View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7075_high_13 (Length: 234)
Name: NF7075_high_13
Description: NF7075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7075_high_13 |
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Alignment Details
Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 30715736 - 30715949
Alignment:
| Q |
1 |
ttgaagaggtatctgcactacggtacgacctcaacatcgagccttattacatttctctttcatgggatgaaatcaagttgtcgtttttacaagcctatta |
100 |
Q |
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| T |
30715736 |
ttgaagaagaatctgcactatggtacgacctcaacatcgagccttattacatttctctttcatgggatgaaatcaagttgtcgtttttacaagcctatta |
30715835 |
T |
|
| Q |
101 |
cgaaattgaacccgttgaggagttaaggtcagaacttatggggattcatcaaggtgagaaggaacgtgtaagatcctactttctgaggctgcaatggatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30715836 |
cgaaattgaacccgttgaggagttaaggtcagaacttatggggattcatcaaggtgagaaggaacgtgtaagatcctactttctgaggctgcaatggatt |
30715935 |
T |
|
| Q |
201 |
ttgaagcggtggcc |
214 |
Q |
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|||||||||||||| |
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| T |
30715936 |
ttgaagcggtggcc |
30715949 |
T |
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