View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7077_low_6 (Length: 225)

Name: NF7077_low_6
Description: NF7077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7077_low_6
NF7077_low_6
[»] chr3 (55 HSPs)
chr3 (8-218)||(33341812-33342022)
chr3 (8-206)||(7853913-7854111)
chr3 (8-218)||(54685415-54685625)
chr3 (43-213)||(17956103-17956274)
chr3 (30-213)||(30152893-30153078)
chr3 (39-213)||(45581591-45581767)
chr3 (59-213)||(54038243-54038398)
chr3 (89-207)||(16996176-16996294)
chr3 (86-207)||(50112168-50112289)
chr3 (59-207)||(19570805-19570953)
chr3 (8-147)||(19946629-19946768)
chr3 (83-207)||(12349847-12349970)
chr3 (97-204)||(317628-317735)
chr3 (87-213)||(16261463-16261589)
chr3 (86-207)||(22144389-22144510)
chr3 (87-213)||(3992560-3992686)
chr3 (87-213)||(53771051-53771177)
chr3 (68-204)||(16182065-16182202)
chr3 (87-207)||(6154448-6154567)
chr3 (87-213)||(2844201-2844327)
chr3 (87-213)||(23492383-23492509)
chr3 (83-207)||(6146863-6146986)
chr3 (89-207)||(13817527-13817642)
chr3 (83-207)||(35123702-35123826)
chr3 (83-207)||(14298427-14298551)
chr3 (83-207)||(14304054-14304178)
chr3 (83-207)||(53898572-53898696)
chr3 (39-207)||(17523006-17523176)
chr3 (87-213)||(38167924-38168050)
chr3 (87-207)||(17100663-17100783)
chr3 (87-207)||(17101348-17101468)
chr3 (8-147)||(47784924-47785064)
chr3 (59-152)||(28558187-28558282)
chr3 (59-207)||(14295419-14295569)
chr3 (83-204)||(11329081-11329202)
chr3 (56-207)||(19260956-19261108)
chr3 (83-207)||(54424018-54424142)
chr3 (83-185)||(17139514-17139616)
chr3 (83-198)||(12560362-12560477)
chr3 (51-185)||(14528151-14528286)
chr3 (8-89)||(9303343-9303425)
chr3 (87-207)||(12349656-12349781)
chr3 (83-185)||(12488865-12488967)
chr3 (154-207)||(34439460-34439513)
chr3 (45-184)||(17204667-17204807)
chr3 (88-199)||(8631801-8631912)
chr3 (51-177)||(55440996-55441123)
chr3 (86-207)||(14301074-14301196)
chr3 (84-123)||(14059414-14059453)
chr3 (85-204)||(17938582-17938701)
chr3 (36-162)||(38811170-38811297)
chr3 (35-75)||(1990759-1990799)
chr3 (85-185)||(16880131-16880231)
chr3 (36-117)||(17960520-17960602)
chr3 (177-207)||(28558271-28558301)
[»] chr5 (25 HSPs)
chr5 (9-207)||(11583982-11584184)
chr5 (51-213)||(2031783-2031946)
chr5 (30-213)||(11342635-11342821)
chr5 (30-207)||(1168321-1168500)
chr5 (86-207)||(21397098-21397222)
chr5 (89-207)||(28261533-28261651)
chr5 (87-213)||(21204936-21205062)
chr5 (97-206)||(21646857-21646966)
chr5 (89-207)||(24475595-24475708)
chr5 (59-207)||(11337303-11337451)
chr5 (87-207)||(20712086-20712206)
chr5 (89-207)||(4865274-4865393)
chr5 (87-213)||(21650705-21650831)
chr5 (86-206)||(21906729-21906846)
chr5 (83-207)||(24183249-24183370)
chr5 (8-90)||(16105573-16105656)
chr5 (8-90)||(109075-109158)
chr5 (44-198)||(19405503-19405658)
chr5 (83-177)||(23466463-23466557)
chr5 (36-204)||(7728378-7728547)
chr5 (100-204)||(3673885-3673989)
chr5 (83-198)||(23493925-23494040)
chr5 (9-47)||(24225596-24225634)
chr5 (44-119)||(16595474-16595550)
chr5 (36-119)||(32966352-32966436)
[»] chr8 (30 HSPs)
chr8 (51-213)||(41506928-41507091)
chr8 (43-213)||(24716981-24717152)
chr8 (87-213)||(39115285-39115411)
chr8 (89-207)||(22234920-22235038)
chr8 (59-204)||(41246639-41246785)
chr8 (59-207)||(19993171-19993320)
chr8 (83-207)||(37611675-37611798)
chr8 (83-207)||(20573309-20573433)
chr8 (87-207)||(20481615-20481735)
chr8 (87-206)||(274453-274572)
chr8 (87-206)||(641277-641396)
chr8 (87-206)||(827083-827202)
chr8 (87-213)||(16039000-16039126)
chr8 (83-204)||(20647949-20648070)
chr8 (83-204)||(20654025-20654146)
chr8 (83-159)||(25122543-25122618)
chr8 (44-198)||(39446892-39447046)
chr8 (83-196)||(21681008-21681121)
chr8 (83-123)||(20567200-20567240)
chr8 (83-147)||(20567335-20567399)
chr8 (83-147)||(20573528-20573592)
chr8 (30-140)||(29759893-29760005)
chr8 (36-198)||(38533607-38533770)
chr8 (36-185)||(5854572-5854722)
chr8 (87-213)||(24385871-24385988)
chr8 (151-204)||(20561751-20561804)
chr8 (36-116)||(22736046-22736127)
chr8 (59-119)||(15969800-15969860)
chr8 (43-204)||(23837163-23837325)
chr8 (83-160)||(23226240-23226317)
[»] scaffold0120 (2 HSPs)
scaffold0120 (8-207)||(21442-21642)
scaffold0120 (8-207)||(31141-31341)
[»] scaffold1867 (1 HSPs)
scaffold1867 (8-207)||(75-274)
[»] chr6 (26 HSPs)
chr6 (43-213)||(35015276-35015447)
chr6 (8-213)||(18583264-18583453)
chr6 (43-207)||(19983416-19983581)
chr6 (89-206)||(25744331-25744448)
chr6 (8-147)||(18823573-18823712)
chr6 (86-207)||(32898799-32898920)
chr6 (83-207)||(22440941-22441064)
chr6 (8-147)||(18839428-18839567)
chr6 (78-213)||(26089736-26089871)
chr6 (87-213)||(23994933-23995059)
chr6 (78-213)||(18002615-18002750)
chr6 (59-204)||(31628249-31628395)
chr6 (87-213)||(15742339-15742468)
chr6 (83-207)||(13014826-13014949)
chr6 (87-206)||(18777156-18777275)
chr6 (90-204)||(18432656-18432770)
chr6 (83-204)||(16086023-16086144)
chr6 (8-90)||(4991002-4991085)
chr6 (30-204)||(18398890-18399065)
chr6 (87-207)||(18570289-18570409)
chr6 (43-204)||(18381803-18381965)
chr6 (8-119)||(17083383-17083496)
chr6 (51-185)||(25367376-25367511)
chr6 (83-204)||(16106527-16106643)
chr6 (36-204)||(22361885-22362054)
chr6 (94-159)||(28195259-28195324)
[»] scaffold0833 (1 HSPs)
scaffold0833 (8-185)||(3230-3407)
[»] chr7 (32 HSPs)
chr7 (59-213)||(111388-111542)
chr7 (30-213)||(126366-126551)
chr7 (39-213)||(32494165-32494341)
chr7 (8-204)||(7284180-7284376)
chr7 (59-207)||(39046740-39046889)
chr7 (87-213)||(42056408-42056534)
chr7 (51-207)||(11287390-11287547)
chr7 (87-213)||(2190305-2190431)
chr7 (59-207)||(35094798-35094946)
chr7 (83-207)||(12758993-12759117)
chr7 (87-213)||(2028931-2029057)
chr7 (87-213)||(3049593-3049719)
chr7 (86-207)||(15822548-15822669)
chr7 (87-207)||(3895035-3895155)
chr7 (83-207)||(47289788-47289911)
chr7 (43-213)||(1937131-1937290)
chr7 (83-185)||(45452305-45452407)
chr7 (83-207)||(44865234-44865360)
chr7 (59-204)||(26070384-26070530)
chr7 (59-204)||(26094171-26094317)
chr7 (51-207)||(12248237-12248395)
chr7 (83-207)||(143652-143769)
chr7 (83-207)||(16570122-16570247)
chr7 (83-207)||(16595415-16595540)
chr7 (83-185)||(49047813-49047915)
chr7 (44-207)||(13274753-13274918)
chr7 (8-161)||(14272049-14272203)
chr7 (83-207)||(12369957-12370081)
chr7 (36-185)||(16915067-16915217)
chr7 (43-213)||(17224048-17224220)
chr7 (36-185)||(48356602-48356752)
chr7 (83-213)||(13377535-13377666)
[»] scaffold0686 (1 HSPs)
scaffold0686 (43-213)||(6202-6373)
[»] scaffold0184 (1 HSPs)
scaffold0184 (43-213)||(31399-31570)
[»] scaffold0158 (2 HSPs)
scaffold0158 (8-207)||(24890-25088)
scaffold0158 (78-207)||(25213-25341)
[»] scaffold0078 (1 HSPs)
scaffold0078 (43-213)||(41274-41445)
[»] chr4 (29 HSPs)
chr4 (30-213)||(14951713-14951898)
chr4 (43-206)||(25119333-25119498)
chr4 (43-213)||(5682646-5682817)
chr4 (89-207)||(53704850-53704968)
chr4 (43-207)||(34395222-34395387)
chr4 (83-211)||(55376710-55376838)
chr4 (86-211)||(23270047-23270172)
chr4 (86-207)||(44055924-44056045)
chr4 (87-207)||(21959580-21959700)
chr4 (99-207)||(30457925-30458033)
chr4 (83-207)||(820033-820153)
chr4 (89-207)||(44346839-44346957)
chr4 (59-207)||(16732150-16732299)
chr4 (87-213)||(15272431-15272557)
chr4 (89-205)||(53907818-53907931)
chr4 (99-207)||(8872588-8872699)
chr4 (83-207)||(12837317-12837441)
chr4 (83-206)||(45458973-45459096)
chr4 (87-207)||(30232613-30232733)
chr4 (44-198)||(13809636-13809791)
chr4 (8-90)||(16522748-16522831)
chr4 (51-185)||(18494467-18494602)
chr4 (8-90)||(9295624-9295707)
chr4 (90-184)||(27960984-27961078)
chr4 (83-204)||(52265628-52265749)
chr4 (8-47)||(7186120-7186159)
chr4 (83-204)||(15044834-15044955)
chr4 (36-119)||(37957230-37957314)
chr4 (83-213)||(15109459-15109590)
[»] scaffold0039 (2 HSPs)
scaffold0039 (59-213)||(12639-12794)
scaffold0039 (59-184)||(19049-19175)
[»] scaffold0116 (1 HSPs)
scaffold0116 (43-188)||(30056-30202)
[»] chr1 (20 HSPs)
chr1 (30-213)||(22366970-22367154)
chr1 (59-213)||(21859992-21860147)
chr1 (30-213)||(15861545-15861728)
chr1 (48-213)||(44035090-44035255)
chr1 (78-207)||(49967651-49967780)
chr1 (83-207)||(22403227-22403350)
chr1 (83-207)||(35522436-35522560)
chr1 (89-207)||(41212081-41212202)
chr1 (59-207)||(21718210-21718358)
chr1 (75-207)||(27329872-27330005)
chr1 (87-207)||(35054766-35054886)
chr1 (44-183)||(51627805-51627945)
chr1 (83-185)||(9784239-9784341)
chr1 (36-119)||(27674755-27674838)
chr1 (37-119)||(22829629-22829712)
chr1 (83-185)||(17608934-17609036)
chr1 (36-119)||(19603055-19603139)
chr1 (36-116)||(38033882-38033962)
chr1 (137-204)||(9784184-9784248)
chr1 (43-147)||(20177140-20177245)
[»] scaffold0016 (4 HSPs)
scaffold0016 (43-213)||(162297-162469)
scaffold0016 (89-207)||(164227-164345)
scaffold0016 (43-213)||(166383-166547)
scaffold0016 (43-147)||(116690-116795)
[»] scaffold0034 (3 HSPs)
scaffold0034 (87-213)||(79874-80000)
scaffold0034 (83-207)||(46171-46295)
scaffold0034 (83-207)||(40664-40788)
[»] scaffold0310 (2 HSPs)
scaffold0310 (8-204)||(234-430)
scaffold0310 (8-84)||(6603-6679)
[»] chr2 (23 HSPs)
chr2 (43-213)||(22274688-22274858)
chr2 (43-213)||(22283921-22284091)
chr2 (59-207)||(23836822-23836971)
chr2 (86-207)||(32465867-32465988)
chr2 (89-207)||(25876036-25876154)
chr2 (87-213)||(9653015-9653141)
chr2 (87-213)||(21274168-21274293)
chr2 (98-211)||(6879458-6879571)
chr2 (83-206)||(4448251-4448374)
chr2 (8-161)||(19433495-19433649)
chr2 (43-207)||(25601989-25602154)
chr2 (83-207)||(271176-271300)
chr2 (83-207)||(28974055-28974179)
chr2 (59-171)||(27261787-27261900)
chr2 (39-204)||(36890805-36890972)
chr2 (44-184)||(22579999-22580140)
chr2 (8-90)||(24826961-24827044)
chr2 (36-162)||(3403-3529)
chr2 (8-73)||(25212977-25213042)
chr2 (8-66)||(43645824-43645882)
chr2 (44-207)||(24571408-24571572)
chr2 (83-119)||(722401-722437)
chr2 (35-75)||(24884643-24884683)
[»] scaffold0342 (1 HSPs)
scaffold0342 (48-213)||(570-736)
[»] scaffold0021 (3 HSPs)
scaffold0021 (59-207)||(132367-132516)
scaffold0021 (51-207)||(11660-11818)
scaffold0021 (91-206)||(88289-88404)
[»] scaffold0091 (2 HSPs)
scaffold0091 (94-207)||(32220-32333)
scaffold0091 (94-207)||(41970-42083)
[»] scaffold0396 (1 HSPs)
scaffold0396 (68-207)||(11825-11964)
[»] scaffold0008 (1 HSPs)
scaffold0008 (86-207)||(22700-22821)
[»] scaffold0001 (2 HSPs)
scaffold0001 (86-207)||(70739-70860)
scaffold0001 (83-211)||(60812-60940)
[»] scaffold0251 (2 HSPs)
scaffold0251 (87-213)||(13505-13631)
scaffold0251 (87-213)||(21479-21605)
[»] scaffold0240 (1 HSPs)
scaffold0240 (89-207)||(7581-7699)
[»] scaffold0175 (1 HSPs)
scaffold0175 (87-213)||(14959-15085)
[»] scaffold0480 (2 HSPs)
scaffold0480 (86-207)||(5363-5484)
scaffold0480 (51-207)||(8998-9156)
[»] scaffold0012 (1 HSPs)
scaffold0012 (43-207)||(253106-253271)
[»] scaffold0083 (2 HSPs)
scaffold0083 (89-207)||(14889-15004)
scaffold0083 (89-148)||(14229-14288)
[»] scaffold0673 (2 HSPs)
scaffold0673 (89-207)||(6962-7083)
scaffold0673 (86-207)||(939-1060)
[»] scaffold0077 (1 HSPs)
scaffold0077 (39-207)||(15588-15761)
[»] scaffold0597 (1 HSPs)
scaffold0597 (87-213)||(1097-1223)
[»] scaffold0234 (1 HSPs)
scaffold0234 (87-213)||(17523-17649)
[»] scaffold0035 (2 HSPs)
scaffold0035 (51-204)||(109582-109736)
scaffold0035 (51-206)||(118081-118237)
[»] scaffold0032 (1 HSPs)
scaffold0032 (87-213)||(55591-55717)
[»] scaffold0044 (1 HSPs)
scaffold0044 (86-207)||(38307-38428)
[»] scaffold0014 (2 HSPs)
scaffold0014 (83-204)||(85338-85459)
scaffold0014 (51-213)||(159275-159436)
[»] scaffold0011 (2 HSPs)
scaffold0011 (86-207)||(254931-255052)
scaffold0011 (86-207)||(261537-261658)
[»] scaffold0190 (1 HSPs)
scaffold0190 (44-207)||(9903-10067)
[»] scaffold0610 (1 HSPs)
scaffold0610 (59-207)||(693-842)
[»] scaffold0706 (1 HSPs)
scaffold0706 (87-213)||(6662-6788)
[»] scaffold0004 (2 HSPs)
scaffold0004 (87-213)||(186645-186770)
scaffold0004 (87-213)||(193607-193732)
[»] scaffold0465 (1 HSPs)
scaffold0465 (87-204)||(10094-10211)
[»] scaffold0359 (2 HSPs)
scaffold0359 (83-204)||(1323-1444)
scaffold0359 (99-207)||(11771-11876)
[»] scaffold0338 (1 HSPs)
scaffold0338 (51-207)||(8960-9117)
[»] scaffold0195 (1 HSPs)
scaffold0195 (59-207)||(635-784)
[»] scaffold0574 (1 HSPs)
scaffold0574 (87-213)||(9626-9752)
[»] scaffold0037 (2 HSPs)
scaffold0037 (87-213)||(94985-95111)
scaffold0037 (87-207)||(24845-24965)
[»] scaffold0160 (2 HSPs)
scaffold0160 (59-207)||(2-151)
scaffold0160 (51-147)||(3492-3589)
[»] scaffold0025 (1 HSPs)
scaffold0025 (87-207)||(146611-146731)
[»] scaffold0150 (2 HSPs)
scaffold0150 (8-114)||(28466-28573)
scaffold0150 (8-57)||(21637-21686)
[»] scaffold0022 (3 HSPs)
scaffold0022 (59-207)||(112662-112808)
scaffold0022 (83-185)||(109596-109698)
scaffold0022 (36-123)||(103123-103211)
[»] scaffold0075 (1 HSPs)
scaffold0075 (43-204)||(4906-5068)
[»] scaffold0068 (2 HSPs)
scaffold0068 (83-207)||(48154-48277)
scaffold0068 (83-207)||(61602-61725)
[»] scaffold1164 (1 HSPs)
scaffold1164 (30-181)||(1332-1485)
[»] scaffold0117 (1 HSPs)
scaffold0117 (83-204)||(11688-11809)
[»] scaffold0103 (1 HSPs)
scaffold0103 (83-204)||(33668-33789)
[»] scaffold0303 (1 HSPs)
scaffold0303 (87-213)||(147-273)
[»] scaffold0122 (1 HSPs)
scaffold0122 (51-149)||(24372-24471)
[»] scaffold0028 (2 HSPs)
scaffold0028 (8-90)||(130486-130569)
scaffold0028 (138-207)||(89586-89655)
[»] scaffold0554 (1 HSPs)
scaffold0554 (51-162)||(1889-2001)
[»] scaffold0740 (1 HSPs)
scaffold0740 (143-206)||(4351-4414)
[»] scaffold0095 (1 HSPs)
scaffold0095 (44-198)||(33854-34008)
[»] scaffold0031 (3 HSPs)
scaffold0031 (44-182)||(31010-31149)
scaffold0031 (36-119)||(97403-97487)
scaffold0031 (140-198)||(70676-70734)
[»] scaffold0231 (1 HSPs)
scaffold0231 (11-66)||(12992-13048)
[»] scaffold0092 (1 HSPs)
scaffold0092 (83-177)||(3325-3419)
[»] scaffold0053 (1 HSPs)
scaffold0053 (43-204)||(76967-77129)
[»] scaffold0080 (1 HSPs)
scaffold0080 (36-147)||(43975-44087)
[»] scaffold0017 (1 HSPs)
scaffold0017 (8-48)||(12694-12734)
[»] scaffold1272 (1 HSPs)
scaffold1272 (39-161)||(270-393)
[»] scaffold0700 (1 HSPs)
scaffold0700 (36-198)||(2483-2646)
[»] scaffold0589 (1 HSPs)
scaffold0589 (59-121)||(7815-7878)
[»] scaffold0090 (1 HSPs)
scaffold0090 (8-43)||(3392-3427)
[»] scaffold1734 (1 HSPs)
scaffold1734 (43-100)||(1364-1422)
[»] scaffold0483 (1 HSPs)
scaffold0483 (39-124)||(6622-6708)


Alignment Details
Target: chr3 (Bit Score: 171; Significance: 5e-92; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 8 - 218
Target Start/End: Original strand, 33341812 - 33342022
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagc 107  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  33341812 acataatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 33341911  T
Q  108 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33341912 catgaattatcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcataattcatcaacaaccatgcataattcaccaattgag 33342011  T
Q  208 tataatctacc 218  Q
     ||||| ||||    
T  33342012 cataatttacc 33342022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 8 - 206
Target Start/End: Original strand, 7853913 - 7854111
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagc 107  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||| ||||||||||||||||    
T  7853913 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgattcatgcaaacccaagc 7854012  T
Q  108 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattga 206  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  7854013 catgaattatcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattga 7854111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 8 - 218
Target Start/End: Complemental strand, 54685625 - 54685415
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagc 107  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||| ||| ||||||||  ||||||||||||||||||||||| ||||||    
T  54685625 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaacagcaactcatttctcaacaacaatcatgaatcatgcaaatccaagc 54685526  T
Q  108 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  54685525 catgaattatcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 54685426  T
Q  208 tataatctacc 218  Q
     ||||| ||||    
T  54685425 cataatttacc 54685415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 17956274 - 17956103
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| |||||||||||||||||||||| |||| || ||||||||  ||||||||||||||||    
T  17956274 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagtcatgtatcatcatcaacaatatgactaaacaaca 17956175  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  17956174 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataatacaccaattgagtataat 17956103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 30 - 213
Target Start/End: Original strand, 30152893 - 30153078
Alignment:
Q  30 tcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 127  Q
    |||| ||||||||||||| || ||| ||| ||||||||| |||||||  ||||||| ||||||||||||||||||||||||||  || ||||||||  ||    
T  30152893 tcataatcaacccattttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaat 30152992  T
Q  128 atgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  30152993 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 30153078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 39 - 213
Target Start/End: Original strand, 45581591 - 45581767
Alignment:
Q  39 acccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 136  Q
    ||||||||| || ||||||  |||||||||| ||||||  ||||||| | |||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  45581591 acccattttcaccaaaccaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaa 45581690  T
Q  137 caacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||    
T  45581691 caacaacaacaaccattaatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcataat 45581767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 59 - 213
Target Start/End: Complemental strand, 54038398 - 54038243
Alignment:
Q  59 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    |||||||||| ||||||| ||||||| | |||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||    
T  54038398 aacaacaatttatttcttaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaactatatgactaaacaacaacaacaaccattaatc 54038299  T
Q  158 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||| || |||||    
T  54038298 atgaaacatatcacatttcatcaacaaccatgcataattcaccaatttagcataat 54038243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 89 - 207
Target Start/End: Complemental strand, 16996294 - 16996176
Alignment:
Q  89 gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccat 188  Q
    |||| |||||||| |||||||||||||||||||||  | |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||    
T  16996294 gaattatgcaaactcaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaat 16996195  T
Q  189 gcataattcaccaattgag 207  Q
    |||||||||||||||||||    
T  16996194 gcataattcaccaattgag 16996176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 50112289 - 50112168
Alignment:
Q  86 catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    |||||||||||||||| |||||||||||||||||||||  | |||||||||||||||||||| | |||||||||||||| ||||| ||||||||||||||    
T  50112289 catgaatcatgcaaactcaagccatgaattatcatcaacaacatgactaaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaac 50112190  T
Q  186 catgcataattcaccaattgag 207  Q
     |||||||||||||||||||||    
T  50112189 aatgcataattcaccaattgag 50112168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 207
Target Start/End: Complemental strand, 19570953 - 19570805
Alignment:
Q  59 aacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 158  Q
    |||||||  ||||||||  ||||||| || |||| |||||||| |||||||||||||||||||||  | |||||||||||||||||||||| ||||||||    
T  19570953 aacaacatctcatttctcaacaacaaccaagaattatgcaaactcaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatca 19570854  T
Q  159 tgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    |||||| ||||| |||||| ||||||| |||||||||||||||||||||    
T  19570853 tgaaacttatcacaattcaccaacaacaatgcataattcaccaattgag 19570805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 19946629 - 19946768
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagc 107  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  19946629 acatcatcaaaatcaaacttctatattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 19946728  T
Q  108 catgaattatcatcaaacatatgactaaacaacaacaaca 147  Q
    |||| |||||||||||  | |||||  | |||||||||||    
T  19946729 catggattatcatcaacaacatgacatatcaacaacaaca 19946768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 12349970 - 12349847
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    ||||||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||    
T  12349970 aatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgacttaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaac 12349872  T
Q  183 aaccatgcataattcaccaattgag 207  Q
     || |||||||||||||||||||||    
T  12349871 tacgatgcataattcaccaattgag 12349847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 97 - 204
Target Start/End: Complemental strand, 317735 - 317628
Alignment:
Q  97 caaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataatt 196  Q
    ||||| |||||||||||||||||||||  | |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||    
T  317735 caaactcaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaatgcataatt 317636  T
Q  197 caccaatt 204  Q
    ||||||||    
T  317635 caccaatt 317628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 16261463 - 16261589
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||    
T  16261463 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 16261562  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  16261563 atgcataattcaccaattgagcataat 16261589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 22144510 - 22144389
Alignment:
Q  86 catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    |||||||||||||||||||||||||| |||||||||||  | ||| || ||||||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  22144510 catgaatcatgcaaacccaagccatgtattatcatcaacaacatggcttaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaacaac 22144411  T
Q  186 catgcataattcaccaattgag 207  Q
     ||||||| |||||||||||||    
T  22144410 aatgcatacttcaccaattgag 22144389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 3992560 - 3992686
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||||||||| ||||| |||||||||||||||    
T  3992560 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacc 3992659  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  3992660 atgcataattcaccaattgagcataat 3992686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 53771051 - 53771177
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||  |  | || ||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||    
T  53771051 atgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 53771150  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  53771151 atgcataattcaccaattgagcataat 53771177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 68 - 204
Target Start/End: Complemental strand, 16182202 - 16182065
Alignment:
Q  68 tcatttcttgacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacat 166  Q
    ||||||||  ||||||||| | |||| ||||||||||||||||||||||||||||||  | ||||||||| |||||||||||| ||||||||| |||| |    
T  16182202 tcatttctcaacaacaatccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaaaaacaacaacaacaattgatcattaaactt 16182103  T
Q  167 atcaaaattcatcaacaaccatgcataattcaccaatt 204  Q
    |||| ||||||||||| || ||||||||||||||||||    
T  16182102 atcacaattcatcaacgacaatgcataattcaccaatt 16182065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 6154567 - 6154448
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    ||||||||||||| |||||||||||||||||||||||  | |||||| ||||| ||||||||| |||||||||||||| ||||| |||||||||| |||     
T  6154567 atgaatcatgcaa-cccaagccatgaattatcatcaacaacatgacttaacaataacaacaacaattgatcatgaaacttatcacaattcatcaataaca 6154469  T
Q  187 atgcataattcaccaattgag 207  Q
    |||||||||||||||||||||    
T  6154468 atgcataattcaccaattgag 6154448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 2844201 - 2844327
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||||||||| ||||| |||||||||| ||||    
T  2844201 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaagaacc 2844300  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  2844301 atgcataattcaccaattgagcataat 2844327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 23492383 - 23492509
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||    
T  23492383 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 23492482  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    || |||||||||||| ||||| |||||    
T  23492483 atccataattcaccatttgagcataat 23492509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 6146986 - 6146863
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||| |||||||||||||||||||| |||||  | |||||| |||||||||| |||| ||||| |||||||| ||||| |||||||||||    
T  6146986 aatcatgaatcatg-aaacccaagccatgaattattatcaacaacatgacttaacaacaacagcaacaattgaccatgaaacttatcacaattcatcaac 6146888  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| |||||| ||||||||||||||    
T  6146887 aacaatgcatgattcaccaattgag 6146863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 89 - 207
Target Start/End: Original strand, 13817527 - 13817642
Alignment:
Q  89 gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccat 188  Q
    |||| ||||||||||||||||||||||||||||||  | |||||||||||   |||||||| |||||||||||||| ||||| |||||| ||||||| ||    
T  13817527 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaaca---acaacaacaattgatcatgaaacttatcacaattcaccaacaacaat 13817623  T
Q  189 gcataattcaccaattgag 207  Q
    |||||||||||||||||||    
T  13817624 gcataattcaccaattgag 13817642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 35123702 - 35123826
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    ||||||||||||||||||||||| |||||||||||||||||  | |||||  | ||||||||||| | |||||||||||||| ||||| ||||||  |||    
T  35123702 aatcatgaatcatgcaaacccaaaccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaataac 35123801  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| | |||||||||||||||||||    
T  35123802 aacaaagcataattcaccaattgag 35123826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 14298427 - 14298551
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||||||||||||||||||||||||||||  | |||||  |  || ||||||| | |||||||||||||| ||||| |||||  ||||    
T  14298427 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatattaataacaacatcaattgatcatgaaacttatcacaattcgacaac 14298526  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| | |||||||||||||||||||    
T  14298527 aacaaagcataattcaccaattgag 14298551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 14304054 - 14304178
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||||||||||||||||||||||||||||  | |||||  |  || ||||||| | |||||||||||||| ||||| |||||  ||||    
T  14304054 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatattaataacaacatcaattgatcatgaaacttatcacaattcgacaac 14304153  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| | |||||||||||||||||||    
T  14304154 aacaaagcataattcaccaattgag 14304178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 53898696 - 53898572
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    ||||||||||| ||||||||||||||||||||||||| |||  | |||||  | |||||||||||   |||||||||||||| ||||| ||| || ||||    
T  53898696 aatcatgaatcttgcaaacccaagccatgaattatcaccaacaacatgacatatcaacaacaacattaattgatcatgaaacttatcacaatgcaacaac 53898597  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| |||||||||||||||||||||    
T  53898596 aacaatgcataattcaccaattgag 53898572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 207
Target Start/End: Complemental strand, 17523176 - 17523006
Alignment:
Q  39 acccatttt-acaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaa-acatatgactaaa 136  Q
    ||||||||| || ||| ||| |||||||  ||||||||  |||  |||||| |||||||||||||||||||||||||||||||||| | |  ||||| |     
T  17523176 acccattttcaccaaaacaccaacaacatctcatttctcaacacaaatcataaatcatgcaaacccaagccatgaattatcatcaacaaaattgacttag 17523077  T
Q  137 caacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    ||||||||||| | |||| ||||||||| ||||| |||||||||| |||   |||||||||||||||||||    
T  17523076 caacaacaacatcaattggtcatgaaacttatcacaattcatcaataacatagcataattcaccaattgag 17523006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 38167924 - 38168050
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||||||||| ||| | ||||||||||||||     
T  38167924 atgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatctattgatcatgaaacttattacaattcatcaacaaca 38168023  T
Q  187 atgcataattcaccaattgagtataat 213  Q
      ||||||||||||||||||| |||||    
T  38168024 tagcataattcaccaattgagcataat 38168050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 17100663 - 17100783
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||| |||| | |||||||||||||| ||||| ||||||||||||||     
T  17100663 atgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaataacatcaattgatcatgaaacttatcacaattcatcaacaaca 17100762  T
Q  187 atgcataattcaccaattgag 207  Q
      |||||||||||||||||||    
T  17100763 tagcataattcaccaattgag 17100783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 17101348 - 17101468
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||| |||| | |||||||||||||| ||||| ||||||||||||||     
T  17101348 atgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaataacatcaattgatcatgaaacttatcacaattcatcaacaaca 17101447  T
Q  187 atgcataattcaccaattgag 207  Q
      |||||||||||||||||||    
T  17101448 tagcataattcaccaattgag 17101468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 47785064 - 47784924
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaag 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||| || ||| |||||||| ||||||||   |||| |||||||||| ||| | |||||||    
T  47785064 acatcatcaaaatcaaacttcttcattatcaacccattttacagaatcaccaacaacaactcatttctcaccaacaaatcatgaattatgaacacccaag 47784965  T
Q  107 ccatgaattatcatcaaacatatgactaaacaacaacaaca 147  Q
    |||||||| || | |||  | || ||| |||||||||||||    
T  47784964 ccatgaatcattaacaacaacatcacttaacaacaacaaca 47784924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 28558187 - 28558282
Alignment:
Q  59 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa-caacaaccat 152  Q
    |||||||||| ||||||  ||||||| | |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  28558187 aacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaacaatcaacaaccat 28558282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 59 - 207
Target Start/End: Original strand, 14295419 - 14295569
Alignment:
Q  59 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    |||||||  ||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||  | || ||| |  |||||||||| | |||||||    
T  14295419 aacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatcacttagaaacaacaacatcaattgatc 14295518  T
Q  158 atgaaacatatcaaaattcatcaacaaccatgcataattc-accaattgag 207  Q
    ||||| | ||||| |||||| |||||||   ||||||||| ||||||||||    
T  14295519 atgaatcttatcacaattcaacaacaacatagcataattcaaccaattgag 14295569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 11329202 - 11329081
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||| ||||||||||||||||||||||||  | || ||| | ||||||||||| | |||||||||||| | ||||| |||||| ||||    
T  11329202 aatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaac 11329103  T
Q  183 aaccatgcataattcaccaatt 204  Q
    |||   |||||||||| |||||    
T  11329102 aacatagcataattcaacaatt 11329081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 56 - 207
Target Start/End: Complemental strand, 19261108 - 19260956
Alignment:
Q  56 actaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattg 154  Q
    ||||||||||| | ||||| | ||||||| | |||||||||||| ||||||||||||||||| |||  |  | || | | ||||||||||||| | ||||    
T  19261108 actaacaacaacttatttcataacaacaaattatgaatcatgcatacccaagccatgaattaacattcataacatcatttaacaacaacaacatctattg 19261009  T
Q  155 atcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    |||||||||| ||||| ||||||||||||||   | |||||||||||||||||    
T  19261008 atcatgaaacttatcacaattcatcaacaacttagtataattcaccaattgag 19260956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 54424018 - 54424142
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||| ||||||||||||||| |||||| |  |  | ||| | ||| ||||||| | |||||||||||||| ||||| |||||||||||    
T  54424018 aatcatgaatcatgcatacccaagccatgaataatcatccacaacgtcacttagcaataacaacatcaattgatcatgaaacttatcacaattcatcaac 54424117  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    |||   |||||||||||||||||||    
T  54424118 aacatagcataattcaccaattgag 54424142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 17139514 - 17139616
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||| ||||||||||||||||||||||||  | || ||| | ||||||||||| | |||||||||||| | ||||| |||||| ||||    
T  17139514 aatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaac 17139613  T
Q  183 aac 185  Q
    |||    
T  17139614 aac 17139616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 198
Target Start/End: Complemental strand, 12560477 - 12560362
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||| |||||||||| |||||| |||| |  | || ||| | ||||||||||| |||||||||||||| ||||||| |||||| ||||    
T  12560477 aatcatgaatcatgcatacccaagccaggaattaacatccacaacatcacttagcaacaacaacatccattgatcatgaatcatatcacaattcaacaac 12560378  T
Q  183 aaccatgcataattca 198  Q
    |||   ||||||||||    
T  12560377 aacatagcataattca 12560362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 51 - 185
Target Start/End: Complemental strand, 14528286 - 14528151
Alignment:
Q  51 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 149  Q
    ||||||| |||||||  ||||||||  ||||||| ||||||||||| || ||||||||||||||||| ||||||  | || ||| | ||||||||||| |    
T  14528286 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcattcatacccaagccatgaattaccatcaacaacatcacttagcaacaacaacatc 14528187  T
Q  150 cattgatcatgaaacatatcaaaattcatcaacaac 185  Q
     |||||||||||| | ||||| |||||| |||||||    
T  14528186 aattgatcatgaatcttatcacaattcaacaacaac 14528151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 9303425 - 9303343
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattca-tttcttgacaacaatcatg 89  Q
    ||||||||||| |||||||||||| |||||||||| |||||||||||||| |||||||| ||| |||||  ||||||||||||    
T  9303425 acatcatcaaaatcaaacttcttctttatcaacccgttttacaaaaccaccaacaacaactcattttctcaacaacaatcatg 9303343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 12349781 - 12349656
Alignment:
Q  87 atgaatcatgcaaac-----ccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaa 181  Q
    |||||||||||||||     ||||||||||| |||||||| |  | |||||  | ||||||||||| | |||||||||||||| ||||| |||||| |||    
T  12349781 atgaatcatgcaaaccatggccaagccatgatttatcatctacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaa 12349682  T
Q  182 caaccatgcataattcaccaattgag 207  Q
    |||| | |||||||||||||||||||    
T  12349681 caacaaagcataattcaccaattgag 12349656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 12488967 - 12488865
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||| ||| | ||||||||||||||||||||||||  | || ||| | ||||||||||| | |||||||||||| | ||||| |||||| ||||    
T  12488967 aatcatgaattatgaacacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaac 12488868  T
Q  183 aac 185  Q
    |||    
T  12488867 aac 12488865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 34439513 - 34439460
Alignment:
Q  154 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  34439513 gatcatgaaacttatcataattcatcaacaacaatgcataattcaccaattgag 34439460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 184
Target Start/End: Original strand, 17204667 - 17204807
Alignment:
Q  45 tttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaac 143  Q
    |||||||||||||||||||||| ||||||||   |||| |||||||||| ||  | ||||||||||||||| |||| |||  |||| ||| | |||||||    
T  17204667 tttacaaaaccactaacaacaactcatttctcatcaacaaatcatgaattataaacacccaagccatgaatcatcaacaacaatattacttagcaacaac 17204766  T
Q  144 aacaaccattgatcatgaaacatatcaaaattcatcaacaa 184  Q
    |||| ||||| | |||||  | ||||| |||||| ||||||    
T  17204767 aacatccattaaacatgattcctatcacaattcaacaacaa 17204807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 88 - 199
Target Start/End: Original strand, 8631801 - 8631912
Alignment:
Q  88 tgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacca 187  Q
    ||||||||||||||||||||||||||| ||||||||  | |||||  | ||||||||||| | |||  | ||||||| ||||| ||| || ||||||| |    
T  8631801 tgaatcatgcaaacccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatcaatttgttatgaaacttatcacaatccaacaacaacaa 8631900  T
Q  188 tgcataattcac 199  Q
     |||||||||||    
T  8631901 agcataattcac 8631912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 51 - 177
Target Start/End: Complemental strand, 55441123 - 55440996
Alignment:
Q  51 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 149  Q
    ||||||| |||||||  ||||||||  |||| || |||||||| ||||| ||||||| ||||||||||||||||  | || ||| | || |||||||| |    
T  55441123 aaaccaccaacaacatctcatttctcaacaaaaaatcatgaattatgcatacccaagtcatgaattatcatcaacaacatcacttagcatcaacaacatc 55441024  T
Q  150 cattgatcatgaaacatatcaaaattca 177  Q
     |||||||||||||| ||||| ||||||    
T  55441023 aattgatcatgaaacttatcacaattca 55440996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 14301074 - 14301196
Alignment:
Q  86 catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    ||||||||||||||||| ||| ||||||| ||||||||  | || ||| |  |||||||||| | |||||||||||| | ||||| |||||| |||||||    
T  14301074 catgaatcatgcaaaccaaagacatgaataatcatcaacaacatcacttagaaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaac 14301173  T
Q  186 catgcataattc-accaattgag 207  Q
       ||||||||| ||||||||||    
T  14301174 atagcataattcaaccaattgag 14301196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 123
Target Start/End: Complemental strand, 14059453 - 14059414
Alignment:
Q  84 atcatgaatcatgcaaacccaagccatgaattatcatcaa 123  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  14059453 atcatgaattatgcaaacccaagccatgaattatcatcaa 14059414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 17938582 - 17938701
Alignment:
Q  85 tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaa 184  Q
    |||||||||||| ||||||||||||||||| || |||||  | |||||  | ||||||||||| | |||||||||||||   | || ||| || ||||||    
T  17938582 tcatgaatcatgtaaacccaagccatgaatgattatcaacaacatgacatatcaacaacaacatcaattgatcatgaaaataaccacaatccaacaacaa 17938681  T
Q  185 ccatgcataattcaccaatt 204  Q
    | | |||||||||| |||||    
T  17938682 caaagcataattcatcaatt 17938701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 162
Target Start/End: Complemental strand, 38811297 - 38811170
Alignment:
Q  36 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 134  Q
    |||||||||||||||||  ||| |||||||| ||||||||   || |||  ||||||| ||||| ||||||||||||||| ||||||||  | || |||     
T  38811297 tcaacccattttacaaagtcaccaacaacaactcatttctgatcatcaaaacatgaattatgcacacccaagccatgaatcatcatcaacaacatcactt 38811198  T
Q  135 aacaacaacaacaaccattgatcatgaa 162  Q
    | ||||||||||| | ||||| ||||||    
T  38811197 agcaacaacaacatcaattgaacatgaa 38811170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 1990759 - 1990799
Alignment:
Q  35 atcaacccattttacaaaaccactaacaacaattcatttct 75  Q
    ||||||||||||||||||||||| |||||||| ||||||||    
T  1990759 atcaacccattttacaaaaccaccaacaacaactcatttct 1990799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 185
Target Start/End: Original strand, 16880131 - 16880231
Alignment:
Q  85 tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaa 184  Q
    |||||||| ||||| |||||||||||||||||||||| |  | || ||| | |||||| |||| | ||||| |||||| | ||||| |||||| ||||||    
T  16880131 tcatgaattatgcacacccaagccatgaattatcatccacaacatcacttagcaacaataacatcaattgaacatgaatcttatcacaattcaacaacaa 16880230  T
Q  185 c 185  Q
    |    
T  16880231 c 16880231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 17960602 - 17960520
Alignment:
Q  36 tcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattat 117  Q
    |||||||||||||||||  ||| |||||||| |||||||    |||| |||||||||| ||||| ||||||| ||||||||||    
T  17960602 tcaacccattttacaaagtcaccaacaacaactcatttcccatcaacaaatcatgaattatgcacacccaagtcatgaattat 17960520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 207
Target Start/End: Original strand, 28558271 - 28558301
Alignment:
Q  177 atcaacaaccatgcataattcaccaattgag 207  Q
    |||||||||||||||||||||||||||||||    
T  28558271 atcaacaaccatgcataattcaccaattgag 28558301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 133; Significance: 3e-69; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 9 - 207
Target Start/End: Original strand, 11583982 - 11584184
Alignment:
Q  9 catcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaa-cccaagc 107  Q
    ||||||||||  ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||||||| |||||||    
T  11583982 catcatcaaaaacaaacttcttcatcatcaacccattttacaaaaccacgaacaacaactcatttctcaacaacaatcatgaatcatgcaaaacccaagc 11584081  T
Q  108 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccat---gcataattcaccaatt 204  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |    ||||||||||||||||    
T  11584082 catgaattatcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcaacaacaacaacaaagcataattcaccaatt 11584181  T
Q  205 gag 207  Q
    |||    
T  11584182 gag 11584184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 51 - 213
Target Start/End: Original strand, 2031783 - 2031946
Alignment:
Q  51 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 149  Q
    ||||||| ||||||||| |||||||  ||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  2031783 aaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaatatgactaaacaacaacaacaac 2031882  T
Q  150 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  2031883 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 2031946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 30 - 213
Target Start/End: Original strand, 11342635 - 11342821
Alignment:
Q  30 tcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 127  Q
    |||| ||||||||||||| || ||  ||| ||||||||| |||||||  ||||||| ||||||||||||||||||||||||||  || ||||||||  ||    
T  11342635 tcataatcaacccattttcaccaagacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaat 11342734  T
Q  128 atgactaaacaa-caacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  11342735 atgactaaacaaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 11342821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 30 - 207
Target Start/End: Complemental strand, 1168500 - 1168321
Alignment:
Q  30 tcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 127  Q
    |||| ||||||||||||| |  ||| ||| |||||||  ||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||  |     
T  1168500 tcataatcaacccattttcatcaaaacaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaac 1168401  T
Q  128 atgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    |||||| | ||||||||||| | |||||||||||||| ||||| ||||||||||||||  ||||||||||||||||||||    
T  1168400 atgacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacattgcataattcaccaattgag 1168321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 21397098 - 21397222
Alignment:
Q  86 catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa---caacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||   ||||||| |||||||||||||| ||||| |||||||||||    
T  21397098 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaataacaacaacaattgatcatgaaacttatcacaattcatcaac 21397197  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| |||||||||||||||||||||    
T  21397198 aacaatgcataattcaccaattgag 21397222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 89 - 207
Target Start/End: Original strand, 28261533 - 28261651
Alignment:
Q  89 gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccat 188  Q
    |||| |||||||||||||||||||||||||||||   | |||||||||||||||||||||| ||||||||| |||||||||| |||| ||||||||| ||    
T  28261533 gaattatgcaaacccaagccatgaattatcatcagcaacatgactaaacaacaacaacaacaattgatcataaaacatatcacaatttatcaacaacaat 28261632  T
Q  189 gcataattcaccaattgag 207  Q
    |||||||||||||||||||    
T  28261633 gcataattcaccaattgag 28261651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 21204936 - 21205062
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| |||||||||||||||||  || ||  | || ||| ||||||||||||||  |||||||||||||||||||| |||||||||||||||    
T  21204936 atgaatcatgcatacccaagccatgaattagaataaataacatcacttaacaacaacaacaaatattgatcatgaaacatatcacaattcatcaacaacc 21205035  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  21205036 atgcataattcaccaattgagcataat 21205062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 206
Target Start/End: Complemental strand, 21646966 - 21646857
Alignment:
Q  97 caaacccaagccatgaattatcatcaaacat-atgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataat 195  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||| || ||||||    
T  21646966 caaacccaagccatgaattatcatcaa-catcatgactaaacaacaacagcaacaattgatcatgaaacatatcacaattcatcaacaacgatacataat 21646868  T
Q  196 tcaccaattga 206  Q
    |||||||||||    
T  21646867 tcaccaattga 21646857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 89 - 207
Target Start/End: Original strand, 24475595 - 24475708
Alignment:
Q  89 gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccat 188  Q
    |||| ||||||||||||||||||||||||||||||  | ||||||||||||||||||||   |||||||||||||||||  | |||||||||||||| ||    
T  24475595 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaaca---attgatcatgaaacata--acaattcatcaacaacaat 24475689  T
Q  189 gcataattcaccaattgag 207  Q
    |||||||||||||||||||    
T  24475690 gcataattcaccaattgag 24475708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 207
Target Start/End: Complemental strand, 11337451 - 11337303
Alignment:
Q  59 aacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 158  Q
    |||||||  ||||||||  ||||||||||||||||||| |||| |||||||||||||||||||||  | |||||| | ||||||||||| | ||||||||    
T  11337451 aacaacatctcatttctcaacaacaatcatgaatcatgtaaactcaagccatgaattatcatcaacgacatgacttagcaacaacaacatcaattgatca 11337352  T
Q  159 tgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    |||||| ||||| ||||||||||||||    ||||||||||||| ||||    
T  11337351 tgaaacttatcacaattcatcaacaacataacataattcaccaaatgag 11337303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 20712086 - 20712206
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| ||||||  | |||||| ||||||||||||| | |||||||||| ||| ||||| ||||||||||||||     
T  20712086 atgaatcatgcatacccaagccatgaattaacatcaacaacatgacttaacaacaacaacatcaattgatcatgcaacttatcacaattcatcaacaaca 20712185  T
Q  187 atgcataattcaccaattgag 207  Q
    | |||||||||||||||||||    
T  20712186 aagcataattcaccaattgag 20712206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 207
Target Start/End: Original strand, 4865274 - 4865393
Alignment:
Q  89 gaatcatgcaaacccaagccatgaa-ttatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacca 187  Q
    |||| |||||||||||||||||||| ||||||||||  | |||| |||||||| | |||||| |||||||||||||||||||| ||||||||||| || |    
T  4865274 gaattatgcaaacccaagccatgaaattatcatcaacaacatgaataaacaaccataacaacaattgatcatgaaacatatcacaattcatcaaccacaa 4865373  T
Q  188 tgcataattcaccaattgag 207  Q
    ||||||||||||||||||||    
T  4865374 tgcataattcaccaattgag 4865393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 21650705 - 21650831
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| |||||| |||||||||| |||  |  | || ||| ||||||||||||| | |||||||||||||| ||||| |||||| ||||||||    
T  21650705 atgaatcatgcatacccaaaccatgaattagcattcataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcaacaacaacc 21650804  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  21650805 atgcataattcaccaattgagcataat 21650831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 21906729 - 21906846
Alignment:
Q  86 catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||| |||||||||| ||   |||||||||||||| ||||| ||||||||||||||    
T  21906729 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacatca---attgatcatgaaacttatcacaattcatcaacaac 21906825  T
Q  186 catgcataattcaccaattga 206  Q
       |||||||||| |||||||    
T  21906826 atagcataattcatcaattga 21906846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 24183370 - 24183249
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||||||||||||||| |||||||||||   | |||||  | |||||||| || | ||||||||||||||  |||| |||||| ||||    
T  24183370 aatcatgaatcatgcaaacccaagccattaattatcatca---acatgacatatcaacaacaccatcaattgatcatgaaactcatcacaattcaacaac 24183274  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| | |||||||||||||||||||    
T  24183273 aacaaagcataattcaccaattgag 24183249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 16105573 - 16105656
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattca-tttcttgacaacaatcatga 90  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||| ||| |||||  |||||||||||||    
T  16105573 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatga 16105656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 109158 - 109075
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattca-tttcttgacaacaatcatga 90  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||||| ||| |||||  |||||||||||||    
T  109158 acatcatcaaaatcaaacttcttctctatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatga 109075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 198
Target Start/End: Original strand, 19405503 - 19405658
Alignment:
Q  44 ttttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 142  Q
    |||||| ||| ||| |||||||  ||||||||  ||||||| |||||||||||||| ||||||||||||||||||||||||  | || ||  | ||  ||    
T  19405503 ttttaccaaaacaccaacaacatctcatttctccacaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacataccagtaa 19405602  T
Q  143 caacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattca 198  Q
    ||| | | |||||||||||||| ||||| |||||| ||||||| |  |||||||||    
T  19405603 caatatcaattgatcatgaaacttatcacaattcaacaacaacgaatcataattca 19405658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 83 - 177
Target Start/End: Original strand, 23466463 - 23466557
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacat-atgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattca 177  Q
    |||||||||||||||| |||||||||||||| ||||||| ||||| || ||| | ||||||||||| | |||||||||||||| ||||| ||||||    
T  23466463 aatcatgaatcatgcatacccaagccatgaactatcatc-aacatcatcacttagcaacaacaacatcaattgatcatgaaacttatcacaattca 23466557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 204
Target Start/End: Original strand, 7728378 - 7728547
Alignment:
Q  36 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 134  Q
    |||||||||||| ||||  ||| |||||||  |||| |||   ||||||| ||||||| ||||| |||||||| || ||||||||||||  | || |||     
T  7728378 tcaacccatttttcaaagtcaccaacaacacctcatctctcaccaacaattcatgaattatgcacacccaagcgataaattatcatcaacaacatcactt 7728477  T
Q  135 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 204  Q
    | ||||||||||| | ||||| |||||| | ||||| |||||| |||||||   |||||||||| |||||    
T  7728478 agcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattcaacaatt 7728547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 3673885 - 3673989
Alignment:
Q  100 acccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcac 199  Q
    ||||||||||||||| |||||||| ||  |  || | ||||||||||| | |||||||||||||| ||||| |||||| |||||||   ||||||||||     
T  3673885 acccaagccatgaatcatcatcaaccacctcgcttagcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacatagcataattcaa 3673984  T
Q  200 caatt 204  Q
    |||||    
T  3673985 caatt 3673989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 23493925 - 23494040
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||| ||| | ||||||||||||||| ||||||||  | || ||| | ||||||||||| | ||||| |||||| | ||||| |||||| ||||    
T  23493925 aatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaac 23494024  T
Q  183 aaccatgcataattca 198  Q
    |||   ||||||||||    
T  23494025 aacatagcataattca 23494040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 24225634 - 24225596
Alignment:
Q  9 catcatcaaattcaaacttcttcattatcaacccatttt 47  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  24225634 catcatcaaaatcaaacttcttcattatcaacccatttt 24225596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 16595474 - 16595550
Alignment:
Q  44 ttttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatca 119  Q
    |||||| |||| || |||||||  ||||||||   ||||||| ||||||||||||| ||||||| ||||||||||||    
T  16595474 ttttaccaaactaccaacaacatctcatttctcatcaacaattcatgaatcatgcacacccaagtcatgaattatca 16595550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 32966436 - 32966352
Alignment:
Q  36 tcaacccattttacaaaaccactaacaacaattcatttcttgacaa-caatcatgaatcatgcaaacccaagccatgaattatca 119  Q
    |||||||||||||||||  ||| |||||||| ||||||||   ||| |||| |||||| |||||  | |||||||||||||||||    
T  32966436 tcaacccattttacaaagtcaccaacaacaactcatttctcatcaaccaattatgaattatgcacgctcaagccatgaattatca 32966352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 6e-64; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 51 - 213
Target Start/End: Complemental strand, 41507091 - 41506928
Alignment:
Q  51 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 149  Q
    ||||||| ||||||||| |||||||  ||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  41507091 aaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaatatgactaaacaacaacaacaac 41506992  T
Q  150 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  41506991 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 41506928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 24717152 - 24716981
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    ||||||||||||||| ||||||||| ||||| |  ||||||| | ||||||||||||||||||||||||| || ||||||||  ||||||||||||| ||    
T  24717152 attttacaaaaccaccaacaacaatccatttatcaacaacaaattatgaatcatgcaaacccaagccatgtatcatcatcaacaatatgactaaacatca 24717053  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||    
T  24717052 acaacaaccattgaacatgaaacaaatcacaattcatcaacaaccatgcataattcaccaattgagcataat 24716981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 39115285 - 39115411
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| || |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||     
T  39115285 atgaatcatgcatacacaagtcatgaattatcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcacgattcatcaacaact 39115384  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  39115385 atgcataattcaccaattgagcataat 39115411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 89 - 207
Target Start/End: Complemental strand, 22235038 - 22234920
Alignment:
Q  89 gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccat 188  Q
    |||| |||||||||||| |||||||||||||||||  | |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||    
T  22235038 gaattatgcaaacccaatccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaat 22234939  T
Q  189 gcataattcaccaattgag 207  Q
    |||||||||||||||||||    
T  22234938 gcataattcaccaattgag 22234920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 59 - 204
Target Start/End: Original strand, 41246639 - 41246785
Alignment:
Q  59 aacaacaattcatttcttgacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    ||||||| |||||||||  ||||||| | |||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||| | |||||||    
T  41246639 aacaacatttcatttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaattgatc 41246738  T
Q  158 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 204  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  41246739 atgaaacttatcacaattcatcaacaacaatgcataattcaccaatt 41246785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 207
Target Start/End: Complemental strand, 19993320 - 19993171
Alignment:
Q  59 aacaacaattcatttcttgacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    |||||||  ||||||||  ||||||||| | |||| |||||||||| |||||||||||||||||||  | |||||||||||||||||||||| ||||||     
T  19993320 aacaacatctcatttctcaacaacaatccaagaattatgcaaaccctagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatg 19993221  T
Q  158 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    ||||||  ||||| |||||||||||||| |||||||||||||||||||||    
T  19993220 atgaaatttatcacaattcatcaacaacaatgcataattcaccaattgag 19993171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 37611675 - 37611798
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||| |||||| ||||||||||||||||||||||| || |||||| ||||||||||||||| |||||||||||||| | ||| |||||||||||    
T  37611675 aatcatgaattatgcaa-cccaagccatgaattatcatcaaccacatgacttaacaacaacaacaacaattgatcatgaaacttttcacaattcatcaac 37611773  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| | |||||||||||||||||||    
T  37611774 aacaaagcataattcaccaattgag 37611798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 20573433 - 20573309
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||||||||||||||||||||||||||||  | |||||  | ||||||||||| | |||||||||||||| ||||| |||||| ||||    
T  20573433 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaac 20573334  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| | | |||||||||||||||||    
T  20573333 aacaaaggataattcaccaattgag 20573309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 20481615 - 20481735
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| ||||||  | |||||| ||||||||||||| | |||||||||| ||| ||||| ||||||||||||||     
T  20481615 atgaatcatgcatacccaagccatgaattaacatcaacaacatgacttaacaacaacaacatcaattgatcatgcaacttatcacaattcatcaacaaca 20481714  T
Q  187 atgcataattcaccaattgag 207  Q
    | | |||||||||||||||||    
T  20481715 aagtataattcaccaattgag 20481735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 274453 - 274572
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||| ||||||| ||||||||||||||||| |||| |  | || ||| ||||| ||||||| | |||||||||||||| ||||| |||||||||||||||    
T  274453 atgattcatgcatacccaagccatgaattagcatccataacatcacttaacaataacaacatctattgatcatgaaacttatcacaattcatcaacaacc 274552  T
Q  187 atgcataattcaccaattga 206  Q
    ||||||||||||||||||||    
T  274553 atgcataattcaccaattga 274572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 641396 - 641277
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||| ||||||| ||||||||||||||||| |||| |  | || ||| ||||| ||||||| | |||||||||||||| ||||| |||||||||||||||    
T  641396 atgattcatgcatacccaagccatgaattagcatccataacatcacttaacaataacaacatctattgatcatgaaacttatcacaattcatcaacaacc 641297  T
Q  187 atgcataattcaccaattga 206  Q
    ||||||||||||||||||||    
T  641296 atgcataattcaccaattga 641277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 827202 - 827083
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||| ||||||| ||||||||||||||||| |||| |  | || ||| ||||| ||||||| | |||||||||||||| ||||| |||||||||||||||    
T  827202 atgattcatgcatacccaagccatgaattagcatccataacatcacttaacaataacaacatctattgatcatgaaacttatcacaattcatcaacaacc 827103  T
Q  187 atgcataattcaccaattga 206  Q
    ||||||||||||||||||||    
T  827102 atgcataattcaccaattga 827083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 16039126 - 16039000
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| | ||||||||| ||||| |||| |  | || ||| ||||||||||||| | |||||||||||||| ||||| |||||||||||||||    
T  16039126 atgaatcatgcatatccaagccataaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacc 16039027  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||| ||||||| |||||    
T  16039026 atgcataattcactaattgagcataat 16039000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 20648070 - 20647949
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    ||||||||||||||||||||||||||||| |||| ||||||  | |||||  | ||||||| ||| | |||||||||||||| ||||| |||||||||||    
T  20648070 aatcatgaatcatgcaaacccaagccatggattaacatcaacaacatgacctagcaacaacgacatcaattgatcatgaaacttatcacaattcatcaac 20647971  T
Q  183 aaccatgcataattcaccaatt 204  Q
    |||   ||||||||||||||||    
T  20647970 aacatagcataattcaccaatt 20647949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 20654146 - 20654025
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    ||||||||||||||||||||||||| |||||||| ||||||  | |||||  | ||||||| ||| | |||||||||||||| ||||| |||||||||||    
T  20654146 aatcatgaatcatgcaaacccaagcaatgaattaacatcaacaacatgacctagcaacaacgacatcaattgatcatgaaacttatcacaattcatcaac 20654047  T
Q  183 aaccatgcataattcaccaatt 204  Q
    |||   ||||||||||||||||    
T  20654046 aacttagcataattcaccaatt 20654025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 25122543 - 25122618
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcat 159  Q
    ||||||||||||||||| |||||||||||||||||||||||  | |||||||||||||||||||| | |||||||||    
T  25122543 aatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgactaaacaacaacaacatctattgatcat 25122618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 198
Target Start/End: Complemental strand, 39447046 - 39446892
Alignment:
Q  44 ttttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 142  Q
    |||||| |||| || |||||||  ||||||||  ||||||| |||| ||||||||| |||||||||||||||||| |||||  | || ||| | ||||||    
T  39447046 ttttaccaaactaccaacaacatctcatttctcaacaacaaatcat-aatcatgcatacccaagccatgaattattatcaacaacatcacttagcaacaa 39446948  T
Q  143 caacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattca 198  Q
    ||||| | |||||||||||| | ||||| |||||| |||||||   ||||||||||    
T  39446947 caacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattca 39446892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 196
Target Start/End: Original strand, 21681008 - 21681121
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||| ||||||||||||||||||||||||  | || ||  | ||  ||||||| | ||||||||||||||  |||| |||||| ||||    
T  21681008 aatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacataccagtaacaacatcaattgatcatgaaactaatcacaattcaacaac 21681107  T
Q  183 aaccatgcataatt 196  Q
    ||| | ||||||||    
T  21681108 aacaaagcataatt 21681121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 20567240 - 20567200
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaa 123  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20567240 aatcatgaatcatgcaaacccaagccatgaattatcatcaa 20567200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 20567399 - 20567335
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaaca 147  Q
    |||||||||||||||||||||||||||||||||||||||||  | |||||  | |||||||||||    
T  20567399 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaaca 20567335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 20573592 - 20573528
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaaca 147  Q
    |||||||||||||||||||||||||||||||||||||||||  | |||||  | |||||||||||    
T  20573592 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaaca 20573528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 29759893 - 29760005
Alignment:
Q  30 tcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 127  Q
    |||| ||||||||||||  || ||| ||| ||||||||  |||||||  ||||||| ||||||||||||||||||||||||||  || ||||||||  ||    
T  29759893 tcataatcaacccatttacaccaaaacaccaacaacaaaccatttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaat 29759992  T
Q  128 atgactaaacaac 140  Q
    |||||||||||||    
T  29759993 atgactaaacaac 29760005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 198
Target Start/End: Original strand, 38533607 - 38533770
Alignment:
Q  36 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 134  Q
    |||||||||||||||||  | | |||||||  ||||||||   |||||| |||||||| ||||| ||||||||||||||||||||||||  | || ||      
T  38533607 tcaacccattttacaaagtctccaacaacatctcatttctcatcaacaaatcatgaattatgcacacccaagccatgaattatcatcaacaacatcacct 38533706  T
Q  135 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattca 198  Q
    | ||||||||||| | ||||| |||||| |  |||| |||||| |||||||   ||||||||||    
T  38533707 agcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagcataattca 38533770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 5854572 - 5854722
Alignment:
Q  36 tcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 134  Q
    |||||||||||||||||||||  |||||||| ||| ||||   || | |||||||| | ||| | ||||||||||||||| |||| |||  |||| |||     
T  5854572 tcaacccattttacaaaaccaacaacaacaactcaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 5854671  T
Q  135 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    | ||||||||||| | ||||| |||||| |  |||| |||||| |||||||    
T  5854672 agcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaac 5854722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 24385988 - 24385871
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||         || | ||||||||||||||     
T  24385988 atgaatcatgcatacccaagccatgaattagcatccataaaatcacttaacaacaacaacatctattgatc---------attacaattcatcaacaaca 24385898  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    |||| |||||||||||||||| |||||    
T  24385897 atgcttaattcaccaattgagcataat 24385871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 20561804 - 20561751
Alignment:
Q  151 attgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 204  Q
    |||||||||||||| ||||| ||||||||||||||   ||||||||||||||||    
T  20561804 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaatt 20561751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 22736127 - 22736046
Alignment:
Q  36 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaatta 116  Q
    |||||||||||||||||  ||| |||||||| |||||| |   ||||||| ||||||| ||||| |||||||||||||||||    
T  22736127 tcaacccattttacaaagtcaccaacaacaactcatttttcatcaacaattcatgaattatgcacacccaagccatgaatta 22736046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 15969800 - 15969860
Alignment:
Q  59 aacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatca 119  Q
    |||||||| ||||||||   | |||||||||||| ||||| ||||||||||||||||||||    
T  15969800 aacaacaactcatttctcctctacaatcatgaattatgcacacccaagccatgaattatca 15969860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 204
Target Start/End: Original strand, 23837163 - 23837325
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| | |||||| ||||||||   |||||| |||||||| ||| | ||||||||||||||| |||| |||  | || ||| | |||||    
T  23837163 atttcacaaaaccaccaccaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaaca 23837262  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 204  Q
    |||||| | ||||| |||||  | || || |||||| |||||||   |||||||||| |||||    
T  23837263 acaacatcaattgaacatgactcttaccacaattcaacaacaacatagcataattcaacaatt 23837325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 23226317 - 23226240
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatg 160  Q
    |||||||||| ||| | ||||||||||||||| |||| |||  |||| ||| ||||||||||||| | ||||| ||||    
T  23226317 aatcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttaacaacaacaacatcaattgaacatg 23226240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 21442 - 21642
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaag 106  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||| |||||||||||||||||||||    
T  21442 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttcttaacaacaattcatgaatcatgcaaacccaag 21541  T
Q  107 ccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattga 206  Q
    |||||||||||||||||  | |||||| | ||||||||||| | | | |||||||||| ||||| ||||||||||||||   ||||||||||||||||||    
T  21542 ccatgaattatcatcaacaacatgacttagcaacaacaacatcaaataatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattga 21641  T
Q  207 g 207  Q
    |    
T  21642 g 21642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 31141 - 31341
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaag 106  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||| |||||||||||||||||||||    
T  31141 acatcatcaaaatcaaactttttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaattcatgaatcatgcaaacccaag 31240  T
Q  107 ccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattga 206  Q
    |||||||||||||||||  | |||||| | |||||| |||| | |||||| ||||||| ||||| ||||||||||||||   | |||||| |||||||||    
T  31241 ccatgaattatcatcaacaacatgacttagcaacaaaaacatcaattgataatgaaacttatcacaattcatcaacaacatagtataatttaccaattga 31340  T
Q  207 g 207  Q
    |    
T  31341 g 31341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 75 - 274
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagc 107  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||| ||||||||   |||||||||||||||||||||||||||||    
T  75 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaacaacaacaactcatttctcagcaacaatcatgaatcatgcaaacccaagc 174  T
Q  108 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    ||||||||||||||||  | |||||  | ||||||||||| | |||||||||||||| ||||| |||||| ||||||| | |||||||||||||||||||    
T  175 catgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgag 274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 1e-61; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 35015447 - 35015276
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| ||||||||||||||||||||||||||| || ||||||||  ||||||||||||||||    
T  35015447 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatgtatcatcatcaacaatatgactaaacaaca 35015348  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  35015347 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 35015276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 8 - 213
Target Start/End: Original strand, 18583264 - 18583453
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagc 107  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  18583264 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 18583363  T
Q  108 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    |||||||||||||                ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18583364 catgaattatcat----------------caacaacaacatcaattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 18583447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 43 - 207
Target Start/End: Complemental strand, 19983581 - 19983416
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| | ||||||||||||||||||||||||| || ||||||||  ||||||||||||||||    
T  19983581 atttcacaaaaccaccaacaacaatccatttctcaacaacaaaccatgaatcatgcaaacccaagccatgtatcatcatcaacaatatgactaaacaaca 19983482  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    |||||||||| | | |||||||||||||| ||||||||||||| |||||||||||||| |||||||    
T  19983481 acaacaaccactaaccatgaaacatatcacaattcatcaacaatcatgcataattcactaattgag 19983416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 25744448 - 25744331
Alignment:
Q  89 gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccat 188  Q
    |||| ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||| ||    
T  25744448 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacatttgatcatgaaacatatcacaattcatcaacaacaat 25744349  T
Q  189 gcataattcaccaattga 206  Q
    ||||||||||||| ||||    
T  25744348 gcataattcaccacttga 25744331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 18823712 - 18823573
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagc 107  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||||||| | |||||| ||||||||  ||||||||||||||||||||||||||||||    
T  18823712 acatcatcaaaatcaaacttcttctttatcaagccattttacaaaaccaccaccaacaactcatttctccacaacaatcatgaatcatgcaaacccaagc 18823613  T
Q  108 catgaattatcatcaaacatatgactaaacaacaacaaca 147  Q
    |||| |||||||||||  | |||||  | |||||||||||    
T  18823612 catggattatcatcaacaacatgacatatcaacaacaaca 18823573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 32898799 - 32898920
Alignment:
Q  86 catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    ||||||||||||||||||||||||| ||||||||||||  | |||||||||||||||||||  | |||||||||||||| ||||| |||||||||||||     
T  32898799 catgaatcatgcaaacccaagccattaattatcatcaacaacatgactaaacaacaacaacttcaattgatcatgaaacttatcacaattcatcaacaat 32898898  T
Q  186 catgcataattcaccaattgag 207  Q
     |||||||||||||||||||||    
T  32898899 aatgcataattcaccaattgag 32898920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 22440941 - 22441064
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    ||||||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||||| |||||||||||||| ||||| || |||| |||    
T  22440941 aatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgacttaacaacaacaacaacaattgatcatgaaacttatcacaaatcatgaac 22441039  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| |||||||||||||||||||||    
T  22441040 aacaatgcataattcaccaattgag 22441064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 18839567 - 18839428
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagc 107  Q
    ||||||||||| |||||||||||| || ||||| |||||||||||||||| | |||||| ||||||||  ||||||||||||||||||||||||||||||    
T  18839567 acatcatcaaaatcaaacttcttctttttcaactcattttacaaaaccaccaccaacaactcatttctccacaacaatcatgaatcatgcaaacccaagc 18839468  T
Q  108 catgaattatcatcaaacatatgactaaacaacaacaaca 147  Q
    |||| |||||||||||  | |||||  | |||||||||||    
T  18839467 catggattatcatcaacaacatgacatatcaacaacaaca 18839428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 26089736 - 26089871
Alignment:
Q  78 acaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattca 177  Q
    |||||||| |||||||||||| |||||| |||||||||| |||| |  | || ||| ||||||||||||| | |||||||||||||| ||||| ||||||    
T  26089736 acaacaattatgaatcatgcatacccaaaccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattca 26089835  T
Q  178 tcaacaaccatgcataattcaccaattgagtataat 213  Q
    |||||||||||||||||||||||||||||| |||||    
T  26089836 tcaacaaccatgcataattcaccaattgagcataat 26089871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 23994933 - 23995059
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||  |  | || ||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||    
T  23994933 atgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 23995032  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  23995033 atgcataattcaccaattgagcataat 23995059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 18002750 - 18002615
Alignment:
Q  78 acaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattca 177  Q
    |||||||  |||||||||||| ||||||||||||||||| |||| |  |  | ||| ||||||||||||| | |||||||||||||||||||| ||||||    
T  18002750 acaacaagtatgaatcatgcatacccaagccatgaattagcatccataacgtcacttaacaacaacaacatctattgatcatgaaacatatcacaattca 18002651  T
Q  178 tcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||||| |||||    
T  18002650 tcaacaaccatgcataattcatcaattgagcataat 18002615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 59 - 204
Target Start/End: Original strand, 31628249 - 31628395
Alignment:
Q  59 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    |||||||  ||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||  | |||||  | ||||||||||| | |||||||    
T  31628249 aacaacatctcatttctccacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatc 31628348  T
Q  158 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 204  Q
    ||||||| ||||| |||||| ||||||| | ||||||||||||||||    
T  31628349 atgaaacttatcacaattcaacaacaacaaagcataattcaccaatt 31628395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 15742468 - 15742339
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa---ccattgatcatgaaacatatcaaaattcatcaaca 183  Q
    |||||||||||| ||||||||||||||||| |||  |  | || ||| ||||||||||||||   | |||||||||||||||||||| ||||||||||||    
T  15742468 atgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacaacatctattgatcatgaaacatatcacaattcatcaaca 15742369  T
Q  184 accatgcataattcaccaattgagtataat 213  Q
    |||||||||||||||||||||||| |||||    
T  15742368 accatgcataattcaccaattgagcataat 15742339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 13014949 - 13014826
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    ||||| ||||||||||| ||||||||| |||||||||||||  | |||||| |||| || ||||||| ||||||| |||||| ||||| |||||||||||    
T  13014949 aatcaagaatcatgcaa-cccaagccacgaattatcatcaacaacatgacttaacatcagcaacaacaattgatcttgaaacttatcacaattcatcaac 13014851  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| |||||||||||||||||||||    
T  13014850 aacaatgcataattcaccaattgag 13014826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 18777156 - 18777275
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||||||||  ||||||||||||||| ||||| ||||||||||||||     
T  18777156 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacattcattgatcatgaaacttatcacaattcatcaacaaca 18777255  T
Q  187 atgcataattcaccaattga 206  Q
      ||||||||||||||||||    
T  18777256 tagcataattcaccaattga 18777275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 90 - 204
Target Start/End: Original strand, 18432656 - 18432770
Alignment:
Q  90 aatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatg 189  Q
    ||||||||||||||||||||||||||||||||||  | || ||  | |||||||| || | |||||||||||||| ||||| |||||| ||||||| | |    
T  18432656 aatcatgcaaacccaagccatgaattatcatcaacaacataacatatcaacaacatcatcaattgatcatgaaacttatcacaattcaacaacaacaaag 18432755  T
Q  190 cataattcaccaatt 204  Q
    |||||||||||||||    
T  18432756 cataattcaccaatt 18432770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 204
Target Start/End: Original strand, 16086023 - 16086144
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||||||||||| ||||||||||||| ||  | |||||  | ||||||||||| | | |||||||||||| ||||| |||||| ||||    
T  16086023 aatcatgaatcatgcaaacccaagtcatgaattatcattaacaacatgacatatcaacaacaacatcaaatgatcatgaaacttatcataattcaacaac 16086122  T
Q  183 aaccatgcataattcaccaatt 204  Q
    ||| | | ||||||||||||||    
T  16086123 aacaaggtataattcaccaatt 16086144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 4991002 - 4991085
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattca-tttcttgacaacaatcatga 90  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||| ||| |||||  |||||||||||||    
T  4991002 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatga 4991085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 204
Target Start/End: Original strand, 18398890 - 18399065
Alignment:
Q  30 tcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacata 128  Q
    |||| ||||||||||||| |||||||||  |||||||| |||||||||  ||  | |||||||| ||||| ||||||||||||||||||||||||  | |    
T  18398890 tcataatcaacccatttttacaaaaccaacaacaacaactcatttcttatcacaattcatgaattatgcacacccaagccatgaattatcatcaacaaca 18398989  T
Q  129 tgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 204  Q
    | ||| | ||||||||||| | ||||| |||||| |  |||| |||||| |||||||   |||||||||| |||||    
T  18398990 tcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagcataattcaacaatt 18399065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 18570289 - 18570409
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||| ||||||||||| |||| |  | || ||| ||||||||| ||  | |||||||||||||| ||||| ||||||||||||||     
T  18570289 atgaatcatgcatacccaggccatgaattagcatccataacatcacttaacaacaactacttctattgatcatgaaacttatcacaattcatcaacaaca 18570388  T
Q  187 atgcataattcaccaattgag 207  Q
      |||||||||||||||||||    
T  18570389 tagcataattcaccaattgag 18570409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 204
Target Start/End: Complemental strand, 18381965 - 18381803
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| |||||||| ||||||||   |||||| |||||||| ||| | ||||||||||||||| |||| |||  | || ||| | |||||    
T  18381965 atttcacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaaca 18381866  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 204  Q
    |||||| | ||||| |||||  | ||||| |||||| ||||||| | |||||||||| |||||    
T  18381865 acaacatcaattgaacatgactcttatcacaattcaacaacaacaaagcataattcaacaatt 18381803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 17083496 - 17083383
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaa 105  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||  |||||||| ||||||||   || | |||||||| | ||| | ||||||    
T  17083496 acatcatcaaaatcaaacttcttcattatcaacccattttcacaaaaacaacaacaacaactcatttctaatcatcaaatcatgatttatgaacacccaa 17083397  T
Q  106 gccatgaattatca 119  Q
    ||||||||| ||||    
T  17083396 gccatgaatcatca 17083383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 185
Target Start/End: Complemental strand, 25367511 - 25367376
Alignment:
Q  51 aaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 149  Q
    |||| ||||||||||  ||||||||   ||||||| ||||||||||||| |||||||||||||||||||   ||  | || ||| | ||||||||||| |    
T  25367511 aaactactaacaacatctcatttctcatcaacaattcatgaatcatgcacacccaagccatgaattatcgataacaacatcacttagcaacaacaacatc 25367412  T
Q  150 cattgatcatgaaacatatcaaaattcatcaacaac 185  Q
     ||||| |||||| | ||||| |||||| |||||||    
T  25367411 aattgaacatgaatcttatcacaattcaacaacaac 25367376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 204
Target Start/End: Original strand, 16106527 - 16106643
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    ||||||||||||||||||     | ||||||||||||| ||  | |||||  | ||||||||||| | | |||||||||||| ||||| |||||| ||||    
T  16106527 aatcatgaatcatgcaaa-----gtcatgaattatcattaacaacatgacatatcaacaacaacatcaaatgatcatgaaacttatcacaattcaacaac 16106621  T
Q  183 aaccatgcataattcaccaatt 204  Q
    ||| | | ||||||||||||||    
T  16106622 aacaaggtataattcaccaatt 16106643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 204
Target Start/End: Complemental strand, 22362054 - 22361885
Alignment:
Q  36 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 134  Q
    ||||||||||||||||||| |  |||||||| ||| ||||   || |||| ||||||| ||| | ||||||||||||||| |||| |||  |||| |||     
T  22362054 tcaacccattttacaaaactaacaacaacaactcaattctcatcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcactt 22361955  T
Q  135 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 204  Q
    | ||||||||||| | ||||| ||||||    |||| |||||| |||||||   |||||||||| |||||    
T  22361954 agcaacaacaacatcaattgaacatgaatttcatcacaattcaacaacaacatagcataattcatcaatt 22361885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 28195324 - 28195259
Alignment:
Q  94 atgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcat 159  Q
    |||||||| |||||||||||||||||||||  | || ||| | ||||||| ||||| |||||||||    
T  28195324 atgcaaactcaagccatgaattatcatcaacaacatcacttagcaacaaccacaacaattgatcat 28195259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 8 - 185
Target Start/End: Original strand, 3230 - 3407
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagc 107  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  3230 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 3329  T
Q  108 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    ||||||||||||||||  | |||||  | ||||||||||| | |||||||||||||| ||||| ||||||||||||||    
T  3330 catgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaac 3407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 1e-58; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 59 - 213
Target Start/End: Complemental strand, 111542 - 111388
Alignment:
Q  59 aacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 158  Q
    |||||||||| ||||||  |||||||   ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  111542 aacaacaatttatttctcaacaacaaatttgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaacaacaacaaccattgatca 111443  T
Q  159 tgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  111442 tgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 111388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 30 - 213
Target Start/End: Original strand, 126366 - 126551
Alignment:
Q  30 tcattatcaacccatttta-caaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 127  Q
    |||| |||||||||||||  | ||| ||| ||||||||| |||||||  ||||||| ||||||||||||||||||||||||||| || ||||||||   |    
T  126366 tcataatcaacccattttctccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatgtatcatcatcaacagt 126465  T
Q  128 atgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  126466 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 126551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 39 - 213
Target Start/End: Complemental strand, 32494341 - 32494165
Alignment:
Q  39 acccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 136  Q
    ||||||||| || ||||||  |||||||||| ||||||  ||||||| | |||||||||||| || ||||||||||||||||||||| ||||||||||||    
T  32494341 acccattttcaccaaaccaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacacaagccatgaattatcatcaatcatatgactaaa 32494242  T
Q  137 caacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  32494241 caacaacaacaaccattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 32494165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 7284376 - 7284180
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagc 107  Q
    ||||| ||||| |||||||||| |||||||||||||||| |||||||||| |||||||| ||||||||  |||||||||||||||||||||||| |||||    
T  7284376 acatcgtcaaaatcaaacttctccattatcaacccatttaacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaactcaagc 7284277  T
Q  108 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 204  Q
    |||||||||| |||||  | |||||  | ||||||||||| | |||||||||||||| ||||| |||||| ||||||| | | ||||||||||||||    
T  7284276 catgaattattatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaaggataattcaccaatt 7284180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 59 - 207
Target Start/End: Complemental strand, 39046889 - 39046740
Alignment:
Q  59 aacaacaattcatttcttgacaaca-atcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    |||||||  ||||||||  |||||| |||| |||| ||||||||||||||||||||||||||||||  | |||||||||||||||||||||| |||||||    
T  39046889 aacaacatctcatttctcaacaacagatcaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatc 39046790  T
Q  158 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  39046789 atgaaacatatcacaattcatcaacaacaatgcataattcaccaattgag 39046740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 42056534 - 42056408
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||  |  |||| ||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||    
T  42056534 atgaatcatgcatacccaagccatgaattagcattcataatatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 42056435  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  42056434 atgcataattcaccaattgagcataat 42056408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 207
Target Start/End: Original strand, 11287390 - 11287547
Alignment:
Q  51 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 149  Q
    ||||||| |||||||  ||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||  | |||||| | ||||||||||| |    
T  11287390 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacaacatc 11287489  T
Q  150 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
     | |||||||||||| ||||| ||||||||||||||   |||||||||||||||||||    
T  11287490 aactgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgag 11287547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 2190431 - 2190305
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||| ||||| | |||||||||||||||||||| |||||||||||||||    
T  2190431 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacatcaacatctattgatcatgaaacatatcacaattcatcaacaacc 2190332  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  2190331 atgcataattcaccaattgagcataat 2190305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 207
Target Start/End: Original strand, 35094798 - 35094946
Alignment:
Q  59 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    |||||||  ||||||||  ||||||| ||| |||| ||||||||||||||||||| ||||||||||  | ||||||||||||||||| ||| ||||||||    
T  35094798 aacaacatctcatttctcaacaacaaatcaagaattatgcaaacccaagccatgatttatcatcaacaacatgactaaacaacaacagcaa-cattgatc 35094896  T
Q  158 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    ||||||||| | | ||||||||||||||  ||||||||||||||||||||    
T  35094897 atgaaacatttaacaattcatcaacaacagtgcataattcaccaattgag 35094946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 12758993 - 12759117
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||| |||| ||||||||||||||||||||||||| |||  | |||||| ||||||||||||||| |||||||||||||| ||||| |||||| ||||    
T  12758993 aatcataaatcctgcaaacccaagccatgaattatcaccaacaacatgacttaacaacaacaacaacaattgatcatgaaacttatcataattcaccaac 12759092  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    |||   |||||||||||||||||||    
T  12759093 aacatagcataattcaccaattgag 12759117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 2028931 - 2029057
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||| ||||||||| |||| |  | || ||| |||||| |||||| | |||||||||||||| ||||| ||||||||||||| |    
T  2028931 atgaatcatgcatacccaagtcatgaattagcatccataacatcacttaacaacgacaacatctattgatcatgaaacttatcacaattcatcaacaatc 2029030  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  2029031 atgcataattcaccaattgagcataat 2029057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 3049593 - 3049719
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||||||||| ||||| ||||||||||||||     
T  3049593 atgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaaca 3049692  T
Q  187 atgcataattcaccaattgagtataat 213  Q
      ||||||||||||||||||| |||||    
T  3049693 tagcataattcaccaattgagcataat 3049719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 15822669 - 15822548
Alignment:
Q  86 catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    ||||||||||||||||||||||||||||| ||||||||  | |||||  | ||||||||||| | |||||||||||||| ||||| |||||| |||||||    
T  15822669 catgaatcatgcaaacccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaac 15822570  T
Q  186 catgcataattcaccaattgag 207  Q
     | ||||||||||||| |||||    
T  15822569 aaagcataattcaccatttgag 15822548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 3895035 - 3895155
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||||||||| ||||| ||||||||||||||     
T  3895035 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaaca 3895134  T
Q  187 atgcataattcaccaattgag 207  Q
      |||||||||||||||||||    
T  3895135 tagcataattcaccaattgag 3895155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 47289788 - 47289911
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    ||||||||||||||||| | ||||||||||||||||||||   | |||||| |||| ||||| |||| |||||||||||||| | ||| |||||||||||    
T  47289788 aatcatgaatcatgcaa-cacaagccatgaattatcatcatcaacatgacttaacagcaacagcaacaattgatcatgaaacttttcacaattcatcaac 47289886  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| | |||||||||||||||||||    
T  47289887 aacaaagcataattcaccaattgag 47289911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 1937290 - 1937131
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| ||||| ||| |||||||  |||| || | |||||||||||||||||||| |||| || ||||||||  ||||||||||||| ||    
T  1937290 atttcacaaaaccaccaacaataatccatttctcaacaaaaaattatgaatcatgcaaacccaagtcatgtatcatcatcaacaatatgactaaacatca 1937191  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||            ||||||||||||||||| |||||||||||||||||| |||||    
T  1937190 acaacaaccattgatcat------------aattcatcaacaaccatacataattcaccaattgagcataat 1937131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 45452407 - 45452305
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    ||||||||||||||| |||||||||||||||||||||||||  | |||||  | |||||||||| || |||||||||||||| ||||| |||||||||||    
T  45452407 aatcatgaatcatgccaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacgacaattgatcatgaaacttatcacaattcatcaac 45452308  T
Q  183 aac 185  Q
    |||    
T  45452307 aac 45452305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 44865234 - 44865360
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgact---aaacaacaacaacaaccattgatcatgaaacatatcaaaattcatc 179  Q
    |||||||||| |||||| |||||||||||||||||||| ||  | ||||||    ||||||||||||||| ||| |||||||||| ||||| ||||||||    
T  44865234 aatcatgaattatgcaa-cccaagccatgaattatcataaactacatgacttaacaacaacaacaacaacaattaatcatgaaacttatcacaattcatc 44865332  T
Q  180 aacaaccatgcataattcaccaattgag 207  Q
    |||||  |||||||||||||||||||||    
T  44865333 aacaaaaatgcataattcaccaattgag 44865360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 59 - 204
Target Start/End: Complemental strand, 26070530 - 26070384
Alignment:
Q  59 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    |||||||| | ||||||  ||||||| |||||||||||||| ||||||||||||||| |||||| |  | || ||| | ||||||||||| | |||||||    
T  26070530 aacaacaacttatttctcaacaacaaatcatgaatcatgcatacccaagccatgaataatcatccacaacatcacttagcaacaacaacatcaattgatc 26070431  T
Q  158 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 204  Q
    ||||||| ||||| ||||||||||||||    |||||||||||||||    
T  26070430 atgaaacttatcacaattcatcaacaacataacataattcaccaatt 26070384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 59 - 204
Target Start/End: Complemental strand, 26094317 - 26094171
Alignment:
Q  59 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    |||||||| | ||||||  ||||||| |||||||||||||| ||||||||||||||| |||||| |  | || ||| | ||||||||||| | |||||||    
T  26094317 aacaacaacttatttctcaacaacaaatcatgaatcatgcatacccaagccatgaataatcatccacaacatcacttagcaacaacaacatcaattgatc 26094218  T
Q  158 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 204  Q
    ||||||| ||||| ||||||||||||||    |||||||||||||||    
T  26094217 atgaaacttatcacaattcatcaacaacataacataattcaccaatt 26094171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 207
Target Start/End: Complemental strand, 12248395 - 12248237
Alignment:
Q  51 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 149  Q
    ||||||| |||||||  ||||||||  ||||||| |||||||||||||| ||||||| |||| ||||||||| |  | || ||| | ||||||||||| |    
T  12248395 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcatacccaagtcatgcattatcatccacaacatcacttagcaacaacaacatc 12248296  T
Q  150 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattc-accaattgag 207  Q
    ||||||||||||| | ||||| |||||| |||||||   ||||||||| ||||||||||    
T  12248295 cattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgag 12248237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 143652 - 143769
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||| |||||| |||||||||||||||||||| ||  | |||||| |||||||||||      ||||||||||||| | ||| |||||||||||    
T  143652 aatcatgaattatgcaa-cccaagccatgaattatcattaacaacatgacttaacaacaacaa------ttgatcatgaaacttttcacaattcatcaac 143744  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| | |||||||||||||||||||    
T  143745 aacaaagcataattcaccaattgag 143769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 16570247 - 16570122
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||| |||||||||||||||||||||| |  | || ||| | ||||||||||| | |||||||||||||| ||||  |||||| ||||    
T  16570247 aatcatgaatcatgcatacccaagccatgaattatcatccacgacatcacttagcaacaacaacatcaattgatcatgaaacttatctcaattcaacaac 16570148  T
Q  183 aaccatgcataattc-accaattgag 207  Q
    |||   ||||||||| ||||||||||    
T  16570147 aacatagcataattcaaccaattgag 16570122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 16595415 - 16595540
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||| |||||||||||||||||||||| |  | || ||| | ||||||||||| | |||||||||||||| ||||  |||||| ||||    
T  16595415 aatcatgaatcatgcatacccaagccatgaattatcatccacgacatcacttagcaacaacaacatcaattgatcatgaaacttatctcaattcaacaac 16595514  T
Q  183 aaccatgcataattc-accaattgag 207  Q
    |||   ||||||||| ||||||||||    
T  16595515 aacatagcataattcaaccaattgag 16595540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 49047915 - 49047813
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||| |||||||||||||||||||| |||  | || ||| | ||||||||||| | |||||||||||| | ||||| |||||| ||||    
T  49047915 aatcatgaatcatgcatacccaagccatgaattatcagcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaac 49047816  T
Q  183 aac 185  Q
    |||    
T  49047815 aac 49047813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 207
Target Start/End: Original strand, 13274753 - 13274918
Alignment:
Q  44 ttttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 142  Q
    |||||| |||| || |||||||  ||||||||  |||||||  ||||||||||||| ||| ||||||||||| ||||||||  | || ||| | ||||||    
T  13274753 ttttaccaaactaccaacaacatctcatttctcaacaacaaaacatgaatcatgcataccaaagccatgaatcatcatcaacaacatcacttagcaacaa 13274852  T
Q  143 caacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattc-accaattgag 207  Q
    ||||| | |||||||||||| | ||||| |||||| |||||||   ||||||||| ||||||||||    
T  13274853 caacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgag 13274918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 14272203 - 14272049
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaag 106  Q
    ||||||| ||| | |||||||||||| ||||||||||||||||||||||| | |||||| ||||||||   || | |||||||||| ||| | || ||||    
T  14272203 acatcattaaaataaaacttcttcatcatcaacccattttacaaaaccaccaccaacaactcatttctcatcatctaatcatgaattatgaacactcaag 14272104  T
Q  107 ccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatga 161  Q
    |||||||| |||| |||  |||| | | | ||||||||||| | ||||| |||||    
T  14272103 ccatgaatcatcaacaacaatatcatttagcaacaacaacatcaattgaacatga 14272049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 12370081 - 12369957
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||| ||| ||||||||||| || ||  |  | || ||| | ||||||||||| | ||| |||||||||  ||||| |||||| ||||    
T  12370081 aatcatgaatcatgcatacctaagccatgaataattatgcacaacatcacttagcaacaacaacatcaattaatcatgaaagttatcacaattcaacaac 12369982  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| | |||||||||||||||||||    
T  12369981 aacaaggcataattcaccaattgag 12369957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 185
Target Start/End: Complemental strand, 16915217 - 16915067
Alignment:
Q  36 tcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 134  Q
    |||||||||||||||||||||  |||||||| ||| ||||   || | |||||||| | ||| | ||||||||||||||| |||| |||  ||||||||     
T  16915217 tcaacccattttacaaaaccaacaacaacaactcaattctcttcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatgactt 16915118  T
Q  135 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    | ||||||||||| | ||||| |||||| |  |||| |||||| |||||||    
T  16915117 agcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaac 16915067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 17224220 - 17224048
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    ||||||||||||||| |||||||| ||||||||   |||| |||||||||| ||| | ||||||||||||||| ||||| ||  | || ||| | |||||    
T  17224220 attttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcattaacaacatcacttagcaaca 17224121  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaa-ttgagtataat 213  Q
    |||||| | ||||| |||||  | ||  | |||||| |||||||   |||||||||| ||| |||||||||||    
T  17224120 acaacatcaattgaacatgactcttacaacaattcaacaacaacatagcataattcaacaatttgagtataat 17224048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 48356602 - 48356752
Alignment:
Q  36 tcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 134  Q
    |||||||||||||||||||||  |||||||| ||| ||||   || | |||||||| | ||| | ||||||||||||||| |||| |||  |||| |||     
T  48356602 tcaacccattttacaaaaccaacaacaacaactcaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 48356701  T
Q  135 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    | ||||||||||| | ||||| |||||| |  |||| |||||| |||||||    
T  48356702 agcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaac 48356752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 213
Target Start/End: Original strand, 13377535 - 13377666
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||| | ||| | ||||||||||||||| ||||||||  | || ||| | ||||||||||| | ||||| |||||| | ||||| |||||| ||||    
T  13377535 aatcatgatttatgaacacccaagccatgaatcatcatcaacaacattacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaac 13377634  T
Q  183 aaccatgcataattcaccaa-ttgagtataat 213  Q
    |||   |||||||| | ||| |||||||||||    
T  13377635 aacatagcataattaatcaatttgagtataat 13377666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 6373 - 6202
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| |||||||||||||||||||||| |||| || ||||||||  |||| |||||||||||    
T  6373 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagtcatgtatcatcatcaacaatattactaaacaaca 6274  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  6273 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 6202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 31570 - 31399
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| | |||||||||||||||| |||||||| || ||||||||  ||||||||||||||||    
T  31570 atttcacaaaaccaccaacaacaatccatttctcaacaacaaattatgaatcatgcaaacctaagccatgtatcatcatcaacaatatgactaaacaaca 31471  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  31470 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 31399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 112; Significance: 9e-57; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 24890 - 25088
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagc 107  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||||||||||||||| |||||||||    
T  24890 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgc-aacccaagc 24988  T
Q  108 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    ||||||||||||||||  | ||| |  | ||||||||||||| ||||||| |||||| ||||| |||||| ||||||| |  ||||||||||||||||||    
T  24989 catgaattatcatcaacaacatgccatatcaacaacaacaacaattgatcgtgaaacttatcacaattcaacaacaacaaaacataattcaccaattgag 25088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 78 - 207
Target Start/End: Original strand, 25213 - 25341
Alignment:
Q  78 acaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattca 177  Q
    |||||||||||||||||||||| |||||||||||||||||||||||  | ||| |  | ||||||||||||| ||||||| |||||| ||||| ||||||    
T  25213 acaacaatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgccatatcaacaacaacaacaattgatcgtgaaacttatcacaattca 25311  T
Q  178 tcaacaaccatgcataattcaccaattgag 207  Q
     ||||||| |  ||||||||||||||||||    
T  25312 acaacaacaaaacataattcaccaattgag 25341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 41274 - 41445
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| | |||||||||||||||| |||||||| || ||||||||  ||||||||||||||||    
T  41274 atttcacaaaaccaccaacaacaatccatttctcaacaacaaattatgaatcatgcaaacctaagccatgtatcatcatcaacaatatgactaaacaaca 41373  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  41374 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 41445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 1e-55; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 30 - 213
Target Start/End: Original strand, 14951713 - 14951898
Alignment:
Q  30 tcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 127  Q
    |||| ||||||||||||| || ||| ||| ||||||||| |||||||  ||||||| ||||||||||||||||||||||||||  || ||||||||  ||    
T  14951713 tcataatcaacccattttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaat 14951812  T
Q  128 atgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  14951813 atgactaaataacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 14951898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 43 - 206
Target Start/End: Complemental strand, 25119498 - 25119333
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaac 140  Q
    |||| |||||||||| ||||||||| |||||||  |||||||  | ||||||||||||||||||||||||| || || |||||  |||||||||||||||    
T  25119498 atttcacaaaaccaccaacaacaatccatttctcaacaacaaaattatgaatcatgcaaacccaagccatgtatcattatcaacaatatgactaaacaac 25119399  T
Q  141 aacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattga 206  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  25119398 aacaacaaccattgatcatgaaacatatcacaattcatcaaaaaccatgcataattcaccaattga 25119333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 5682817 - 5682646
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| |||||||||||||||||||||| |||  || ||||||||  |||||| |||| ||||    
T  5682817 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagacatatatcatcatcaacaatatgaataaaaaaca 5682718  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    |||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  5682717 acaacaaccaataatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 5682646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 89 - 207
Target Start/End: Complemental strand, 53704968 - 53704850
Alignment:
Q  89 gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccat 188  Q
    |||| ||||||||||||||||||||||||||||||  | |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  53704968 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaaccat 53704869  T
Q  189 gcataattcaccaattgag 207  Q
    |||||||||||||||||||    
T  53704868 gcataattcaccaattgag 53704850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 43 - 207
Target Start/End: Original strand, 34395222 - 34395387
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| ||||||||||||||||| |||||||||||||||||||||  | |||||  | |||||    
T  34395222 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaactcaagccatgaattatcatcaacaacatgacatagcaaca 34395321  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    |||||| | |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  34395322 acaacatcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgag 34395387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 211
Target Start/End: Complemental strand, 55376838 - 55376710
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||||||||||||||||||||||||||||  | || | | ||||||||||||||| |||||||||||||| ||||| |||||||||||    
T  55376838 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacataatttaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaac 55376739  T
Q  183 aaccatgcataattcaccaattgagtata 211  Q
    ||| ||| |||||||||||||||||||||    
T  55376738 aacaatgtataattcaccaattgagtata 55376710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 86 - 211
Target Start/End: Complemental strand, 23270172 - 23270047
Alignment:
Q  86 catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||| | ||||||||||| || ||||| ||||||||||||||    
T  23270172 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaattgatcatgatacttatcacaattcatcaacaac 23270073  T
Q  186 catgcataattcaccaattgagtata 211  Q
     |||||||||||| ||||||||||||    
T  23270072 aatgcataattcatcaattgagtata 23270047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 44055924 - 44056045
Alignment:
Q  86 catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    ||||||||||||||||||||||||||||||||||||||  | ||| |||||| ||||||||| | |||||||||||||| ||||| |||||||||||||     
T  44055924 catgaatcatgcaaacccaagccatgaattatcatcaacaacatggctaaaccacaacaacatcaattgatcatgaaacttatcacaattcatcaacaat 44056023  T
Q  186 catgcataattcaccaattgag 207  Q
     |||||||||||||||||||||    
T  44056024 aatgcataattcaccaattgag 44056045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 21959700 - 21959580
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    ||||||||||||| |||||||||||||||||||||||  | |||||||||||||||||||| | |||||||||||||| ||||| ||||||||||||||     
T  21959700 atgaatcatgcaagcccaagccatgaattatcatcaacaacatgactaaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaaca 21959601  T
Q  187 atgcataattcaccaattgag 207  Q
      |||||||||||||||||||    
T  21959600 tagcataattcaccaattgag 21959580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 99 - 207
Target Start/End: Original strand, 30457925 - 30458033
Alignment:
Q  99 aacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattca 198  Q
    ||||||||||||||||||||||||| || |||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||| |||||||    
T  30457925 aacccaagccatgaattatcatcaaccacatgacttaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaacaacaatgcgtaattca 30458024  T
Q  199 ccaattgag 207  Q
    |||||||||    
T  30458025 ccaattgag 30458033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 820153 - 820033
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    ||||||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||||   ||||||||||||| ||||| |||||||||||    
T  820153 aatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgacttaacaacaacaacaa---ttgatcatgaaacttatcacaattcatcaac 820058  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| |||||||||||||||||||||    
T  820057 aacaatgcataattcaccaattgag 820033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 89 - 207
Target Start/End: Original strand, 44346839 - 44346957
Alignment:
Q  89 gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccat 188  Q
    |||| ||||||||||||||||||||||||||||||  | || |||||||||||||||||||  ||||||||||||||||||| ||||||| |||||| ||    
T  44346839 gaattatgcaaacccaagccatgaattatcatcaacgacatcactaaacaacaacaacaacatttgatcatgaaacatatcacaattcatgaacaacaat 44346938  T
Q  189 gcataattcaccaattgag 207  Q
    | |||||||||||||||||    
T  44346939 gtataattcaccaattgag 44346957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 207
Target Start/End: Original strand, 16732150 - 16732299
Alignment:
Q  59 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    |||||||  ||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||  | |||||| | ||||||| ||| | |||||||    
T  16732150 aacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacgacatcaattgatc 16732249  T
Q  158 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    ||||||| ||||| ||||||||||||||   |||||||||||||||||||    
T  16732250 atgaaacttatcacaattcatcaacaacatagcataattcaccaattgag 16732299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 15272557 - 15272431
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||  |  | || ||| ||||||||||||| | |||||||||| ||||||||| |||||||||||||||    
T  15272557 atgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattgatcatggaacatatcacaattcatcaacaacc 15272458  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  15272457 atgcataattcaccaattgagcataat 15272431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 53907931 - 53907818
Alignment:
Q  89 gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccat 188  Q
    |||| ||||||||||||||||||||||||||||||  | |||||||| ||||||||||||   ||||||||||||||| ||| |||||||||||||| ||    
T  53907931 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaatcaacaacaacaa---ttgatcatgaaacatttcacaattcatcaacaacaat 53907835  T
Q  189 gcataattcaccaattg 205  Q
    |||||||||||||||||    
T  53907834 gcataattcaccaattg 53907818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 8872699 - 8872588
Alignment:
Q  99 aacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaacca---ttgatcatgaaacatatcaaaattcatcaacaaccatgcataat 195  Q
    |||||||||||||| ||||||||||  | |||||||||||||||||||||| |   ||||||||||||||||||| |||||||||||||| | |||||||    
T  8872699 aacccaagccatgagttatcatcaacaacatgactaaacaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaacgcataat 8872600  T
Q  196 tcaccaattgag 207  Q
    ||||||||||||    
T  8872599 tcaccaattgag 8872588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 12837441 - 12837317
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| ||||||| |||||||| ||||| |||| | ||||    
T  12837441 aatcatgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatccattgaccatgaaacttatcacaatttaacaac 12837342  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    |||   |||||||||||||||||||    
T  12837341 aacatagcataattcaccaattgag 12837317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 83 - 206
Target Start/End: Complemental strand, 45459096 - 45458973
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    ||||||||||||||||||||||||||||| |||||| ||||  | |||||  | ||||||||||| | |||| ||||||||| ||||| |||||| ||||    
T  45459096 aatcatgaatcatgcaaacccaagccatggattatcttcaacaacatgacatatcaacaacaacatcaattggtcatgaaacttatcacaattcaacaac 45458997  T
Q  183 aaccatgcataattcaccaattga 206  Q
    | | | ||||||||||||||||||    
T  45458996 agcaaagcataattcaccaattga 45458973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 30232733 - 30232613
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||| ||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| |||||||||||||||| ||||| |||| | |||||||     
T  30232733 atgaataatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatccattgatcatgaaacttatcacaatttaacaacaaca 30232634  T
Q  187 atgcataattcaccaattgag 207  Q
      |||||||||||||||||||    
T  30232633 tagcataattcaccaattgag 30232613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 198
Target Start/End: Complemental strand, 13809791 - 13809636
Alignment:
Q  44 ttttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 142  Q
    |||||| |||| ||||||||||  ||||||||  ||||| |||||||||||||||| | ||||||||||||||||||||||  | || | | | ||||||    
T  13809791 ttttaccaaactactaacaacatctcatttctcaacaaccaatcatgaatcatgcatatccaagccatgaattatcatcaacaacatcaattagcaacaa 13809692  T
Q  143 caacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattca 198  Q
    ||||| | |||||||||||| | ||||| |||||| |||||||   ||||||||||    
T  13809691 caacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattca 13809636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 16522748 - 16522831
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattca-tttcttgacaacaatcatga 90  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||| ||| |||||  |||||||||||||    
T  16522748 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatga 16522831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 51 - 185
Target Start/End: Complemental strand, 18494602 - 18494467
Alignment:
Q  51 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 149  Q
    ||||||| |||||||  ||||||||  ||||||| |||||||||||||| ||||||||||||| ||| ||||||  | || ||| |||||||||| ||||    
T  18494602 aaaccaccaacaacatctcatttctcaacaacaagtcatgaatcatgcatacccaagccatgagttaccatcaacaacatcacttaacaacaacagcaac 18494503  T
Q  150 cattgatcatgaaacatatcaaaattcatcaacaac 185  Q
     |||||||||||| | || || |||||| |||||||    
T  18494502 aattgatcatgaatcttaacacaattcaacaacaac 18494467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 9295624 - 9295707
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattca-tttcttgacaacaatcatga 90  Q
    ||||||||||| |||||||||||| |||||||| ||||||||| |||||| |||||||| ||| |||||  |||||||||||||    
T  9295624 acatcatcaaaatcaaacttcttctttatcaactcattttacataaccaccaacaacaactcattttctcaacaacaatcatga 9295707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 27960984 - 27961078
Alignment:
Q  90 aatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaa 184  Q
    ||||||||| |||||| |||||||||||||||||  | || ||| ||||||||||||| | |||||||||||| | ||| | |||||| ||||||    
T  27960984 aatcatgcatacccaaaccatgaattatcatcaacaacatcacttaacaacaacaacatcaattgatcatgaatcttataacaattcaacaacaa 27961078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 52265749 - 52265628
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||| ||| | ||||||||||||||| |||| ||   |||| ||| | ||||||||||| | ||||| |||||| | ||||| |||||| ||||    
T  52265749 aatcatgaattatgaacacccaagccatgaatcatcaacatcaatatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaac 52265650  T
Q  183 aaccatgcataattcaccaatt 204  Q
    |||  ||||||||||| |||||    
T  52265649 aacattgcataattcaacaatt 52265628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 7186159 - 7186120
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccatttt 47  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  7186159 acatcatcaaaatcaaacttcttcattatcaacccatttt 7186120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 204
Target Start/End: Original strand, 15044834 - 15044955
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||| | ||| | ||||||||||||||| ||||||||  | || ||| | ||||||||||| | ||||| |||||| | ||||| |||||| ||||    
T  15044834 aatcatgatttatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaac 15044933  T
Q  183 aaccatgcataattcaccaatt 204  Q
    |||   |||||||||| |||||    
T  15044934 aacatagcataattcatcaatt 15044955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 37957314 - 37957230
Alignment:
Q  36 tcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatca 119  Q
    |||||||||||||||||  ||| |||||||| |||||| |   |||| |||||||||| ||||| ||||||||| ||||||||||    
T  37957314 tcaacccattttacaaagtcaccaacaacaactcatttatcatcaacaaatcatgaattatgcacacccaagccgtgaattatca 37957230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 15109590 - 15109459
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||| | ||| | ||||||||||||||| ||||||||  | || ||| | ||||||||||| | ||||| |||||| | ||||| |||||| ||||    
T  15109590 aatcatgatttatgaacacccaagccatgaatcatcatcaacaacattacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaac 15109491  T
Q  183 aaccatgcataattcaccaa-ttgagtataat 213  Q
    |||   |||||||| | ||| |||||||||||    
T  15109490 aacatagcataatttatcaatttgagtataat 15109459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 59 - 213
Target Start/End: Complemental strand, 12794 - 12639
Alignment:
Q  59 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    |||||||||| ||||||  ||||||| | |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  12794 aacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaacaacaacaaccattaatc 12695  T
Q  158 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||    
T  12694 atgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcataat 12639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 19175 - 19049
Alignment:
Q  59 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    |||||||||| ||||||  ||||||| | |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  19175 aacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaacaacaacaaccattaatc 19076  T
Q  158 atgaaacatatcaaaattcatcaacaa 184  Q
    ||||||||||||| |||||||||||||    
T  19075 atgaaacatatcacaattcatcaacaa 19049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 43 - 188
Target Start/End: Original strand, 30056 - 30202
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  30056 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaatatgactaaacaaca 30155  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccat 188  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  30156 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccat 30202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 3e-53; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 30 - 213
Target Start/End: Original strand, 22366970 - 22367154
Alignment:
Q  30 tcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 127  Q
    |||| ||||||||||||| || ||| ||| ||||||||| |||||||  ||||||| |||||||||||||||||||||| |||| || ||||||||  ||    
T  22366970 tcataatcaacccattttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagtcatgtatcatcatcaacaat 22367069  T
Q  128 atgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||    
T  22367070 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcat-attcaccaattgagcataat 22367154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 59 - 213
Target Start/End: Original strand, 21859992 - 21860147
Alignment:
Q  59 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    |||||||||||||||||  ||||||| | ||||||||||||||||| ||||||| || ||||||||  |||||||||||||||||||||||||||| |||    
T  21859992 aacaacaattcatttctcaacaacaaattatgaatcatgcaaacccgagccatgtatcatcatcaacaatatgactaaacaacaacaacaaccattaatc 21860091  T
Q  158 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  21860092 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 21860147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 30 - 213
Target Start/End: Complemental strand, 15861728 - 15861545
Alignment:
Q  30 tcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 127  Q
    |||| ||||||||||||| || ||| ||| ||||||||| |||||||  ||||||| |||||||||||||||||||||| |||| || ||||||||  ||    
T  15861728 tcataatcaacccattttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagtcatgcatcatcatcaacaat 15861629  T
Q  128 atgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  15861628 atgactaaacaa--acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 15861545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 48 - 213
Target Start/End: Complemental strand, 44035255 - 44035090
Alignment:
Q  48 acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaac 146  Q
    |||||||||| ||||||||| |||||||  ||||||| | ||||||||||||||| |||||||| | | ||||||||  |||||||||||||||||||||    
T  44035255 acaaaaccaccaacaacaatccatttctcaacaacaaattatgaatcatgcaaactcaagccatta-tcatcatcaactatatgactaaacaacaacaac 44035157  T
Q  147 aaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||    
T  44035156 aaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaaatgagcataat 44035090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 78 - 207
Target Start/End: Original strand, 49967651 - 49967780
Alignment:
Q  78 acaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattca 177  Q
    ||||||| ||||||||||||||||| |||| |||||||||||||||  | |||||| ||||||||||||| | |||||||||||||| ||||| ||||||    
T  49967651 acaacaaccatgaatcatgcaaaccgaagcaatgaattatcatcaacaacatgacttaacaacaacaacatcaattgatcatgaaacgtatcacaattca 49967750  T
Q  178 tcaacaaccatgcataattcaccaattgag 207  Q
    |||||||| ||| |||||||||||||||||    
T  49967751 tcaacaacaatgtataattcaccaattgag 49967780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 22403350 - 22403227
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||| ||||||||||||||||||||||||||  | |||||| |||||||||||||||  || |||||||||| ||||| |||||||||||    
T  22403350 aatcatgaatcatg-aaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacaacagttaatcatgaaacttatcacaattcatcaac 22403252  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| |||||||||||||||||||||    
T  22403251 aacaatgcataattcaccaattgag 22403227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 35522560 - 35522436
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||||||||||||||||||||||||||||  | |||||  | ||||||||||| | |||||||||||||| ||||| |||||| ||||    
T  35522560 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacgtatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaac 35522461  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| | |||||||||||||||||||    
T  35522460 aacaaagcataattcaccaattgag 35522436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 89 - 207
Target Start/End: Original strand, 41212081 - 41212202
Alignment:
Q  89 gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaaca---acaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    |||| ||||||||||||||||||||||||||||||  | |||||||||||   ||||||||||| |||||||||||||||||||| ||||||||||||||    
T  41212081 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaac 41212180  T
Q  186 catgcataattcaccaattgag 207  Q
      |||||||||||| |||||||    
T  41212181 agtgcataattcactaattgag 41212202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 207
Target Start/End: Original strand, 21718210 - 21718358
Alignment:
Q  59 aacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 158  Q
    |||||||  ||||||||  | ||||| ||||||||||||||||||||||||||||||||||||||  | |||||  | ||||||||||| | ||||||||    
T  21718210 aacaacatctcatttctcaagaacaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatca 21718309  T
Q  159 tgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    |||||| ||||| || |||||||||||   |||||||||||||||||||    
T  21718310 tgaaacttatcacaaatcatcaacaacatagcataattcaccaattgag 21718358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 75 - 207
Target Start/End: Complemental strand, 27330005 - 27329872
Alignment:
Q  75 ttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaa 173  Q
    |||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| |||||||||||||||| ||||| ||    
T  27330005 ttgacaacaaattatgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatccattgatcatgaaacttatcacaa 27329906  T
Q  174 ttcatcaacaaccatgcataattcaccaattgag 207  Q
    || | |||||||   |||||||||||||||||||    
T  27329905 tttaacaacaacatagcataattcaccaattgag 27329872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 35054766 - 35054886
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| |||||||||||||||| ||||| | ||||||||| ||     
T  35054766 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatccattgatcatgaaacttatcacagttcatcaactaca 35054865  T
Q  187 atgcataattcaccaattgag 207  Q
      |||||||||||||||||||    
T  35054866 tagcataattcaccaattgag 35054886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 51627945 - 51627805
Alignment:
Q  44 ttttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat-atgactaaacaaca 141  Q
    |||||| ||||||| |||||||  ||||||||  ||| ||| |||||||||||||| |||||||||||||||||||||| ||||| || ||| | |||||    
T  51627945 ttttaccaaaccaccaacaacatctcatttctcaacagcaaatcatgaatcatgcatacccaagccatgaattatcatc-aacatcatcacttagcaaca 51627847  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaaca 183  Q
    |||||| | |||||||||||| | ||||| |||||| |||||    
T  51627846 acaacatcaattgatcatgaatcttatcacaattcaacaaca 51627805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 9784341 - 9784239
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    ||||||||||||||||| |||||||||||||| ||||||||  | |||||  | ||||||||||| | ||||||| |||||| ||||| |||||| ||||    
T  9784341 aatcatgaatcatgcaagcccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatcaattgatcttgaaacttatcacaattcaacaac 9784242  T
Q  183 aac 185  Q
    |||    
T  9784241 aac 9784239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 27674755 - 27674838
Alignment:
Q  36 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatca 119  Q
    |||||||||||||||||  ||| |||||||| ||||||||   ||| |||||||||| ||||| ||||||||||||||||||||    
T  27674755 tcaacccattttacaaagtcaccaacaacaactcatttctcatcaaaaatcatgaattatgcacacccaagccatgaattatca 27674838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 22829712 - 22829629
Alignment:
Q  37 caacccattttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatca 119  Q
    ||||||||||||||||  ||| |||||||| ||||||||   |||||| |||||||| ||||| ||||||||||||||||||||    
T  22829712 caacccattttacaaagtcaccaacaacaactcatttctcatcaacaaatcatgaattatgcacacccaagccatgaattatca 22829629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 17608934 - 17609036
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||| | ||| | ||||||||||||||| |||| |||  |||| ||| ||||||||||||||| ||||| |||||| |  |||| |||||| ||||    
T  17608934 aatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttaacaacaacaacaacaattgaacatgaatctcatcataattcaacaac 17609033  T
Q  183 aac 185  Q
    |||    
T  17609034 aac 17609036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 19603055 - 19603139
Alignment:
Q  36 tcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatca 119  Q
    |||||||||||||||||  ||| |||||||| ||||||||   |||| |||||||||| || || ||||||| ||||||||||||    
T  19603055 tcaacccattttacaaagtcaccaacaacaactcatttctcatcaacaaatcatgaattattcacacccaagtcatgaattatca 19603139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 38033962 - 38033882
Alignment:
Q  36 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaatta 116  Q
    |||||||||||||||||  ||| |||||||| | ||||||   |||||||| ||||  ||||| |||||||||||||||||    
T  38033962 tcaacccattttacaaagtcaccaacaacaacttatttctcatcaacaatcgtgaactatgcacacccaagccatgaatta 38033882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 204
Target Start/End: Complemental strand, 9784248 - 9784184
Alignment:
Q  137 caacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 204  Q
    ||||||||||| | |||||||||||||| ||||| |||   |||||||| | ||||||||||||||||    
T  9784248 caacaacaacatcaattgatcatgaaacttatcacaat---tcaacaacaaagcataattcaccaatt 9784184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 147
Target Start/End: Original strand, 20177140 - 20177245
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| |||||||| ||||||||   |||||| |||||||| ||| | | ||||||||||||| ||||||||  | || ||| | |||||    
T  20177140 atttcacaaaaccaccaacaacaactcatttctcttcaacaaatcatgaattatgaatatccaagccatgaatcatcatcaacaacatcacttagcaaca 20177239  T
Q  142 acaaca 147  Q
    ||||||    
T  20177240 acaaca 20177245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 105; Significance: 1e-52; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 162469 - 162297
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaa-c 140  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| ||||||||||||||||||||||||||  || ||||||||  |||||||||||||| |    
T  162469 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaatatgactaaacaaac 162370  T
Q  141 aacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||    
T  162369 aacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcagaattcaccaattgagcataat 162297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 89 - 207
Target Start/End: Original strand, 164227 - 164345
Alignment:
Q  89 gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccat 188  Q
    |||| ||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||| ||    
T  164227 gaattatgcaaacccaagccatgaattaccatcaacaacatgactaaacaacaacaacaacatttgatcatgaaacatatcacaattcatcaacaacaat 164326  T
Q  189 gcataattcaccaattgag 207  Q
    |||||||||||||||||||    
T  164327 gcataattcaccaattgag 164345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 166547 - 166383
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| ||||||||| ||||| |  ||||||| ||||||||||||||||||||||||||| || ||||||||  |||| |       |||    
T  166547 atttcacaaaaccaccaacaacaatccatttttcaacaacaaatcatgaatcatgcaaacccaagccatgtatcatcatcaacaatatta-------aca 166455  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||    
T  166454 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcagaattcaccaattgagcataat 166383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 147
Target Start/End: Complemental strand, 116795 - 116690
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    ||||||||||||||| ||||||||| ||||| |   |||||| |||||||| ||| | ||||||||||||||| |||| |||  |||| ||| | |||||    
T  116795 attttacaaaaccaccaacaacaatccatttttcatcaacaaatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaaca 116696  T
Q  142 acaaca 147  Q
    ||||||    
T  116695 acaaca 116690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 103; Significance: 2e-51; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 79874 - 80000
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |    
T  79874 atgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaacaacaacaaccattaatcatgaaacatatcacaattcatcaacaatc 79973  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  79974 atgcataattcaccaattgagcataat 80000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 46171 - 46295
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||| ||| | ||||||||||||||| |||| |||  |||| ||| |  |||||||||| |||||||||||||||| ||||| |||| | ||||    
T  46171 aatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagaaacaacaacatccattgatcatgaaacttatcacaatttaacaac 46270  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    |||   |||||||||||||||||||    
T  46271 aacatagcataattcaccaattgag 46295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 40664 - 40788
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||| ||| | ||||||||||||||| |||| |||  |||| ||| | ||||||||||| |||||||||||||||| ||||| |||  | ||||    
T  40664 aatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatccattgatcatgaaacttatcacaatgtaacaac 40763  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||    |||||||||||||||||||    
T  40764 aatatagcataattcaccaattgag 40788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 430 - 234
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagc 107  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |  ||||||||  ||||||||||||||||||||||||||||||    
T  430 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaaaagctcatttctcaacaacaatcatgaatcatgcaaacccaagc 331  T
Q  108 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 204  Q
     |||||||||||||||  | |||||  | ||||||||||| | ||||||||| |||| ||||| |||||| ||||||| |  |||||||||| ||||    
T  330 tatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcattaaacttatcacaattcaacaacaacaaaacataattcacgaatt 234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 6679 - 6603
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaacaa 84  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| ||| ||||  |||||||    
T  6679 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaagaacaactcaattctcaacaacaa 6603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 1e-49; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 22274688 - 22274858
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| ||||||||| |||||||  |||||||| |||||||||||||| ||||||||||  || ||||||||  ||||||||||||| ||    
T  22274688 atttcacaaaaccaccaacaacaatccatttctcaacaacaattcatgaatcatgcaa-cccaagccatctatcatcatcaacaatatgactaaacatca 22274786  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||    
T  22274787 acaacaaccattgatcatgaaacacatcacaattcatcaacaaccatgcataattcaccaattgagcataat 22274858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 22283921 - 22284091
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| |||||||||||||||||  ||| |||| |||||||||||||| ||||||||||| || ||||||||  ||| ||||||||| ||    
T  22283921 atttcacaaaaccaccaacaacaattcatttctcaacagcaattcatgaatcatgcaa-cccaagccatgtatcatcatcaacaataagactaaacatca 22284019  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    | |||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||    
T  22284020 aaaacaacgattgatcatgaaacacatcacaattcatcaacaaccatgcataattcaccaattgagcataat 22284091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 59 - 207
Target Start/End: Complemental strand, 23836971 - 23836822
Alignment:
Q  59 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    |||||||  ||||||||  ||||||| ||| |||| ||||||||||||| ||||||||||||||||  | |||||||||||||||||||||| |||||||    
T  23836971 aacaacatctcatttctcaacaacaaatcaagaattatgcaaacccaagtcatgaattatcatcaacaaaatgactaaacaacaacaacaacaattgatc 23836872  T
Q  158 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  23836871 atgaaacatatcacaattcatcaacaacaatgcataattcaccaattgag 23836822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 32465867 - 32465988
Alignment:
Q  86 catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||| | |||||||||||||| ||||| |||||||||| |||    
T  32465867 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaagaac 32465966  T
Q  186 catgcataattcaccaattgag 207  Q
     |||||||||||||||||||||    
T  32465967 aatgcataattcaccaattgag 32465988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 89 - 207
Target Start/End: Complemental strand, 25876154 - 25876036
Alignment:
Q  89 gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccat 188  Q
    |||| ||||||||||||||||||||||||||||||  | |||||||||||| |||||||||  ||||||||||| ||||||| |||||||||||||| ||    
T  25876154 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaataacaacaacatttgatcatgaagcatatcacaattcatcaacaacaat 25876055  T
Q  189 gcataattcaccaattgag 207  Q
    |||||||||||||||||||    
T  25876054 gcataattcaccaattgag 25876036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 9653141 - 9653015
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||| ||||| | ||||||||||||| |||||  |||||||||||||||    
T  9653141 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacatcaacatctattgatcatgaaaaatatcgcaattcatcaacaacc 9653042  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    |||||||||||||||||||||||||||    
T  9653041 atgcataattcaccaattgagtataat 9653015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 21274293 - 21274168
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    ||||||||||| | |||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||||||||||||| | |||||||||||||||    
T  21274293 atgaatcatgcta-cccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacatattacaattcatcaacaacc 21274195  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    |||||||||||||||||||||||||||    
T  21274194 atgcataattcaccaattgagtataat 21274168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 98 - 211
Target Start/End: Original strand, 6879458 - 6879571
Alignment:
Q  98 aaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattc 197  Q
    ||||||||| |||| |||||||||||  | ||||||||| |||||||||||| ||||||||| |||||||||| |||||||||| ||| |||||||||||    
T  6879458 aaacccaagacatgtattatcatcaacaacatgactaaataacaacaacaacaattgatcattaaacatatcacaattcatcaataacaatgcataattc 6879557  T
Q  198 accaattgagtata 211  Q
    ||||||||||||||    
T  6879558 accaattgagtata 6879571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 83 - 206
Target Start/End: Complemental strand, 4448374 - 4448251
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||||||||||||||||||||||||||||  | |||||  | ||||||||||| | |||||||||||||| ||||| |||||| ||||    
T  4448374 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcataattcaacaac 4448275  T
Q  183 aaccatgcataattcaccaattga 206  Q
    ||| | |||| |||||||||||||    
T  4448274 aacaaagcatcattcaccaattga 4448251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 19433649 - 19433495
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaag 106  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||   |||| |||||||||| ||| | |||||||    
T  19433649 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaacacccaag 19433550  T
Q  107 ccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatga 161  Q
    |||||||| |||| |||  ||||  || | ||||||||||| | ||||| |||||    
T  19433549 ccatgaatcatcaacaacaatatctcttagcaacaacaacatcaattgaacatga 19433495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 43 - 207
Target Start/End: Original strand, 25601989 - 25602154
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| |||||||||||||||||| ||||||||| ||||||| ||  | |||||  | |||||    
T  25601989 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacctaagccatgatttatcataaacaacatgacatagcaaca 25602088  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    |||||| | |||||||||||||| ||||| ||||||||||| ||   |||||| ||||||||||||    
T  25602089 acaacatcaattgatcatgaaacttatcacaattcatcaaccacatagcataactcaccaattgag 25602154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 271176 - 271300
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    ||||||||||||||||||||||||| |||||||||||||||  | |||||  | ||||||||||| | |||||||||||||| ||||| |||||| ||||    
T  271176 aatcatgaatcatgcaaacccaagctatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaac 271275  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| |  ||||||||||||||||||    
T  271276 aacaaaacataattcaccaattgag 271300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 28974055 - 28974179
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||||||||||||||||||||||||||||  | |||||| | ||||||||||| | |||||||||||||| || || |||||||||||    
T  28974055 aatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaacttaccacaattcatcaac 28974154  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    |||   ||||||||| |||| ||||    
T  28974155 aacatagcataattcgccaaatgag 28974179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 27261787 - 27261900
Alignment:
Q  59 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    |||||||  ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||  | |||||| | ||||||||| | | |||||||    
T  27261787 aacaacatctcatttcttaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacaatatcaattgatc 27261886  T
Q  158 atgaaacatatcaa 171  Q
    ||||||| ||||||    
T  27261887 atgaaacttatcaa 27261900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 39 - 204
Target Start/End: Complemental strand, 36890972 - 36890805
Alignment:
Q  39 acccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 136  Q
    ||||||||| || ||||||  |||||||| | ||||||  ||||||| ||| |||||||||| ||||||||||||||| |||||| |  | || ||| |     
T  36890972 acccattttcaccaaaccaacaacaacaacttatttctcaacaacaaatcaagaatcatgcatacccaagccatgaataatcatccacaacatcacttag 36890873  T
Q  137 caacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 204  Q
    ||||||||||||| |||||||||||||| ||||| |||| |||||||||   ||||||||||||||||    
T  36890872 caacaacaacaacaattgatcatgaaacttatcacaatttatcaacaacatagcataattcaccaatt 36890805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 184
Target Start/End: Complemental strand, 22580140 - 22579999
Alignment:
Q  44 ttttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 142  Q
    |||||| ||| ||| |||||||  ||||||||  ||||||| |||||||||||||| ||||||||||||||||||||||||  | || ||  | || ||     
T  22580140 ttttaccaaaacaccaacaacatctcatttctccacaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacatatcagcag 22580041  T
Q  143 caacaaccattgatcatgaaacatatcaaaattcatcaacaa 184  Q
    ||||| | |||||||||||||| ||||| |||||| ||||||    
T  22580040 caacatcaattgatcatgaaacttatcacaattcaacaacaa 22579999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 24827044 - 24826961
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattca-tttcttgacaacaatcatga 90  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||||| |||||||  ||| |||||  |||||||||||||    
T  24827044 acatcatcaatatcaaacttcttctttatcaacccattttacaaaaccaccaacaacagctcattttctcaacaacaatcatga 24826961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 162
Target Start/End: Complemental strand, 3529 - 3403
Alignment:
Q  36 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaa 135  Q
    |||||||||||||||||  ||| |||||||| ||||||||   | |||||||||||| ||| | ||||||||||||||| ||||||||  | || ||| |    
T  3529 tcaacccattttacaaagtcaccaacaacaactcatttctcatctacaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcactta 3430  T
Q  136 acaacaacaacaaccattgatcatgaa 162  Q
     ||||||||||| | ||||| ||||||    
T  3429 gcaacaacaacatcaattgaacatgaa 3403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 25212977 - 25213042
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcattt 73  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||||||||| | |||||| ||||||    
T  25212977 acatcatcaaaatcaaatttcttctttatcaacccattttacaaaaccaccaccaacaactcattt 25213042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 43645824 - 43645882
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaa 66  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||||||| | ||||||    
T  43645824 acatcatcaaaatcaaactttttcattaccaacccattttacaaaaccaccaccaacaa 43645882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 207
Target Start/End: Complemental strand, 24571572 - 24571408
Alignment:
Q  44 ttttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 142  Q
    |||||| ||||||| |||||||  ||||||||  ||||||| ||||||||||| || | |||||| |||| ||||||||||  | || ||| ||||||||    
T  24571572 ttttaccaaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatacatagccaagc-atgagttatcatcaacaacatcacttaacaacaa 24571474  T
Q  143 caacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattc-accaattgag 207  Q
    ||||| | |||||||||||| | || || |||||| ||| |||   ||||||||| ||||||||||    
T  24571473 caacatcaattgatcatgaatcttaacacaattcaacaaaaacatagcataattcaaccaattgag 24571408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 722401 - 722437
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatca 119  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  722401 aatcatgaattatgcacacccaagccatgaattatca 722437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 24884643 - 24884683
Alignment:
Q  35 atcaacccattttacaaaaccactaacaacaattcatttct 75  Q
    ||||||||||||||||||||||  |||||||| ||||||||    
T  24884643 atcaacccattttacaaaaccaacaacaacaactcatttct 24884683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 48 - 213
Target Start/End: Complemental strand, 736 - 570
Alignment:
Q  48 acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaac 146  Q
    |||||||||| ||||| ||| |||||||  ||||||| | || |||||||||||||||||||||| || ||||||||  |||||| |||| | |||||||    
T  736 acaaaaccaccaacaataatccatttctcaacaacaaattattaatcatgcaaacccaagccatgtatcatcatcaacaatatgagtaaatatcaacaac 637  T
Q  147 aaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 213  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  636 aaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 90; Significance: 1e-43; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 59 - 207
Target Start/End: Complemental strand, 132516 - 132367
Alignment:
Q  59 aacaacaattcatttcttgacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    ||||||| |||||||||  ||||||| | |||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||| | |||||||    
T  132516 aacaacatttcatttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaattgatc 132417  T
Q  158 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  132416 atgaaacttatcacaattcatcaacaacgatgcataattcaccaattgag 132367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 207
Target Start/End: Original strand, 11660 - 11818
Alignment:
Q  51 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 149  Q
    ||||||| |||||||  ||||||||  ||||||| |||||||||||||| | ||||||||||||||||||||||  |  | ||| | ||||||||||| |    
T  11660 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcataaccaagccatgaattatcatcaacaacgtcacttagcaacaacaacatc 11759  T
Q  150 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattc-accaattgag 207  Q
     |||||||||||||| ||||| |||||  |||||||   ||||||||| ||||||||||    
T  11760 aattgatcatgaaacttatcacaattctacaacaacatagcataattcaaccaattgag 11818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 91 - 206
Target Start/End: Original strand, 88289 - 88404
Alignment:
Q  91 atcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgc 190  Q
    |||||||| |||||||||| |||||| |||| |  | || ||| ||||||| ||||| | |||||||||||||| ||||| ||||||||||||||   ||    
T  88289 atcatgcatacccaagccaagaattagcatccataacatcacttaacaacagcaacatctattgatcatgaaacttatcacaattcatcaacaacatagc 88388  T
Q  191 ataattcaccaattga 206  Q
    ||||||||||||||||    
T  88389 ataattcaccaattga 88404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 32220 - 32333
Alignment:
Q  94 atgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcata 193  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| || ||||    
T  32220 atgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaattcata 32319  T
Q  194 attcaccaattgag 207  Q
    ||||||||||||||    
T  32320 attcaccaattgag 32333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 42083 - 41970
Alignment:
Q  94 atgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcata 193  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| || ||||    
T  42083 atgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaattcata 41984  T
Q  194 attcaccaattgag 207  Q
    ||||||||||||||    
T  41983 attcaccaattgag 41970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 207
Target Start/End: Complemental strand, 11964 - 11825
Alignment:
Q  68 tcatttcttgacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacata 167  Q
    ||||||||  ||| |||||||||| ||||||||| |||||||||||||||||||||  | |||||| | ||||||||||| | |||||||||||||| ||    
T  11964 tcatttctcaacaccaatcatgaaccatgcaaactcaagccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaactta 11865  T
Q  168 tcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  11864 tcaaaattcatcaacaacaatgcataattcaccaattgag 11825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 22700 - 22821
Alignment:
Q  86 catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||||| | |||||||||||||| ||||| |||||||||||||     
T  22700 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacaaaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaaa 22799  T
Q  186 catgcataattcaccaattgag 207  Q
     |||||||||||||||||||||    
T  22800 aatgcataattcaccaattgag 22821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 82; Significance: 7e-39; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 70860 - 70739
Alignment:
Q  86 catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    ||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||| ||| |||||||||||| ||||| |||||||||||||     
T  70860 catgaatcatgcaaacccaagtcatgaattatcatcaacaacatgactaaacaacaacaacatccaatgatcatgaaacttatcacaattcatcaacaat 70761  T
Q  186 catgcataattcaccaattgag 207  Q
     |||||||||||||||||||||    
T  70760 aatgcataattcaccaattgag 70739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 211
Target Start/End: Original strand, 60812 - 60940
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||||||||||| ||||||||||||||||  | |||||  | ||||||||||| | |||||||||||||| ||||| |||||| ||||    
T  60812 aatcatgaatcatgcaaacccaagtcatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaac 60911  T
Q  183 aaccatgcataattcaccaattgagtata 211  Q
    ||| | |||||||||||||||| ||||||    
T  60912 aacaaagcataattcaccaattaagtata 60940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 79; Significance: 4e-37; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 13631 - 13505
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||    
T  13631 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 13532  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  13531 atgcataattcaccaattgagcataat 13505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 21605 - 21479
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||  |  | || ||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||    
T  21605 atgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 21506  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  21505 atgcataattcaccaattgagcataat 21479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 89 - 207
Target Start/End: Original strand, 7581 - 7699
Alignment:
Q  89 gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccat 188  Q
    |||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||| | |||||||||||||| ||||| |||| ||||||||| ||    
T  7581 gaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaattgatcatgaaacttatcataatttatcaacaacaat 7680  T
Q  189 gcataattcaccaattgag 207  Q
    |||||||||||||||||||    
T  7681 gcataattcaccaattgag 7699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 14959 - 15085
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||    
T  14959 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 15058  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  15059 atgcataattcaccaattgagcataat 15085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 5484 - 5363
Alignment:
Q  86 catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    |||||||||||||||||||| |||||||||||||||||  | |||||| | ||||||||||| | |||||||||||||||||||| ||||||||||||||    
T  5484 catgaatcatgcaaacccaaaccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaacatatcacaattcatcaacaac 5385  T
Q  186 catgcataattcaccaattgag 207  Q
     |||| ||||||||||||||||    
T  5384 aatgcctaattcaccaattgag 5363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 207
Target Start/End: Complemental strand, 9156 - 8998
Alignment:
Q  51 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 149  Q
    |||||||  ||||||  ||||||||  ||||||| |||||||||||||| ||| ||||||||||||||||||||  | || ||| | ||||||||||| |    
T  9156 aaaccaccgacaacatctcatttctcaacaacaaatcatgaatcatgcatacctaagccatgaattatcatcaacaacatcacttagcaacaacaacatc 9057  T
Q  150 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattc-accaattgag 207  Q
     |||||||||||||| ||||| |||| | |||||||   ||||||||| ||||||||||    
T  9056 aattgatcatgaaacttatcacaatttaacaacaacatagcataattcaaccaattgag 8998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 43 - 207
Target Start/End: Complemental strand, 253271 - 253106
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| ||||||||| |||||||   ||| || |||||||||||||||||||||||| ||||||||||||||  | |||||| ||||| |    
T  253271 atttcacaaaaccaccaacaacaatccatttctcatcaagaaatcatgaatcatgcaaacccaagccttgaattatcatcaacaacatgacttaacaaaa 253172  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    |||||||| |||||||||||||| ||||| |||||| ||||||| | |||| ||||||||||||||    
T  253171 acaacaacaattgatcatgaaacttatcacaattcaacaacaacaaagcatgattcaccaattgag 253106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 89 - 207
Target Start/End: Original strand, 14889 - 15004
Alignment:
Q  89 gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccat 188  Q
    |||| ||||||||||||||||||||||||||||||  | |||||||||||   |||||||| |||||||||||||||||||| |||||||||||||| ||    
T  14889 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaaca---acaacaacaattgatcatgaaacatatcacaattcatcaacaacaat 14985  T
Q  189 gcataattcaccaattgag 207  Q
    |||||||||||||||||||    
T  14986 gcataattcaccaattgag 15004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 14229 - 14288
Alignment:
Q  89 gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 148  Q
    |||| ||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  14229 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaa 14288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 207
Target Start/End: Complemental strand, 7083 - 6962
Alignment:
Q  89 gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaacca---ttgatcatgaaacatatcaaaattcatcaacaac 185  Q
    |||| ||||||||||||||||||||||||||||||  | |||||||||||||||||||||| |   ||||||||||||| ||||| ||||||||||||||    
T  7083 gaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaacaac 6984  T
Q  186 catgcataattcaccaattgag 207  Q
     |||||||||||||||||||||    
T  6983 aatgcataattcaccaattgag 6962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 1060 - 939
Alignment:
Q  86 catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||  | ||||||||||||| |||||||||||||| ||||| || ||||||| |||    
T  1060 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacaacaattgatcatgaaacttatcacaaatcatcaataac 961  T
Q  186 catgcataattcaccaattgag 207  Q
     |||||||||||||||||||||    
T  960 aatgcataattcaccaattgag 939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 39 - 207
Target Start/End: Complemental strand, 15761 - 15588
Alignment:
Q  39 acccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 136  Q
    ||||||||| || ||||||  |||||||||| ||||||  |||| || | |||||||||||| ||||||||||||||||| |||| |  | |||||||||    
T  15761 acccattttcaccaaaccaacaacaacaatttatttctcaacaaaaaattatgaatcatgcatacccaagccatgaattagcatctataacatgactaaa 15662  T
Q  137 caacaacaacaacca---ttgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    ||||||||||||| |   ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  15661 caacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgag 15588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 1223 - 1097
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||  |  | || ||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||    
T  1223 atgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 1124  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  1123 atgcataattcaccaattgagcataat 1097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 17649 - 17523
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||||||||| ||||| |||||||||||||||    
T  17649 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacc 17550  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  17549 atgcataattcaccaattgagcataat 17523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 204
Target Start/End: Complemental strand, 109736 - 109582
Alignment:
Q  51 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 149  Q
    ||||||| |||||||  ||||||||  ||||||| ||||||||||||||| |||||||||||||||||||||||  | |||||| | ||||||||||| |    
T  109736 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaatcccaagccatgaattatcatcaacaacatgacttagcaacaacaacatc 109637  T
Q  150 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 204  Q
     |||||||||||||| ||||| ||||||||||||||   ||||||||||||||||    
T  109636 aattgatcatgaaacttatcacaattcatcaacaacttagcataattcaccaatt 109582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 206
Target Start/End: Complemental strand, 118237 - 118081
Alignment:
Q  51 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 149  Q
    ||||||| |||||||  ||||||||  ||||||| ||||||||||||||| |||||||||||||||||||||||  | |||||| | ||||||||||| |    
T  118237 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaccccaagccatgaattatcatcaacaacatgacttagcaacaacaacatc 118138  T
Q  150 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattga 206  Q
     | |||||||||||| ||||| ||||||||||||||   ||||||||||||||||||    
T  118137 aactgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattga 118081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 55591 - 55717
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||||||||| ||||| |||||||||||||||    
T  55591 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacc 55690  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  55691 atgcataattcaccaattgagcataat 55717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 38307 - 38428
Alignment:
Q  86 catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    |||||||||||||||||||||  |||||||||||||||  | |||||||||||||||||||  | |||||||||||||| ||||| ||||||||||||||    
T  38307 catgaatcatgcaaacccaagttatgaattatcatcaacaacatgactaaacaacaacaacgtcaattgatcatgaaacttatcacaattcatcaacaac 38406  T
Q  186 catgcataattcaccaattgag 207  Q
     ||||||||||| |||||||||    
T  38407 aatgcataattcgccaattgag 38428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 83 - 204
Target Start/End: Original strand, 85338 - 85459
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    ||||||||||||||||||||||| |||||||||||||||||  | |||||| | ||||||||||| | |||||||||||||| ||||| |||||||||||    
T  85338 aatcatgaatcatgcaaacccaaaccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaac 85437  T
Q  183 aaccatgcataattcaccaatt 204  Q
    ||||  ||||||||||||||||    
T  85438 aacctagcataattcaccaatt 85459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 51 - 213
Target Start/End: Original strand, 159275 - 159436
Alignment:
Q  51 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 149  Q
    ||||||| |||||||  ||||||||  ||||||| |||||||||||||| ||||||||||  |||||||||||   | || ||| | ||||||||||| |    
T  159275 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcatacccaagccaaaaattatcatca---acatcacttagcaacaacaacatc 159371  T
Q  150 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattc-accaattgagtataat 213  Q
     |||||||||||||| ||||| |||||| || ||||   ||||||||| |||||||||| |||||    
T  159372 aattgatcatgaaacttatcacaattcaacatcaacatagcataattcaaccaattgagcataat 159436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 255052 - 254931
Alignment:
Q  86 catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    |||||||||||||||| |||||||||||||||||||||  | |||||  | ||||||||||| | |||||||||||||| ||||| ||||||||||||||    
T  255052 catgaatcatgcaaactcaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaac 254953  T
Q  186 catgcataattcaccaattgag 207  Q
     |||||||||||||||||||||    
T  254952 aatgcataattcaccaattgag 254931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 261658 - 261537
Alignment:
Q  86 catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 185  Q
    |||||||||||||||| |||||||||||||||||||||  | |||||  | ||||||||||| | |||||||||||||| ||||| ||||||||||||||    
T  261658 catgaatcatgcaaactcaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaac 261559  T
Q  186 catgcataattcaccaattgag 207  Q
     |||||||||||||||||||||    
T  261558 aatgcataattcaccaattgag 261537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 44 - 207
Target Start/End: Original strand, 9903 - 10067
Alignment:
Q  44 ttttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 142  Q
    |||||| ||| ||| |||||||  ||||||||  ||||||| |||||||||||||||||||||||||||||| ||||||||  | |||||  | ||||||    
T  9903 ttttaccaaaacaccaacaacatctcatttctccacaacaaatcatgaatcatgcaaacccaagccatgaataatcatcaacaacatgacatatcaacaa 10002  T
Q  143 caacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    ||||| | |||||||||||||| ||||| |||||| ||||||| | |||||||||||||||||||    
T  10003 caacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgag 10067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 207
Target Start/End: Complemental strand, 842 - 693
Alignment:
Q  59 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    |||||||  ||||||||  ||||||| ||||||||||||| |||||||||||||||||||||||||  | |||||| | ||||||||||| | |||||||    
T  842 aacaacatctcatttctcaacaacaaatcatgaatcatgccaacccaagccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgatc 743  T
Q  158 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    ||||||| ||||| ||||||||||||||   |||||||||||||| ||||    
T  742 atgaaacttatcacaattcatcaacaacatagcataattcaccaaatgag 693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 6788 - 6662
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||| | | ||||||||| |||| ||||| |||||||||||||||    
T  6788 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaagatctattgatcatcaaacttatcacaattcatcaacaacc 6689  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  6688 atgcataattcaccaattgagcataat 6662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 186770 - 186645
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||||||||||||||| || | ||||||||||    
T  186770 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaa-taatcaacaacc 186672  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  186671 atgcataattcaccaattgagcataat 186645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 193732 - 193607
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||||||||||||||| || | ||||||||||    
T  193732 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaa-taatcaacaacc 193634  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  193633 atgcataattcaccaattgagcataat 193607  T

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Target: scaffold0465 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 10211 - 10094
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| |||||||||||||||| ||||| |||||||||||||||    
T  10211 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatccattgatcatgaaacttatcacaattcatcaacaacc 10112  T
Q  187 atgcataattcaccaatt 204  Q
    | ||||||||| ||||||    
T  10111 aagcataattcgccaatt 10094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 83 - 204
Target Start/End: Original strand, 1323 - 1444
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||||||||||||||||||||||||| ||||||||  | |||||  | ||||||||||| | |||||||||||||| ||||| |||||| ||||    
T  1323 aatcatgaatcatgcaaacccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaac 1422  T
Q  183 aaccatgcataattcaccaatt 204  Q
    ||| | ||||||||||||||||    
T  1423 aacaaagcataattcaccaatt 1444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 11876 - 11771
Alignment:
Q  99 aacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattca 198  Q
    |||||||||||||||||||||||||  | |||||| ||||||||||||||   ||||||||||||| | ||| |||||||||||||| ||||||||||||    
T  11876 aacccaagccatgaattatcatcaacaacatgacttaacaacaacaacaa---ttgatcatgaaacttttcacaattcatcaacaacaatgcataattca 11780  T
Q  199 ccaattgag 207  Q
    | |||||||    
T  11779 ctaattgag 11771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 51 - 207
Target Start/End: Original strand, 8960 - 9117
Alignment:
Q  51 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 149  Q
    ||||||| |||||||  ||||||||  ||||||| |||||||||| ||||||||||||||||||||||||||||  | |||||| | ||||||||||| |    
T  8960 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcaagcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacaacatc 9059  T
Q  150 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
     | ||||| |||||| ||||| || |||||||||||   |||||||||||||||||||    
T  9060 aagtgatcttgaaacttatcacaaatcatcaacaacatagcataattcaccaattgag 9117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 59 - 207
Target Start/End: Complemental strand, 784 - 635
Alignment:
Q  59 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    |||||||  ||||||||  ||||||| ||||||||||||| |||||||||||||||||||||||||  | |||||| |  |||||||||| | |||||||    
T  784 aacaacatctcatttctcaacaacaaatcatgaatcatgccaacccaagccatgaattatcatcaacaacatgacttagtaacaacaacatcaattgatc 685  T
Q  158 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    ||||||| ||||| ||||||||||||||   |||||||||||||| ||||    
T  684 atgaaacttatcacaattcatcaacaacatagcataattcaccaaatgag 635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 9752 - 9626
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||| |  |  | ||| ||||||||||||| | |||||||||||||| ||||| |||||||||||||||    
T  9752 atgaatcatgcatacccaagccatgaattagcatccataacgtcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacc 9653  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    |||||||| |||| ||||||| |||||    
T  9652 atgcataagtcactaattgagcataat 9626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 94985 - 95111
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| |||||| |||||||||| |||| |  | || ||| | ||||||||||| | |||||||||||||| ||||| |||||||||||||||    
T  94985 atgaatcatgcatacccaaaccatgaattagcatccataacatcacttatcaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacc 95084  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||| ||||||| |||||    
T  95085 atgcataattcactaattgagcataat 95111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 24965 - 24845
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||| | |||||||||| |||||| |||| |  | || ||| ||||||||||||| | |||||||||||||| ||||| ||||||||||||||     
T  24965 atgaatcatgaatacccaagccaagaattaacatccataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaaca 24866  T
Q  187 atgcataattcaccaattgag 207  Q
      |||||||||||||||||||    
T  24865 tagcataattcaccaattgag 24845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 207
Target Start/End: Original strand, 2 - 151
Alignment:
Q  59 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    ||||||||| |||||||  ||||||| | ||||| |||||||||||||||||||||||||||||||  | |||||  | ||||||||||| | |||||||    
T  2 aacaacaatccatttctcaacaacaaataatgaaacatgcaaacccaagccatgaattatcatcaacaagatgacatagcaacaacaacatcaattgatc 101  T
Q  158 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    ||||||| ||||| ||||||||||| ||   ||||||||||| |||||||    
T  102 atgaaacttatcacaattcatcaaccacgtagcataattcacgaattgag 151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 147
Target Start/End: Original strand, 3492 - 3589
Alignment:
Q  51 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaaca 147  Q
    ||||||| ||||||| | |||||||  ||||||| | ||||| |||||||||||||||||||||||||||||||  | |||||  | |||||||||||    
T  3492 aaaccaccaacaacattccatttctcaacaacaaataatgaaacatgcaaacccaagccatgaattatcatcaacaagatgacatagcaacaacaaca 3589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 146611 - 146731
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| ||||||||||||||||| |||  |  | || ||| ||||||||||||| | |||||||||||||| ||||| |||||||||||||||    
T  146611 atgaatcatgcatacccaagccatgaattaacatgcataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacc 146710  T
Q  187 atgcataattcaccaattgag 207  Q
      |||||||||||||||||||    
T  146711 tagcataattcaccaattgag 146731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 60; Significance: 9e-26; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 28466 - 28573
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattcatttcttgacaa-caatcatgaatcatgcaaacccaag 106  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||   |||  |||||||||| ||| | |||||||    
T  28466 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaccaataaatcatgaattatgaacacccaag 28565  T
Q  107 ccatgaat 114  Q
    ||||||||    
T  28566 ccatgaat 28573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 21637 - 21686
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccac 57  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21637 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccac 21686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 60; Significance: 9e-26; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 59 - 207
Target Start/End: Complemental strand, 112808 - 112662
Alignment:
Q  59 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 157  Q
    |||||||  ||||||||  ||||||| ||||||||||||||||||||||||||||||||||| ||   | |||||| |||||||||||||   |||||||    
T  112808 aacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcaaca---acatgacttaacaacaacaacataaattgatc 112712  T
Q  158 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    ||||||| ||||| ||||||||||| ||   ||||||||||| |||||||    
T  112711 atgaaacttatcacaattcatcaaccacatagcataattcactaattgag 112662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 109596 - 109698
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    ||||||||||| |||| ||||||||||||||||||||||||  | || ||| | ||||||||||| | | |||||||||| | ||||| |||||| ||||    
T  109596 aatcatgaatcgtgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaactgatcatgaatcttatcacaattcaacaac 109695  T
Q  183 aac 185  Q
    |||    
T  109696 aac 109698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 103211 - 103123
Alignment:
Q  36 tcaacccattttacaaaaccactaacaacaattcatttcttgacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaa 123  Q
    |||||||||||||||||  ||| |||||||| |||||| |   ||||||| ||||||| ||||| |||||| |||||||||||||||||    
T  103211 tcaacccattttacaaagtcaccaacaacaactcatttatcaccaacaattcatgaattatgcacacccaaaccatgaattatcatcaa 103123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 204
Target Start/End: Original strand, 4906 - 5068
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| ||||||||| |||||||   || ||| |||||||| ||| | | ||||||||||||||||||||||  | |||||| | |||||    
T  4906 atttcacaaaaccaccaacaacaatccatttctcatcagcaaatcatgaattatgaacaaccaagccatgaattatcatcaacaacatgacttagcaaca 5005  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 204  Q
    |||||| | |||||||||||||| ||||| |||||| ||||||| |  |||||||||||||||    
T  5006 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaaatcataattcaccaatt 5068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 48154 - 48277
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||| |||||| |||||||||||||||||||||||  | ||| || |||||||| || ||| |||||||||||||| | ||| |||||||||||    
T  48154 aatcatgaattatgcaa-cccaagccatgaattatcatcaacaacatggcttaacaacaataataacaattgatcatgaaacttttcacaattcatcaac 48252  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| |  ||||||||||||||||||    
T  48253 aacaaaacataattcaccaattgag 48277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 61602 - 61725
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||| |||||| |||||||||||||||||||||||  | ||| || |||||||| || ||| |||||||||||||| | ||| |||||||||||    
T  61602 aatcatgaattatgcaa-cccaagccatgaattatcatcaacaacatggcttaacaacaataataacaattgatcatgaaacttttcacaattcatcaac 61700  T
Q  183 aaccatgcataattcaccaattgag 207  Q
    ||| |  ||||||||||||||||||    
T  61701 aacaaaacataattcaccaattgag 61725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 181
Target Start/End: Original strand, 1332 - 1485
Alignment:
Q  30 tcattatcaacccatttt-acaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 127  Q
    |||| ||||||||||||| || ||| ||| |||||||  ||||||||  ||||||| |||||||||||||||||||||||||||| ||||||||||  |     
T  1332 tcataatcaacccattttcaccaaaacaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgatttatcatcaacaac 1431  T
Q  128 atgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaa 181  Q
    |||||  | ||||| |||||   |||||||||||||| ||||| ||||||||||    
T  1432 atgacatagcaacagcaacatttattgatcatgaaacttatcacaattcatcaa 1485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 11809 - 11688
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||| ||||||||||||| ||||||||||||||||  | |||||  | |||||||||||   ||||||||||||||  |||| |||||| ||||    
T  11809 aatcatgaattatgcaaacccaagtcatgaattatcatcaacaacatgacatatcaacaacaacataaattgatcatgaaactgatcacaattcaacaac 11710  T
Q  183 aaccatgcataattcaccaatt 204  Q
    ||| | ||||||||||||||||    
T  11709 aacaaagcataattcaccaatt 11688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 204
Target Start/End: Original strand, 33668 - 33789
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    |||||||||| ||| | |||| |||||||||| |||| |||  |||| ||| | ||||||||||| | |||||||||||||| |||||||||||||||||    
T  33668 aatcatgaattatgaacaccctagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgatcatgaaacttatcaaaattcatcaac 33767  T
Q  183 aaccatgcataattcaccaatt 204  Q
    |||   ||||||||||||||||    
T  33768 aacatagcataattcaccaatt 33789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 273 - 147
Alignment:
Q  87 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 186  Q
    |||||||||||| || |||||||||||||| |||| |  | || ||| |||||||||||||   |||||||||||||| ||||| ||||||||||  |      
T  273 atgaatcatgcatactcaagccatgaattagcatccataacatcacttaacaacaacaacatttattgatcatgaaacttatcataattcatcaattatt 174  T
Q  187 atgcataattcaccaattgagtataat 213  Q
    ||||||||||||||||||||| |||||    
T  173 atgcataattcaccaattgagcataat 147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 24471 - 24372
Alignment:
Q  51 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 149  Q
    ||||||| ||||||||| |||||||  ||||||| |||||||||||||||||||||| ||||||||||||||||  | |||||  | |||||||||||||    
T  24471 aaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagacatgaattatcatcaacaacatgacatagcaacaacaacaac 24372  T

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Target: scaffold0028 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 130486 - 130569
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccactaacaacaattca-tttcttgacaacaatcatga 90  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||||||| |||||||| ||| |||||  |||||||||||||    
T  130486 acatcatcaaaatcaaacttcttctttattaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatga 130569  T

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Target: scaffold0028; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 89655 - 89586
Alignment:
Q  138 aacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 207  Q
    |||||||||| | |||| ||||||||| ||||| |||| | ||||||| | |||||||||||||||||||    
T  89655 aacaacaacatcaattgttcatgaaacttatcacaatttaacaacaacaaagcataattcaccaattgag 89586  T

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Target: scaffold0554 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 51 - 162
Target Start/End: Original strand, 1889 - 2001
Alignment:
Q  51 aaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 149  Q
    |||||||||||||||  ||||||||  ||||||| |||||||||||||| || ||||||| ||||||||||||   | |||||| | ||||||||||| |    
T  1889 aaaccactaacaacatctcatttctcaacaacaaatcatgaatcatgcatactcaagccaagaattatcatcatcaacatgacttagcaacaacaacatc 1988  T
Q  150 cattgatcatgaa 162  Q
     ||||||||||||    
T  1989 aattgatcatgaa 2001  T

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Target: scaffold0740 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 4351 - 4414
Alignment:
Q  143 caacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattga 206  Q
    ||||||| ||||||||| |||| ||||| |||||||||||||| ||||||||||||||||||||    
T  4351 caacaacaattgatcataaaacttatcacaattcatcaacaacaatgcataattcaccaattga 4414  T

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Target: scaffold0095 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 198
Target Start/End: Complemental strand, 34008 - 33854
Alignment:
Q  44 ttttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 142  Q
    |||||| |||| || |||||||  ||||||||  ||||||| |||| ||||||||| |||||||||||||||||| |||||  | || ||| | ||||||    
T  34008 ttttaccaaactaccaacaacatctcatttctcaacaacaaatcat-aatcatgcatacccaagccatgaattattatcaacaacatcacttagcaacaa 33910  T
Q  143 caacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattca 198  Q
    ||||| | |||||||||||| | ||||| |||||| |||||||   ||||||||||    
T  33909 caacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattca 33854  T

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Target: scaffold0031 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 31010 - 31149
Alignment:
Q  44 ttttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 142  Q
    |||||| ||| ||| |||||||  ||||||||  ||||||| |||||||||||||| ||||||||||| ||||||||||||| |  | ||  | || |||    
T  31010 ttttaccaaaacaccaacaacatctcatttctcaacaacaagtcatgaatcatgcatacccaagccataaattatcatcaaaaacctcacatatcagcaa 31109  T
Q  143 caacaaccattgatcatgaaacatatcaaaattcatcaac 182  Q
    ||||| | ||| |||||||||| ||||| |||||| ||||    
T  31110 caacatcaattaatcatgaaacttatcacaattcaacaac 31149  T

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Target: scaffold0031; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 97487 - 97403
Alignment:
Q  36 tcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatca 119  Q
    ||||||||||||||||||||| ||||||||| ||| |||||  || | |||||||| | ||| ||||||||| ||||||| ||||    
T  97487 tcaacccattttacaaaaccaataacaacaactcaattcttatcatcaaatcatgatttatgaaaacccaaggcatgaatcatca 97403  T

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Target: scaffold0031; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 70676 - 70734
Alignment:
Q  140 caacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattca 198  Q
    |||||||| | |||||||||||||| ||||| |||||| ||||||| | ||||||||||    
T  70676 caacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattca 70734  T

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Target: scaffold0231 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 13048 - 12992
Alignment:
Q  11 tcatcaaattcaaacttcttcattatcaacccatttt-acaaaaccactaacaacaa 66  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||  ||||||||    
T  13048 tcatcaaaatcaaacttcttcattatcaacccattttcacaaaaccatcaacaacaa 12992  T

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Target: scaffold0092 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 177
Target Start/End: Original strand, 3325 - 3419
Alignment:
Q  83 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattca 177  Q
    |||||||||||||||| ||||||||||||||||| |||| |  | || ||| | ||||| ||||| | |||||||||||| | ||||| ||||||    
T  3325 aatcatgaatcatgcatacccaagccatgaattaacatccacaacatcacttagcaacatcaacatcaattgatcatgaatcttatcacaattca 3419  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 204
Target Start/End: Complemental strand, 77129 - 76967
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 141  Q
    |||| |||||||||| |||||||| ||||||||   |||||| |||||||| ||| | ||||||||||||||| ||||  ||  |||| ||| | |||||    
T  77129 atttcacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaataacaatatcacttagcaaca 77030  T
Q  142 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 204  Q
    |||||| | ||||| |||||| |  | || |||||| |||||||   |||||||||| |||||    
T  77029 acaacatcaattgaacatgaatctcaccacaattcaacaacaacatagcataattcaacaatt 76967  T

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Target: scaffold0080 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 147
Target Start/End: Complemental strand, 44087 - 43975
Alignment:
Q  36 tcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 134  Q
    |||||||||||||||||||||  |||||||| ||||||||   || | |||||||| | ||| | ||||||||||||||| |||| |||  |||| |||     
T  44087 tcaacccattttacaaaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 43988  T
Q  135 aacaacaacaaca 147  Q
    | |||||||||||    
T  43987 agcaacaacaaca 43975  T

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Target: scaffold0017 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 12694 - 12734
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaacccatttta 48  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  12694 acatcatcaaaatcaaacttcttcactatcaacccatttta 12734  T

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Target: scaffold1272 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 161
Target Start/End: Original strand, 270 - 393
Alignment:
Q  39 acccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaac 137  Q
    ||||| ||||||||||||| |||||||| ||||||||   |||| |||||||||| |||   ||||||| ||||||| |||| |||| | || ||| | |    
T  270 acccagtttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgagcacccaaggcatgaataatcaacaaaaacatcacttagc 369  T
Q  138 aacaacaacaaccattgatcatga 161  Q
    |||||||||| | ||||| |||||    
T  370 aacaacaacatcaattgaacatga 393  T

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Target: scaffold0700 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 198
Target Start/End: Original strand, 2483 - 2646
Alignment:
Q  36 tcaacccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 134  Q
    ||||||||||||| |||||||  |||||||| ||||||||   || | |||||||| | ||| | |||||| |||||||| |||| |||  |||| |||     
T  2483 tcaacccattttagaaaaccaacaacaacaagtcatttctcatcatcaaatcatgatttatgaacacccaaaccatgaatcatcaacaacaatatcactt 2582  T
Q  135 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattca 198  Q
    | ||||||||||| | ||||| |||||| |  |||| |||||| |||||||   ||||||||||    
T  2583 agcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaacatagcataattca 2646  T

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Target: scaffold0589 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 7815 - 7878
Alignment:
Q  59 aacaacaattcatttcttgacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatc 121  Q
    |||||||  ||||||||  ||||||| |||||||||||||| ||||||||||||||||| ||||    
T  7815 aacaacatctcatttctcaacaacaaatcatgaatcatgcatacccaagccatgaattaacatc 7878  T

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Target: scaffold0090 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 43
Target Start/End: Complemental strand, 3427 - 3392
Alignment:
Q  8 acatcatcaaattcaaacttcttcattatcaaccca 43  Q
    ||||||||||| ||||||||||||||||||||||||    
T  3427 acatcatcaaaatcaaacttcttcattatcaaccca 3392  T

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Target: scaffold1734 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1734
Description:

Target: scaffold1734; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 1364 - 1422
Alignment:
Q  43 attttacaaaaccactaacaacaattcatttcttgacaacaa-tcatgaatcatgcaaa 100  Q
    |||| |||||||||| ||||||||| |||||||  ||||||| ||||||||||||||||    
T  1364 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaa 1422  T

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Target: scaffold0483 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 6622 - 6708
Alignment:
Q  39 acccattttacaaaaccactaacaacaattcatttcttgacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaa 124  Q
    ||||| ||||||||||||| |||||||| ||||||||   |||| |||||||||| |||   ||||||||||||||| |||| ||||    
T  6622 acccagtttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaccacccaagccatgaatcatcaacaaa 6708  T

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