View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7076_low_15 (Length: 239)

Name: NF7076_low_15
Description: NF7076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7076_low_15
NF7076_low_15
[»] scaffold0390 (2 HSPs)
scaffold0390 (167-223)||(7085-7141)
scaffold0390 (167-223)||(14101-14157)
[»] scaffold0234 (2 HSPs)
scaffold0234 (167-223)||(2472-2528)
scaffold0234 (167-223)||(11363-11419)
[»] scaffold0220 (1 HSPs)
scaffold0220 (167-223)||(18288-18344)
[»] chr7 (13 HSPs)
chr7 (167-223)||(11536213-11536269)
chr7 (169-225)||(18257991-18258047)
chr7 (167-223)||(29327784-29327840)
chr7 (169-223)||(18561009-18561063)
chr7 (167-223)||(11543131-11543187)
chr7 (169-223)||(12750828-12750882)
chr7 (173-223)||(12738542-12738592)
chr7 (169-223)||(15148144-15148198)
chr7 (169-223)||(15152445-15152499)
chr7 (173-221)||(13392157-13392205)
chr7 (173-223)||(39111819-39111868)
chr7 (167-199)||(2653207-2653239)
chr7 (189-225)||(2364917-2364953)
[»] chr6 (14 HSPs)
chr6 (169-225)||(25537308-25537364)
chr6 (167-223)||(27381403-27381459)
chr6 (167-223)||(27471786-27471842)
chr6 (167-223)||(29308890-29308946)
chr6 (167-223)||(29315850-29315906)
chr6 (169-223)||(16566471-16566525)
chr6 (169-223)||(17684620-17684674)
chr6 (167-223)||(17691591-17691647)
chr6 (169-223)||(189128-189182)
chr6 (169-223)||(11651725-11651779)
chr6 (169-223)||(13359420-13359474)
chr6 (18-75)||(10089534-10089591)
chr6 (174-225)||(31258069-31258120)
chr6 (190-224)||(27925772-27925806)
[»] chr5 (8 HSPs)
chr5 (167-223)||(24695617-24695673)
chr5 (167-223)||(18570014-18570070)
chr5 (169-223)||(19714649-19714703)
chr5 (173-223)||(19707369-19707419)
chr5 (172-225)||(27347626-27347679)
chr5 (173-225)||(31886537-31886589)
chr5 (167-223)||(39537962-39538018)
chr5 (171-210)||(17285896-17285935)
[»] chr4 (22 HSPs)
chr4 (167-223)||(5707320-5707376)
chr4 (167-223)||(5713948-5714004)
chr4 (167-223)||(12357136-12357192)
chr4 (167-223)||(19926911-19926967)
chr4 (167-223)||(26963640-26963696)
chr4 (167-223)||(26970463-26970519)
chr4 (167-223)||(55612683-55612739)
chr4 (167-223)||(868597-868653)
chr4 (167-223)||(10621484-10621540)
chr4 (167-223)||(10628563-10628619)
chr4 (169-223)||(4426754-4426808)
chr4 (169-223)||(18262214-18262268)
chr4 (169-223)||(28393285-28393339)
chr4 (169-225)||(5616215-5616271)
chr4 (173-225)||(5668275-5668327)
chr4 (179-223)||(8845215-8845259)
chr4 (179-223)||(8858179-8858223)
chr4 (173-225)||(35223576-35223628)
chr4 (169-223)||(18269070-18269129)
chr4 (175-213)||(20311299-20311337)
chr4 (173-225)||(10677701-10677753)
chr4 (173-225)||(10891341-10891393)
[»] chr3 (27 HSPs)
chr3 (167-223)||(6110064-6110120)
chr3 (167-223)||(8490488-8490544)
chr3 (167-223)||(10572743-10572799)
chr3 (167-223)||(13248607-13248663)
chr3 (167-223)||(18640897-18640953)
chr3 (169-223)||(13516813-13516867)
chr3 (169-223)||(16482634-16482688)
chr3 (169-223)||(17200335-17200389)
chr3 (169-223)||(18519980-18520034)
chr3 (169-223)||(18522665-18522719)
chr3 (170-223)||(13211305-13211358)
chr3 (167-223)||(15601035-15601091)
chr3 (167-223)||(15607580-15607636)
chr3 (173-223)||(1647676-1647726)
chr3 (173-223)||(10579506-10579556)
chr3 (173-223)||(17781269-17781319)
chr3 (169-223)||(18534758-18534812)
chr3 (173-223)||(32057051-32057101)
chr3 (167-220)||(15357740-15357793)
chr3 (173-220)||(19089899-19089946)
chr3 (169-214)||(18510924-18510969)
chr3 (167-223)||(29924971-29925027)
chr3 (167-223)||(29974124-29974180)
chr3 (186-223)||(15342370-15342407)
chr3 (174-223)||(24253540-24253589)
chr3 (169-223)||(16200128-16200181)
chr3 (169-223)||(16200434-16200487)
[»] chr1 (12 HSPs)
chr1 (167-223)||(18252030-18252086)
chr1 (167-223)||(18532665-18532721)
chr1 (167-223)||(27131560-27131616)
chr1 (169-223)||(16359186-16359240)
chr1 (169-223)||(21171384-21171438)
chr1 (169-223)||(27310728-27310782)
chr1 (173-223)||(36816784-36816834)
chr1 (167-223)||(3856070-3856126)
chr1 (167-223)||(22657372-22657429)
chr1 (173-225)||(27277704-27277756)
chr1 (179-214)||(9918071-9918106)
chr1 (173-225)||(30720642-30720694)
[»] scaffold0433 (1 HSPs)
scaffold0433 (167-223)||(7107-7163)
[»] scaffold0176 (1 HSPs)
scaffold0176 (167-223)||(8454-8510)
[»] chr2 (4 HSPs)
chr2 (167-223)||(21330399-21330455)
chr2 (173-225)||(19692685-19692737)
chr2 (169-225)||(18619807-18619863)
chr2 (167-223)||(18796506-18796562)
[»] chr8 (8 HSPs)
chr8 (173-223)||(6094129-6094179)
chr8 (167-223)||(21940665-21940721)
chr8 (169-223)||(22171491-22171545)
chr8 (173-223)||(24636860-24636910)
chr8 (173-222)||(24642655-24642704)
chr8 (169-211)||(28554885-28554927)
chr8 (188-225)||(2375027-2375064)
chr8 (179-211)||(38232538-38232570)
[»] scaffold0657 (1 HSPs)
scaffold0657 (167-223)||(993-1049)
[»] scaffold0186 (1 HSPs)
scaffold0186 (167-223)||(26141-26197)
[»] scaffold0063 (1 HSPs)
scaffold0063 (169-223)||(5531-5585)
[»] scaffold0008 (1 HSPs)
scaffold0008 (169-213)||(230501-230545)
[»] scaffold0565 (1 HSPs)
scaffold0565 (186-217)||(10127-10158)
[»] scaffold0326 (1 HSPs)
scaffold0326 (167-200)||(16615-16648)


Alignment Details
Target: scaffold0390 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 7141 - 7085
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7141 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 7085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 14157 - 14101
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14157 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctacaata 14101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 2528 - 2472
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2528 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 2472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 11419 - 11363
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11419 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 11363  T

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Target: scaffold0220 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 18288 - 18344
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18288 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 18344  T

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Target: chr7 (Bit Score: 57; Significance: 6e-24; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 11536269 - 11536213
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11536269 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 11536213  T

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Target: chr7; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 18258047 - 18257991
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18258047 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataat 18257991  T

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Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 29327784 - 29327840
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327784 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 29327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 18561009 - 18561063
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18561009 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 18561063  T

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Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 11543187 - 11543131
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11543187 acaatgcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 11543131  T

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Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 12750828 - 12750882
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12750828 aaggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaata 12750882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 12738542 - 12738592
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12738542 catttctttattgattttattttgtttcaaaataataaagtccctagaata 12738592  T

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Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 15148144 - 15148198
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  15148144 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaata 15148198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 15152445 - 15152499
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  15152445 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaata 15152499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 13392157 - 13392205
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaa 221  Q
    ||||||||| |||| |||||||||||||||||||||||||| |||||||    
T  13392157 catttctttgttgactttgttttgtttcaaaataataaagttcctagaa 13392205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 39111819 - 39111868
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||| |||||||||| |||||||| ||||||||||||||||||    
T  39111819 catttctttattaattttgttttatttcaaaa-aataaagtccctagaata 39111868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 2653239 - 2653207
Alignment:
Q  167 acaaggcatttctttattgattttgttttgttt 199  Q
    |||||||||||||||||||||||||||||||||    
T  2653239 acaaggcatttctttattgattttgttttgttt 2653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 2364917 - 2364953
Alignment:
Q  189 ttgttttgtttcaaaataataaagtccctagaataat 225  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  2364917 ttgttatgtttcaaaataataaagtctctagaataat 2364953  T

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Target: chr6 (Bit Score: 57; Significance: 6e-24; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 25537364 - 25537308
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25537364 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataat 25537308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 27381459 - 27381403
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381459 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 27381403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 27471842 - 27471786
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471842 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 27471786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 29308890 - 29308946
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29308890 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 29308946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 29315850 - 29315906
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29315850 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 29315906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 16566525 - 16566471
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566525 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 16566471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 17684674 - 17684620
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684674 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 17684620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 17691647 - 17691591
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17691647 acaaggcatttctttattgattttgttttctttcaaaataataaagtccctagaata 17691591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 189182 - 189128
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  189182 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaata 189128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 11651725 - 11651779
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  11651725 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaata 11651779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 13359474 - 13359420
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  13359474 aaggcatttatttatttattttgttttgtttcaaaataataaagtccctagaata 13359420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 10089591 - 10089534
Alignment:
Q  18 acatacaaatgataaattgaaccttcccactcttttcttagaaattgaaatataaagt 75  Q
    |||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||    
T  10089591 acatacaaatgaaatattgaacgttcccactcttttcttagaaattgaaatataaagt 10089534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 31258120 - 31258069
Alignment:
Q  174 atttctttattgattttgttttgtttcaaaataataaagtccctagaataat 225  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  31258120 atttctttattgcttttgttttgtttcaaaataataaagtctctaaaataat 31258069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Original strand, 27925772 - 27925806
Alignment:
Q  190 tgttttgtttcaaaataataaagtccctagaataa 224  Q
    |||||||||||||||||||||||||| ||||||||    
T  27925772 tgttttgtttcaaaataataaagtccttagaataa 27925806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 6e-24; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 24695673 - 24695617
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695673 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 24695617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 18570070 - 18570014
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18570070 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaata 18570014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 19714703 - 19714649
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  19714703 aaggcatttctttattgattttgttttatttcaaagtaataaagtccctagaata 19714649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 19707419 - 19707369
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  19707419 catttctttattgattttgttttatttcaaagtaataaagtccctagaata 19707369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 27347679 - 27347626
Alignment:
Q  172 gcatttctttattgattttgttttgtttcaaaataataaagtccctagaataat 225  Q
    |||||||||| |||||||||||||| |||||||||||||||||| |||||||||    
T  27347679 gcatttctttgttgattttgttttgattcaaaataataaagtccttagaataat 27347626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 31886537 - 31886589
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaataat 225  Q
    |||||||||| |||||||||||||||||||| ||||||||||| |||||||||    
T  31886537 catttctttagtgattttgttttgtttcaaattaataaagtccttagaataat 31886589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 39537962 - 39538018
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||| |||||||||| ||||||||||||||||||||||  | |||||| |||||||    
T  39537962 acaagccatttctttaatgattttgttttgtttcaaaatggttaagtccttagaata 39538018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 17285935 - 17285896
Alignment:
Q  171 ggcatttctttattgattttgttttgtttcaaaataataa 210  Q
    ||||||| ||||||||||||||| ||||||||||||||||    
T  17285935 ggcatttatttattgattttgttatgtttcaaaataataa 17285896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 5707320 - 5707376
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5707320 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 5707376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 5713948 - 5714004
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5713948 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 5714004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 12357136 - 12357192
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357136 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 12357192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 19926967 - 19926911
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926967 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 19926911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 26963640 - 26963696
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963640 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 26963696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 26970463 - 26970519
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970463 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 26970519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 55612683 - 55612739
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612683 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 55612739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 868597 - 868653
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  868597 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaata 868653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 10621540 - 10621484
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10621540 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaata 10621484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 10628619 - 10628563
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10628619 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaata 10628563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 4426808 - 4426754
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4426808 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaata 4426754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 18262214 - 18262268
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18262214 aaggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaata 18262268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 28393339 - 28393285
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  28393339 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaata 28393285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 5616215 - 5616271
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataat 225  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||    
T  5616215 aaggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataat 5616271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 5668327 - 5668275
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaataat 225  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  5668327 catttctttgttgattttgttttgtttcaaaataataaagtctctagaataat 5668275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 8845215 - 8845259
Alignment:
Q  179 tttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaata 8845259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 8858179 - 8858223
Alignment:
Q  179 tttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaata 8858223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 35223576 - 35223628
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaataat 225  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  35223576 catttctttgttgattttgttttgttttaaaataataaagtccctagaataat 35223628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 18269070 - 18269129
Alignment:
Q  169 aaggcatttctttattgatttt-----gttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||||||||||||     |||||||||||||||||||||||||||||||||    
T  18269070 aaggcatttctttattgattttgttttgttttgtttcaaaataataaagtccctagaata 18269129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 20311299 - 20311337
Alignment:
Q  175 tttctttattgattttgttttgtttcaaaataataaagt 213  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  20311299 tttctttattgattttgttttgttttaaaataataaagt 20311337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 10677753 - 10677701
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaataat 225  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| ||||||    
T  10677753 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataat 10677701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 10891393 - 10891341
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaataat 225  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| ||||||    
T  10891393 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataat 10891341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 6e-24; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 6110064 - 6110120
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110064 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 6110120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 8490488 - 8490544
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490488 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 8490544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 10572799 - 10572743
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572799 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 10572743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 13248607 - 13248663
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 13248663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 18640953 - 18640897
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18640953 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 18640897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 13516813 - 13516867
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13516813 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 13516867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 16482688 - 16482634
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482688 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 16482634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 17200389 - 17200335
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17200389 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 17200335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 18519980 - 18520034
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18519980 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 18520034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 18522665 - 18522719
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522665 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 18522719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 13211305 - 13211358
Alignment:
Q  170 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 13211358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 15601091 - 15601035
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15601091 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaata 15601035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 15607636 - 15607580
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607636 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaata 15607580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 1647726 - 1647676
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1647726 catttctttattgattttgttttgtttcaaaataataaagtccctagaata 1647676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 10579556 - 10579506
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10579556 catttctttattgattttgttttgtttcaaaataataaagtccctagaata 10579506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 17781319 - 17781269
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781319 catttctttattgattttgttttgtttcaaaataataaagtccctagaata 17781269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 18534758 - 18534812
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18534758 aaggcatttctttattgattttgttttgtttcaaaataataaagtccatagaata 18534812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 32057101 - 32057051
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32057101 catttctttattgattttgttttgtttcaaaataataaagtccctagaata 32057051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 15357793 - 15357740
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctaga 220  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15357793 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctaga 15357740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 19089946 - 19089899
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctaga 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19089946 catttctttattgattttgttttgtttcaaaataataaagtccctaga 19089899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 18510924 - 18510969
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18510924 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 18510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 29924971 - 29925027
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  29924971 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaata 29925027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 29974124 - 29974180
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  29974124 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaata 29974180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 15342407 - 15342370
Alignment:
Q  186 attttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaata 15342370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 24253589 - 24253540
Alignment:
Q  174 atttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||    
T  24253589 atttctttattgattttgttttacttcaaaataataaagtccttagaata 24253540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 16200128 - 16200181
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| |||||||    
T  16200128 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaata 16200181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 16200434 - 16200487
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| |||||||    
T  16200434 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaata 16200487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 6e-24; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 18252030 - 18252086
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252030 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 18252086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 18532721 - 18532665
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532721 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 18532665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 27131616 - 27131560
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131616 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 27131560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 16359240 - 16359186
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16359240 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 16359186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 21171438 - 21171384
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21171438 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaata 21171384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 27310782 - 27310728
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27310782 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaata 27310728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 36816834 - 36816784
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36816834 catttctttattgattttgttttgtttcaaaataatgaagtccctagaata 36816784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 3856126 - 3856070
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||||||||| || |||||||||||||||||||||| |||||||||||||||    
T  3856126 acaaggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaata 3856070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 22657429 - 22657372
Alignment:
Q  167 acaaggcatttctttattgatttt-gttttgtttcaaaataataaagtccctagaata 223  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  22657429 acaagacatttctttattgatttttgttttgtttcaaaataataaagttcctagaata 22657372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 27277756 - 27277704
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaataat 225  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||||||||||||    
T  27277756 catttctttgttgtttttgttttgtttcaaaataataacgtccctagaataat 27277704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 214
Target Start/End: Complemental strand, 9918106 - 9918071
Alignment:
Q  179 tttattgattttgttttgtttcaaaataataaagtc 214  Q
    |||||||||||||||||||| |||||||||||||||    
T  9918106 tttattgattttgttttgttacaaaataataaagtc 9918071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 30720694 - 30720642
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaataat 225  Q
    ||||| ||||||| |||| |||||||| ||||||||||||| ||| |||||||    
T  30720694 catttttttattggttttattttgttttaaaataataaagttcctggaataat 30720642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 7107 - 7163
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7107 acaaggtatttctttattgattttgttttgtttcaaaataataaagtccctagaata 7163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 8510 - 8454
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8510 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaata 8454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 21330455 - 21330399
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330455 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaata 21330399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 19692737 - 19692685
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaataat 225  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19692737 catttctttattgattttgttttgtttcaaaataatgaagtccctagaataat 19692685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 18619807 - 18619863
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataat 225  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  18619807 aaggaatttctttgttgattttgttttgtttcaaaataataaagtccctataataat 18619863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 18796506 - 18796562
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||| |||| ||| || |||||||||||||||||||||| |||||||||||||||    
T  18796506 acaaggaatttatttgtttattttgttttgtttcaaaataacaaagtccctagaata 18796562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 6094129 - 6094179
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6094129 catttctttattgattttgttttgtttcaaaataataaagtccctagaata 6094179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 21940665 - 21940721
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21940665 acaatgcatttctttattgattttgttttgtttcaaaataataaagttcctagaata 21940721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 22171491 - 22171545
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  22171491 aaggcatttccttattgattttgttttatttcaaaataataaagtccctagaata 22171545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 24636860 - 24636910
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24636860 catttctttcttgattttgttttgtttcaaaataataaagtccctagaata 24636910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 24642655 - 24642704
Alignment:
Q  173 catttctttattgattttgttttgtttcaaaataataaagtccctagaat 222  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24642655 catttctttattgattttgttttgtttcaaaatcataaagtccctagaat 24642704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 28554885 - 28554927
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaa 211  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  28554885 aaggcatttctttattgattttgtttagtttcaaaataataaa 28554927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 2375027 - 2375064
Alignment:
Q  188 tttgttttgtttcaaaataataaagtccctagaataat 225  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  2375027 tttgttttgtttcaaaataataaactccctataataat 2375064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 38232570 - 38232538
Alignment:
Q  179 tttattgattttgttttgtttcaaaataataaa 211  Q
    ||||||||||||||||| |||||||||||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa 38232538  T

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Target: scaffold0657 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 993 - 1049
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  993 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctaaaata 1049  T

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Target: scaffold0186 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 26197 - 26141
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26197 acaagacatttctttattgattttgttttgtttcaaaataataaagtccttagaata 26141  T

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Target: scaffold0063 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 5531 - 5585
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaata 223  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  5531 aaggcatttctttattgatttatttttgtttcaaaataataaagtccctagaata 5585  T

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Target: scaffold0008 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 230545 - 230501
Alignment:
Q  169 aaggcatttctttattgattttgttttgtttcaaaataataaagt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  230545 aaggcatttctttattgattttgttttgtttcaaaataataaagt 230501  T

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Target: scaffold0565 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 217
Target Start/End: Complemental strand, 10158 - 10127
Alignment:
Q  186 attttgttttgtttcaaaataataaagtccct 217  Q
    ||||||||||||||||||||||||||||||||    
T  10158 attttgttttgtttcaaaataataaagtccct 10127  T

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Target: scaffold0326 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 200
Target Start/End: Original strand, 16615 - 16648
Alignment:
Q  167 acaaggcatttctttattgattttgttttgtttc 200  Q
    |||||||||||||||||||||||||||||| |||    
T  16615 acaaggcatttctttattgattttgttttgnttc 16648  T

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