View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7066_low_8 (Length: 391)

Name: NF7066_low_8
Description: NF7066
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7066_low_8
NF7066_low_8
[»] scaffold0009 (3 HSPs)
scaffold0009 (48-376)||(256962-257290)
scaffold0009 (186-376)||(214715-214908)
scaffold0009 (89-159)||(99156-99226)
[»] chr8 (25 HSPs)
chr8 (56-158)||(11541895-11541999)
chr8 (54-158)||(22883680-22883784)
chr8 (54-158)||(22725613-22725718)
chr8 (54-159)||(25607788-25607895)
chr8 (81-146)||(16000085-16000150)
chr8 (89-158)||(26009321-26009390)
chr8 (89-161)||(5851387-5851459)
chr8 (89-156)||(11599965-11600032)
chr8 (89-159)||(15931212-15931282)
chr8 (92-158)||(24265885-24265951)
chr8 (87-158)||(20707678-20707749)
chr8 (87-158)||(21234240-21234311)
chr8 (89-148)||(22738186-22738245)
chr8 (55-158)||(19334188-19334293)
chr8 (87-156)||(18043364-18043433)
chr8 (89-158)||(22499519-22499588)
chr8 (93-158)||(29295769-29295834)
chr8 (89-149)||(17283134-17283194)
chr8 (54-148)||(23216557-23216651)
chr8 (92-158)||(24554793-24554859)
chr8 (93-159)||(27233412-27233478)
chr8 (92-158)||(33170141-33170207)
chr8 (89-158)||(17264388-17264457)
chr8 (93-158)||(17499747-17499812)
chr8 (95-148)||(39116498-39116551)
[»] scaffold0032 (3 HSPs)
scaffold0032 (54-158)||(122127-122231)
scaffold0032 (87-158)||(102008-102079)
scaffold0032 (89-158)||(106824-106893)
[»] chr3 (34 HSPs)
chr3 (54-159)||(15988419-15988525)
chr3 (87-158)||(39653731-39653802)
chr3 (89-158)||(5230827-5230896)
chr3 (91-158)||(40041777-40041844)
chr3 (54-159)||(14182567-14182674)
chr3 (81-148)||(55513904-55513971)
chr3 (89-159)||(12019813-12019883)
chr3 (82-159)||(11517658-11517735)
chr3 (87-156)||(17202531-17202600)
chr3 (93-149)||(14889783-14889839)
chr3 (54-158)||(17390892-17391000)
chr3 (93-158)||(6230877-6230942)
chr3 (54-159)||(8687760-8687865)
chr3 (54-159)||(9039629-9039734)
chr3 (89-158)||(15548398-15548467)
chr3 (89-158)||(15874084-15874153)
chr3 (93-158)||(21168923-21168988)
chr3 (93-158)||(34557759-34557824)
chr3 (95-158)||(11884446-11884509)
chr3 (91-158)||(23888374-23888441)
chr3 (87-158)||(38378381-38378452)
chr3 (92-159)||(43429756-43429822)
chr3 (89-159)||(325323-325393)
chr3 (93-159)||(13330742-13330808)
chr3 (89-159)||(14286895-14286965)
chr3 (92-158)||(31416433-31416499)
chr3 (94-156)||(41659507-41659569)
chr3 (89-158)||(11988401-11988470)
chr3 (89-158)||(12950459-12950528)
chr3 (89-158)||(37919094-37919163)
chr3 (93-149)||(4164463-4164519)
chr3 (95-159)||(14820045-14820109)
chr3 (87-163)||(17320789-17320865)
chr3 (97-145)||(24902105-24902153)
[»] chr7 (34 HSPs)
chr7 (54-158)||(3194198-3194303)
chr7 (89-158)||(14279117-14279186)
chr7 (89-158)||(15980726-15980795)
chr7 (89-148)||(13387890-13387949)
chr7 (89-158)||(9058834-9058903)
chr7 (54-154)||(12245586-12245687)
chr7 (87-159)||(5617345-5617417)
chr7 (87-158)||(17948238-17948309)
chr7 (89-158)||(16915539-16915608)
chr7 (89-158)||(34243354-34243423)
chr7 (89-158)||(48345478-48345547)
chr7 (87-159)||(9609133-9609205)
chr7 (87-159)||(9836705-9836777)
chr7 (54-159)||(39294330-39294437)
chr7 (96-163)||(14938593-14938660)
chr7 (96-163)||(15366186-15366253)
chr7 (95-158)||(19065155-19065218)
chr7 (89-163)||(4444171-4444245)
chr7 (92-158)||(21677713-21677779)
chr7 (93-158)||(14303063-14303128)
chr7 (89-158)||(17230322-17230391)
chr7 (89-149)||(16930177-16930237)
chr7 (89-149)||(16935560-16935620)
chr7 (89-148)||(15953822-15953881)
chr7 (95-158)||(16381803-16381866)
chr7 (99-158)||(17926734-17926793)
chr7 (93-159)||(19380851-19380917)
chr7 (93-158)||(15305335-15305400)
chr7 (89-162)||(15762806-15762879)
chr7 (89-158)||(16651431-16651500)
chr7 (89-158)||(17625791-17625860)
chr7 (93-158)||(18366234-18366299)
chr7 (93-158)||(31499135-31499200)
chr7 (94-158)||(12182130-12182194)
[»] scaffold0561 (1 HSPs)
scaffold0561 (54-163)||(4919-5030)
[»] chr1 (17 HSPs)
chr1 (89-159)||(21193050-21193120)
chr1 (89-158)||(17606816-17606885)
chr1 (89-158)||(27672677-27672746)
chr1 (87-163)||(20957241-20957317)
chr1 (54-158)||(20191653-20191759)
chr1 (89-158)||(25090964-25091033)
chr1 (89-158)||(37236172-37236241)
chr1 (92-159)||(40555264-40555331)
chr1 (91-161)||(19601080-19601150)
chr1 (89-158)||(22148615-22148683)
chr1 (96-158)||(50002167-50002229)
chr1 (94-159)||(78711-78776)
chr1 (93-158)||(16243629-16243694)
chr1 (94-159)||(17021446-17021511)
chr1 (89-158)||(20820354-20820423)
chr1 (89-158)||(21041682-21041751)
chr1 (93-158)||(21223612-21223677)
[»] chr4 (26 HSPs)
chr4 (89-158)||(7966816-7966885)
chr4 (89-158)||(54366263-54366332)
chr4 (54-158)||(12136461-12136567)
chr4 (89-163)||(18274696-18274770)
chr4 (89-158)||(24236830-24236899)
chr4 (89-158)||(42706675-42706744)
chr4 (89-158)||(12729297-12729366)
chr4 (89-158)||(19624248-19624317)
chr4 (54-158)||(14569296-14569400)
chr4 (107-158)||(15216392-15216443)
chr4 (87-158)||(41258592-41258663)
chr4 (92-158)||(12370654-12370720)
chr4 (92-158)||(47470552-47470618)
chr4 (92-158)||(50224374-50224440)
chr4 (89-158)||(12246450-12246519)
chr4 (89-158)||(15853497-15853566)
chr4 (89-158)||(17196236-17196305)
chr4 (78-158)||(5407062-5407142)
chr4 (89-159)||(13815059-13815129)
chr4 (89-159)||(55379116-55379186)
chr4 (94-163)||(12338883-12338952)
chr4 (93-158)||(13449232-13449296)
chr4 (89-158)||(14503753-14503822)
chr4 (89-158)||(27958942-27959011)
chr4 (93-145)||(12350870-12350922)
chr4 (89-149)||(41919462-41919522)
[»] scaffold0725 (1 HSPs)
scaffold0725 (82-158)||(6976-7052)
[»] chr6 (26 HSPs)
chr6 (54-159)||(29163093-29163200)
chr6 (89-159)||(12311218-12311288)
chr6 (89-159)||(6092418-6092488)
chr6 (54-158)||(16131147-16131253)
chr6 (93-159)||(21621016-21621082)
chr6 (89-159)||(25917578-25917648)
chr6 (93-158)||(17085767-17085832)
chr6 (90-163)||(22364450-22364523)
chr6 (89-163)||(14150463-14150537)
chr6 (89-163)||(15006844-15006918)
chr6 (89-158)||(21927454-21927524)
chr6 (89-163)||(21929327-21929401)
chr6 (93-159)||(25782577-25782643)
chr6 (54-158)||(17858546-17858651)
chr6 (89-158)||(22595875-22595944)
chr6 (87-158)||(17791374-17791445)
chr6 (92-159)||(19670425-19670491)
chr6 (89-159)||(17375926-17375996)
chr6 (113-155)||(18017713-18017755)
chr6 (89-159)||(22846012-22846082)
chr6 (93-159)||(25649144-25649210)
chr6 (89-159)||(29531750-29531820)
chr6 (92-158)||(34964822-34964888)
chr6 (89-162)||(1553496-1553569)
chr6 (93-158)||(16373877-16373942)
chr6 (89-161)||(16828366-16828439)
[»] scaffold0090 (1 HSPs)
scaffold0090 (89-160)||(7355-7426)
[»] scaffold0808 (1 HSPs)
scaffold0808 (54-158)||(5236-5342)
[»] scaffold0138 (1 HSPs)
scaffold0138 (89-163)||(24643-24717)
[»] scaffold0010 (1 HSPs)
scaffold0010 (89-159)||(28993-29063)
[»] chr2 (18 HSPs)
chr2 (81-159)||(25593127-25593205)
chr2 (89-158)||(25303476-25303545)
chr2 (87-158)||(19436132-19436203)
chr2 (89-158)||(5480-5549)
chr2 (89-148)||(22138025-22138084)
chr2 (55-156)||(19643763-19643865)
chr2 (93-159)||(24381660-24381726)
chr2 (89-159)||(32738355-32738425)
chr2 (89-158)||(6092343-6092412)
chr2 (93-158)||(45620658-45620723)
chr2 (89-165)||(22582214-22582290)
chr2 (78-158)||(34875919-34875999)
chr2 (87-158)||(19647975-19648046)
chr2 (92-158)||(24271938-24272004)
chr2 (89-158)||(9783080-9783149)
chr2 (89-158)||(19655404-19655473)
chr2 (89-158)||(24839315-24839384)
chr2 (95-158)||(20270820-20270884)
[»] scaffold0409 (2 HSPs)
scaffold0409 (90-163)||(3033-3106)
scaffold0409 (90-163)||(11288-11361)
[»] scaffold0086 (1 HSPs)
scaffold0086 (82-163)||(34352-34433)
[»] scaffold0031 (1 HSPs)
scaffold0031 (89-158)||(99405-99474)
[»] scaffold0025 (2 HSPs)
scaffold0025 (89-158)||(2377-2446)
scaffold0025 (89-163)||(51197-51271)
[»] scaffold0028 (2 HSPs)
scaffold0028 (87-159)||(77622-77694)
scaffold0028 (89-158)||(70514-70583)
[»] scaffold1949 (1 HSPs)
scaffold1949 (87-158)||(1091-1162)
[»] scaffold0390 (2 HSPs)
scaffold0390 (89-148)||(16164-16223)
scaffold0390 (91-148)||(3180-3237)
[»] scaffold0107 (1 HSPs)
scaffold0107 (87-158)||(11327-11398)
[»] scaffold0073 (2 HSPs)
scaffold0073 (94-149)||(49390-49445)
scaffold0073 (94-149)||(53921-53976)
[»] scaffold0049 (1 HSPs)
scaffold0049 (89-156)||(35114-35181)
[»] scaffold0216 (1 HSPs)
scaffold0216 (91-149)||(23325-23383)
[»] scaffold0047 (2 HSPs)
scaffold0047 (89-159)||(2332-2402)
scaffold0047 (89-148)||(73498-73557)
[»] chr5 (18 HSPs)
chr5 (54-159)||(11765889-11765995)
chr5 (90-156)||(33628768-33628834)
chr5 (54-159)||(37985730-37985836)
chr5 (90-159)||(11963146-11963215)
chr5 (89-158)||(13793026-13793095)
chr5 (93-158)||(3421050-3421115)
chr5 (93-158)||(5623636-5623701)
chr5 (89-158)||(14345883-14345952)
chr5 (268-329)||(21321533-21321594)
chr5 (87-148)||(32968398-32968459)
chr5 (90-158)||(16837949-16838017)
chr5 (92-159)||(22879786-22879853)
chr5 (90-149)||(24228155-24228214)
chr5 (93-159)||(23236627-23236693)
chr5 (93-158)||(6454594-6454659)
chr5 (89-158)||(10780670-10780739)
chr5 (89-158)||(19871804-19871873)
chr5 (89-158)||(20318985-20319054)
[»] scaffold1068 (1 HSPs)
scaffold1068 (89-158)||(1210-1279)
[»] scaffold0456 (1 HSPs)
scaffold0456 (89-158)||(12869-12938)
[»] scaffold0080 (1 HSPs)
scaffold0080 (89-158)||(25828-25897)
[»] scaffold0017 (1 HSPs)
scaffold0017 (89-158)||(10175-10244)
[»] scaffold0013 (1 HSPs)
scaffold0013 (89-158)||(33367-33436)
[»] scaffold0006 (1 HSPs)
scaffold0006 (89-158)||(199557-199626)
[»] scaffold0503 (1 HSPs)
scaffold0503 (89-149)||(9258-9318)
[»] scaffold0005 (1 HSPs)
scaffold0005 (54-158)||(247976-248080)
[»] scaffold0003 (1 HSPs)
scaffold0003 (87-159)||(99036-99108)
[»] scaffold0786 (1 HSPs)
scaffold0786 (89-148)||(4647-4706)
[»] scaffold0236 (1 HSPs)
scaffold0236 (87-158)||(25581-25652)
[»] scaffold0174 (2 HSPs)
scaffold0174 (87-158)||(464-535)
scaffold0174 (93-158)||(22779-22844)
[»] scaffold0387 (1 HSPs)
scaffold0387 (89-159)||(3240-3310)
[»] scaffold0327 (1 HSPs)
scaffold0327 (89-159)||(7099-7169)
[»] scaffold0231 (1 HSPs)
scaffold0231 (93-163)||(15558-15628)
[»] scaffold0175 (1 HSPs)
scaffold0175 (89-159)||(7393-7462)
[»] scaffold0162 (1 HSPs)
scaffold0162 (89-163)||(17075-17149)
[»] scaffold0385 (1 HSPs)
scaffold0385 (89-158)||(12679-12748)
[»] scaffold0193 (1 HSPs)
scaffold0193 (95-163)||(2828-2896)
[»] scaffold0112 (1 HSPs)
scaffold0112 (95-163)||(4779-4847)
[»] scaffold0020 (1 HSPs)
scaffold0020 (78-158)||(103876-103955)
[»] scaffold0480 (1 HSPs)
scaffold0480 (95-158)||(11220-11283)
[»] scaffold0258 (1 HSPs)
scaffold0258 (93-156)||(8197-8260)
[»] scaffold0148 (1 HSPs)
scaffold0148 (87-158)||(35814-35884)
[»] scaffold0329 (1 HSPs)
scaffold0329 (69-159)||(1011-1101)
[»] scaffold0161 (1 HSPs)
scaffold0161 (95-157)||(25281-25343)
[»] scaffold0022 (1 HSPs)
scaffold0022 (89-159)||(107114-107184)
[»] scaffold0133 (1 HSPs)
scaffold0133 (93-158)||(3901-3965)
[»] scaffold0331 (1 HSPs)
scaffold0331 (54-110)||(11292-11348)
[»] scaffold0292 (1 HSPs)
scaffold0292 (89-149)||(8851-8911)
[»] scaffold0225 (1 HSPs)
scaffold0225 (88-163)||(27682-27758)
[»] scaffold0104 (1 HSPs)
scaffold0104 (95-162)||(50887-50955)


Alignment Details
Target: scaffold0009 (Bit Score: 261; Significance: 1e-145; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 48 - 376
Target Start/End: Original strand, 256962 - 257290
Alignment:
Q  48 atgaactttatatatgcatgttgttgatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaat 147  Q
    ||||||||||||||||||| |||||||||||| |||||||  ||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||    
T  256962 atgaactttatatatgcatattgttgatagttgttgaaaacatagcgtctatttcttaaatatatgttttattcgtgtgttttatcacttgaatagaaat 257061  T
Q  148 agagcgttacacgttgttgacatgatatttcatatttaatatataggatcaaagcctaactcctcttatttcatgtaggataggatataaaaggatcagt 247  Q
    |||| |||||| | |||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  257062 agagtgttacatgctgttcacttgatatttcatattttatatataggatcaaagcctaactcctcttatttcatgtaggataggatataaaaggatcggt 257161  T
Q  248 aaaactatgaagtatgaattgaaattattcatgaatctcgttttttatcctaacaacgtccaagtacgatttcccctttatcctactttcaatgtatcca 347  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  257162 aaaactatgaagtatgaattgaaattattcatgaatctcgttttttatcctaacaacatccaagtacgatttcccctttatcctacttgcaatgtatcca 257261  T
Q  348 ttgaggaaatctgcagtaggcattgtttt 376  Q
    ||||||||||||||||||||||| |||||    
T  257262 ttgaggaaatctgcagtaggcatagtttt 257290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 186 - 376
Target Start/End: Original strand, 214715 - 214908
Alignment:
Q  186 atatataggatcaaagcctaactcctcttatttcatgtaggataggatataaaaggatcagtaaaactatgaagtatgaattgaaat---tattcatgaa 282  Q
    |||||||||| |||||||||| |||||||||||||| ||| |||||||||||||||||| | ||| |||||||||||||| ||||||   ||||||||||    
T  214715 atatataggaccaaagcctaattcctcttatttcatatagtataggatataaaaggatcggcaaagctatgaagtatgaactgaaattactattcatgaa 214814  T
Q  283 tctcgttttttatcctaacaacgtccaagtacgatttcccctttatcctactttcaatgtatccattgaggaaatctgcagtaggcattgtttt 376  Q
    |||||||||| ||||||| ||| |||||||| || |||||||||||| | ||| ||| |||||| ||||||||||||| ||||| || ||||||    
T  214815 tctcgtttttgatcctaagaacatccaagtatgacttcccctttatcttgcttgcaaggtatcccttgaggaaatctgaagtagccactgtttt 214908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 99156 - 99226
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||||||| ||||| | | |||||| ||||||||||| ||| ||||||||||| |||||||||    
T  99156 gtagcgtctatttcttgaatatttatattattcacgtgtattatcgctttaatagaaatagggcgttacac 99226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 6e-22; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 56 - 158
Target Start/End: Complemental strand, 11541999 - 11541895
Alignment:
Q  56 tatatatgcatgttg--ttgatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcg 153  Q
    |||||||||||||||  ||| |  |||||| | ||||||||||||||||||||||| ||||||||||||||||| ||||| ||| ||||||||||| |||    
T  11541999 tatatatgcatgttgatttggtttttattgtagatgtagcgtctatttcttaaataaatgttttattcgcgtgttttatcgctttaatagaaatagggcg 11541900  T
Q  154 ttaca 158  Q
    |||||    
T  11541899 ttaca 11541895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 22883784 - 22883680
Alignment:
Q  54 tttatatatgcatgttgttgatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcg 153  Q
    |||||| |||||||||| || || || ||||| | |||||||||||||||| ||| |||||||||||||||||| ||||| ||| |||| |||||| |||    
T  22883784 tttatacatgcatgttgatgttatttgttgaagacgtagcgtctatttcttgaatttatgttttattcgcgtgttttatcgctttaatataaatagggcg 22883685  T
Q  154 ttaca 158  Q
    |||||    
T  22883684 ttaca 22883680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 22725613 - 22725718
Alignment:
Q  54 tttatatatgcatgttgtt-gatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagc 152  Q
    ||||||||||||||||||| |||| || ||||| |||||||||||||||||| ||||| ||  |||||| ||||| ||||| ||| |||||||||||  |    
T  22725613 tttatatatgcatgttgtttgatatttgttgaagatgtagcgtctatttcttgaatatttggattattcacgtgttttatcgctttaatagaaataggac 22725712  T
Q  153 gttaca 158  Q
    ||||||    
T  22725713 gttaca 22725718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 25607895 - 25607788
Alignment:
Q  54 tttatatatgcatgttgtt--gatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagag 151  Q
    |||||||||||||||||||  ||| ||| ||||| | ||||| |||||||||| |||||||||||||||||| ||| ||||| ||| ||||||| ||| |    
T  25607895 tttatatatgcatgttgtttagattgttgttgaagaagtagcatctatttcttgaatatatgttttattcgcatgttttatcgctttaatagaagtaggg 25607796  T
Q  152 cgttacac 159  Q
     |||||||    
T  25607795 agttacac 25607788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 81 - 146
Target Start/End: Complemental strand, 16000150 - 16000085
Alignment:
Q  81 ttgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaa 146  Q
    ||||| ||||||||||||||||||||||||||| |||||||| || | ||||||||| ||||||||    
T  16000150 ttgaagatgtagcgtctatttcttaaatatatgctttattcgtgtattttatcactttaatagaaa 16000085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 26009390 - 26009321
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||| ||||||||||| |||||||||||||||||||||| ||||| ||| |||| |||||| ||||||||    
T  26009390 gtagtgtctatttcttgaatatatgttttattcgcgtgttttatcgctttaatataaatagggcgttaca 26009321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 5851459 - 5851387
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgt 161  Q
    |||| ||||||||||| ||||||||| |||||||||||| ||||| ||| ||||||||||| | |||||||||    
T  5851459 gtagtgtctatttcttgaatatatgtattattcgcgtgttttatcgctttaatagaaatagggtgttacacgt 5851387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 156
Target Start/End: Complemental strand, 11600032 - 11599965
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgtta 156  Q
    |||||||||||||||| |||||||| ||||||||||||| |||||  || ||||||||||| ||||||    
T  11600032 gtagcgtctatttcttgaatatatgctttattcgcgtgttttatcgttttaatagaaatagggcgtta 11599965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 15931282 - 15931212
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||  ||| |||| |||||| |||||||||    
T  15931282 gtagcgtctatttcttgaatatatgtattattcgcgtgttttattgctttaataaaaatagggcgttacac 15931212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 24265951 - 24265885
Alignment:
Q  92 gcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||||||||| ||||| | | |||||||||||| |||||||||||||| |||||| ||||||||    
T  24265951 gcgtctatttcttgaatatttatattattcgcgtgttttatcacttaaataaaaatagggcgttaca 24265885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 20707749 - 20707678
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||| ||||||||||||| ||||| ||| |||||| ||||| ||||| ||| ||||||||||| ||||||||    
T  20707749 atgtggcgtctatttcttgaatatttgtattattcacgtgttttatcgctttaatagaaatagggcgttaca 20707678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 21234240 - 21234311
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||| ||||||||||||| ||||| | | |||||||||||| ||||||||| |||||||||||  |||||||    
T  21234240 atgtggcgtctatttcttgaatatttatattattcgcgtgttttatcactttaatagaaataggacgttaca 21234311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 22738186 - 22738245
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaata 148  Q
    |||||||||||||||| ||||||||||||||||||| || ||||| |||  |||||||||    
T  22738186 gtagcgtctatttcttgaatatatgttttattcgcgagttttatcgctttgatagaaata 22738245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 19334188 - 19334293
Alignment:
Q  55 ttatatatgcatgttgtt--gatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagc 152  Q
    ||||||||||||||||||  |||  || ||||  | ||| |||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||| ||    
T  19334188 ttatatatgcatgttgtttggatttttgttgatgacgtaacgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggc 19334287  T
Q  153 gttaca 158  Q
    ||||||    
T  19334288 gttaca 19334293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 18043364 - 18043433
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgtta 156  Q
    |||| ||||||||||||| ||||| ||| |||||||||||| ||||| ||| ||||||||| | ||||||    
T  18043364 atgtggcgtctatttcttgaatatttgtattattcgcgtgttttatcgctttaatagaaattgggcgtta 18043433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 22499519 - 22499588
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||| | | |||||| ||||| ||||| ||| ||||||||||| ||||||||    
T  22499519 gtagcgtctatttcttgaatatttatattattcacgtgttttatcgctttaatagaaatagggcgttaca 22499588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 29295834 - 29295769
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||| ||||||||  ||||||| |||| ||||| ||| ||||||||||| ||||||||    
T  29295834 cgtctatttcttgaatatatgccttattcgtgtgttttatcgctttaatagaaatagggcgttaca 29295769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 17283194 - 17283134
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatag 149  Q
    ||||||||||||| || |||||||| |||||||||| || ||||| ||| |||||||||||    
T  17283194 gtagcgtctatttattgaatatatgctttattcgcgagttttatcgctttaatagaaatag 17283134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 148
Target Start/End: Complemental strand, 23216651 - 23216557
Alignment:
Q  54 tttatatatgcatgttgttgatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaata 148  Q
    |||||||||||||||||||   | || ||||| | ||| |||||||||||| ||||| | | |||||||||||| |||||  || ||||||||||    
T  23216651 tttatatatgcatgttgtttggatttgttgaagacgtaacgtctatttcttgaatatttatattattcgcgtgttttatcgttttaatagaaata 23216557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 24554793 - 24554859
Alignment:
Q  92 gcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||||||||| ||||| | | |||||||||||| ||||| ||| |||||| |||| ||||||||    
T  24554793 gcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagagatagggcgttaca 24554859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 27233412 - 27233478
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||| ||||| | | |||||||||||| ||| | ||| ||||||||||| |||||||||    
T  27233412 cgtctatttcttgaatatttatattattcgcgtgttttaccgctttaatagaaatagggcgttacac 27233478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 33170207 - 33170141
Alignment:
Q  92 gcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||||||||| ||||| | | |||||||||||| ||||| ||| |||| |||||| ||||||||    
T  33170207 gcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaataaaaatagggcgttaca 33170141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 17264457 - 17264388
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||| ||||||||||| ||||| | ||||||||| |||| ||||| ||| ||||||||||| || |||||    
T  17264457 gtagtgtctatttcttgaatatttattttattcgtgtgttttatcgctttaatagaaatagggcattaca 17264388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 17499812 - 17499747
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||| ||| ||||||||    
T  17499812 cgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaagtagggcgttaca 17499747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 39116498 - 39116551
Alignment:
Q  95 tctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaata 148  Q
    ||||||||||||||| ||||| ||||||| ||| ||||| ||| ||||||||||    
T  39116498 tctatttcttaaataaatgttgtattcgcatgttttatcgctttaatagaaata 39116551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 53; Significance: 3e-21; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 122127 - 122231
Alignment:
Q  54 tttatatatgcatgttgttgatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcg 153  Q
    ||||||||||||||||| || || ||| | || | |||||||||||||||| |||||||||| ||||||||||| ||||| ||| ||||||||||| |||    
T  122127 tttatatatgcatgttgatgttatttactaaagacgtagcgtctatttcttgaatatatgttctattcgcgtgttttatcgctttaatagaaatagggcg 122226  T
Q  154 ttaca 158  Q
    |||||    
T  122227 ttaca 122231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 102008 - 102079
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||||| ||||||  | |||||||| ||| ||||| ||| ||||||||||| ||||||||    
T  102008 atgtagcgtctatttcttgaatataattattattcgcatgttttatccctttaatagaaatagggcgttaca 102079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 106824 - 106893
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| |||||   | |||||||| ||| ||||| ||| ||||||||||| ||||||||    
T  106824 gtagcgtctatttcttgaatattattattattcgcttgttttatcgctttaatagaaatagggcgttaca 106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 3e-21; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 15988525 - 15988419
Alignment:
Q  54 tttatatatgcatgttg--ttgatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagag 151  Q
    |||||||||||||||||  ||| |  |||||||| | |||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||| |    
T  15988525 tttatatatgcatgttgatttggtttttattgaagacgtagcgtctatttcttgaataaatgttttattcgcgtgttttatcgcttaaatagaaatag-g 15988427  T
Q  152 cgttacac 159  Q
    ||||||||    
T  15988426 cgttacac 15988419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 39653802 - 39653731
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||||||||||||||||||||||| |||||||||| || ||||| ||| ||||||||||| ||||||||    
T  39653802 atgtagcgtctatttcttaaatatatgctttattcgcgagttttatcgctttaatagaaatagggcgttaca 39653731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 5230827 - 5230896
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| |||||||| ||||||||||||| ||||||||  ||||||||||| ||||||||    
T  5230827 gtagcgtctatttcttgaatatatgctttattcgcgtgttttatcactgtaatagaaatagggcgttaca 5230896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 40041777 - 40041844
Alignment:
Q  91 agcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||| |||| ||||||||||||||||| ||||||||| |||| |||||| ||||||||    
T  40041777 agcgtctatttcttgaataaatgttttattcgcgtgttttatcactttaatataaatagggcgttaca 40041844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 14182567 - 14182674
Alignment:
Q  54 tttatatatgcatgttg--ttgatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagag 151  Q
    |||||||||||||||||  |||||  || ||||| | |||||||||||||||| |||||   | |||||||||||| ||||| ||| ||||||||||| |    
T  14182567 tttatatatgcatgttgatttgatttttgttgaagacgtagcgtctatttcttgaatattcatattattcgcgtgttttatcgctttaatagaaataggg 14182666  T
Q  152 cgttacac 159  Q
    ||||||||    
T  14182667 cgttacac 14182674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 55513904 - 55513971
Alignment:
Q  81 ttgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaata 148  Q
    ||||| |||||||||||||||||| ||||| || ||||||||||||| ||||| ||| ||||||||||    
T  55513904 ttgaagatgtagcgtctatttcttgaatatctgctttattcgcgtgttttatcgctttaatagaaata 55513971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 12019883 - 12019813
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||||||||||||| ||| |||||||||||| |||   ||| ||||||||||| |||||||||    
T  12019883 gtagcgtctatttcttaaatatctgtattattcgcgtgttttactgctttaatagaaatagggcgttacac 12019813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 11517658 - 11517735
Alignment:
Q  82 tgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||| ||||| |||||||||||| ||||| | | |||||||||||||||||| ||| ||||||||||  |||||||||    
T  11517658 tgaagatgtatcgtctatttcttgaatatttatattattcgcgtgtattatcgctttaatagaaatatggcgttacac 11517735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 17202600 - 17202531
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgtta 156  Q
    |||||||||||||||||| ||||||||| ||||| |||| | ||| | ||||||||||||||| ||||||    
T  17202600 atgtagcgtctatttcttgaatatatgtattatttgcgtcttttaccgcttaaatagaaatagggcgtta 17202531  T

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Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 14889839 - 14889783
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatag 149  Q
    |||||||||||| |||| ||| ||||||||||||||||||| ||| |||||||||||    
T  14889839 cgtctatttcttgaataaatgctttattcgcgtgtattatcgctttaatagaaatag 14889783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 17391000 - 17390892
Alignment:
Q  54 tttatatatgcatgttgtt-gatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcg---cgtgtattatcacttaaatagaaatag 149  Q
    ||||||||||||||||||| || | || ||||| | |||||||||||||||| ||||| | | |||||||   ||||||||||| ||| ||||||||||     
T  17391000 tttatatatgcatgttgtttgaaatttgttgaagacgtagcgtctatttcttgaatatttatattattcgtcgcgtgtattatcgctttaatagaaataa 17390901  T
Q  150 agcgttaca 158  Q
     ||||||||    
T  17390900 ggcgttaca 17390892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 6230877 - 6230942
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||| ||||| ||| |||||||| ||| ||||| ||| ||||||||||| ||||||||    
T  6230877 cgtctatttcttgaatatttgtattattcgcatgttttatcgctttaatagaaatagggcgttaca 6230942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 8687865 - 8687760
Alignment:
Q  54 tttatatatgcatgttgttgatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcg 153  Q
    ||||||||| ||| ||| || || || ||||| | ||| |||||||||||| |||||||| ||||||||  ||| ||||| ||| ||||||| ||| |||    
T  8687865 tttatatatccatattgatgttatttgttgaagacgtaacgtctatttcttgaatatatgctttattcgtatgttttatcgctttaatagaagtagggcg 8687766  T
Q  154 ttacac 159  Q
    ||||||    
T  8687765 ttacac 8687760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 9039734 - 9039629
Alignment:
Q  54 tttatatatgcatgttgttgatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcg 153  Q
    ||||||||| ||| ||| || || || ||||| | ||| |||||||||||| |||||||| ||||||||  ||| ||||| ||| ||||||| ||| |||    
T  9039734 tttatatatccatattgatgttatttgttgaagacgtaacgtctatttcttgaatatatgctttattcgtatgttttatcgctttaatagaagtagggcg 9039635  T
Q  154 ttacac 159  Q
    ||||||    
T  9039634 ttacac 9039629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 15548467 - 15548398
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||||||  |||||||||||| ||||| | | ||||||||||  ||||||||    
T  15548467 gtagcgtctatttcttgaatatatgccttattcgcgtgttttatcgcattaatagaaataaggcgttaca 15548398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 15874153 - 15874084
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| |||||||| |||||||||| || ||||| ||| |||| |||||| | ||||||    
T  15874153 gtagcgtctatttcttgaatatatgctttattcgcgagttttatcgctttaataaaaatagggtgttaca 15874084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 21168923 - 21168988
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||| ||||  | | |||||||||||||||| | ||| ||||||||||||||||||||    
T  21168923 cgtctatttcttgaataattatattattcgcgtgtattaccgctttaatagaaatagagcgttaca 21168988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 34557824 - 34557759
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||| ||||||||| |||||||||||| |||||  || |||||||||||  |||||||    
T  34557824 cgtctatttcttgaatatatgtattattcgcgtgttttatcgttttaatagaaataggacgttaca 34557759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 11884446 - 11884509
Alignment:
Q  95 tctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||| ||||||| | ||||| |||||| ||||| ||| ||||||||||| ||||||||    
T  11884446 tctatttcttgaatatatttattatttgcgtgttttatcgctttaatagaaatagggcgttaca 11884509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 23888374 - 23888441
Alignment:
Q  91 agcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||||||||||  |||||||| ||| | ||  ||| ||||||||||| ||||||||    
T  23888374 agcgtctatttcttaaatatatgaattattcgcatgtttaattgctttaatagaaatagggcgttaca 23888441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 38378381 - 38378452
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||| |||||||||||||||||| | | ||||||| |||| ||||| ||| ||||||||||| | ||||||    
T  38378381 atgtaacgtctatttcttaaatatttatattattcgtgtgttttatcgctttaatagaaatagggtgttaca 38378452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 43429756 - 43429822
Alignment:
Q  92 gcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    ||||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||| |||||||||    
T  43429756 gcgtctatttcttgaatat-tatattattcgcgtgttttatcgctttaatagaaatagggcgttacac 43429822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 325323 - 325393
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||| ||||||||||| |||||||| ||||||||||  | ||||| |||  |||||||||| |||||||||    
T  325323 gtagtgtctatttcttgaatatatgctttattcgcgaattttatcgctttgatagaaatagggcgttacac 325393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 13330808 - 13330742
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    ||||||||| || ||||||| | |||||||||||| ||||| ||| ||||||| ||| |||||||||    
T  13330808 cgtctattttttgaatatatttattattcgcgtgttttatcgctttaatagaagtagggcgttacac 13330742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 14286965 - 14286895
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||||||| |||| |||| |||||||| ||| ||||  ||| ||||||||||| | |||||||    
T  14286965 gtagcgtctatttcttgaataaatgtattattcgcatgttttattgctttaatagaaatagggtgttacac 14286895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 31416433 - 31416499
Alignment:
Q  92 gcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||||||||| ||||| | | |||||||||||| ||||| ||| |||||||| || ||||||||    
T  31416433 gcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaacagggcgttaca 31416499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 41659569 - 41659507
Alignment:
Q  94 gtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgtta 156  Q
    ||||||||||| ||||| | | |||||| ||||| ||||||||| ||||||||||| ||||||    
T  41659569 gtctatttcttgaatatttatattattctcgtgttttatcactttaatagaaatagggcgtta 41659507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 11988401 - 11988470
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||||||  |||||||| ||| | ||  ||| ||||||||||| ||||||||    
T  11988401 gtagcgtctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggcgttaca 11988470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 12950528 - 12950459
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||| | | |||||||||||| |||||  || ||||||||||| | ||||||    
T  12950528 gtagcgtctatttcttgaatatttatattattcgcgtgttttatcgttttaatagaaatagggtgttaca 12950459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 37919094 - 37919163
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||| | ||||||| |||| ||| |||||||| |||| ||||| ||| ||||||||||| ||||||||    
T  37919094 gtagcgacgatttcttgaataaatgatttattcgtgtgttttatcgctttaatagaaatagggcgttaca 37919163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 4164463 - 4164519
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatag 149  Q
    |||||||||||| ||||| | | |||||||||||| ||||| ||| |||||||||||    
T  4164463 cgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatag 4164519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 14820045 - 14820109
Alignment:
Q  95 tctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||| ||||| | | |||||||||||| ||||| ||| |||| ||| ||||||||||||    
T  14820045 tctatttcttgaatatttatattattcgcgtgttttatcgctttaataaaaaaagagcgttacac 14820109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 17320789 - 17320865
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    |||| ||||||||||| | ||||| | | |||||||||||| ||||  ||| ||||||||||| |||||||| ||||    
T  17320789 atgtggcgtctatttcctgaatatttatattattcgcgtgttttattgctttaatagaaatagggcgttacaagttg 17320865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 24902105 - 24902153
Alignment:
Q  97 tatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaa 145  Q
    |||||||||||||| ||| |||||||||||| ||||| ||| |||||||    
T  24902105 tatttcttaaatatttgtattattcgcgtgttttatcgctttaatagaa 24902153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 3194198 - 3194303
Alignment:
Q  54 tttatatatgcatgttgtt-gatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagc 152  Q
    |||||| |||||||||||| |||| || ||||||| ||||||||||||| || ||||| ||| |||||||||||| ||||| ||| ||||||||||| ||    
T  3194198 tttataaatgcatgttgtttgatatttgttgaaaacgtagcgtctattttttgaatatttgtattattcgcgtgttttatcgctttaatagaaatagggc 3194297  T
Q  153 gttaca 158  Q
    ||||||    
T  3194298 gttaca 3194303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 14279117 - 14279186
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||||||| |||||||||||  |||||||    
T  14279117 gtagcgtctatttcttgaatatatgtattattcgcgtgttttatcactttaatagaaataggacgttaca 14279186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 15980726 - 15980795
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||| ||| ||||||||||| ||||||||    
T  15980726 gtagcgtctatttcttgaataaatgctttattcgcgtgtattatcgctttaatagaaatagggcgttaca 15980795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 13387949 - 13387890
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaata 148  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| || ||||||||||    
T  13387949 gtagcgtctatttcttaaataaatgttttattcgcgtgttttatcaatttaatagaaata 13387890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 9058834 - 9058903
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||||||||||| | |||||||||||| | ||| ||| ||||||||||| ||||||||    
T  9058834 gtagcgtctatttcttaaatatatatattattcgcgtgtttgatcgctttaatagaaatagggcgttaca 9058903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 12245687 - 12245586
Alignment:
Q  54 tttatatatgcatgttgtt-gatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagc 152  Q
    ||||||||||||||||||| |||| || ||||| | ||| ||||||||| || |||| ||||||||||||||||| ||||  ||| ||||||||||| ||    
T  12245687 tttatatatgcatgttgtttgatatttgttgaagacgtaacgtctatttattgaataaatgttttattcgcgtgttttattgctttaatagaaatagggc 12245588  T
Q  153 gt 154  Q
    ||    
T  12245587 gt 12245586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 5617417 - 5617345
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||||||||| ||||||||| ||||| |||||| ||| | ||| ||||||||||| |||||||||    
T  5617417 atgtagcgtctatttcttgaatatatgtattattagcgtgttttaccgctttaatagaaatagggcgttacac 5617345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 17948238 - 17948309
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||| ||||||||    
T  17948238 atgtagcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagtgcgttaca 17948309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 16915608 - 16915539
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||||||| |||||||| ||| ||| | ||| ||||||||||| ||||||||    
T  16915608 gtagcgtctatttcttgaatatatgtattattcgcatgttttaccgctttaatagaaatagggcgttaca 16915539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 34243354 - 34243423
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||||||||||||  |||||||| |||||||||||| ||||| ||| ||||||||||| | ||||||    
T  34243354 gtagcgtctatttcttgcatatatgtattattcgcgtgttttatcgctttaatagaaatagggtgttaca 34243423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 48345547 - 48345478
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||||||| ||||| | |||| ||||| ||| ||||||||||| ||||||||    
T  48345547 gtagcgtctatttcttgaatatatgtattatttgtgtgttttatcgctttaatagaaatagggcgttaca 48345478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 9609205 - 9609133
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||| ||||||||||||| |||||||| |||||||| |||| ||||| ||| |||||||||||  ||||||||    
T  9609205 atgtcgcgtctatttcttgaatatatgctttattcgtgtgttttatcgctttaatagaaataggtcgttacac 9609133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 9836777 - 9836705
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||| ||||||||||||| |||||||| |||||||| |||| ||||| ||| |||||||||||  ||||||||    
T  9836777 atgtcgcgtctatttcttgaatatatgctttattcgtgtgttttatcgctttaatagaaataggtcgttacac 9836705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 39294330 - 39294437
Alignment:
Q  54 tttatatatgcatgttg--ttgatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagag 151  Q
    |||||||||||||||||  |||||  |||||| | | |||||||||||||||| ||||| | | ||||||| |||| ||||| ||| | ||||||||| |    
T  39294330 tttatatatgcatgttgatttgatttttattgtagacgtagcgtctatttcttgaatatttatattattcgtgtgttttatcgctttattagaaataggg 39294429  T
Q  152 cgttacac 159  Q
    ||||||||    
T  39294430 cgttacac 39294437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 14938660 - 14938593
Alignment:
Q  96 ctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    ||||||||||||||| | | |||||||||||| ||||| ||| ||||||||||| |||||||| ||||    
T  14938660 ctatttcttaaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttacaagttg 14938593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 15366253 - 15366186
Alignment:
Q  96 ctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    ||||||||||||||| | | |||||||||||| ||||| ||| ||||||||||| |||||||| ||||    
T  15366253 ctatttcttaaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttacaagttg 15366186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 19065218 - 19065155
Alignment:
Q  95 tctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||| |||| ||||||||||||||||| ||||| ||| |||||||||||  |||||||    
T  19065218 tctatttcttgaataaatgttttattcgcgtgttttatcgctttaatagaaatagtacgttaca 19065155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 4444245 - 4444171
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    |||||||||||||||| ||||| | | |||||||||||| | ||| ||| ||||||||||| |||||||| ||||    
T  4444245 gtagcgtctatttcttgaatatttatattattcgcgtgtttaatctctttaatagaaatagggcgttacaagttg 4444171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 21677713 - 21677779
Alignment:
Q  92 gcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||| ||||||||    
T  21677713 gcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 21677779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 14303063 - 14303128
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||| ||||| ||| |||||||||||| ||||| ||| ||||||| ||| ||||||||    
T  14303063 cgtctatttcttgaatatttgtattattcgcgtgttttatcgctttaatagaagtagggcgttaca 14303128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 17230322 - 17230391
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| |||||||| ||||||||| ||| ||| | ||| ||||||||||  ||||||||    
T  17230322 gtagcgtctatttcttgaatatatgctttattcgcatgttttaccgctttaatagaaatatggcgttaca 17230391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 16930177 - 16930237
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatag 149  Q
    |||||||||||||||| |||||||| ||||||| || || ||||| ||| |||||||||||    
T  16930177 gtagcgtctatttcttgaatatatgctttattcacgagttttatcgctttaatagaaatag 16930237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 16935560 - 16935620
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatag 149  Q
    |||||||||||||||| |||||||| ||||||| || || ||||| ||| |||||||||||    
T  16935560 gtagcgtctatttcttgaatatatgctttattcacgagttttatcgctttaatagaaatag 16935620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 15953822 - 15953881
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaata 148  Q
    |||||||||||||||| |||||||| |||||||| | || ||||| ||| ||||||||||    
T  15953822 gtagcgtctatttcttgaatatatgctttattcgtgagttttatcgctttaatagaaata 15953881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 16381866 - 16381803
Alignment:
Q  95 tctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| | | |||||||||||| ||||| ||| ||||||||||| | ||||||    
T  16381866 tctatttcttaaatatttatattattcgcgtgttttatcgctttaatagaaatagggtgttaca 16381803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 17926793 - 17926734
Alignment:
Q  99 tttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||| |||| ||| ||||||||||||| ||||| ||| ||||||||||| ||||||||    
T  17926793 tttcttgaataaatgctttattcgcgtgttttatcgctttaatagaaatagggcgttaca 17926734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 19380917 - 19380851
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||| ||||| ||| |||||||| ||| ||||| ||| ||||||| ||| |||||||||    
T  19380917 cgtctatttcttgaatatttgtattattcgcatgttttatcgctttaatagaagtagggcgttacac 19380851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 15305400 - 15305335
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||| | ||||| || ||||||||||||| ||||| ||| ||||||| ||| ||||||||    
T  15305400 cgtctatttcatgaatatttgatttattcgcgtgttttatcgctttaatagaagtagggcgttaca 15305335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 15762806 - 15762879
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgtt 162  Q
    |||||||||||||||| ||||||||  |||||||| ||| | ||  ||| ||||||| ||| ||||||||||||    
T  15762806 gtagcgtctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaagtagggcgttacacgtt 15762879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 16651431 - 16651500
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||| ||||||||||| |||| || |||||||||||||| |||||| || |||| |||||| | ||||||    
T  16651431 gtagggtctatttcttgaataaatattttattcgcgtgttttatcattttaatataaatagggtgttaca 16651500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 17625791 - 17625860
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||| ||||||||||| |||| || |||||||||||||| |||||| || |||| |||||| | ||||||    
T  17625791 gtagggtctatttcttgaataaatattttattcgcgtgttttatcattttaatataaatagggtgttaca 17625860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 18366234 - 18366299
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||| ||||| ||| |||||||||||| ||||| |||  |||||| ||| ||||||||    
T  18366234 cgtctatttcttgaatatttgtattattcgcgtgttttatcgctttgatagaagtagggcgttaca 18366299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 31499200 - 31499135
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||| ||| ||||||||    
T  31499200 cgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaagtagggcgttaca 31499135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 12182194 - 12182130
Alignment:
Q  94 gtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||||||| ||||| ||| ||||||| |||| ||||| ||| |||||||||||  |||||||    
T  12182194 gtctatttcttgaatatttgtattattcgtgtgttttatcgctttaatagaaataggacgttaca 12182130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 54 - 163
Target Start/End: Original strand, 4919 - 5030
Alignment:
Q  54 tttatatatgcatgttgtt--gatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagag 151  Q
    |||||||||||||||||||  | |  || ||||| | |||||||||||||||| |||| ||||||||||||||||| ||||| ||| ||||||||||| |    
T  4919 tttatatatgcatgttgttttggtttttgttgaagacgtagcgtctatttcttgaataaatgttttattcgcgtgttttatcgctttaatagaaataggg 5018  T
Q  152 cgttacacgttg 163  Q
    ||||||| ||||    
T  5019 cgttacaagttg 5030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 21193120 - 21193050
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||| ||| ||||||||||| |||||||||    
T  21193120 gtagcgtctatttcttgaatatatgtattattcgcgtgttttatcgctttaatagaaatagggcgttacac 21193050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 17606885 - 17606816
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| |||||||| ||||||||||||| ||||| ||| ||||||||||| ||||||||    
T  17606885 gtagcgtctatttcttgaatatatgctttattcgcgtgttttatcgctttaatagaaatagggcgttaca 17606816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 27672746 - 27672677
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| |||| ||||||||||||||||| ||| | ||| ||||||||||| ||||||||    
T  27672746 gtagcgtctatttcttgaataaatgttttattcgcgtgttttaccgctttaatagaaatagggcgttaca 27672677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 20957241 - 20957317
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    |||| ||||||||||||| ||||||||| |||||||||||| | ||| ||| ||||||||||| |||||||| ||||    
T  20957241 atgtggcgtctatttcttgaatatatgtattattcgcgtgtttaatcgctttaatagaaatagggcgttacaagttg 20957317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 20191759 - 20191653
Alignment:
Q  54 tttatatatgcatgttg--ttgatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagag 151  Q
    |||||||||||||||||  ||| |  |||||| | | |||||||||||||||| |||| |||||||||||| |||| ||||| ||| ||||||||||  |    
T  20191759 tttatatatgcatgttgatttggtttttattgtagacgtagcgtctatttcttgaataaatgttttattcgtgtgttttatcgctttaatagaaataagg 20191660  T
Q  152 cgttaca 158  Q
    |||||||    
T  20191659 cgttaca 20191653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 25091033 - 25090964
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| |||| || |||||||||||||| ||||| ||| ||||||| ||| ||||||||    
T  25091033 gtagcgtctatttcttgaataaatattttattcgcgtgttttatcgctttaatagaagtagggcgttaca 25090964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 37236172 - 37236241
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||||||| |||||||||||| ||| | ||| |||||||| || ||||||||    
T  37236172 gtagcgtctatttcttgaatatatgtattattcgcgtgttttaccgctttaatagaaacagggcgttaca 37236241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 40555331 - 40555264
Alignment:
Q  92 gcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    ||||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||| |||||||||    
T  40555331 gcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttacac 40555264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 19601150 - 19601080
Alignment:
Q  91 agcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgt 161  Q
    |||||||||||||| ||||||||| |||||||||||| ||||  ||| ||||||||| | | |||||||||    
T  19601150 agcgtctatttcttgaatatatgtattattcgcgtgttttatagctttaatagaaatggggtgttacacgt 19601080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 22148615 - 22148683
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||||| | |||||||||||| ||||| ||| |||| |||||| ||||||||    
T  22148615 gtagcgtctatttcttgaatatatttattattcgcgtgttttatcgctt-aatataaatagggcgttaca 22148683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 50002167 - 50002229
Alignment:
Q  96 ctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||| ||||||||    
T  50002167 ctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 50002229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 78711 - 78776
Alignment:
Q  94 gtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    ||||||||||| ||||| | | |||||||||||| ||||| ||| || |||||||| |||||||||    
T  78711 gtctatttcttgaatatttatattattcgcgtgttttatcgctttaacagaaatagggcgttacac 78776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 16243694 - 16243629
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||| ||||| ||| ||||||||| || ||||||||| ||||||| ||| | ||||||    
T  16243694 cgtctatttcttgaatatttgtattattcgcgcgttttatcactttaatagaagtagggtgttaca 16243629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 17021511 - 17021446
Alignment:
Q  94 gtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    ||||||||||| ||||||||| |||||||||||| ||| |  || |||||||||||  ||||||||    
T  17021511 gtctatttcttgaatatatgtattattcgcgtgttttaccgttttaatagaaataggccgttacac 17021446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 20820423 - 20820354
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||||||||| ||||||| |||  |||||||  ||||||||  ||| |||| |||||||||||||||    
T  20820423 gtagcgtctattttttaaataaatgcattattcgtttgtattattgctttaataaaaatagagcgttaca 20820354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 21041751 - 21041682
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||||| |||||| ||||| | | |||||||||||| ||||| ||| ||||||| ||| ||||||||    
T  21041751 gtagcgtctgtttcttgaatatttatattattcgcgtgttttatcgctttaatagaagtagggcgttaca 21041682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 21223677 - 21223612
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||| ||||| ||  |||||| ||||| ||||| ||| ||||||| ||||||||||||    
T  21223677 cgtctatttcttgaatatttgaattattcacgtgttttatcgctttaatagaagtagagcgttaca 21223612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 7966816 - 7966885
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| |||||||| ||||||||||||| ||||| ||| ||||||||||||| ||||||    
T  7966816 gtagcgtctatttcttgaatatatgctttattcgcgtgttttatcgctttaatagaaatagagtgttaca 7966885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 54366263 - 54366332
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| |||||||| ||||||||||||| ||||  ||| ||||||||||||||||||||    
T  54366263 gtagcgtctatttcttgaatatatgctttattcgcgtgttttattgctttaatagaaatagagcgttaca 54366332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 12136461 - 12136567
Alignment:
Q  54 tttatatatgcatgttgtt--gatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagag 151  Q
    |||||||||||||||||||  |||  ||| |||| | ||||||||||||||||  ||| ||||||||||||||||| ||||| ||| ||||||||||  |    
T  12136461 tttatatatgcatgttgttttgatttttaatgaagacgtagcgtctatttcttggataaatgttttattcgcgtgttttatcgctttaatagaaatatgg 12136560  T
Q  152 cgttaca 158  Q
    |||||||    
T  12136561 cgttaca 12136567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 18274770 - 18274696
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    ||||| |||||||||| ||||||||| || ||||||||| ||||||||| ||||||||||| |||||||| ||||    
T  18274770 gtagcatctatttcttgaatatatgtattgttcgcgtgttttatcactttaatagaaatagggcgttacaagttg 18274696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 24236899 - 24236830
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||| ||| ||||||||||  ||||||||    
T  24236899 gtagcgtctatttcttgaataaatgttttattcgcgtgttttatcgctttaatagaaataaggcgttaca 24236830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 42706744 - 42706675
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||||| | |||||||||||| ||||| ||| ||||||||||| ||||||||    
T  42706744 gtagcgtctatttcttgaatatatttattattcgcgtgttttatcgctttaatagaaatagggcgttaca 42706675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 12729366 - 12729297
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||||||||| | | |||||||||||| ||||| ||| ||||||| ||| ||||||||    
T  12729366 gtagcgtctatttcttaaatatttatattattcgcgtgttttatcgctttaatagaagtagggcgttaca 12729297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 19624248 - 19624317
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||| | | ||||||| |||||||||| ||| ||||||||||| ||||||||    
T  19624248 gtagcgtctatttcttgaatatttatgttattcgtgtgtattatcgctttaatagaaatagggcgttaca 19624317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 14569400 - 14569296
Alignment:
Q  54 tttatatatgcatgttgttgatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcg 153  Q
    |||||||||||||||||||   | || ||||| | |||||||||||||||| ||||| | | ||||||| |||||||||| ||| ||||||| ||| | |    
T  14569400 tttatatatgcatgttgtttgaatttgttgaagacgtagcgtctatttcttgaatatttatattattcgtgtgtattatcgctttaatagaagtagggtg 14569301  T
Q  154 ttaca 158  Q
    |||||    
T  14569300 ttaca 14569296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 15216392 - 15216443
Alignment:
Q  107 atatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||| ||||||||    
T  15216392 atatatgttttattcgcgtgttttatcgctttaatagaaatagggcgttaca 15216443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 41258592 - 41258663
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||||| |||||||||  ||||||||||| |||||  || ||||||||||| || |||||    
T  41258592 atgtagcgtctatttcttgaatatatgtactattcgcgtgttttatcgttttaatagaaatagggcattaca 41258663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 12370654 - 12370720
Alignment:
Q  92 gcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||||||||  ||||| ||| |||||||||||| ||||| ||| ||||||||||| ||||||||    
T  12370654 gcgtctatttctggaatatttgtattattcgcgtgttttatcgctttaatagaaatagggcgttaca 12370720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 47470552 - 47470618
Alignment:
Q  92 gcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||||||||| ||||| | | |||||||||||| ||||||||| ||||||||||  ||||||||    
T  47470552 gcgtctatttcttgaatatttatattattcgcgtgttttatcactttaatagaaatatggcgttaca 47470618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 50224374 - 50224440
Alignment:
Q  92 gcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||| ||||||||    
T  50224374 gcgtctatttcttgaatatttttattattcgcgtgttttatcgctttaatagaaatagggcgttaca 50224440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 12246450 - 12246519
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| |||||||| |||||||||| || ||| | ||| ||||||||||| | ||||||    
T  12246450 gtagcgtctatttcttgaatatatgctttattcgcgagttttaccgctttaatagaaatagggtgttaca 12246519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 15853497 - 15853566
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||| |||||||||| |||||||  |||||||||| || ||||| ||| ||||||||||| ||||||||    
T  15853497 gtagcatctatttcttgaatatatactttattcgcgagttttatcgctttaatagaaatagggcgttaca 15853566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 17196236 - 17196305
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||| |||||||||| |||| || |||||||||||||||||||| ||| |||| |||||| | ||||||    
T  17196236 gtagcatctatttcttgaataaatattttattcgcgtgtattatcgctttaataaaaatagggtgttaca 17196305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 158
Target Start/End: Complemental strand, 5407142 - 5407062
Alignment:
Q  78 ttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||| | || ||||||||| ||| ||||| | | ||| |||||||| ||||||||| ||||||||||| ||||||||    
T  5407142 ttattgaagacgtggcgtctattacttgaatatttatattactcgcgtgttttatcactttaatagaaatagggcgttaca 5407062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 13815059 - 13815129
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    ||||| ||| |||||| |||| |||| |||||||||||||||| | ||| ||||||||||| | |||||||    
T  13815059 gtagcatctgtttcttgaataaatgtattattcgcgtgtattaccgctttaatagaaatagggtgttacac 13815129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 55379116 - 55379186
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    ||||| |||||||||| |||| |||| |||||||| ||| ||||  ||||||||||||||| | |||||||    
T  55379116 gtagcctctatttcttgaataaatgtattattcgcatgttttattgcttaaatagaaatagggtgttacac 55379186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 12338883 - 12338952
Alignment:
Q  94 gtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    ||||||||||||||||  ||| ||||| |||||| ||||| ||| ||||||| ||| |||||||| ||||    
T  12338883 gtctatttcttaaataattgtattattggcgtgttttatcgctttaatagaagtagggcgttacaagttg 12338952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 13449232 - 13449296
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||| ||||||||    
T  13449232 cgtctatttcttgaatat-tatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 13449296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 14503753 - 14503822
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||||||  |||||||| ||| | ||  ||| ||||||||||| ||||||||    
T  14503753 gtagcgtctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggcgttaca 14503822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 27959011 - 27958942
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| |||| |||| |||||||| ||| |||| |||| |||| |||||| | ||||||    
T  27959011 gtagcgtctatttcttgaataaatgtattattcgcatgttttattactttaataaaaatagggtgttaca 27958942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 12350870 - 12350922
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaa 145  Q
    |||||||||||| ||||  ||| |||||||||||| ||||||||| |||||||    
T  12350870 cgtctatttcttgaataattgtattattcgcgtgttttatcactttaatagaa 12350922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 41919462 - 41919522
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatag 149  Q
    ||||| |||||||||| ||||| | | |||||||||||| ||||| ||| |||||||||||    
T  41919462 gtagcatctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatag 41919522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 7052 - 6976
Alignment:
Q  82 tgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||| |||||||||||||||||| |||||||| ||||||||||||| ||||| ||| ||||||||||| | ||||||    
T  7052 tgaagatgtagcgtctatttcttgaatatatgctttattcgcgtgttttatcgctttaatagaaatagggtgttaca 6976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 29163093 - 29163200
Alignment:
Q  54 tttatatatgcatgttgtt--gatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagag 151  Q
    |||||||||||||||||||  |||  || ||||  |||||||||||||||||| ||||| | | |||||| ||||| ||||| ||| |||||||||||||    
T  29163093 tttatatatgcatgttgtttggatttttgttgatgatgtagcgtctatttcttgaatatttatgttattcacgtgttttatcgctttaatagaaatagag 29163192  T
Q  152 cgttacac 159  Q
    ||||||||    
T  29163193 cgttacac 29163200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 12311218 - 12311288
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||| ||| ||||||||||  |||||||||    
T  12311218 gtagcgtctatttcttgaatatatgtattattcgcgtgttttatcgctttaatagaaatatggcgttacac 12311288  T

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Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 6092488 - 6092418
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||||||| ||||||  | |||||||||||| ||||| ||| ||||||||||| |||||||||    
T  6092488 gtagcgtctatttcttgaatataattattattcgcgtgttttatcgctttaatagaaatagggcgttacac 6092418  T

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Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 16131253 - 16131147
Alignment:
Q  54 tttatatatgcatgttgtt-gatagttat-tgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagag 151  Q
    ||||||||||||||||||| |||  | || |||| | |||||||||||||||| |||| ||| ||||||||||||| ||||| ||| ||||||||||| |    
T  16131253 tttatatatgcatgttgtttgattttgatgtgaagacgtagcgtctatttcttgaataaatgctttattcgcgtgttttatccctttaatagaaataggg 16131154  T
Q  152 cgttaca 158  Q
     ||||||    
T  16131153 tgttaca 16131147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 21621082 - 21621016
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||||||||||||||||||||||| || |||||  || ||||||||||| ||| |||||    
T  21621082 cgtctatttcttaaatatatgttttattcgcgagttttatcgttttaatagaaatagggcgatacac 21621016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 25917648 - 25917578
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||| ||||| ||||||| | |||||||||||| ||||||||| ||||||| ||| |||||||||    
T  25917648 gtagcgtctaattcttgaatatatttattattcgcgtgttttatcactttaatagaattagggcgttacac 25917578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 17085767 - 17085832
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||| ||||||| | |||||||||||| ||||| ||| ||||||||||| ||||||||    
T  17085767 cgtctatttcttgaatatatttattattcgcgtgttttatcgctttaatagaaatagggcgttaca 17085832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 22364450 - 22364523
Alignment:
Q  90 tagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    ||||||||||||||| ||||||||  |||||||||||| ||| | ||| ||||||||||| |||||||| ||||    
T  22364450 tagcgtctatttcttgaatatatgcattattcgcgtgttttaccgctttaatagaaatagggcgttacaagttg 22364523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 14150537 - 14150463
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    |||||||||||||||| ||||||| | ||||||| |||  ||||| ||| ||||||||||| |||||||| ||||    
T  14150537 gtagcgtctatttcttgaatatatttattattcgtgtgctttatcgctttaatagaaatagggcgttacaagttg 14150463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 15006844 - 15006918
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    |||||||||||||||| ||||| | | |||||| ||||| ||||| ||| ||||||||||| |||||||| ||||    
T  15006844 gtagcgtctatttcttgaatatttatattattcccgtgttttatcgctttaatagaaatagggcgttacaagttg 15006918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 21927454 - 21927524
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtg-tattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| |||||||| |||||||||| | | ||||| ||| ||||||||||| ||||||||    
T  21927454 gtagcgtctatttcttgaatatatgctttattcgcgagtttttatcgctttaatagaaatagggcgttaca 21927524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 21929401 - 21929327
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    |||| |||||||||| ||||| ||| ||||||||||||| ||||| ||| ||||||||||| | |||||| ||||    
T  21929401 gtagggtctatttctcaaataaatgctttattcgcgtgttttatcgctttaatagaaatagggtgttacaagttg 21929327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 25782577 - 25782643
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||| ||||| ||| |||||| ||||| ||||||||| ||||||| ||| |||||||||    
T  25782577 cgtctatttcttgaatatttgtattattcacgtgttttatcactttaatagaagtagggcgttacac 25782643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 17858546 - 17858651
Alignment:
Q  54 tttatatatgcatgttgtt-gatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagc 152  Q
    |||||| |||||||||||| |||| || ||| | | ||||| | |||||||| ||||| ||| |||||||||||| ||||  ||| ||||||||||| ||    
T  17858546 tttataaatgcatgttgtttgatatttgttgcagacgtagcatgtatttcttgaatatttgtattattcgcgtgttttattgctttaatagaaatagggc 17858645  T
Q  153 gttaca 158  Q
    ||||||    
T  17858646 gttaca 17858651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 22595875 - 22595944
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||| ||| ||||||||    
T  22595875 gtagcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaagtagggcgttaca 22595944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 17791374 - 17791445
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||| |||||||||||| ||||||||  |||||||| ||| ||||| ||| ||||||||||| || |||||    
T  17791374 atgtaacgtctatttcttgaatatatgccttattcgcttgttttatcgctttaatagaaatagggcattaca 17791445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 19670491 - 19670425
Alignment:
Q  92 gcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    ||||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||| |||||||||    
T  19670491 gcgtctatttcttgaatat-tatattattcgcgtgttttatcgctttaatagaaatagggcgttacac 19670425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 17375926 - 17375996
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    ||||||||||||||||||||||   | ||||||| |||| ||||| ||| ||||||||||  |||||||||    
T  17375926 gtagcgtctatttcttaaatattaatattattcgtgtgttttatcgctttaatagaaatatggcgttacac 17375996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 155
Target Start/End: Complemental strand, 18017755 - 18017713
Alignment:
Q  113 gttttattcgcgtgtattatcacttaaatagaaatagagcgtt 155  Q
    ||||||||||||||| ||||||||| ||||||||||| |||||    
T  18017755 gttttattcgcgtgttttatcactttaatagaaatagggcgtt 18017713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 22846082 - 22846012
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    ||||||| |||||||| ||||| | | ||||||||| || ||||| ||| ||||||||||| |||||||||    
T  22846082 gtagcgtttatttcttgaatatttatattattcgcgggttttatcgctttaatagaaatagggcgttacac 22846012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 25649210 - 25649144
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||| ||||| | | |||||||||| | ||||||||| |||| |||||| |||||||||    
T  25649210 cgtctatttcttgaatatttatattattcgcgtattttatcactttaatataaatagggcgttacac 25649144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 29531750 - 29531820
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||||||| ||||||||  |||||||| ||| ||||  ||| ||||||||||| | |||||||    
T  29531750 gtagcgtctatttcttgaatatatgaattattcgcatgttttattgctttaatagaaatagggtgttacac 29531820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 34964888 - 34964822
Alignment:
Q  92 gcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||| || ||||| | | |||||||||||| ||||| ||| ||||||||||| ||||||||    
T  34964888 gcgtctattttttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 34964822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 1553569 - 1553496
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgtt 162  Q
    |||||||||||||||| ||||||||  |||||||| ||| | ||  ||| ||||||| ||| ||||||||||||    
T  1553569 gtagcgtctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaagtagggcgttacacgtt 1553496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 16373942 - 16373877
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||| ||||| ||||| ||| |||||||||||| ||||| ||| ||||||||||  ||||||||    
T  16373942 cgtctaattcttgaatatttgtattattcgcgtgttttatcgctttaatagaaataaggcgttaca 16373877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 16828366 - 16828439
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaata-gagcgttacacgt 161  Q
    ||||| |||||||||| |||| |||| |||||||| ||| | ||  |||||||||||||| |||||||||||||    
T  16828366 gtagcctctatttcttgaataaatgtattattcgcatgtttaattgcttaaatagaaataggagcgttacacgt 16828439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 7355 - 7426
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacg 160  Q
    |||||||||||||||| ||||||||| |||||||||||| |||||  || ||||||||||| ||||||||||    
T  7355 gtagcgtctatttcttgaatatatgtattattcgcgtgttttatcgatttaatagaaatagggcgttacacg 7426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 5342 - 5236
Alignment:
Q  54 tttatatatgcatgttg-ttgatagttattgaaaatg-tagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagag 151  Q
    ||||||||||||||||| |||| | || ||||| | | ||||||||||||||| |||||||| |||||||||||||||| ||  || ||||||||||| |    
T  5342 tttatatatgcatgttggttgaaatttgttgaagacggtagcgtctatttcttgaatatatgctttattcgcgtgtattttcgttttaatagaaataggg 5243  T
Q  152 cgttaca 158  Q
    |||||||    
T  5242 cgttaca 5236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 24643 - 24717
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    |||||||||||||||| ||||||||| ||||||||||||   ||| ||| |||||||||||||||||||| ||||    
T  24643 gtagcgtctatttcttgaatatatgtattattcgcgtgttaaatcgctttaatagaaatagagcgttacaagttg 24717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 29063 - 28993
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||||||| ||||||||| |||||||||||| ||| | ||| ||||||||||| |||||||||    
T  29063 gtagcgtctatttcttgaatatatgtgttattcgcgtgttttacccctttaatagaaatagggcgttacac 28993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 159
Target Start/End: Complemental strand, 25593205 - 25593127
Alignment:
Q  81 ttgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    ||||| ||||||| |||||||||| |||| ||||||||||||||||| ||||| ||| ||||||||||| | |||||||    
T  25593205 ttgaagatgtagcatctatttcttgaataaatgttttattcgcgtgttttatcgctttaatagaaatagggtgttacac 25593127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 25303545 - 25303476
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| |||||||| |||||||||| || ||||| ||| ||||||||||| ||||||||    
T  25303545 gtagcgtctatttcttgaatatatgctttattcgcgagttttatcgctttaatagaaatagggcgttaca 25303476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 19436132 - 19436203
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||| |||||||||| ||||||||| |||||||||||| ||||| ||| ||||||||||| | ||||||    
T  19436132 atgtagcttctatttcttgaatatatgtattattcgcgtgttttatcgctttaatagaaatagggtgttaca 19436203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 5480 - 5549
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| |||| |||| |||||||||||| ||| |  |||||||||||||| ||||||||    
T  5480 gtagcgtctatttcttgaataaatgtcttattcgcgtgttttaccgtttaaatagaaatagggcgttaca 5549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 22138025 - 22138084
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaata 148  Q
    |||||||||||||||| ||||||||| |||||||||||| | ||| ||| ||||||||||    
T  22138025 gtagcgtctatttcttgaatatatgtattattcgcgtgtttaatcgctttaatagaaata 22138084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 156
Target Start/End: Complemental strand, 19643865 - 19643763
Alignment:
Q  55 ttatatatgcatgttgtt-gatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcg 153  Q
    ||||| |||||||||||| ||||||| ||||| | ||| | ||||||| || ||||| ||  |||||||||||| ||||| ||| ||||||||||| |||    
T  19643865 ttataaatgcatgttgtttgatagttgttgaagacgtatcatctatttattgaatatttggattattcgcgtgttttatcgctttaatagaaatagggcg 19643766  T
Q  154 tta 156  Q
    |||    
T  19643765 tta 19643763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 24381726 - 24381660
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||| ||||| ||| |||||||||||| ||||| ||| ||||||| ||| |||||||||    
T  24381726 cgtctatttcttgaatatttgtattattcgcgtgttttatcgctttaatagaagtagggcgttacac 24381660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 32738425 - 32738355
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||||||| |||| |||  |||||||||||| ||| | ||| ||||||||||| |||||||||    
T  32738425 gtagcgtctatttcttgaataaatgccttattcgcgtgttttaccgctttaatagaaatagggcgttacac 32738355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 6092412 - 6092343
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||| | | |||||||||||| ||||| ||| |||| |||||| ||||||||    
T  6092412 gtagcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaataaaaatagggcgttaca 6092343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 45620658 - 45620723
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||| |||| ||| ||||||||| ||| ||||| ||| ||||||||||| ||||||||    
T  45620658 cgtctatttcttgaataaatgctttattcgcatgttttatcgctttaatagaaatagggcgttaca 45620723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 22582214 - 22582290
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttgtt 165  Q
    ||||| |||||||||| |||| | || |||||||| ||| |||| |||| ||||||||||||| |||||||| ||||    
T  22582214 gtagcatctatttcttgaataaaagtattattcgcatgttttattactttaatagaaatagagtgttacacgatgtt 22582290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 158
Target Start/End: Complemental strand, 34875999 - 34875919
Alignment:
Q  78 ttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||| ||  |||||||||||| ||||| ||| |||||||| ||| ||||| ||| ||||||| ||| ||||||||    
T  34875999 ttattgaaaacgtgacgtctatttcttgaatatttgtattattcgcatgttttatcgctttaatagaagtagggcgttaca 34875919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 19648046 - 19647975
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||||| |||||   | |||||||| ||| ||||| ||| ||||||||||| ||||||||    
T  19648046 atgtagcgtctatttcttgaatattattattattcgcttgttttatcgctttaatagaaatagggcgttaca 19647975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 24272004 - 24271938
Alignment:
Q  92 gcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||||||||| ||||| |   |||||||||||| ||||| ||| ||||||||||| ||||||||    
T  24272004 gcgtctatttcttgaatatttacattattcgcgtgttttatcgctttaatagaaatagggcgttaca 24271938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 9783080 - 9783149
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||||||||||||  |||||||  |||||||||||| ||||| ||| |||| |||||| | ||||||    
T  9783080 gtagcgtctatttcttgtatatatgcattattcgcgtgttttatcgctttaatataaatagggtgttaca 9783149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 19655473 - 19655404
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||||| | |||||||||||| | ||| ||| ||| ||||||  ||||||||    
T  19655473 gtagcgtctatttcttgaatatatttattattcgcgtgtttaatcgctttaattgaaataaggcgttaca 19655404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 24839384 - 24839315
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||| | | | |||| ||||||||| ||||||| |||||| |||| ||||||||    
T  24839384 gtagcgtctatttcttgaatttttatattatccgcgtgtataatcactttaatagagatagggcgttaca 24839315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 20270884 - 20270820
Alignment:
Q  95 tctatttcttaaatatatgttttattcgcgtg-tattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||| |||| |||||||||||||||| | ||||| ||| ||||||||||| | ||||||    
T  20270884 tctatttcttgaataaatgttttattcgcgtgtttttatcgctttaatagaaatagggtgttaca 20270820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 3033 - 3106
Alignment:
Q  90 tagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    ||||||||||||||| ||||||||| |||||| ||||| ||||| ||| ||||||||||| |||||||| ||||    
T  3033 tagcgtctatttcttgaatatatgtattattcacgtgttttatcgctttaatagaaatagggcgttacaagttg 3106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 11288 - 11361
Alignment:
Q  90 tagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    ||||||||||||||| ||||||||| |||||| ||||| ||||| ||| ||||||||||| |||||||| ||||    
T  11288 tagcgtctatttcttgaatatatgtattattcacgtgttttatcgctttaatagaaatagggcgttacaagttg 11361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 34352 - 34433
Alignment:
Q  82 tgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    |||| |||||| ||||||||||| ||||| | | |||||||||||||||||| ||| ||||||||||| |||||||| ||||    
T  34352 tgaagatgtagggtctatttcttgaatatttatattattcgcgtgtattatcgctttaatagaaatagggcgttacaagttg 34433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 99405 - 99474
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||| ||| |||||||||||  |||||||    
T  99405 gtagcgtctatttcttgaatatatgtattattcgcgtgttttatcgctttaatagaaataggacgttaca 99474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 2446 - 2377
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| ||| |||||||||||  |||||||    
T  2446 gtagcatctatttcttgaataaatgttttattcgcgtgtattatcgctttaatagaaataggacgttaca 2377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 51271 - 51197
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    |||||||||||||||| |||||||| |||||||||  ||  |||| ||| |||||||||||  ||||||| ||||    
T  51271 gtagcgtctatttcttgaatatatgctttattcgcaagttatatcgctttaatagaaataggacgttacaagttg 51197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 77694 - 77622
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||||||||| ||||||| | |||||||||||| ||| ||||| ||||||||||  |||||||||    
T  77694 atgtagcgtctatttcttgaatatatttattattcgcgtgttttaccactttaatagaaataaggcgttacac 77622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 70514 - 70583
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| |||||   | |||||||||||| ||||| ||| |||||| |||| ||||||||    
T  70514 gtagcgtctatttcttgaatattattattattcgcgtgttttatcgctttaatagacatagggcgttaca 70583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1949 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1949
Description:

Target: scaffold1949; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 1162 - 1091
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||||| |||||||| ||||||||| |||||||||||| ||||| ||| ||| ||||||| ||||||||    
T  1162 atgtagcgtttatttcttgaatatatgtattattcgcgtgttttatcgctttaatggaaatagggcgttaca 1091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 16223 - 16164
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaata 148  Q
    |||||||||||||||| |||||||||||||||||||||| | ||| ||| ||||||||||    
T  16223 gtagcgtctatttcttgaatatatgttttattcgcgtgtttaatcgctttaatagaaata 16164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 3237 - 3180
Alignment:
Q  91 agcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaata 148  Q
    |||||||||||||| ||||||||| |||||||||||| | ||| ||| ||||||||||    
T  3237 agcgtctatttcttgaatatatgtattattcgcgtgtttaatcgctttaatagaaata 3180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 11398 - 11327
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||| ||||||||||||| |||||||| ||||||||||||| ||||| | | ||||||||||| ||||||||    
T  11398 atgtggcgtctatttcttgaatatatgctttattcgcgtgttttatcgccttaatagaaatagggcgttaca 11327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 49445 - 49390
Alignment:
Q  94 gtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatag 149  Q
    ||||||||||| |||||||| ||||||||||||||||||| ||| |||||||||||    
T  49445 gtctatttcttgaatatatgctttattcgcgtgtattatcgctttaatagaaatag 49390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 53976 - 53921
Alignment:
Q  94 gtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatag 149  Q
    ||||||||||| |||||||| ||||||||||||||||||| ||| |||||||||||    
T  53976 gtctatttcttgaatatatgctttattcgcgtgtattatcgctttaatagaaatag 53921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 35114 - 35181
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgtta 156  Q
    |||||||| ||||||| |||||||| |||||||  |||||||||| ||| ||||||||||||||||||    
T  35114 gtagcgtccatttcttgaatatatgctttattcatgtgtattatcgctttaatagaaatagagcgtta 35181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 23325 - 23383
Alignment:
Q  91 agcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatag 149  Q
    |||||||||||||| |||||||| ||||||||||||| ||||| ||| |||||||||||    
T  23325 agcgtctatttcttgaatatatgctttattcgcgtgttttatcgctttaatagaaatag 23383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 2332 - 2402
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    ||||||||||||||| |||||||||  |||||||||||| ||||| ||| ||||||||||| | |||||||    
T  2332 gtagcgtctatttctcaaatatatgccttattcgcgtgttttatcgctttaatagaaatagggtgttacac 2402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 73498 - 73557
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaata 148  Q
    ||||| |||||||||| |||| ||| ||||||||||||| ||||| ||| ||||||||||    
T  73498 gtagcatctatttcttgaataaatgctttattcgcgtgttttatcgctttaatagaaata 73557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 11765889 - 11765995
Alignment:
Q  54 tttatatatgcatgttgttgatagtta-ttgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagc 152  Q
    |||||||||||||||||||| |  ||  ||||| | ||| |||||||||||| |||| ||| |||||||| |||| ||||| ||| ||||||||||| ||    
T  11765889 tttatatatgcatgttgttggtgttttgttgaagacgtaacgtctatttcttgaataaatgatttattcgtgtgttttatcgctttaatagaaatagggc 11765988  T
Q  153 gttacac 159  Q
    |||||||    
T  11765989 gttacac 11765995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 33628768 - 33628834
Alignment:
Q  90 tagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgtta 156  Q
    ||||||||||||||| ||||||||||||||||  |||| ||||| ||| ||||||||||| ||||||    
T  33628768 tagcgtctatttcttgaatatatgttttattcatgtgttttatcgctttaatagaaatagggcgtta 33628834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 37985836 - 37985730
Alignment:
Q  54 tttatatatgcatgttgttgatagt-tattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagc 152  Q
    ||||||||||||||||||| | | | ||||||| | | |||||||||||||| ||||| ||| |||||| ||||| ||||| ||| ||||||||||| |     
T  37985836 tttatatatgcatgttgtttaaaatctattgaagacgcagcgtctatttcttgaatatttgtattattcacgtgtgttatcgctttaatagaaatagggg 37985737  T
Q  153 gttacac 159  Q
    |||||||    
T  37985736 gttacac 37985730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 11963215 - 11963146
Alignment:
Q  90 tagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    ||||||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||| |||||||||    
T  11963215 tagcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttacac 11963146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 13793095 - 13793026
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| |||||||| |||||||||| || ||||  ||| ||||||||||| ||||||||    
T  13793095 gtagcgtctatttcttgaatatatgctttattcgcgagttttatggctttaatagaaatagggcgttaca 13793026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 3421050 - 3421115
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||| ||||||||    
T  3421050 cgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 3421115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 5623636 - 5623701
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||| ||||  | | |||||||||||||||| | ||| ||||||||||||||||||||    
T  5623636 cgtctatttcttgaataattatattattcgcgtgtattaccgctttaatagaaatagagcgttaca 5623701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 14345883 - 14345952
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||| | | ||||||| |||| ||||| ||| ||||||||||| ||||||||    
T  14345883 gtagcgtctatttcttgaatatttatattattcgtgtgttttatctctttaatagaaatagggcgttaca 14345952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 329
Target Start/End: Complemental strand, 21321594 - 21321533
Alignment:
Q  268 gaaattattcatgaatctcgttttttatcctaacaacgtccaagtacgatttcccctttatc 329  Q
    |||||||| ||||||| |||||||| ||||| ||||| |||||||| || ||||||||||||    
T  21321594 gaaattatgcatgaatgtcgtttttgatcctcacaacatccaagtatgacttcccctttatc 21321533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 32968398 - 32968459
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaata 148  Q
    |||||||||||||||||| | ||||||| |||||||| ||| ||||| ||| ||||||||||    
T  32968398 atgtagcgtctatttcttgagtatatgtattattcgcatgttttatcgctttaatagaaata 32968459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 16837949 - 16838017
Alignment:
Q  90 tagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||  ||||||||    
T  16837949 tagcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaataaggcgttaca 16838017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 22879853 - 22879786
Alignment:
Q  92 gcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    ||||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||| | |||||||    
T  22879853 gcgtctatttcttgaatatttatgttattcgcgtgttttatcgctttaatagaaatagggtgttacac 22879786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 24228155 - 24228214
Alignment:
Q  90 tagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatag 149  Q
    ||||||||||||||| ||||||||| |||||||| ||| ||||| ||| || ||||||||    
T  24228155 tagcgtctatttcttgaatatatgtattattcgcatgttttatcgctttaagagaaatag 24228214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 23236627 - 23236693
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||| ||||| | | ||||| |||||| ||||| ||| ||||||||||| |||||||||    
T  23236627 cgtctatttcttgaatatttatattatttgcgtgttttatcgctttaatagaaatagggcgttacac 23236693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 6454659 - 6454594
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||| ||| ||||||||    
T  6454659 cgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaagtagggcgttaca 6454594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 10780670 - 10780739
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||| |||||||||| |||| |||| |||||||| ||| | ||  ||| ||||||||||||||||||||    
T  10780670 gtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaaatagagcgttaca 10780739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 19871873 - 19871804
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||| | | ||||| || ||| ||||| ||| ||||||||||| ||||||||    
T  19871873 gtagcgtctatttcttgaatatttatattatttgcttgttttatcgctttaatagaaatagggcgttaca 19871804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 20318985 - 20319054
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| |||||||| ||||||||  ||| ||||| ||| |||| |||||| | ||||||    
T  20318985 gtagcgtctatttcttgaatatatgctttattcgtatgttttatctctttaatataaatagggtgttaca 20319054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1068 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 1279 - 1210
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||| ||||||||    
T  1279 gtagcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 1210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 12869 - 12938
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||||||| |||||||||||  ||||| ||| |||||||||||  |||||||    
T  12869 gtagcgtctatttcttgaatatatgtattattcgcgtgatttatcgctttaatagaaataggacgttaca 12938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 25828 - 25897
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||||||| ||||||| |||| ||||||||| | ||||||||| || |||||    
T  25828 gtagcgtctatttcttgaatatatgtattattcgtgtgttttatcactttattagaaatagggcattaca 25897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 10244 - 10175
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    ||||| |||||||||| |||||||| ||||||||||||| ||||| ||| ||||||||||  ||||||||    
T  10244 gtagcatctatttcttgaatatatgctttattcgcgtgttttatcgctttaatagaaatatggcgttaca 10175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 33436 - 33367
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||| ||||||||||| |||||||||||| |||||| || ||||| ||| ||||||||||| ||||||||    
T  33436 gtagtgtctatttcttgaatatatgttttgttcgcgagttttatcgctttaatagaaatagggcgttaca 33367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 199557 - 199626
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||| ||||||| | | |||||||||| ||||| ||| ||||||||||| ||||||||    
T  199557 gtagcgtctatttcttgaatatatatataattcgcgtgttttatcgctttaatagaaatagggcgttaca 199626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 9318 - 9258
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatag 149  Q
    |||||||||||||||| ||||||| | |||||||||||| ||||| ||| |||||||||||    
T  9318 gtagcgtctatttcttgaatatatttattattcgcgtgttttatcgctttaatagaaatag 9258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 247976 - 248080
Alignment:
Q  54 tttatatatgcatgttgttgatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcg 153  Q
    |||||||||||||||||||   | || ||||| | |||||||||||||||| ||||| | | ||||||| |||||||||| ||| ||||||| ||| | |    
T  247976 tttatatatgcatgttgtttgaatttgttgaagacgtagcgtctatttcttgaatatttatattattcgtgtgtattatcgctttaatagaagtagggtg 248075  T
Q  154 ttaca 158  Q
    |||||    
T  248076 ttaca 248080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 99108 - 99036
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||| ||||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||| |||||||||    
T  99108 atgtggcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttacac 99036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 4706 - 4647
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaata 148  Q
    |||||||||||||||| ||||||||| |||||||||||| | ||| ||| ||||||||||    
T  4706 gtagcgtctatttcttgaatatatgtattattcgcgtgtttaatcgctttaatagaaata 4647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 25581 - 25652
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||||| ||||||||| |||||||| ||| ||| | ||| ||||||||||  ||||||||    
T  25581 atgtagcgtctatttcttgaatatatgtattattcgcatgttttaccgctttaatagaaataaggcgttaca 25652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 535 - 464
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||||||||| ||||| | | ||||| |||||| ||||| ||| ||||||||||| ||||||||    
T  535 atgtagcgtctatttcttcaatatttatattatttgcgtgttttatcgctttaatagaaatagtgcgttaca 464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 22779 - 22844
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||| | ||||| | | |||||||||||| ||||||||| ||||||||||| || |||||    
T  22779 cgtctatttcgtgaatatttatattattcgcgtgttttatcactttaatagaaatagggctttaca 22844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 3240 - 3310
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||||||| ||||| | | |||||||||||| ||||| ||| ||| ||||||| |||||||||    
T  3240 gtagcgtctatttctttaatatttatattattcgcgtgttttatcgctttaatggaaatagggcgttacac 3310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 7099 - 7169
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||||||| ||||| | | |||||||||| | ||||| ||||||||||||||| | |||||||    
T  7099 gtagcgtctatttcttgaatatttatattattcgcgtattttatcgcttaaatagaaatagggagttacac 7169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 15558 - 15628
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    |||||||||||| | || ||||||||||| ||||| ||||| ||| ||||||| |||||||||||| ||||    
T  15558 cgtctatttcttgactaaatgttttattcacgtgttttatcgctttaatagaagtagagcgttacaagttg 15628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 7393 - 7462
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||||||||||||| ||||||| | |||| ||||||| ||||| ||| ||||||||||| |||||||||    
T  7393 gtagcgtctatttcttgaatatatttattat-cgcgtgttttatcgctttaatagaaatagggcgttacac 7462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 17149 - 17075
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    |||||||||||||||||||||||||  |||||||| ||| | ||  ||| ||||||||||| |||||||| ||||    
T  17149 gtagcgtctatttcttaaatatatgaattattcgcatgtttaattgctttaatagaaatagggcgttacaagttg 17075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 12679 - 12748
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||| ||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||| ||||||||    
T  12679 gtagagtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 12748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 2896 - 2828
Alignment:
Q  95 tctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    |||||||||| ||||||||| |||||||||||| ||||| ||| ||| ||||| | |||||||| ||||    
T  2896 tctatttcttgaatatatgtattattcgcgtgttttatcgctttaatcgaaatggggcgttacaagttg 2828  T

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Target: scaffold0112 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 4847 - 4779
Alignment:
Q  95 tctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacacgttg 163  Q
    |||||||||| ||||| | | |||||||||||||||||| ||| ||||||||||| || ||||| ||||    
T  4847 tctatttcttgaatatttatattattcgcgtgtattatcgctttaatagaaatagggcattacaagttg 4779  T

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Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 158
Target Start/End: Complemental strand, 103955 - 103876
Alignment:
Q  78 ttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||| | || ||||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||| ||||||||    
T  103955 ttattgaagacgtggcgtctatttcttgaatat-tatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 103876  T

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Target: scaffold0480 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 11220 - 11283
Alignment:
Q  95 tctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||| ||||||||| | | |||||||||||| ||||| ||| ||||||||||| ||||||||    
T  11220 tctattacttaaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 11283  T

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Target: scaffold0258 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 8260 - 8197
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgtta 156  Q
    |||||||||||| ||||| ||| |||||||||||| ||||| ||| ||||||| ||| ||||||    
T  8260 cgtctatttcttgaatatttgtattattcgcgtgttttatcgctttaatagaagtagggcgtta 8197  T

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Target: scaffold0148 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 35884 - 35814
Alignment:
Q  87 atgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||| ||||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||| ||||||||    
T  35884 atgtggcgtctatttcttgaatat-tatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 35814  T

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Target: scaffold0329 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 1101 - 1011
Alignment:
Q  69 tgttgatagttattgaaaatgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    |||||| |||||||||| | ||  |||||||||||| ||||| |||  ||||| ||||| ||||| ||| ||||||| ||| |||||||||    
T  1101 tgttgagagttattgaagaagtgacgtctatttcttgaatatttgtaatattcacgtgttttatcgctttaatagaagtagggcgttacac 1011  T

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Target: scaffold0161 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 25343 - 25281
Alignment:
Q  95 tctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttac 157  Q
    |||||||||| ||||| |||  |||||| |||| ||||| ||| |||||||||||||||||||    
T  25343 tctatttcttgaatatttgtaatattcgtgtgttttatcgctttaatagaaatagagcgttac 25281  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 107114 - 107184
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttacac 159  Q
    ||||| |||||||||| |||| |||| |||||||| ||| ||||  ||| ||||||||||||| |||||||    
T  107114 gtagcatctatttcttgaataaatgtattattcgcatgttttattgctttaatagaaatagagtgttacac 107184  T

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Target: scaffold0133 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 3901 - 3965
Alignment:
Q  93 cgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatagagcgttaca 158  Q
    |||||||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||| ||||||||    
T  3901 cgtctatttcttgaatat-tatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 3965  T

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Target: scaffold0331 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 11348 - 11292
Alignment:
Q  54 tttatatatgcatgttgttgatagttattgaaaatgtagcgtctatttcttaaatat 110  Q
    ||||||||||||||||| || || || ||||| | |||||||||||||||| |||||    
T  11348 tttatatatgcatgttgatgttatttgttgaagacgtagcgtctatttcttgaatat 11292  T

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Target: scaffold0292 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 8911 - 8851
Alignment:
Q  89 gtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaatag 149  Q
    ||||| |||||||||| |||| |||| |||||||| ||| |||| |||| |||||||||||    
T  8911 gtagcctctatttcttgaataaatgtattattcgcatgttttattactttaatagaaatag 8851  T

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Target: scaffold0225 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 27758 - 27682
Alignment:
Q  88 tgtagcgtctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaata-gagcgttacacgttg 163  Q
    |||||| |||||||||| |||| |||| |||||||| ||| | ||  |||||||||||||| |||||||||| ||||    
T  27758 tgtagcctctatttcttgaataaatgtattattcgcatgtttaattgcttaaatagaaataggagcgttacaagttg 27682  T

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Target: scaffold0104 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 162
Target Start/End: Complemental strand, 50955 - 50887
Alignment:
Q  95 tctatttcttaaatatatgttttattcgcgtgtattatcacttaaatagaaata-gagcgttacacgtt 162  Q
    |||||||||| |||| |||| |||||||| ||| | ||  |||||||||||||| ||||||||||||||    
T  50955 tctatttcttgaataaatgtattattcgcatgtttaattgcttaaatagaaataggagcgttacacgtt 50887  T

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