View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7078_high_1 (Length: 804)

Name: NF7078_high_1
Description: NF7078
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7078_high_1
NF7078_high_1
[»] chr4 (19 HSPs)
chr4 (121-793)||(22054918-22055606)
chr4 (465-546)||(17729420-17729500)
chr4 (465-540)||(23225859-23225933)
chr4 (463-546)||(43722757-43722839)
chr4 (468-546)||(8027384-8027461)
chr4 (463-545)||(8415483-8415564)
chr4 (465-542)||(4916149-4916225)
chr4 (463-543)||(21318243-21318322)
chr4 (499-546)||(18903745-18903791)
chr4 (463-546)||(54500561-54500643)
chr4 (464-546)||(7230273-7230354)
chr4 (464-518)||(8494980-8495034)
chr4 (464-546)||(11949750-11949831)
chr4 (464-546)||(42845018-42845099)
chr4 (465-543)||(43034332-43034409)
chr4 (470-511)||(5179909-5179950)
chr4 (464-521)||(5360291-5360348)
chr4 (464-521)||(33900735-33900792)
chr4 (466-515)||(39842029-39842078)
[»] chr8 (8 HSPs)
chr8 (465-546)||(44293569-44293649)
chr8 (464-546)||(29376894-29376975)
chr8 (464-533)||(33373752-33373820)
chr8 (464-546)||(7996933-7997014)
chr8 (469-523)||(15188897-15188951)
chr8 (465-546)||(18533663-18533743)
chr8 (465-546)||(19163523-19163603)
chr8 (464-533)||(39821877-39821945)
[»] chr3 (15 HSPs)
chr3 (465-546)||(7464478-7464558)
chr3 (463-546)||(8127455-8127537)
chr3 (468-546)||(2186414-2186491)
chr3 (464-523)||(17588355-17588414)
chr3 (468-542)||(41442918-41442990)
chr3 (470-546)||(10922295-10922370)
chr3 (471-546)||(25441487-25441561)
chr3 (464-515)||(53633634-53633685)
chr3 (464-546)||(1149056-1149137)
chr3 (464-546)||(21160045-21160125)
chr3 (464-546)||(33633305-33633386)
chr3 (464-546)||(51882187-51882268)
chr3 (470-504)||(54897319-54897353)
chr3 (466-511)||(11436502-11436547)
chr3 (463-496)||(51250269-51250302)
[»] chr5 (14 HSPs)
chr5 (465-545)||(36321481-36321561)
chr5 (470-546)||(11647196-11647271)
chr5 (468-546)||(11318182-11318260)
chr5 (470-546)||(16579361-16579436)
chr5 (499-546)||(1809072-1809118)
chr5 (464-523)||(3389155-3389214)
chr5 (464-543)||(6489000-6489078)
chr5 (464-546)||(5614758-5614838)
chr5 (465-543)||(15889405-15889482)
chr5 (465-543)||(29695009-29695086)
chr5 (464-546)||(37932323-37932404)
chr5 (464-517)||(689540-689593)
chr5 (469-546)||(11310438-11310514)
chr5 (463-496)||(40837939-40837972)
[»] chr1 (13 HSPs)
chr1 (465-546)||(8269355-8269435)
chr1 (462-546)||(14768797-14768881)
chr1 (463-515)||(30678830-30678882)
chr1 (462-522)||(52267755-52267815)
chr1 (463-546)||(1091171-1091253)
chr1 (468-531)||(3509942-3510005)
chr1 (464-546)||(6219850-6219930)
chr1 (464-511)||(31061924-31061971)
chr1 (464-546)||(1794589-1794670)
chr1 (464-514)||(18521240-18521290)
chr1 (465-523)||(30798756-30798814)
chr1 (469-546)||(29042535-29042611)
chr1 (465-546)||(33153867-33153947)
[»] chr7 (11 HSPs)
chr7 (463-546)||(7388026-7388108)
chr7 (464-546)||(37930037-37930118)
chr7 (465-542)||(5526719-5526795)
chr7 (463-540)||(34448603-34448679)
chr7 (464-543)||(5579686-5579764)
chr7 (464-543)||(27833391-27833469)
chr7 (465-523)||(7872757-7872815)
chr7 (465-495)||(35571970-35572000)
chr7 (465-543)||(40187626-40187703)
chr7 (468-546)||(44651498-44651575)
chr7 (464-537)||(46220947-46221018)
[»] chr6 (9 HSPs)
chr6 (464-546)||(9977050-9977131)
chr6 (464-544)||(788859-788938)
chr6 (464-515)||(9987074-9987125)
chr6 (464-511)||(20208112-20208159)
chr6 (464-511)||(22102135-22102182)
chr6 (464-546)||(8138445-8138526)
chr6 (466-540)||(20744133-20744206)
chr6 (465-543)||(27834333-27834410)
chr6 (470-515)||(10497169-10497214)
[»] chr2 (10 HSPs)
chr2 (465-543)||(24592836-24592913)
chr2 (468-546)||(31815874-31815951)
chr2 (465-546)||(2256965-2257045)
chr2 (463-543)||(25561987-25562066)
chr2 (471-546)||(18324881-18324955)
chr2 (467-546)||(27412823-27412901)
chr2 (463-533)||(5676731-5676800)
chr2 (473-539)||(22359007-22359072)
chr2 (465-546)||(9383196-9383276)
chr2 (465-546)||(29798504-29798584)
[»] scaffold0050 (1 HSPs)
scaffold0050 (466-546)||(53367-53446)
[»] scaffold0262 (1 HSPs)
scaffold0262 (465-546)||(15917-15997)


Alignment Details
Target: chr4 (Bit Score: 471; Significance: 0; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 471; E-Value: 0
Query Start/End: Original strand, 121 - 793
Target Start/End: Original strand, 22054918 - 22055606
Alignment:
Q  121 ttagacttcgggttgaacatactagttgtaggtaattgaattagccttctaaggatacagtaatcaaattaattgcatatttaactcaaaatatgatctg 220  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22054918 ttagacttcgggctgaacatactagttgtaggtaattgaattagccttctaaggatacagtaatcaaattaattgcatatttaactcaaaatatgatctg 22055017  T
Q  221 aacaccacactggtcattaacaaaaatcaaaataatgaaaacgacgtccaagatgcaatacacgataacctacactcaaaacca-------------agt 307  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||             |||    
T  22055018 aacaccacactggtcattaacaaaaatcaaaatgatgaaaatgacgtccaagatgcaatacacgataacctacactcaaaaccagtcttaagattaaagt 22055117  T
Q  308 atggtgtttaaatcgtattacaatgaataatgaatggcttgctatatcgttaaccttgagatatatgatataaaactgaattttctcaatagatcataat 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22055118 atggtgtttaaatcgtattacaatgaataatgaatggcttgctatatagttaaccttgagatatatgatataaaactgaattttctcaatagatcataat 22055217  T
Q  408 ttaaattggtcaaaataaaaaggctcatgtgatacaattttaaatttgttattggatgtcctcgtgaacttaactcagttggtaaggaccttgcatacta 507  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| || |||||||||||    
T  22055218 ttaaattggtcaaaataaaaaggctcatgtgatacaattttaaatttgttattgcatgtcctcgtgagcttaactcagttgataaagatcttgcatacta 22055317  T
Q  508 tatgtaagatctgggggttcaaaccctgaccaccacaaannnnnnnngttattgcatccaaacctactattgtattataactattatataattcctctat 607  Q
    |||| |||||| ||||||||||| ||||||||| | |||        ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22055318 tatgcaagatccgggggttcaaatcctgaccacaaaaaa--aaaattgttattgcatccaaacctactatcgtattataactattatataattcctctat 22055415  T
Q  608 agttgaatattattatcaggaacttagtaaacctagttaaatgtatga--taannnnnnnggttttgctgctcac---ttactaatctannnnnnngctt 702  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |         |||||||||||||||   |||||||| ||       ||||    
T  22055416 agttgaatattattatcaggaacttagtaaacctagttaaatgtatgattttttttttttggttttgctgctcactgtttactaatgtatttttttgctt 22055515  T
Q  703 gacattacaccttattatagatgtatgcattaaatttgcagctgcaccttgatatttttatgtcccctcaataacctctcaatgtgatgtc 793  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  22055516 gacattacaccttattatagatgtatgcattaaatttgcagctgcaccttgatatttttatgtcccctcagtaacctctcaatgtaatgtc 22055606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 17729420 - 17729500
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||||||||||||| ||||||||||| | |||||||||| |||||| ||| ||| ||||||||||||| ||||||||||||    
T  17729420 gtcctcgtgaacttagctcagttggtatgaaccttgcataatatatgcaaggtct-ggggttcaaaccccgaccaccacaaa 17729500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 465 - 540
Target Start/End: Original strand, 23225859 - 23225933
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccac 540  Q
    ||||||||||||||||||||||||||| | ||  | |||| |||||| ||||| | ||||||||||||||||||||    
T  23225859 gtcctcgtgaacttaactcagttggtaggaacaattcataatatatgcaagat-tcggggttcaaaccctgaccac 23225933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 43722757 - 43722839
Alignment:
Q  463 atgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||||||||||  ||||||||||||||| ||||  |||||| |||||||||| ||  |||||||||||||| | |||||||||    
T  43722757 atgtcctcgtgagtttaactcagttggtatggacaatgcataatatatgtaaggtc-cggggttcaaaccctaaacaccacaaa 43722839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 468 - 546
Target Start/End: Complemental strand, 8027461 - 8027384
Alignment:
Q  468 ctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||||  ||| |||||||||||||||   |||||| |||||| |||||| |||||||||||||| ||||||||||||    
T  8027461 ctcgtgagtttagctcagttggtaaggataatgcataatatatgcaagatc-gggggttcaaaccccgaccaccacaaa 8027384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 463 - 545
Target Start/End: Complemental strand, 8415564 - 8415483
Alignment:
Q  463 atgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaa 545  Q
    |||||||| ||| ||||| |||||||||| ||||  |||||| |||||||||||||    |||||||||||||||||||||||    
T  8415564 atgtcctcatgagcttaattcagttggtatggacaatgcataatatatgtaagatc-caaggttcaaaccctgaccaccacaa 8415483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 542
Target Start/End: Original strand, 4916149 - 4916225
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccacca 542  Q
    ||||||||||||||| ||||||||||  | ||  |||||| |||||||||||| | ||||||||||||||| ||||||    
T  4916149 gtcctcgtgaacttagctcagttggtttgaacaatgcataatatatgtaagat-ttggggttcaaaccctggccacca 4916225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 543
Target Start/End: Complemental strand, 21318322 - 21318243
Alignment:
Q  463 atgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccac 543  Q
    ||||||||| || |||||||||||||||| ||||  |||||| |||||| ||| |||  |||||||||||| |||||||||    
T  21318322 atgtcctcgcgagcttaactcagttggtagggacaatgcataatatatgcaaggtct-agggttcaaaccccgaccaccac 21318243  T

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Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 499 - 546
Target Start/End: Complemental strand, 18903791 - 18903745
Alignment:
Q  499 tgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  18903791 tgcataatatatgtaaggtctgggg-ttcaaaccctgaccaccacaaa 18903745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 54500561 - 54500643
Alignment:
Q  463 atgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||| ||||||| |||| |||||||||||  |||  |||||| |||||||||| || |||| ||||||| ||||||||||||||    
T  54500561 atgttctcgtgagcttagctcagttggtagagacaatgcataatatatgtaaggtccgggg-ttcaaacactgaccaccacaaa 54500643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 546
Target Start/End: Original strand, 7230273 - 7230354
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||||||||| |||| ||||||||||||||||  |||||| |||||| ||| ||  ||||||||||||  | ||||||||||    
T  7230273 tgtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtc-cggggttcaaacctcggccaccacaaa 7230354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 518
Target Start/End: Original strand, 8494980 - 8495034
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatc 518  Q
    |||||||||||||||| ||||||||||| ||||  |||||| |||||| ||||||    
T  8494980 tgtcctcgtgaacttagctcagttggtagggacaatgcataatatatgcaagatc 8495034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 546
Target Start/End: Complemental strand, 11949831 - 11949750
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||||| ||| |||| ||||||||||| ||||  |||||| |||||| ||| || |||| ||||||||| ||||||||||||    
T  11949831 tgtcctcatgagcttagctcagttggtatggacaatgcataatatatgcaaggtccgggg-ttcaaaccccgaccaccacaaa 11949750  T

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Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 546
Target Start/End: Original strand, 42845018 - 42845099
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||||||||| |||||||||||||| ||||||  |||||| |||||| ||| ||  |||||| |||| | ||||||||||||    
T  42845018 tgtcctcgtgagcttaactcagttggaaaggacaatgcataatatatgcaaggtc-cggggttaaaactccgaccaccacaaa 42845099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 465 - 543
Target Start/End: Complemental strand, 43034409 - 43034332
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccac 543  Q
    |||||||||| |||||||||||||||| ||||  |||||| |||||| ||| ||| | ||||||||||| | |||||||    
T  43034409 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtct-gaggttcaaaccccggccaccac 43034332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 511
Target Start/End: Complemental strand, 5179950 - 5179909
Alignment:
Q  470 cgtgaacttaactcagttggtaaggaccttgcatactatatg 511  Q
    ||||||||||||||||||||||||||  ||||||| ||||||    
T  5179950 cgtgaacttaactcagttggtaaggatattgcatattatatg 5179909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 521
Target Start/End: Complemental strand, 5360348 - 5360291
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgg 521  Q
    ||||| |||||||||||||||||||||||||| | |||||| | |||| ||| |||||    
T  5360348 tgtccccgtgaacttaactcagttggtaaggatcatgcataatgtatgcaaggtctgg 5360291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 521
Target Start/End: Complemental strand, 33900792 - 33900735
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgg 521  Q
    ||||| ||| |||||| ||||||||||||||||  |||||| |||||| |||||||||    
T  33900792 tgtccccgtaaacttatctcagttggtaaggacaatgcataatatatgcaagatctgg 33900735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 39842078 - 39842029
Alignment:
Q  466 tcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaag 515  Q
    ||||||||| ||||||||||||| |||||||  |||||| ||||||||||    
T  39842078 tcctcgtgatcttaactcagttgataaggacaatgcataatatatgtaag 39842029  T

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Target: chr8 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 44293569 - 44293649
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||||||| |||| |||||||||||  |||  |||||| |||||||||||||| ||||||| ||||||||||||||||||    
T  44293569 gtcctcgtgagcttagctcagttggtatagacaatgcataatatatgtaagatct-ggggttcgaaccctgaccaccacaaa 44293649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 464 - 546
Target Start/End: Original strand, 29376894 - 29376975
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||||||||| |||||||||||||||| ||||  ||| || |||||| ||| ||| || |||||||||| ||||||||||||    
T  29376894 tgtcctcgtgagcttaactcagttggtatggacaatgcgtaatatatgcaaggtct-ggagttcaaaccccgaccaccacaaa 29376975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 533
Target Start/End: Complemental strand, 33373820 - 33373752
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccc 533  Q
    ||||||||||| |||||||||||||||| ||||  | |||| |||||||||| ||| |||||||||||||    
T  33373820 tgtcctcgtgaccttaactcagttggtatggacaattcataatatatgtaaggtct-ggggttcaaaccc 33373752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 546
Target Start/End: Original strand, 7996933 - 7997014
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||| |||| |||| ||||||||||| ||||   ||||| |||||| ||| ||||||| ||||||||| ||||||||||||    
T  7996933 tgtccttgtgagcttagctcagttggtatggacaacgcataatatatgcaaggtctgggg-ttcaaaccccgaccaccacaaa 7997014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 469 - 523
Target Start/End: Original strand, 15188897 - 15188951
Alignment:
Q  469 tcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggg 523  Q
    |||||| |||||||||||| ||| ||||  |||||| ||||||||||||||||||    
T  15188897 tcgtgagcttaactcagttagtatggacaatgcataatatatgtaagatctgggg 15188951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 18533663 - 18533743
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||||| | ||| |||||||||||||| ||  |||||| |||||| ||||||  |||||||||||||  |||||||||||    
T  18533663 gtcctcgtaagcttgactcagttggtaagaacaatgcataatatatgcaagatc-cggggttcaaaccccaaccaccacaaa 18533743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 19163603 - 19163523
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||||||| |||| ||||||||||| ||||  |||||| | |||| ||| || |||| ||||||||| ||||||||||||    
T  19163603 gtcctcgtgagcttagctcagttggtatggacaatgcataatttatgcaaggtccgggg-ttcaaaccccgaccaccacaaa 19163523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 533
Target Start/End: Original strand, 39821877 - 39821945
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccc 533  Q
    ||||||||||| |||| ||||||||||| ||||  |||||| |||||| ||| ||| |||||||||||||    
T  39821877 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtct-ggggttcaaaccc 39821945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 7464558 - 7464478
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||||||| |||||||||||||||| ||||  |||||| |||||||||| ||  ||||||||||||| ||||||||||||    
T  7464558 gtcctcgtgagcttaactcagttggtagggacaatgcataatatatgtaaggtc-cggggttcaaaccccgaccaccacaaa 7464478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 8127455 - 8127537
Alignment:
Q  463 atgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||||||||| |||||||||||||||||||||  ||||||  ||||| ||| | | |||||||||||| |||||||||||||    
T  8127455 atgtcctcgtgagcttaactcagttggtaaggacaatgcataaaatatgcaaggt-ttggggttcaaaccatgaccaccacaaa 8127537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 468 - 546
Target Start/End: Complemental strand, 2186491 - 2186414
Alignment:
Q  468 ctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||||||||||||||||||||| ||||  | |||| |||||||||| ||| ||||||||||||| ||||| ||||||    
T  2186491 ctcgtgaacttaactcagttggtatggacaatacataatatatgtaaggtct-ggggttcaaaccccgaccatcacaaa 2186414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 464 - 523
Target Start/End: Original strand, 17588355 - 17588414
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggg 523  Q
    ||||| ||||| |||||||||||||||||||||  |||||| |||||| |||||||||||    
T  17588355 tgtccccgtgagcttaactcagttggtaaggacaatgcataatatatgcaagatctgggg 17588414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 468 - 542
Target Start/End: Complemental strand, 41442990 - 41442918
Alignment:
Q  468 ctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccacca 542  Q
    ||||||||||||||||| |||||||||||  |||||  |||||||||||||  |||||||| | |||||||||||    
T  41442990 ctcgtgaacttaactcaattggtaaggacaatgcattatatatgtaagatc--ggggttcatatcctgaccacca 41442918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 470 - 546
Target Start/End: Complemental strand, 10922370 - 10922295
Alignment:
Q  470 cgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||| |||||||||||||||| ||||  |||||| |||||| ||||||  ||||||||||||| ||| ||||||||    
T  10922370 cgtgagcttaactcagttggtagggacaatgcataatatatgcaagatc-cggggttcaaaccccgactaccacaaa 10922295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 546
Target Start/End: Complemental strand, 25441561 - 25441487
Alignment:
Q  471 gtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||||||| ||||||||||| ||||  |||||| |||||| ||| ||| ||||||||||||| | ||||||||||    
T  25441561 gtgaacttagctcagttggtatggacaatgcataatatatgcaaggtct-ggggttcaaaccccggccaccacaaa 25441487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 515
Target Start/End: Complemental strand, 53633685 - 53633634
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaag 515  Q
    ||||||||||| ||||||||||||||||||||   |||||| ||||||||||    
T  53633685 tgtcctcgtgagcttaactcagttggtaaggataatgcataatatatgtaag 53633634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 546
Target Start/End: Complemental strand, 1149137 - 1149056
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||||||||| |||| ||||||||||||||||  |||||| |||||| ||| |||  |||||| |||||||  |||||||||    
T  1149137 tgtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtct-agggttcgaaccctggacaccacaaa 1149056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 546
Target Start/End: Original strand, 21160045 - 21160125
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||| |||||||||||||||||||| || |||   |||||| |||||||||| || ||||||||||||||  |||||||||||    
T  21160045 tgtcgtcgtgaacttaactcagttgatatggataatgcataatatatgtaaggtc-gggggttcaaaccc-caccaccacaaa 21160125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 546
Target Start/End: Complemental strand, 33633386 - 33633305
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||||||||| |||||||||||| |||  |||  |||||| |||||||||||||  || |||| ||| ||||||||||||||    
T  33633386 tgtcctcgtgagcttaactcagttagtatagacaatgcataatatatgtaagatc-cggagttcgaactctgaccaccacaaa 33633305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 546
Target Start/End: Complemental strand, 51882268 - 51882187
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||| ||||| |||||||||||||||| ||||  |||||| |||||| ||||||   |||||||||||| | ||||||||||    
T  51882268 tgtccccgtgagcttaactcagttggtatggacaatgcataatatatgcaagatc-cagggttcaaaccccggccaccacaaa 51882187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 470 - 504
Target Start/End: Original strand, 54897319 - 54897353
Alignment:
Q  470 cgtgaacttaactcagttggtaaggaccttgcata 504  Q
    ||||||||||||||||||||||||||| |||||||    
T  54897319 cgtgaacttaactcagttggtaaggacattgcata 54897353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 466 - 511
Target Start/End: Original strand, 11436502 - 11436547
Alignment:
Q  466 tcctcgtgaacttaactcagttggtaaggaccttgcatactatatg 511  Q
    |||||||||||||||||||||||||| |||  ||||||| ||||||    
T  11436502 tcctcgtgaacttaactcagttggtagggatattgcatattatatg 11436547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 463 - 496
Target Start/End: Complemental strand, 51250302 - 51250269
Alignment:
Q  463 atgtcctcgtgaacttaactcagttggtaaggac 496  Q
    |||||||||||| |||||||||||||||||||||    
T  51250302 atgtcctcgtgagcttaactcagttggtaaggac 51250269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 465 - 545
Target Start/End: Complemental strand, 36321561 - 36321481
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaa 545  Q
    |||||||||| |||| ||||||||||||||||  |||||| |||||| ||| | ||||||||| |||||| ||||||||||    
T  36321561 gtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtttgggggttcgaaccctaaccaccacaa 36321481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 470 - 546
Target Start/End: Original strand, 11647196 - 11647271
Alignment:
Q  470 cgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||||||||||||||||||||||||  |||||| |||||| ||| | | ||||||| || |||||||||||||||    
T  11647196 cgtgaacttaactcagttggtaaggacaatgcataatatatgcaaggt-ttggggttcgaatcctgaccaccacaaa 11647271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 468 - 546
Target Start/End: Complemental strand, 11318260 - 11318182
Alignment:
Q  468 ctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||||| ||||||||| ||| ||||||   ||||||  |||||| ||||||||||||||||||||  |||||||||||    
T  11318260 ctcgtgagcttaactcaattgataaggataatgcataaaatatgttagatctgggggttcaaaccccaaccaccacaaa 11318182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 470 - 546
Target Start/End: Complemental strand, 16579436 - 16579361
Alignment:
Q  470 cgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||||||||||||||||||| | ||  |||||| |||||| ||| || | || ||||||||||||||||||||||    
T  16579436 cgtgaacttaactcagttggtatgaacaatgcataatatatgcaaggtccgtgg-ttcaaaccctgaccaccacaaa 16579361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 499 - 546
Target Start/End: Original strand, 1809072 - 1809118
Alignment:
Q  499 tgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  1809072 tgcataatatatgtaagatttgggg-ttcaaaccctgaccaccacaaa 1809118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 523
Target Start/End: Original strand, 3389155 - 3389214
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggg 523  Q
    |||| |||||||| |||||||||||||| ||||  |||||| |||||| |||||||||||    
T  3389155 tgtcttcgtgaacataactcagttggtatggacaatgcataatatatgcaagatctgggg 3389214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 543
Target Start/End: Original strand, 6489000 - 6489078
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccac 543  Q
    ||||||||||| |||| ||||||||||| ||||  |||||| |||||| ||| ||| ||||||||||||| | |||||||    
T  6489000 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtct-ggggttcaaaccccggccaccac 6489078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 546
Target Start/End: Original strand, 5614758 - 5614838
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||| |||||||||||||||||||| || |||   |||||| |||||||||| || ||||||||||||||  |||||||||||    
T  5614758 tgtcgtcgtgaacttaactcagttgatatggataatgcataatatatgtaaggtc-gggggttcaaaccc-caccaccacaaa 5614838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 465 - 543
Target Start/End: Original strand, 15889405 - 15889482
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccac 543  Q
    |||||||||| |||| ||||||||||| ||||  |||||| |||||| ||| |||  |||||||||||| |||||||||    
T  15889405 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtct-agggttcaaaccccgaccaccac 15889482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 465 - 543
Target Start/End: Original strand, 29695009 - 29695086
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccac 543  Q
    |||||||||| ||||||||||||| || ||||  |||||| |||||||||| | | | ||||||||||| |||||||||    
T  29695009 gtcctcgtgaccttaactcagttgatatggacaatgcataatatatgtaaggt-tcgtggttcaaaccccgaccaccac 29695086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 546
Target Start/End: Original strand, 37932323 - 37932404
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||||||||| |||| ||||||||||| ||||  |||||| |||||| ||| ||  ||||||| ||||||| ||||||||||    
T  37932323 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtc-cggggttcgaaccctggccaccacaaa 37932404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 517
Target Start/End: Original strand, 689540 - 689593
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagat 517  Q
    ||||||||||||||||||||||||| || ||||  || ||| ||||||||||||    
T  689540 tgtcctcgtgaacttaactcagttgatatggacaatgtataatatatgtaagat 689593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 546
Target Start/End: Complemental strand, 11310514 - 11310438
Alignment:
Q  469 tcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||| |||| ||||||||||  ||||  || ||| |||||| ||||||||||| || |||||||||||||||||||    
T  11310514 tcgtgagcttagctcagttggtttggacaatgtataatatatgcaagatctggggttt-aaaccctgaccaccacaaa 11310438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 463 - 496
Target Start/End: Complemental strand, 40837972 - 40837939
Alignment:
Q  463 atgtcctcgtgaacttaactcagttggtaaggac 496  Q
    ||||||||||||||||||||||||||||| ||||    
T  40837972 atgtcctcgtgaacttaactcagttggtatggac 40837939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000005; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 8269435 - 8269355
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||||||||||||| ||||||||||||||||  | |||| |||||| ||| ||  ||||||||||||| ||||||||||||    
T  8269435 gtcctcgtgaacttagctcagttggtaaggacaatacataatatatgcaaggtc-cggggttcaaaccccgaccaccacaaa 8269355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 14768797 - 14768881
Alignment:
Q  462 gatgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||| ||||||| ||| |||||||||||| ||||  || ||| |||||||||  | | ||||||||||||| ||||||||||||    
T  14768797 gatgttctcgtgagcttgactcagttggtagggacaatgtataatatatgtaaagtttcggggttcaaaccccgaccaccacaaa 14768881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 515
Target Start/End: Complemental strand, 30678882 - 30678830
Alignment:
Q  463 atgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaag 515  Q
    |||||||||||| |||||||||||||||| ||||  |||||| ||||||||||    
T  30678882 atgtcctcgtgagcttaactcagttggtagggacaatgcataatatatgtaag 30678830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 522
Target Start/End: Original strand, 52267755 - 52267815
Alignment:
Q  462 gatgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctggg 522  Q
    ||||||||||||| |||||||||||||||||||||  ||||||  ||||| ||| ||||||    
T  52267755 gatgtcctcgtgagcttaactcagttggtaaggacaatgcataaaatatgcaaggtctggg 52267815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 1091171 - 1091253
Alignment:
Q  463 atgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||||||||| ||||||||||||||||  |||  |||||| | |||| ||| | | ||||||||||| ||||||||||||||    
T  1091171 atgtcctcgtgagcttaactcagttggtatagacaatgcataatgtatgcaaggt-tcggggttcaaactctgaccaccacaaa 1091253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 468 - 531
Target Start/End: Complemental strand, 3510005 - 3509942
Alignment:
Q  468 ctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaac 531  Q
    |||||||||||| ||||||||||| ||||  |||||| |||||| ||| || ||||||||||||    
T  3510005 ctcgtgaacttagctcagttggtatggacaatgcataatatatgcaaggtccgggggttcaaac 3509942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 546
Target Start/End: Complemental strand, 6219930 - 6219850
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||||||||| |||||||| ||||||| ||||  | |||| |||||||||| ||   ||||||||| |||||||||||||||    
T  6219930 tgtcctcgtgagcttaactcggttggtagggacaatacataatatatgtaaggtc--cgggttcaaatcctgaccaccacaaa 6219850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 511
Target Start/End: Complemental strand, 31061971 - 31061924
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatg 511  Q
    ||||||| |||||||||||||||||||||||||  |||||| ||||||    
T  31061971 tgtcctcatgaacttaactcagttggtaaggacaatgcatattatatg 31061924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 546
Target Start/End: Original strand, 1794589 - 1794670
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||||||||| |||| ||||||| ||| ||||  |||||| |||||| ||||||  ||||||||||||  ||||||||||||    
T  1794589 tgtcctcgtgagcttagctcagttagtatggacaatgcataatatatgcaagatc-cggggttcaaacctcgaccaccacaaa 1794670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 514
Target Start/End: Original strand, 18521240 - 18521290
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaa 514  Q
    ||||||||||||||||||||| |||||||||||  |||||| |||| ||||    
T  18521240 tgtcctcgtgaacttaactcaattggtaaggacaatgcataatatacgtaa 18521290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 465 - 523
Target Start/End: Complemental strand, 30798814 - 30798756
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggg 523  Q
    |||||||||| ||||||||| |||| ||||||  |||||| ||||||||||||| ||||    
T  30798814 gtcctcgtgagcttaactcatttggcaaggacaatgcataatatatgtaagatccgggg 30798756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 546
Target Start/End: Original strand, 29042535 - 29042611
Alignment:
Q  469 tcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||| ||||||||||| |||||| |||   |||||| |||||||||||||  |||||||||| || ||||||||||||    
T  29042535 tcgtaaacttaactcaattggtagggataatgcataatatatgtaagatc-cggggttcaaatcccgaccaccacaaa 29042611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 33153947 - 33153867
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||| |||| |||||||||||||||| ||||  |||||| |||||||||| ||  | ||||||||||| || |||||||||    
T  33153947 gtccttgtgagcttaactcagttggtagggacaatgcataatatatgtaaggtc-cgaggttcaaaccccgaacaccacaaa 33153867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000008; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 7388108 - 7388026
Alignment:
Q  463 atgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||||||||| |||||||||||||||  ||||  |||||| |||||||||| | | ||| ||||||||| ||||||||||||    
T  7388108 atgtcctcgtgagcttaactcagttggttgggacaatgcataatatatgtaaggt-tcgggattcaaaccccgaccaccacaaa 7388026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 464 - 546
Target Start/End: Original strand, 37930037 - 37930118
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||||||||| |||| ||||||||||||||||  |||||| |||||| | ||| | ||| ||||||||| ||||||||||||    
T  37930037 tgtcctcgtgagcttatctcagttggtaaggacaatgcataatatatgcaggat-tcgggattcaaaccccgaccaccacaaa 37930118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 542
Target Start/End: Original strand, 5526719 - 5526795
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccacca 542  Q
    |||||||||| |||| ||||||||||| ||||  |||||| ||||| |||||| | ||||||||||||| ||||||||    
T  5526719 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatataagat-ttggggttcaaaccccgaccacca 5526795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 463 - 540
Target Start/End: Complemental strand, 34448679 - 34448603
Alignment:
Q  463 atgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccac 540  Q
    |||||||||||| |||||||||||||||  ||||  |||||| |||||||||| ||   |||||||||||||||||||    
T  34448679 atgtcctcgtgagcttaactcagttggtttggacaatgcataatatatgtaaggtc-cagggttcaaaccctgaccac 34448603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 543
Target Start/End: Original strand, 5579686 - 5579764
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccac 543  Q
    |||||| |||| |||| ||||||||||| ||||  |||||| |||||| ||| ||| ||||||||||||| |||||||||    
T  5579686 tgtccttgtgagcttagctcagttggtagggacagtgcataatatatgcaaggtct-ggggttcaaaccccgaccaccac 5579764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 543
Target Start/End: Complemental strand, 27833469 - 27833391
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccac 543  Q
    ||||||||| | | || ||||||||||||||||  |||||| |||||||||| ||  ||||||||||||| |||||||||    
T  27833469 tgtcctcgtaagcctagctcagttggtaaggacaatgcataatatatgtaaggtc-cggggttcaaaccccgaccaccac 27833391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 465 - 523
Target Start/End: Complemental strand, 7872815 - 7872757
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggg 523  Q
    |||| |||||||||| ||||||||||||||||  |||||| |||||| ||| |||||||    
T  7872815 gtccacgtgaacttagctcagttggtaaggacaatgcataatatatgcaaggtctgggg 7872757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 465 - 495
Target Start/End: Complemental strand, 35572000 - 35571970
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaagga 495  Q
    |||||||||||||||||||||||||||||||    
T  35572000 gtcctcgtgaacttaactcagttggtaagga 35571970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 465 - 543
Target Start/End: Complemental strand, 40187703 - 40187626
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccac 543  Q
    |||||| ||| |||||||||||||||| ||||  |||||| |||||||||| ||| | ||||||||||| || ||||||    
T  40187703 gtcctcatgagcttaactcagttggtagggacaatgcataatatatgtaaggtct-gcggttcaaaccccgaacaccac 40187626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 468 - 546
Target Start/End: Original strand, 44651498 - 44651575
Alignment:
Q  468 ctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||||  ||| ||||||||||| ||||||||||||  ||||||||| | | |||||||||||||  |||||||||||    
T  44651498 ctcgtgagtttagctcagttggtatggaccttgcataaaatatgtaaggt-ttggggttcaaaccccaaccaccacaaa 44651575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 46221018 - 46220947
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgac 537  Q
    |||| |||||| |||||||||||||||| ||||  ||||||  ||||||||| || ||||||||||||||||||    
T  46221018 tgtcttcgtgagcttaactcagttggtatggacaatgcata-aatatgtaaggtc-gggggttcaaaccctgac 46220947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000003; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 464 - 546
Target Start/End: Original strand, 9977050 - 9977131
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||||| ||| ||||||||| |||||| |||   |||||| |||||| ||| ||||||| ||||||||||||||||||||||    
T  9977050 tgtcctcctgagcttaactcaattggtatggataatgcataatatatgcaaggtctgggg-ttcaaaccctgaccaccacaaa 9977131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 464 - 544
Target Start/End: Original strand, 788859 - 788938
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccaca 544  Q
    ||||||||||| |||| ||||||||||||||||  |||||| |||||| ||| | | || |||||||||| ||||||||||    
T  788859 tgtcctcgtgagcttatctcagttggtaaggacaatgcataatatatgcaaggt-tcggagttcaaaccccgaccaccaca 788938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 515
Target Start/End: Original strand, 9987074 - 9987125
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaag 515  Q
    ||||| ||||| |||||||||||||||||||||  |||||| ||||||||||    
T  9987074 tgtccccgtgagcttaactcagttggtaaggacaatgcatattatatgtaag 9987125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 511
Target Start/End: Original strand, 20208112 - 20208159
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatg 511  Q
    ||||| ||| ||||||||||||||||||||||| ||||||| ||||||    
T  20208112 tgtccgcgtaaacttaactcagttggtaaggacattgcatagtatatg 20208159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 511
Target Start/End: Original strand, 22102135 - 22102182
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatg 511  Q
    ||||| ||| ||||||||||||||||||||||| ||||||| ||||||    
T  22102135 tgtccgcgtaaacttaactcagttggtaaggacattgcatagtatatg 22102182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 546
Target Start/End: Complemental strand, 8138526 - 8138445
Alignment:
Q  464 tgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||||||||| ||| |||||||| |||| ||  |||||| |||||||||| ||| ||||||||||||   |||||||||||    
T  8138526 tgtcctcgtgaatttagctcagttgataagaacaatgcataatatatgtaaggtct-ggggttcaaacctcaaccaccacaaa 8138445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 466 - 540
Target Start/End: Original strand, 20744133 - 20744206
Alignment:
Q  466 tcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccac 540  Q
    ||||||||| |||| ||||||||||| ||||  |||||| |||||| ||| ||| ||||||||||||| ||||||    
T  20744133 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtct-ggggttcaaaccccgaccac 20744206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 465 - 543
Target Start/End: Original strand, 27834333 - 27834410
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccac 543  Q
    |||||||||| ||||||||||| |||| ||||   ||||| |||||| ||| ||| ||||||||||||| |||||||||    
T  27834333 gtcctcgtgagcttaactcagtgggtagggacaaggcataatatatgcaaggtct-ggggttcaaacccggaccaccac 27834410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 515
Target Start/End: Complemental strand, 10497214 - 10497169
Alignment:
Q  470 cgtgaacttaactcagttggtaaggaccttgcatactatatgtaag 515  Q
    |||||||||||||||||| ||||||||  |||||| ||||||||||    
T  10497214 cgtgaacttaactcagtttgtaaggacaatgcataatatatgtaag 10497169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000003; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 465 - 543
Target Start/End: Complemental strand, 24592913 - 24592836
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccac 543  Q
    ||||||||||||||| ||||||||||| ||||  |||||| |||||| ||| ||| ||||||||||||| | |||||||    
T  24592913 gtcctcgtgaacttagctcagttggtagggacaatgcataatatatgcaaggtct-ggggttcaaaccccggccaccac 24592836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 468 - 546
Target Start/End: Complemental strand, 31815951 - 31815874
Alignment:
Q  468 ctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||||| |||||||||||||||| ||||  |||||| |||||| ||| ||  ||||||||||||| ||||||||||||    
T  31815951 ctcgtgagcttaactcagttggtagggacaatgcataatatatgcaaggtc-cggggttcaaaccccgaccaccacaaa 31815874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 2256965 - 2257045
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||||||| |||||||||||||||| ||||  |||||| |||||| ||| ||| ||||||| ||||| | ||||||||||    
T  2256965 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtct-ggggttcgaaccccggccaccacaaa 2257045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 543
Target Start/End: Complemental strand, 25562066 - 25561987
Alignment:
Q  463 atgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccac 543  Q
    |||| ||||| |||||| ||||||||||||||||  ||||||  ||||| ||||||| ||||||||||| | |||||||||    
T  25562066 atgttctcgtaaacttagctcagttggtaaggacagtgcataaaatatgcaagatct-ggggttcaaactccgaccaccac 25561987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 546
Target Start/End: Complemental strand, 18324955 - 18324881
Alignment:
Q  471 gtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||| |||||||||||||||||||||  |||||| |||||| |||||||  || ||| |||||||| |||||||||    
T  18324955 gtgagcttaactcagttggtaaggacaatgcataatatatgcaagatct-aggattcgaaccctgaacaccacaaa 18324881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 546
Target Start/End: Complemental strand, 27412901 - 27412823
Alignment:
Q  467 cctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||||| ||||||||||||||||  |||  |||||| |||||||||| ||| |  |||||||||| ||||||||||||    
T  27412901 cctcgtgagcttaactcagttggtagagacaatgcataatatatgtaaggtct-gttgttcaaaccccgaccaccacaaa 27412823  T

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Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 463 - 533
Target Start/End: Original strand, 5676731 - 5676800
Alignment:
Q  463 atgtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccc 533  Q
    |||||||||||| ||||||||||||||||| |||  |||||| |||||| |||   |||||||||||||||    
T  5676731 atgtcctcgtgagcttaactcagttggtaatgacaatgcataatatatgcaag-ggtgggggttcaaaccc 5676800  T

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Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 473 - 539
Target Start/End: Original strand, 22359007 - 22359072
Alignment:
Q  473 gaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgacca 539  Q
    ||||||||||||||||||||||||  |||||| |||||| ||||||  |  ||||||||||||||||    
T  22359007 gaacttaactcagttggtaaggacaatgcataatatatgcaagatc-cgcagttcaaaccctgacca 22359072  T

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Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 9383276 - 9383196
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||||||| |||| ||||||||||| ||||  |||||| |||||| ||| | ||||| ||||| ||||| ||||||||||    
T  9383276 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtttggggtttcaacccctg-ccaccacaaa 9383196  T

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Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 29798584 - 29798504
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||||||| |||||||||||||||| ||||  ||||||  |||| |||| ||  ||||||| ||||| ||||||||||||    
T  29798584 gtcctcgtgagcttaactcagttggtatggacaatgcataaaatatttaaggtc-aggggttcgaaccccgaccaccacaaa 29798504  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 466 - 546
Target Start/End: Complemental strand, 53446 - 53367
Alignment:
Q  466 tcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    ||||||||| |||||||||||||| | ||||  ||||||  ||||| ||| ||||||| ||||||||| ||||||||||||    
T  53446 tcctcgtgagcttaactcagttggaagggacaatgcataaaatatgcaaggtctgggg-ttcaaaccccgaccaccacaaa 53367  T

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Target: scaffold0262 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 15997 - 15917
Alignment:
Q  465 gtcctcgtgaacttaactcagttggtaaggaccttgcatactatatgtaagatctgggggttcaaaccctgaccaccacaaa 546  Q
    |||||||||| ||||||||| |||||||||||  || ||| |||||| ||| ||| |||||||||||||   ||||||||||    
T  15997 gtcctcgtgagcttaactcaattggtaaggacaatgtataatatatgcaaggtct-ggggttcaaaccccagccaccacaaa 15917  T

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