View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7070_low_3 (Length: 252)
Name: NF7070_low_3
Description: NF7070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7070_low_3 |
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Alignment Details
Target: chr3 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 32991984 - 32991739
Alignment:
| Q |
1 |
attaggtatatctagccaagacgtaattgagattgggtgatagagagacatatatatgagtgacatagaaagccaccaaaatagcagtgactccaaggtt |
100 |
Q |
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| T |
32991984 |
attaggtatatctagccaagacgtaattgagattgggtgatagagagacatatatatgagtgacatagaaagccaccaaaatagcagtgactccaaggtt |
32991885 |
T |
|
| Q |
101 |
catcaaagagccaacaagatagtattaaccttctcagttctcaagtagccgcccctagttagagacttctgtgtccttctcattttgttgccaaattcca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32991884 |
catcaaagagccaacaagatagtattaaccttctcagttctcaagtagccgcccctagttagagacttctgtgtccttctcattttgttgccaaattcca |
32991785 |
T |
|
| Q |
201 |
aatacatgacccattgaattcatcatatgtctcttgcctatgctac |
246 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
32991784 |
aatacatgacccattgaattcatcatatgtctcttgcctttgctac |
32991739 |
T |
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