View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7067_low_14 (Length: 247)
Name: NF7067_low_14
Description: NF7067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7067_low_14 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 893836 - 893606
Alignment:
| Q |
17 |
atttctttatttagttagatttattcagaaattgttgaattcatatgttgattcaaatcctgtaatatcatgttatgtgatttactgtttaattcatttg |
116 |
Q |
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| T |
893836 |
atttctttatttagttagatttattcagaaattgttgaattcatatgttgattcaaatcctgtaatatcatgttatgtgatttactgtttaattcatttg |
893737 |
T |
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| Q |
117 |
tttcaatttaattatctttgtttttcccatctcatgtctcgggtttatttaatttctctgatttttcttctaattcttctgttgtattttcaaaatcaat |
216 |
Q |
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| T |
893736 |
tttcaatttaattatctttgtttttcccatctcatgtctcgggtttatttaatttctctgatttttcttctaattcttctgttgtattttcaaaatcaat |
893637 |
T |
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| Q |
217 |
attttaacttttacacttctcttttctgaac |
247 |
Q |
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| T |
893636 |
attttaacttttacacttctcttttctgaac |
893606 |
T |
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