View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7070_high_2 (Length: 249)
Name: NF7070_high_2
Description: NF7070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7070_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 38632143 - 38632381
Alignment:
| Q |
1 |
taccagaggccaaacctcgaacctctttcacattactccttattttacccccttcatacaatttacaaagtaacacacggtaagtatattattgatacaa |
100 |
Q |
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| T |
38632143 |
taccagaggccaaacctcgaacctctttcacattactccttattatacccccttcatacaatttacaaagtaacacacggtaagtatattattggtacaa |
38632242 |
T |
|
| Q |
101 |
atactaacatcaatgcaatgttaacgctatcataggaagtgatttttaaggatacatgtatcacttatggttgaccttggtaagtcttttaccaaaacca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
38632243 |
atactaacatcaatgcaatgttaacgctatcataggaagtgatttttaaggatacatgtatcacttatggttgaccttggtaagtcttttgccaaaaccg |
38632342 |
T |
|
| Q |
201 |
gttactcaaggatcattatttaactgtatcattgttcat |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
38632343 |
gttactcaaggatcattatttaactgtatcattgttcat |
38632381 |
T |
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