View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7073_high_5 (Length: 446)
Name: NF7073_high_5
Description: NF7073
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7073_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 19 - 438
Target Start/End: Original strand, 30552804 - 30553232
Alignment:
| Q |
19 |
aacatcatcattgactcggttgctccgccgcgccgagaaaacaatgactctactccgatcaattttaacggcgaccttactcctcactttcttcttcact |
118 |
Q |
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|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
30552804 |
aacaacatcattgactcggttgctccgccgctccgagaaaacaatgactctactccgatcaattttaacggtgaccttactcctcactttcttcttcact |
30552903 |
T |
|
| Q |
119 |
ctctcaccagctttccaatccgatgagcttctcctcgacgatgaagaattcggccttgaaggcggtcgccctcaaacccgtccatcatcacctaacaccg |
218 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
30552904 |
ctctcaccagctttccaatccgacgagcttctcctcgacgatgaagaattcggcctcgaaggcggtcgccctcaaacccgtccatcgtcacctaacaccg |
30553003 |
T |
|
| Q |
219 |
cc---------accaccaccaccactcgtaagaggattcctgattccgcttccgattcaaagatccagttcacactcgaacacgctttcggcgattccga |
309 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
30553004 |
ccgccaccaccaccaccaccaccactcgtaagaggattcctgattccgcttccgattcaaagatccagttcacactcgaacacgctttcggtgattccga |
30553103 |
T |
|
| Q |
310 |
tttctctgaagctggtaacttctctgctcgtctcaaaacttggagtcacggcgctcaggttcgtcaatttctttttaattgttgatatttttcaaagcta |
409 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30553104 |
tttctctgaagctggtaacttctctgctcgtctcaaaacttggagtcacggcgctcaggttcgtcaatttctttttaattgttgatatttttcaaagcta |
30553203 |
T |
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| Q |
410 |
gtataataattcgttgattggttcttctc |
438 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
30553204 |
gtataataattcgttgattggttcttctc |
30553232 |
T |
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