ||||| ||| || ||||| || ||||| ||| || | |||||||| || |
|
|
| T |
10261029 |
catgccacctcagcaactttttgttgccgcgttgttataatcaccatgcttccaggttttccatcaacgaaggggcttactagttcaccccaatcattat |
10260930 |
T |
|
| Q |
342 |
aattgtcgttccatatgtcgtccaacacaaacaaaattcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattg |
433 |
Q |
| |
|
||||||| ||||| | ||||||||||||||||||| |||| | ||| || | ||| |||| |||||| ||||||| |||||||||||| |
|
|
| T |
10260929 |
aattgtcattccacagatcgtccaacacaaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggatgtcaagattattg |
10260838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 77 - 316
Target Start/End: Complemental strand, 10664022 - 10663783
Alignment:
| Q |
77 |
gcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcat |
176 |
Q |
| |
|
||||| ||||||||||| ||||||||||| |||||||||||||| | ||||| ||| ||| || | || | |||| || || | || ||||||| |
|
|
| T |
10664022 |
gcagctattggcaatcctccacactttcttgcaatcttcctgcctgtttcttcaagggttgtgtttgaactatggtgaaactcgtcgcttcccaatgcat |
10663923 |
T |
|
| Q |
177 |
gcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgt |
276 |
Q |
| |
|
|||| || ||||| |||||||||||||||| |||||| ||||||||||||| |||||||||| | ||| ||||| |||||||| | |||||| ||||| |
|
|
| T |
10663922 |
gctttgaaagtaaggaccaacaatcttcatttgatagaagttctaatttatgtataggaaatgtgtgtgccacctcagcaactttttgttcgcgcgttgt |
10663823 |
T |
|
| Q |
277 |
tatgatcaccttgcttacagtttctccattaatcaaggga |
316 |
Q |
| |
|
||| |||||| ||||| ||| || ||||| ||| |||||| |
|
|
| T |
10663822 |
tataatcaccatgcttccaggttttccatcaatgaaggga |
10663783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 167 - 438
Target Start/End: Complemental strand, 13161386 - 13161115
Alignment:
| Q |
167 |
ccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttctctt |
266 |
Q |
| |
|
|||||||||||||| || ||||| |||||||| || ||||| |||||||| |||| ||| ||||||||||| | | ||||||||| |||||||| | || |
|
|
| T |
13161386 |
ccaaatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgtt |
13161287 |
T |
|
| Q |
267 |
cgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaa |
366 |
Q |
| |
|
||||||||| ||||||||| | ||| | |||| || |||||||| ||||||| |||| |||||||||| |||| | || ||||| | ||||||| |
|
|
| T |
13161286 |
ggcgtgttgtgatgatcaccctacttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccag |
13161187 |
T |
|
| Q |
367 |
cacaaacaaaattcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattgctttc |
438 |
Q |
| |
|
||| ||||||| |||| ||||| |||| | || | || |||||| |||| |||||||||||||||||| |
|
|
| T |
13161186 |
cactaacaaaaatcttttatccctcaagtttttattcaactcaactcgaagagaatcaagattattgctttc |
13161115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 167 - 393
Target Start/End: Complemental strand, 13290071 - 13289845
Alignment:
| Q |
167 |
ccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttctctt |
266 |
Q |
| |
|
|||||||||||||| || ||||| |||||||| || ||||| |||||||| |||| ||| ||||||||||| | | ||||||||| |||||||| | || |
|
|
| T |
13290071 |
ccaaatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgtt |
13289972 |
T |
|
| Q |
267 |
cgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaa |
366 |
Q |
| |
|
||||||||| ||||||||| | ||| | |||| || |||||||| ||||||| |||| |||||||||| |||| | || ||||| | ||||||| |
|
|
| T |
13289971 |
ggcgtgttgtgatgatcaccctacttcctgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccag |
13289872 |
T |
|
| Q |
367 |
cacaaacaaaattcttctatccttcaa |
393 |
Q |
| |
|
||| ||||||| |||| ||||| |||| |
|
|
| T |
13289871 |
caccaacaaaaatcttttatccctcaa |
13289845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 42 - 439
Target Start/End: Complemental strand, 10581132 - 10580735
Alignment:
| Q |
42 |
ctacctttgaatgcattagtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggta |
141 |
Q |
| |
|
||||||||||| | | |||| ||| |||| ||| ||||| ||||||||||| |||||| |||| ||||||||||||||||| ||||| ||| || | |
|
|
| T |
10581132 |
ctacctttgaagggagaagtcctcctagtgttttagcagctattggcaatcccccacaccttcttgcaatcttcctgccaatttcttcaagggctgtatt |
10581033 |
T |
|
| Q |
142 |
tttaccccgaagaaattcttcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcg |
241 |
Q |
| |
|
| ||| | |||| || |||| || ||||||| || ||||||||||||||||||||||||| |||||||||||||| ||||| | || ||| | |
|
|
| T |
10581032 |
tgtactatggtgaaactcatcacttcccaatgcatagtttgagagtaaagaccaacaatcttcatttgatagaggttctaaattatgtacagcaaacatg |
10580933 |
T |
|
| Q |
242 |
catgcaacctctgcaactttctcttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagat |
341 |
Q |
| |
|
||| | || || |||||| | || ||| |||||||| |||||| ||||| ||| || ||||||||| |||||| ||| || | |||||||||| | |
|
|
| T |
10580932 |
tgtgccatctttgtaactttttgttggcgcgttgttataatcaccatgcttccaggttttccattaatgaagggacttactagctcatcccaatcattac |
10580833 |
T |
|
| Q |
342 |
aattgtcgttccatatgtcgtccaacacaaacaaaattcttctat-ccttcaaatgcttcattaattcaacttgaaggatatcaagattattgctttcc |
439 |
Q |
| |
|
||||||| ||||| | || |||||||||||||||| |||| | | |||| | || ||| |||| ||||| |||||| ||||||||||||||||||| |
|
|
| T |
10580832 |
aattgtcattccacagatcatccaacacaaacaaaaatcttttctcccttgagat-tttctttaactcaacacgaaggacatcaagattattgctttcc |
10580735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 515 - 585
Target Start/End: Complemental strand, 8861365 - 8861295
Alignment:
| Q |
515 |
aaatcttccgatacacaaacccatgctttgagatcaaattgctgttcaactttttcatcattgtaaacaag |
585 |
Q |
| |
|
||||| || ||||||||| ||||||||||||||||||| |||| || |||||||||||||||||||||||| |
|
|
| T |
8861365 |
aaatcctctgatacacaagcccatgctttgagatcaaagtgctcttgaactttttcatcattgtaaacaag |
8861295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 515 - 585
Target Start/End: Complemental strand, 10889385 - 10889315
Alignment:
| Q |
515 |
aaatcttccgatacacaaacccatgctttgagatcaaattgctgttcaactttttcatcattgtaaacaag |
585 |
Q |
| |
|
||||| || ||||||||| ||||||||||||||||||| |||| || |||||||||||||||||||||||| |
|
|
| T |
10889385 |
aaatcctcagatacacaagcccatgctttgagatcaaagtgctcttgaactttttcatcattgtaaacaag |
10889315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 515 - 580
Target Start/End: Original strand, 11131016 - 11131081
Alignment:
| Q |
515 |
aaatcttccgatacacaaacccatgctttgagatcaaattgctgttcaactttttcatcattgtaa |
580 |
Q |
| |
|
||||| |||||||||||| ||||||||||||||||||| || | || ||||||||||||||||||| |
|
|
| T |
11131016 |
aaatcctccgatacacaagcccatgctttgagatcaaagtgttcttgaactttttcatcattgtaa |
11131081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 515 - 580
Target Start/End: Original strand, 11148844 - 11148909
Alignment:
| Q |
515 |
aaatcttccgatacacaaacccatgctttgagatcaaattgctgttcaactttttcatcattgtaa |
580 |
Q |
| |
|
||||| |||||||||||| ||||||||||||||||||| || | || ||||||||||||||||||| |
|
|
| T |
11148844 |
aaatcctccgatacacaagcccatgctttgagatcaaagtgttcttgaactttttcatcattgtaa |
11148909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 479 - 585
Target Start/End: Original strand, 10375799 - 10375905
Alignment:
| Q |
479 |
gattcaaggagggacttggttatcctcacgacatcgaaatcttccgatacacaaacccatgctttgagatcaaattgctgttcaactttttcatcattgt |
578 |
Q |
| |
|
||||||||||| |||||||||| |||| | ||| ||||| || || |||||| ||||||| || | |||||| || |||| ||||||||||||||||| |
|
|
| T |
10375799 |
gattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgccttcaaatcaaaatgttgttgaactttttcatcattgt |
10375898 |
T |
|
| Q |
579 |
aaacaag |
585 |
Q |
| |
|
||||||| |
|
|
| T |
10375899 |
aaacaag |
10375905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 10032512 - 10032456
Alignment:
| Q |
64 |
tccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctgcc |
120 |
Q |
| |
|
|||||||| ||| ||||| ||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
10032512 |
tccaagtgttttggcagctattggcaatcctccacactttcttgcaatcttcctgcc |
10032456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 10127459 - 10127381
Alignment:
| Q |
42 |
ctacctttgaatgcattagtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctgcc |
120 |
Q |
| |
|
||||||||||| | | |||| ||| |||| ||| ||||| ||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
10127459 |
ctacctttgaacgtagaagtcctcctagtgttttagcagctattggcaatcctccacactttcttgcaatcttcctgcc |
10127381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 515 - 585
Target Start/End: Original strand, 11160007 - 11160077
Alignment:
| Q |
515 |
aaatcttccgatacacaaacccatgctttgagatcaaattgctgttcaactttttcatcattgtaaacaag |
585 |
Q |
| |
|
||||| || ||||||||| |||||||||||| |||||| || | || ||||||||||| |||||||||||| |
|
|
| T |
11160007 |
aaatcctcagatacacaagcccatgctttgaaatcaaaatgatcttgaactttttcattattgtaaacaag |
11160077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 476 - 585
Target Start/End: Complemental strand, 10088908 - 10088799
Alignment:
| Q |
476 |
acagattcaaggagggacttggttatcctcacgacatcgaaatcttccgatacacaaacccatgctttgagatcaaattgctgttcaactttttcatcat |
575 |
Q |
| |
|
|||||||||||||| ||||| |||| |||| | ||| ||||| || || |||||||||||||| || | |||||| || |||| ||||| || ||||| |
|
|
| T |
10088908 |
acagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatggtgttgaacttctttatcat |
10088809 |
T |
|
| Q |
576 |
tgtaaacaag |
585 |
Q |
| |
|
|||||||||| |
|
|
| T |
10088808 |
tgtaaacaag |
10088799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 476 - 585
Target Start/End: Complemental strand, 10127046 - 10126937
Alignment:
| Q |
476 |
acagattcaaggagggacttggttatcctcacgacatcgaaatcttccgatacacaaacccatgctttgagatcaaattgctgttcaactttttcatcat |
575 |
Q |
| |
|
|||||||||||||| ||||| |||| |||| | ||| ||||| || || |||||||||||||| || | |||||| || |||| ||||| || ||||| |
|
|
| T |
10127046 |
acagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgaacttctttatcat |
10126947 |
T |
|
| Q |
576 |
tgtaaacaag |
585 |
Q |
| |
|
|||||||||| |
|
|
| T |
10126946 |
tgtaaacaag |
10126937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 476 - 585
Target Start/End: Complemental strand, 10195791 - 10195682
Alignment:
| Q |
476 |
acagattcaaggagggacttggttatcctcacgacatcgaaatcttccgatacacaaacccatgctttgagatcaaattgctgttcaactttttcatcat |
575 |
Q |
| |
|
|||||||||||||| ||||| |||| |||| | ||| ||||| || || |||||||||||||| || | |||||| || |||| ||||| || ||||| |
|
|
| T |
10195791 |
acagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatggtgttgaacttctttatcat |
10195692 |
T |
|
| Q |
576 |
tgtaaacaag |
585 |
Q |
| |
|
|||||||||| |
|
|
| T |
10195691 |
tgtaaacaag |
10195682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 476 - 585
Target Start/End: Complemental strand, 10663644 - 10663535
Alignment:
| Q |
476 |
acagattcaaggagggacttggttatcctcacgacatcgaaatcttccgatacacaaacccatgctttgagatcaaattgctgttcaactttttcatcat |
575 |
Q |
| |
|
|||||||||||||| ||||| |||| |||| | ||| ||||| || || |||||||||||||| || | |||||| || |||| ||||| || ||||| |
|
|
| T |
10663644 |
acagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgaacttctttatcat |
10663545 |
T |
|
| Q |
576 |
tgtaaacaag |
585 |
Q |
| |
|
|||||||||| |
|
|
| T |
10663544 |
tgtaaacaag |
10663535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 477 - 585
Target Start/End: Original strand, 10363750 - 10363858
Alignment:
| Q |
477 |
cagattcaaggagggacttggttatcctcacgacatcgaaatcttccgatacacaaacccatgctttgagatcaaattgctgttcaactttttcatcatt |
576 |
Q |
| |
|
||||||||||||| ||||| |||| |||| | ||| ||||| || || |||||||||||||| || | |||||| || |||| ||||| || |||||| |
|
|
| T |
10363750 |
cagattcaaggagagactttgttactctcataatatcaaaatcctcagagacacaaacccatgccttcaaatcaaaatgttgttgaacttctttatcatt |
10363849 |
T |
|
| Q |
577 |
gtaaacaag |
585 |
Q |
| |
|
||||||||| |
|
|
| T |
10363850 |
gtaaacaag |
10363858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 10672178 - 10672135
Alignment:
| Q |
77 |
gcagcaattggcaatccaccacactttctagcaatcttcctgcc |
120 |
Q |
| |
|
||||| ||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
10672178 |
gcagctattggcaatcctccacactttcttgcaatcttcctgcc |
10672135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 243; Significance: 1e-134; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 19 - 585
Target Start/End: Original strand, 17852438 - 17853004
Alignment:
| Q |
19 |
aattgtagtccactccttttcaactacctttgaatgcattagtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctg |
118 |
Q |
| |
|
||||| ||||||||| |||||| ||||||| || ||||||||| || |||||||| ||||| |||||||| ||| |||||||||||| ||||||||| |
|
|
| T |
17852438 |
aattgcagtccactcattttcatctaccttcgagcgcattagtccaccgagtgctttggcagctattggcaagccatcacactttctagatatcttcctg |
17852537 |
T |
|
| Q |
119 |
ccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggtt |
218 |
Q |
| |
|
||||| |||||| |||| |||||||| || || |||||||| |||||||||||||| ||||| |||||||||||||||||||| |||| ||||| |
|
|
| T |
17852538 |
ccaattgcttctaaatttgagtatttactgtgaccaaggtcttcacctccaaatgcatgctttgagagcaaagaccaacaatcttcatcggatataggtt |
17852637 |
T |
|
| Q |
219 |
ctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagt |
318 |
Q |
| |
|
||||||||||||| ||||||| || ||||||||| |||||||| | | ||||||||||||||| ||||||||| ||| || ||| |||| ||||||||| |
|
|
| T |
17852638 |
ctaatttatgaattggaaatgtgcgtgcaacctccgcaactttttttaggcgtgttgttatgatgaccttgcttccagcttttcccttaaacaagggagt |
17852737 |
T |
|
| Q |
319 |
tattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaaattcttctatccttcaaatgcttcattaattcaacttgaagg |
418 |
Q |
| |
|
|| || | | |||||||| |||||||| ||||||| |||||||||||||||||||| |||||||||| |||| || ||||||||||||||| | ||| |
|
|
| T |
17852738 |
tactagctcactccaatcaacgtaattgtcattccataagtcgtccaacacaaacaaaaatcttctatccatcaattgtttcattaattcaactcggagg |
17852837 |
T |
|
| Q |
419 |
atatcaagattattgctttcccagacatttgaattgacagacgttgtgtttctaacaacagattcaaggagggacttggttatcctcacgacatcgaaat |
518 |
Q |
| |
|
||||||||||||| |||||||||||| |||||| || | ||||| ||||||||||||||||||||||| |||||||||| ||||| ||||| |||| |
|
|
| T |
17852838 |
atatcaagattatcgctttcccagacctttgaagcagcaaatgttgtatttctaacaacagattcaaggagagacttggttactctcacaacatcaaaat |
17852937 |
T |
|
| Q |
519 |
cttccgatacacaaacccatgctttgagatcaaattgctgttcaactttttcatcattgtaaacaag |
585 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||| || |||||||| |||||||||||||||||||| |
|
|
| T |
17852938 |
cttctgatacacaaacccaggctttgagatcaaaatgatgttcaaccttttcatcattgtaaacaag |
17853004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 68 - 433
Target Start/End: Complemental strand, 26907402 - 26907037
Alignment:
| Q |
68 |
agtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgc |
167 |
Q |
| |
|
|||| ||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||| ||| || ||| | |||| |||| || | |
|
|
| T |
26907402 |
agtgttttagcagcaattggcaatcctccacactttcttgcaatcttcctgccaatttcttcgagggttgtgttaatactatggtgaaactctttacttc |
26907303 |
T |
|
| Q |
168 |
caaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttc |
267 |
Q |
| |
|
| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||| |||||||||||||| | || |
|
|
| T |
26907302 |
ccaatgcatgctttgagagtaaagaccaacaatcttcagttgatagaggttctaatttatgtataggaaatgtatgtgccacctctgcaactttttgttg |
26907203 |
T |
|
| Q |
268 |
gcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagttattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaac |
367 |
Q |
| |
|
||| |||||||| |||||| ||||| ||| || ||||| ||| |||||| ||| | ||||||||| ||||||||||||||| | ||| |||||| |
|
|
| T |
26907202 |
gcgcgttgttataatcaccatgcttccaggttttccatgaatgaagggacttacaagttcttcccaatcactataattgtcgttccacaggtcatccaac |
26907103 |
T |
|
| Q |
368 |
acaaacaaaattcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattg |
433 |
Q |
| |
|
|||||||||| |||| | ||| | | | ||| |||| |||||| |||||| ||||||||||||| |
|
|
| T |
26907102 |
acaaacaaaaatcttttctcccttgagtttttccttaactcaactcgaaggacatcaagattattg |
26907037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 77; Significance: 2e-35; HSPs: 3)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 438
Target Start/End: Original strand, 145454 - 145873
Alignment:
| Q |
19 |
aattgtagtccactccttttcaactacctttgaatgcattagtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctg |
118 |
Q |
| |
|
||||| ||||||||| ||| || ||||||||||| ||| | || ||| |||| ||| ||||| || |||||||||||||||||| | |||||||| || |
|
|
| T |
145454 |
aattgcagtccactcttttgcatctacctttgaacgcaaaattcctccgagtgttttagcagctatgggcaatccaccacactttttggcaatctttcta |
145553 |
T |
|
| Q |
119 |
ccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggtt |
218 |
Q |
| |
|
||||| |||||||| |||||||| || | | || ||||||| || ||||||||||| || ||||| |||||||| || ||||| |||||||| | |
|
|
| T |
145554 |
ccaatttcttctagatttgggtactttctacctcgacggtcttcacttccgaatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggat |
145653 |
T |
|
| Q |
219 |
ctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagt |
318 |
Q |
| |
|
||| ||| ||||||||||| | | ||||||||| |||||||| | || ||||||||| ||||||||| | ||| | |||| || |||||||| ||||| |
|
|
| T |
145654 |
ctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggcgtgttgtgatgatcaccatacttcccgttttgccgttaatcaatggagt |
145753 |
T |
|
| Q |
319 |
tattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaaattcttctatccttcaaatgcttcatt-aattcaacttgaag |
417 |
Q |
| |
|
|| |||| |||||||||| |||| | || ||||| | ||||||| ||| ||||||| |||| ||||| |||| | || ||| ||||||||| |||| |
|
|
| T |
145754 |
tactaactcatcccaatcattataactatcattccacagatcgtccagcactaacaaaaatcttttatccctcaagt-tttgattcaattcaactcgaag |
145852 |
T |
|
| Q |
418 |
gatatcaagattattgctttc |
438 |
Q |
| |
|
| ||||||||||||| |||| |
|
|
| T |
145853 |
aaaatcaagattattgttttc |
145873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 19 - 438
Target Start/End: Original strand, 135403 - 135822
Alignment:
| Q |
19 |
aattgtagtccactccttttcaactacctttgaatgcattagtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctg |
118 |
Q |
| |
|
||||| ||||||||| ||| || ||||||||||| ||| | || ||| |||| ||| | ||| || |||||||||||||||||| | |||||||| || |
|
|
| T |
135403 |
aattgcagtccactcttttgcatctacctttgaacgcaaaattcctccgagtgttttaggagctatgggcaatccaccacactttttggcaatctttcta |
135502 |
T |
|
| Q |
119 |
ccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggtt |
218 |
Q |
| |
|
||||| |||||||| |||||||| || | | || ||||||| || ||||||||||| || ||||| |||||||| || ||||| |||||||| | |
|
|
| T |
135503 |
ccaatttcttctagatttgggtactttctacctcgacggtcttcacttccgaatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggat |
135602 |
T |
|
| Q |
219 |
ctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgttatgatcaccttgcttacagtttctccattaatcaagggagt |
318 |
Q |
| |
|
||| ||| ||||||||||| | | ||||||||| |||||||| | || ||||||||| ||||||||| | ||| | |||| || |||||||| ||||| |
|
|
| T |
135603 |
ctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggcgtgttgtgatgatcaccatacttcccgttttgccgttaatcaatggagt |
135702 |
T |
|
| Q |
319 |
tattaaccgatcccaatcaagataattgtcgttccatatgtcgtccaacacaaacaaaattcttctatccttcaaatgcttcatt-aattcaacttgaag |
417 |
Q |
| |
|
|| |||| |||||||||| |||| | || ||||| | ||||||| ||| ||||||| |||| ||||| |||| | || ||| ||||||||| |||| |
|
|
| T |
135703 |
tactaactcatcccaatcattataactatcattccacagatcgtccagcactaacaaaaatcttttatccctcaagt-tttgattcaattcaactcgaag |
135801 |
T |
|
| Q |
418 |
gatatcaagattattgctttc |
438 |
Q |
| |
|
| ||||||||||||| |||| |
|
|
| T |
135802 |
aaaatcaagattattgttttc |
135822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 19 - 286
Target Start/End: Original strand, 153759 - 154026
Alignment:
| Q |
19 |
aattgtagtccactccttttcaactacctttgaatgcattagtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctg |
118 |
Q |
| |
|
||||| ||||||||| ||| || ||||||||||| ||| | || ||| |||| ||| ||||| || |||||||||||||||||| | |||||||| || |
|
|
| T |
153759 |
aattgcagtccactcttttgcatctacctttgaacgcaaaattcctccgagtgttttagcagctatgggcaatccaccacactttttggcaatctttcta |
153858 |
T |
|
| Q |
119 |
ccaatctcttctaggtttgggtatttaccccgaagaaattcttcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggtt |
218 |
Q |
| |
|
||||| |||||||| |||||||| || | | || ||||||| || ||||||||||| || ||||| |||||||| || ||||| |||||||| | |
|
|
| T |
153859 |
ccaatttcttctagatttgggtactttctacctcgacggtcttcacttccgaatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggat |
153958 |
T |
|
| Q |
219 |
ctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcgcgtgttgttatgatcacc |
286 |
Q |
| |
|
||| ||| ||||||||||| | | ||||||||| |||||||| | || ||||||||| ||||||||| |
|
|
| T |
153959 |
ctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggcgtgttgtgatgatcacc |
154026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 59 - 237
Target Start/End: Original strand, 31679288 - 31679466
Alignment:
| Q |
59 |
agtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggtatttaccccgaagaaatt |
158 |
Q |
| |
|
|||| |||||||| ||| ||||| ||||||||||| | ||||||| | ||||||||||| ||||| |||||||| |||||||||||| | | || || |
|
|
| T |
31679288 |
agtcctccaagtgttttggcagctattggcaatccgcaacacttttttgcaatcttcctaccaattgcttctaggcttgggtatttacggccacaaagtt |
31679387 |
T |
|
| Q |
159 |
cttcaccgccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaa |
237 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||||| |||||||| |
|
|
| T |
31679388 |
cttcacttccaaatgcatgctttgagagtaaagaccagcaatcatcatctgatagaggttctaatttatagataggaaa |
31679466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 826317 - 826198
Alignment:
| Q |
167 |
ccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttctctt |
266 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||| ||| || ||||||||||| ||||||||||||||| | | |||||||||||||||| | || | |
|
|
| T |
826317 |
ccaaatgcatacttggagagtaaagaccaacaatgttcgtccgatagaggttccaatttatgaataggatacgtatgtgcaacctctgcaactctttcgt |
826218 |
T |
|
| Q |
267 |
cgcgtgttgttatgatcacc |
286 |
Q |
| |
|
||||||||| ||||||||| |
|
|
| T |
826217 |
agcgtgttgtgatgatcacc |
826198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 826398 - 826330
Alignment:
| Q |
77 |
gcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttctaggtttgggtattta |
145 |
Q |
| |
|
||||| ||||||||||||||||||||| | ||||||||| | ||||| |||||| | ||||||||||| |
|
|
| T |
826398 |
gcagctattggcaatccaccacacttttttgcaatcttcttcccaattgcttctaaggttgggtattta |
826330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 57958 - 58045
Alignment:
| Q |
42 |
ctacctttgaatgcattagtcttccaagtgcttttgcagcaattggcaatccaccacactttctagcaatcttcctgccaatctcttc |
129 |
Q |
| |
|
||||||||||| | | |||| ||| |||| ||| ||||| ||||||||||| |||||| |||| ||||||||||||||||| ||||| |
|
|
| T |
57958 |
ctacctttgaaaggagaagtcctcctagtgttttagcagctattggcaatcccccacaccttcttgcaatcttcctgccaatttcttc |
58045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 292
Target Start/End: Complemental strand, 29837044 - 29836921
Alignment:
| Q |
169 |
aaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcaacctctgcaactttctcttcg |
268 |
Q |
| |
|
||||||| ||| ||||||||| |||| | ||||| || |||||| || ||||||||||||| ||||||| | | || ||||||||||| ||| ||| |
|
|
| T |
29837044 |
aaatgcacactttgagagtaaatgccaagagtcttcgtccgatagatgtgctaatttatgaatgtgaaatgcacgtacagcctctgcaactctctgttca |
29836945 |
T |
|
| Q |
269 |
cgtgttgttatgatcaccttgctt |
292 |
Q |
| |
|
|||||||| ||||| ||||||||| |
|
|
| T |
29836944 |
cgtgttgtaatgattaccttgctt |
29836921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University