View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7078_low_10 (Length: 259)

Name: NF7078_low_10
Description: NF7078
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7078_low_10
NF7078_low_10
[»] chr1 (27 HSPs)
chr1 (1-235)||(4349467-4349701)
chr1 (209-259)||(34725228-34725278)
chr1 (210-259)||(18944620-18944669)
chr1 (210-259)||(22930199-22930248)
chr1 (208-259)||(14617013-14617064)
chr1 (208-259)||(19932884-19932935)
chr1 (209-252)||(34714599-34714642)
chr1 (212-259)||(40424721-40424768)
chr1 (210-252)||(10668197-10668239)
chr1 (210-259)||(32632688-32632737)
chr1 (210-259)||(45812667-45812716)
chr1 (210-259)||(47214488-47214537)
chr1 (215-259)||(18742093-18742137)
chr1 (210-258)||(46248086-46248134)
chr1 (210-253)||(20004230-20004273)
chr1 (210-253)||(46991781-46991824)
chr1 (209-259)||(8197019-8197069)
chr1 (213-259)||(25290143-25290189)
chr1 (209-259)||(27474257-27474307)
chr1 (209-259)||(41319938-41319988)
chr1 (216-253)||(30395866-30395903)
chr1 (210-259)||(38478412-38478461)
chr1 (215-252)||(45402077-45402114)
chr1 (211-253)||(21723642-21723684)
chr1 (209-259)||(27201623-27201673)
chr1 (210-251)||(10163736-10163777)
chr1 (213-253)||(23768458-23768498)
[»] scaffold0057 (1 HSPs)
scaffold0057 (208-259)||(24899-24950)
[»] chr8 (24 HSPs)
chr8 (208-259)||(2626471-2626522)
chr8 (209-259)||(17823529-17823579)
chr8 (209-259)||(30454227-30454277)
chr8 (210-259)||(12670380-12670429)
chr8 (210-253)||(7136667-7136710)
chr8 (210-253)||(35261633-35261676)
chr8 (208-259)||(39461128-39461179)
chr8 (210-259)||(20869628-20869677)
chr8 (208-253)||(23286431-23286476)
chr8 (210-259)||(24245405-24245454)
chr8 (209-253)||(13160655-13160699)
chr8 (209-253)||(28817764-28817808)
chr8 (209-253)||(36720749-36720793)
chr8 (209-252)||(40605044-40605087)
chr8 (210-253)||(44530103-44530146)
chr8 (208-253)||(25250474-25250519)
chr8 (210-253)||(29521823-29521866)
chr8 (209-259)||(18164891-18164941)
chr8 (219-253)||(28407379-28407413)
chr8 (210-252)||(45071219-45071261)
chr8 (208-253)||(6760775-6760819)
chr8 (214-259)||(20284205-20284250)
chr8 (214-259)||(21070834-21070879)
chr8 (210-247)||(42840863-42840900)
[»] chr7 (30 HSPs)
chr7 (208-259)||(48735253-48735304)
chr7 (209-259)||(32758214-32758264)
chr7 (210-259)||(47077985-47078034)
chr7 (209-253)||(2541158-2541202)
chr7 (207-259)||(42495967-42496019)
chr7 (210-253)||(42798623-42798666)
chr7 (211-253)||(18326989-18327031)
chr7 (207-253)||(35334952-35334998)
chr7 (210-252)||(46354148-46354190)
chr7 (210-259)||(21172139-21172188)
chr7 (210-259)||(22699102-22699151)
chr7 (208-253)||(42805476-42805521)
chr7 (210-259)||(43557426-43557475)
chr7 (211-259)||(5180289-5180337)
chr7 (214-258)||(14732955-14732999)
chr7 (208-252)||(34626346-34626390)
chr7 (221-259)||(19427021-19427059)
chr7 (210-259)||(7193039-7193088)
chr7 (218-259)||(27629596-27629637)
chr7 (209-253)||(42476826-42476870)
chr7 (210-253)||(2663069-2663112)
chr7 (211-253)||(8149084-8149126)
chr7 (217-259)||(10693203-10693245)
chr7 (217-259)||(11617720-11617762)
chr7 (208-250)||(12473256-12473298)
chr7 (213-259)||(25198679-25198725)
chr7 (213-259)||(29140492-29140538)
chr7 (216-253)||(40463837-40463874)
chr7 (210-250)||(21447544-21447584)
chr7 (209-253)||(28078269-28078313)
[»] chr4 (26 HSPs)
chr4 (208-259)||(48598955-48599006)
chr4 (209-259)||(6430757-6430807)
chr4 (209-259)||(20224937-20224987)
chr4 (210-259)||(10660358-10660407)
chr4 (210-259)||(10874503-10874552)
chr4 (210-259)||(23501747-23501796)
chr4 (209-253)||(5648212-5648256)
chr4 (208-259)||(5306795-5306846)
chr4 (209-259)||(14590790-14590840)
chr4 (213-255)||(18969698-18969740)
chr4 (209-259)||(30639333-30639383)
chr4 (210-259)||(11054278-11054327)
chr4 (210-259)||(47528660-47528709)
chr4 (210-255)||(55766602-55766647)
chr4 (213-253)||(16911519-16911559)
chr4 (215-259)||(30352723-30352767)
chr4 (210-253)||(13256535-13256578)
chr4 (210-253)||(20405047-20405090)
chr4 (210-253)||(21646918-21646961)
chr4 (213-259)||(17315430-17315476)
chr4 (210-252)||(55830860-55830902)
chr4 (208-252)||(5313133-5313177)
chr4 (217-253)||(16408741-16408777)
chr4 (208-253)||(29879635-29879680)
chr4 (210-259)||(37494805-37494854)
chr4 (211-259)||(54966977-54967024)
[»] chr3 (25 HSPs)
chr3 (208-259)||(8247821-8247872)
chr3 (210-259)||(10870083-10870132)
chr3 (210-259)||(12914167-12914216)
chr3 (209-253)||(7697023-7697067)
chr3 (209-253)||(16735416-16735460)
chr3 (209-253)||(40272950-40272994)
chr3 (210-253)||(13730742-13730785)
chr3 (210-253)||(46421175-46421218)
chr3 (210-253)||(52926348-52926391)
chr3 (209-259)||(9607178-9607228)
chr3 (208-259)||(1217064-1217115)
chr3 (210-253)||(4495802-4495845)
chr3 (211-253)||(25517311-25517353)
chr3 (211-253)||(29366860-29366902)
chr3 (209-259)||(39203491-39203541)
chr3 (208-249)||(9276248-9276289)
chr3 (210-250)||(6411962-6412002)
chr3 (208-259)||(13628924-13628976)
chr3 (213-253)||(21874999-21875039)
chr3 (209-253)||(22609742-22609785)
chr3 (209-259)||(5173852-5173903)
chr3 (209-242)||(12525385-12525418)
chr3 (214-259)||(22123047-22123092)
chr3 (213-250)||(23871418-23871455)
chr3 (223-259)||(26869696-26869732)
[»] chr5 (18 HSPs)
chr5 (201-259)||(8170114-8170172)
chr5 (209-259)||(38879534-38879584)
chr5 (210-259)||(1565385-1565434)
chr5 (208-253)||(41014271-41014316)
chr5 (210-253)||(24448844-24448887)
chr5 (209-259)||(37024686-37024736)
chr5 (213-259)||(43334159-43334205)
chr5 (210-259)||(35710267-35710316)
chr5 (213-253)||(4619244-4619284)
chr5 (210-253)||(19438703-19438746)
chr5 (211-253)||(2838733-2838775)
chr5 (209-253)||(23974734-23974777)
chr5 (208-248)||(41956884-41956924)
chr5 (209-259)||(22187238-22187288)
chr5 (213-259)||(22861798-22861844)
chr5 (213-259)||(27328709-27328755)
chr5 (215-253)||(31299591-31299629)
chr5 (209-253)||(22600407-22600451)
[»] chr2 (21 HSPs)
chr2 (209-259)||(14530271-14530321)
chr2 (210-259)||(12024050-12024099)
chr2 (209-253)||(25079856-25079900)
chr2 (209-253)||(39189559-39189603)
chr2 (210-253)||(8455454-8455497)
chr2 (212-259)||(17896215-17896262)
chr2 (208-259)||(23397718-23397769)
chr2 (209-259)||(21779391-21779441)
chr2 (212-253)||(11514392-11514433)
chr2 (208-253)||(22371009-22371054)
chr2 (211-259)||(10543653-10543701)
chr2 (211-259)||(14544018-14544066)
chr2 (210-253)||(9671134-9671177)
chr2 (210-253)||(17705449-17705492)
chr2 (212-259)||(19977846-19977893)
chr2 (216-259)||(27573581-27573624)
chr2 (210-259)||(7214488-7214537)
chr2 (208-253)||(25249875-25249920)
chr2 (210-259)||(27466262-27466311)
chr2 (211-258)||(24200758-24200805)
chr2 (210-252)||(26684761-26684803)
[»] scaffold0168 (1 HSPs)
scaffold0168 (210-259)||(30533-30582)
[»] scaffold0024 (1 HSPs)
scaffold0024 (206-259)||(83825-83878)
[»] chr6 (13 HSPs)
chr6 (210-259)||(1346918-1346967)
chr6 (210-259)||(1354887-1354936)
chr6 (208-259)||(8409195-8409246)
chr6 (212-258)||(3815210-3815256)
chr6 (208-253)||(14975218-14975263)
chr6 (214-259)||(20400625-20400670)
chr6 (214-259)||(24734591-24734636)
chr6 (210-258)||(33922961-33923009)
chr6 (210-253)||(1941809-1941852)
chr6 (208-259)||(9161075-9161126)
chr6 (220-259)||(12222049-12222088)
chr6 (210-252)||(15866176-15866218)
chr6 (211-259)||(13905111-13905158)
[»] scaffold0005 (1 HSPs)
scaffold0005 (209-259)||(226538-226588)
[»] scaffold0258 (1 HSPs)
scaffold0258 (212-259)||(13155-13202)
[»] scaffold0187 (4 HSPs)
scaffold0187 (213-259)||(10180-10226)
scaffold0187 (213-259)||(20508-20554)
scaffold0187 (209-258)||(8898-8947)
scaffold0187 (209-258)||(19226-19275)
[»] scaffold0018 (1 HSPs)
scaffold0018 (218-251)||(73001-73034)


Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 4349467 - 4349701
Alignment:
Q  1 tttaagagtgaaactagtaaagccaaacattatgtattaggagtatatcaacataactaacctataaagtaaaaacacctctctaaagtattgtgtcgga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4349467 tttaagagtgaaactagtaaagccaaacattatgtattaggagtatatcaacataactaacctataaagtaaaaacacctctctaaagtattgtgtcgga 4349566  T
Q  101 catgttttggacaccgacacttctcagacacgccttacacatgtgtcagtaacctcttaacagtgtccaatcaatttatatttttgggtcggacacctgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4349567 catgttttggacaccgacacttctcagacacgccttacacatgtgtcagtaacctcttaacagtgtccaatcaatttatatttttgggtcggacacctgt 4349666  T
Q  201 tagacacatgaggggtaaccttggcgcaactggta 235  Q
    |||||||||||||||||||||||||||||||||||    
T  4349667 tagacacatgaggggtaaccttggcgcaactggta 4349701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 34725278 - 34725228
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  34725278 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 34725228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 18944620 - 18944669
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  18944620 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 18944669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 22930248 - 22930199
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  22930248 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 22930199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 14617013 - 14617064
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||| |||||    
T  14617013 atgaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaag 14617064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 19932935 - 19932884
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  19932935 atgaggggttaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 19932884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 34714599 - 34714642
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtga 252  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  34714599 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtga 34714642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 40424721 - 40424768
Alignment:
Q  212 ggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||    
T  40424721 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 40424768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 10668197 - 10668239
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtga 252  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  10668197 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtga 10668239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 32632737 - 32632688
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||| |||||||||||| |||| |||||    
T  32632737 gaggggtaaccttggcgcaactggtaaagttgttgtcatatgactgaaag 32632688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 45812716 - 45812667
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||||||||| || ||||||||||||||||| |||||    
T  45812716 gaggggtaaccttggcgcaactgataaagttgttgtcatgtgactgaaag 45812667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 47214488 - 47214537
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||| ||||||||||||||| ||||||||||||||||| |||||    
T  47214488 gaggggtaactttggcgcaactggtaaagttgttgtcatgtgactgaaag 47214537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 18742137 - 18742093
Alignment:
Q  215 gtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||    
T  18742137 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 18742093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 46248134 - 46248086
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaa 258  Q
    |||||||||||||||| ||||||||| ||||||||||||||||| ||||    
T  46248134 gaggggtaaccttggctcaactggtaaagttgttgtcatgtgactgaaa 46248086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 20004273 - 20004230
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||| |||||||||| |||||||||||||||||    
T  20004273 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgac 20004230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 46991781 - 46991824
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||| |||||||||| |||||||||||||||||    
T  46991781 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgac 46991824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 8197019 - 8197069
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||| |||||||||  ||||||||||||||||| |||||    
T  8197019 tgaggggtaaccttggtgcaactggtcaagttgttgtcatgtgactgaaag 8197069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 25290143 - 25290189
Alignment:
Q  213 gggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||| |||| ||||||||||||||||| |||||    
T  25290143 gggtaaccttggcgcaacaggtaaagttgttgtcatgtgactgaaag 25290189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 27474257 - 27474307
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||| || ||||||||| ||||||||||||||||| |||||    
T  27474257 tgaggggtaaccttagctcaactggtaaagttgttgtcatgtgactgaaag 27474307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 41319988 - 41319938
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||| |||||    
T  41319988 tgaggggtaaccttgacacaactggtaaagttgttgtcatgtgactgaaag 41319938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 30395903 - 30395866
Alignment:
Q  216 taaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||||||| |||||||||||||||||    
T  30395903 taaccttggcgcaactggtaaagttgttgtcatgtgac 30395866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 38478461 - 38478412
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||| ||| | ||||||||||||||| |||||    
T  38478461 gaggggtaaccttggcgcaactagtaaacttgttgtcatgtgactgaaag 38478412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 252
Target Start/End: Original strand, 45402077 - 45402114
Alignment:
Q  215 gtaaccttggcgcaactggtacagttgttgtcatgtga 252  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  45402077 gtaaccttggcgcaactggtaaagttgttgtcatgtga 45402114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 21723642 - 21723684
Alignment:
Q  211 aggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||| || ||||||||| |||||||||||||||||    
T  21723642 aggggtaaccttcgcacaactggtaaagttgttgtcatgtgac 21723684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 27201623 - 27201673
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||| ||| || ||||| ||||||||||||||||| |||||    
T  27201623 tgaggggtaaccttagcgtaaatggtaaagttgttgtcatgtgactgaaag 27201673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 10163736 - 10163777
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtg 251  Q
    |||||||||| |||||||||||| || |||||||||||||||    
T  10163736 gaggggtaacattggcgcaactgataaagttgttgtcatgtg 10163777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 23768498 - 23768458
Alignment:
Q  213 gggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||| | ||||||||||| |||||||||||||||||    
T  23768498 gggtaacctcgacgcaactggtaaagttgttgtcatgtgac 23768458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 24950 - 24899
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  24950 atgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 24899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 2626471 - 2626522
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  2626471 atgaggggtaaccttggcgcaattggtaaagttgttgtcatgtgaccgaaag 2626522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 17823529 - 17823579
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  17823529 tgaggggtaatcttggcgcaactggtaaagttgttgtcatgtgaccgaaag 17823579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 30454277 - 30454227
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  30454277 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 30454227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 12670429 - 12670380
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  12670429 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 12670380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 7136710 - 7136667
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  7136710 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 7136667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 35261633 - 35261676
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  35261633 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 35261676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 39461179 - 39461128
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  39461179 atgaggggtaaccttggcgcaactggtaaagttgttgtcatgagactgaaag 39461128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 20869677 - 20869628
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||| |||||||||||||||||||| ||||||||||||||||| |||||    
T  20869677 gagggataaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 20869628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 23286476 - 23286431
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||    
T  23286476 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 23286431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 24245405 - 24245454
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  24245405 gaggggtaaccttggggcaactggtaaagttgttgtcatgtgactgaaag 24245454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 13160655 - 13160699
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||    
T  13160655 tgaggggtaacctcggcgcaactggtaaagttgttgtcatgtgac 13160699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 28817808 - 28817764
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||| |||||||||| |||||||||||||||||    
T  28817808 tgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgac 28817764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 36720749 - 36720793
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||||| |||||||| |||||||||||||||||    
T  36720749 tgaggggtaaccttggcgtaactggtaaagttgttgtcatgtgac 36720793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 40605087 - 40605044
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtga 252  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||    
T  40605087 tgaggggtaactttggcgcaactggtaaagttgttgtcatgtga 40605044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 44530103 - 44530146
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||||||||||||| ||||| |||||||||||    
T  44530103 gaggggtaaccttggcgcaactggtaaagttgctgtcatgtgac 44530146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 25250474 - 25250519
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||    
T  25250474 atgagaggtaaccttggcacaactggtaaagttgttgtcatgtgac 25250519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 29521866 - 29521823
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||||||||||| || |||||||||| ||||||    
T  29521866 gaggggtaaccttggcgcaactgataaagttgttgtcgtgtgac 29521823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 18164941 - 18164891
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||| ||||||||||| |||  ||||||||||||||||| |||||    
T  18164941 tgaggggtaatcttggcgcaaccggtgaagttgttgtcatgtgactgaaag 18164891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 253
Target Start/End: Original strand, 28407379 - 28407413
Alignment:
Q  219 ccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||||| |||||||||||||||||    
T  28407379 ccttggcgcaactggtaaagttgttgtcatgtgac 28407413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 45071219 - 45071261
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtga 252  Q
    |||||||||||||||||  ||||||| ||||||||||||||||    
T  45071219 gaggggtaaccttggcgatactggtaaagttgttgtcatgtga 45071261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 6760775 - 6760819
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||| ||||||||||||||| |||||||||||| ||||    
T  6760775 atgaggggtaac-ttggcgcaactggtaaagttgttgtcatatgac 6760819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 20284250 - 20284205
Alignment:
Q  214 ggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||| |||||| |||| ||||||||||||||||| |||||    
T  20284250 ggtaaccttgacgcaacgggtaaagttgttgtcatgtgactgaaag 20284205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 21070879 - 21070834
Alignment:
Q  214 ggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||| |||||| |||| ||||||||||||||||| |||||    
T  21070879 ggtaaccttgacgcaacgggtaaagttgttgtcatgtgactgaaag 21070834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 247
Target Start/End: Original strand, 42840863 - 42840900
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtca 247  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  42840863 gaggggtaaccttggcgcaactagtaaagttgttgtca 42840900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 48735304 - 48735253
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  48735304 atgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 48735253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 32758214 - 32758264
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  32758214 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 32758264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 47078034 - 47077985
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  47078034 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 47077985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 2541202 - 2541158
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  2541202 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 2541158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 42496019 - 42495967
Alignment:
Q  207 catgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||| |||||    
T  42496019 catgaggggtaaccttggcgcaactggtaaagttgttgtcatatgactgaaag 42495967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 42798623 - 42798666
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  42798623 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 42798666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 18326989 - 18327031
Alignment:
Q  211 aggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  18326989 aggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 18327031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 35334998 - 35334952
Alignment:
Q  207 catgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||    
T  35334998 catgagggataaccttggcgcaactggtaaagttgttgtcatgtgac 35334952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 46354148 - 46354190
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtga 252  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  46354148 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtga 46354190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 21172188 - 21172139
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||| |||||||||||||| || |||||    
T  21172188 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtaactgaaag 21172139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 22699151 - 22699102
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  22699151 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaag 22699102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 42805476 - 42805521
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||    
T  42805476 atgaggggtaaccttggcgtaactggtaaagttgttgtcatgtgac 42805521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 43557426 - 43557475
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  43557426 gaggggtaaccttgccgcaactggtaaagttgttgtcatgtgactgaaag 43557475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 5180337 - 5180289
Alignment:
Q  211 aggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  5180337 aggggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaag 5180289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 14732999 - 14732955
Alignment:
Q  214 ggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaa 258  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||    
T  14732999 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaa 14732955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 252
Target Start/End: Complemental strand, 34626390 - 34626346
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtga 252  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||    
T  34626390 atgaggggtaaccttagcgcaactggtaaagttgttgtcatgtga 34626346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 19427059 - 19427021
Alignment:
Q  221 ttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  19427059 ttggcgcaactggtaaagttgttgtcatgtgaccgaaag 19427021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 7193039 - 7193088
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||| |||| ||| ||||||||||||||||| |||||    
T  7193039 gaggggtaaccttggcgtaacttgtaaagttgttgtcatgtgactgaaag 7193088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 27629596 - 27629637
Alignment:
Q  218 accttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  27629596 accttggcgcaactggtaaagttgttgtcatttgaccgaaag 27629637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 42476826 - 42476870
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||| |||||| |||||||| |||||||||||||||||    
T  42476826 tgaggggtaacattggcgtaactggtaaagttgttgtcatgtgac 42476870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 2663112 - 2663069
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||    
T  2663112 gaggggtaaccttggcgcaactagtaaagttgttgttatgtgac 2663069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 8149126 - 8149084
Alignment:
Q  211 aggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||| |||||||||  ||||||||||||||||    
T  8149126 aggggtaaccttggcacaactggtaatgttgttgtcatgtgac 8149084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 10693245 - 10693203
Alignment:
Q  217 aaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||    
T  10693245 aaccttggcgcaactagtaaagttgttgtcatgtgactgaaag 10693203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 11617762 - 11617720
Alignment:
Q  217 aaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||    
T  11617762 aacctcggcgcaactggtaaagttgttgtcatgtgactgaaag 11617720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 12473256 - 12473298
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgt 250  Q
    |||||||||| |||||||||||| |||| ||||||||||||||    
T  12473256 atgaggggtagccttggcgcaaccggtaaagttgttgtcatgt 12473298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 25198679 - 25198725
Alignment:
Q  213 gggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||| |||||||| |||||||||||| |||| |||||    
T  25198679 gggtaaccttggcgtaactggtaaagttgttgtcatatgactgaaag 25198725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 29140538 - 29140492
Alignment:
Q  213 gggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||| |||||||||||||||| |||||||||||||| || |||||    
T  29140538 gggtaatcttggcgcaactggtaaagttgttgtcatgtaactgaaag 29140492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 253
Target Start/End: Original strand, 40463837 - 40463874
Alignment:
Q  216 taaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  40463837 taaccttggcgcaaccggtaaagttgttgtcatgtgac 40463874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 21447544 - 21447584
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgt 250  Q
    ||||||||||||||||||||||| || | ||||||||||||    
T  21447544 gaggggtaaccttggcgcaactgataaatttgttgtcatgt 21447584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 28078313 - 28078269
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||| |||||||||| ||  |||||||||||||||||    
T  28078313 tgaggggtaaccctggcgcaactcgtgaagttgttgtcatgtgac 28078269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 48599006 - 48598955
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  48599006 atgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 48598955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 6430807 - 6430757
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  6430807 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 6430757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 20224937 - 20224987
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  20224937 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 20224987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 10660358 - 10660407
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  10660358 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 10660407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 10874503 - 10874552
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  10874503 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 10874552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 23501747 - 23501796
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  23501747 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 23501796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 5648212 - 5648256
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  5648212 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 5648256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 5306846 - 5306795
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  5306846 atgaggggtaaccttggcgcaactggtaaagttgatgtcatgtgactgaaag 5306795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 14590790 - 14590840
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||| |||||||||||||||||||||| ||||||||||||||||| |||||    
T  14590790 tgagtggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 14590840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 255
Target Start/End: Original strand, 18969698 - 18969740
Alignment:
Q  213 gggtaaccttggcgcaactggtacagttgttgtcatgtgaccg 255  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  18969698 gggtaaccttggcgcaactggtaaagttgttgtcatgtgaccg 18969740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 30639333 - 30639383
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||||||||||||| |||||||||| |||||| |||||    
T  30639333 tgaggggtaaccttggcgcaactggtaaagttgttgtcttgtgactgaaag 30639383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 11054327 - 11054278
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||| ||||||||||||||| ||||||||||||||||| |||||    
T  11054327 gaggggtaactttggcgcaactggtaaagttgttgtcatgtgactgaaag 11054278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 47528709 - 47528660
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  47528709 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaag 47528660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 55766647 - 55766602
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccg 255  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||    
T  55766647 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgaccg 55766602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 16911519 - 16911559
Alignment:
Q  213 gggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  16911519 gggtaaccttggcgcaactggtaaagttgttgtcatgtgac 16911559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 30352767 - 30352723
Alignment:
Q  215 gtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  30352767 gtaaccttggcgcaactggtaaagttgttgtcaagtgaccgaaag 30352723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 13256578 - 13256535
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||| |||||||||| |||||||||||||||||    
T  13256578 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgac 13256535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 20405047 - 20405090
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||| ||||||||||| |||||||||||||||||    
T  20405047 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgac 20405090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 21646918 - 21646961
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||| |||||||||||||||||||| |||||||||||||||||    
T  21646918 gagggataaccttggcgcaactggtaaagttgttgtcatgtgac 21646961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 17315476 - 17315430
Alignment:
Q  213 gggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||| |||| ||||||||||||||||| |||||    
T  17315476 gggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaag 17315430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 55830902 - 55830860
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtga 252  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  55830902 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtga 55830860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 252
Target Start/End: Complemental strand, 5313177 - 5313133
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtga 252  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||    
T  5313177 atgacgggtaaccttggcgtaactggtaaagttgttgtcatgtga 5313133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 16408777 - 16408741
Alignment:
Q  217 aaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||||||| |||||||||||||||||    
T  16408777 aaccttggcgcaactggtaaagttgttgtcatgtgac 16408741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 29879680 - 29879635
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||| |||| ||||||| || |||||||||||||||||    
T  29879680 atgaggggtaacattggtgcaactgataaagttgttgtcatgtgac 29879635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 37494805 - 37494854
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||| |||||||||| |||||||| |||| ||| |||||    
T  37494805 gaggggtaaccttggtgcaactggtaaagttgttgccatgcgactgaaag 37494854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 54966977 - 54967024
Alignment:
Q  211 aggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||| |||||||||||||| |||| ||||||||||||||||| |||||    
T  54966977 agggggaaccttggcgcaac-ggtaaagttgttgtcatgtgactgaaag 54967024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 8247872 - 8247821
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  8247872 atgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 8247821  T

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Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 10870132 - 10870083
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  10870132 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 10870083  T

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Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 12914216 - 12914167
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  12914216 gaggggtaaccttggcgcaactggtaaagttgttgtaatgtgaccgaaag 12914167  T

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Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 7697067 - 7697023
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  7697067 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 7697023  T

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Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 16735416 - 16735460
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  16735416 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 16735460  T

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Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 40272994 - 40272950
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  40272994 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 40272950  T

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Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 13730785 - 13730742
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  13730785 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 13730742  T

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Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 46421218 - 46421175
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  46421218 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 46421175  T

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Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 52926391 - 52926348
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  52926391 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 52926348  T

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Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 9607178 - 9607228
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  9607178 tgaggggtaaccttggcgcaacttgtaaagttgttgtcatgtgactgaaag 9607228  T

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Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 1217064 - 1217115
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||||| |||||| ||||||| || |||||    
T  1217064 atgaggggtaaccttggcgcaactggtaaagttgtagtcatgtcactgaaag 1217115  T

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Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 4495845 - 4495802
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  4495845 gaggggtaaccttcgcgcaactggtaaagttgttgtcatgtgac 4495802  T

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Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 25517353 - 25517311
Alignment:
Q  211 aggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||| |||||||||||||||||||| |||||||||||||||||    
T  25517353 agggataaccttggcgcaactggtaaagttgttgtcatgtgac 25517311  T

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Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 29366902 - 29366860
Alignment:
Q  211 aggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||| |||||||| |||||||||||||||||    
T  29366902 aggggtaaccttggcgtaactggtaaagttgttgtcatgtgac 29366860  T

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Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 39203491 - 39203541
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||| |||||    
T  39203491 tgaggggtaaccttggcacaacttgtaaagttgttgtcatgtgactgaaag 39203541  T

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Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 9276248 - 9276289
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatg 249  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  9276248 atgaggggtaaccttggcgcaactagtaaagttgttgtcatg 9276289  T

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Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 6412002 - 6411962
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgt 250  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  6412002 gaggggtaaccttgacgcaactggtaaagttgttgtcatgt 6411962  T

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Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 13628976 - 13628924
Alignment:
Q  208 atgaggggtaaccttggcgcaactggt-acagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||| |||||||| | ||||||||||||||||| |||||    
T  13628976 atgaggggtaaccttggcacaactggtaaaagttgttgtcatgtgactgaaag 13628924  T

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Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 21874999 - 21875039
Alignment:
Q  213 gggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  21874999 gggtaaccttgacgcaactggtaaagttgttgtcatgtgac 21875039  T

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Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 22609742 - 22609785
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||||||||| |||| |||||||||||||||||    
T  22609742 tgaggggtaaccttggcgcaac-ggtaaagttgttgtcatgtgac 22609785  T

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Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 5173903 - 5173852
Alignment:
Q  209 tgaggggtaaccttggcgcaactggt-acagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||||||||| || | ||||||||||||||||| |||||    
T  5173903 tgaggggtaaccttggcgcaactcgtaaaagttgttgtcatgtgactgaaag 5173852  T

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Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 242
Target Start/End: Original strand, 12525385 - 12525418
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgt 242  Q
    ||||||||||||||||||||||||||| ||||||    
T  12525385 tgaggggtaaccttggcgcaactggtaaagttgt 12525418  T

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Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 22123092 - 22123047
Alignment:
Q  214 ggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||||    
T  22123092 ggtaaccttggcgccactggtaaatttgttgtcatgtgactgaaag 22123047  T

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Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 250
Target Start/End: Original strand, 23871418 - 23871455
Alignment:
Q  213 gggtaaccttggcgcaactggtacagttgttgtcatgt 250  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  23871418 gggtaaccttggcgcaactagtaaagttgttgtcatgt 23871455  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 26869696 - 26869732
Alignment:
Q  223 ggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  26869696 ggcgcaactggtaaagttgttgtcatgtgactgaaag 26869732  T

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Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 8170172 - 8170114
Alignment:
Q  201 tagacacatgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||| ||| ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  8170172 tagaaacaagagggctaaccttggcgcaactggtaaagttgttgtcatgtgaccgaaag 8170114  T

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Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 38879534 - 38879584
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  38879534 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 38879584  T

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Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 1565385 - 1565434
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  1565385 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 1565434  T

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Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 41014271 - 41014316
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  41014271 atgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 41014316  T

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Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 24448844 - 24448887
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  24448844 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 24448887  T

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Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 37024736 - 37024686
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  37024736 tgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaag 37024686  T

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Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 43334159 - 43334205
Alignment:
Q  213 gggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  43334159 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 43334205  T

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Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 35710267 - 35710316
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||| |||||||||||||| || |||||    
T  35710267 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtaactgaaag 35710316  T

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Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 4619284 - 4619244
Alignment:
Q  213 gggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  4619284 gggtaaccttggcgcaactggtaaagttgttgtcatgtgac 4619244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 19438703 - 19438746
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  19438703 gaggggtaaccttggcgcaactggtaaagttgttgtcatatgac 19438746  T

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Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 2838733 - 2838775
Alignment:
Q  211 aggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||||||| |||| |||||||||||||||||    
T  2838733 aggggtaaccttggcgcaaccggtaaagttgttgtcatgtgac 2838775  T

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Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 23974734 - 23974777
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||||||||| |||| |||||||||||||||||    
T  23974734 tgaggggtaaccttggcgcaac-ggtaaagttgttgtcatgtgac 23974777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 41956884 - 41956924
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcat 248  Q
    |||||||||||| ||||||||||||||| ||||||||||||    
T  41956884 atgaggggtaacattggcgcaactggtaaagttgttgtcat 41956924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 22187238 - 22187288
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||| ||||||||||| ||| |||||||||||| |||| |||||    
T  22187238 tgaggggtaactttggcgcaactagtaaagttgttgtcatttgactgaaag 22187288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 22861844 - 22861798
Alignment:
Q  213 gggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||| |||||| || ||||||||||||||||| |||||    
T  22861844 gggtaaccttggcacaactgataaagttgttgtcatgtgactgaaag 22861798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 27328709 - 27328755
Alignment:
Q  213 gggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||| ||||| ||||| ||||||||||||||||| |||||    
T  27328709 gggtaaccttgacgcaattggtaaagttgttgtcatgtgactgaaag 27328755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 253
Target Start/End: Original strand, 31299591 - 31299629
Alignment:
Q  215 gtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  31299591 gtaaccttggtgcaactggtaaagttgttgtcatgtgac 31299629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 22600407 - 22600451
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||| || |||||||| ||||||| |||||||||    
T  22600407 tgaggggtaaccttgacgtaactggtaaagttgttatcatgtgac 22600451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 14530271 - 14530321
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  14530271 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 14530321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 12024099 - 12024050
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  12024099 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 12024050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 25079900 - 25079856
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  25079900 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 25079856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 39189603 - 39189559
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  39189603 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 39189559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 8455497 - 8455454
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  8455497 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 8455454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 17896215 - 17896262
Alignment:
Q  212 ggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  17896215 ggggtaaccttgacgcaactggtaaagttgttgtcatgtgaccgaaag 17896262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 23397718 - 23397769
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  23397718 atgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaag 23397769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 21779441 - 21779391
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  21779441 tgaggggtaaccttggcgcaactggtgaagttgttgtcatgtgactgaaag 21779391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 11514392 - 11514433
Alignment:
Q  212 ggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  11514392 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgac 11514433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 22371009 - 22371054
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  22371009 atgaggggtaaccttggcccaactggtaaagttgttgtcatgtgac 22371054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 10543653 - 10543701
Alignment:
Q  211 aggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||| || ||||||||||||||||| |||||    
T  10543653 aggggtaaccttggcgcaactgataaagttgttgtcatgtgactgaaag 10543701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 14544018 - 14544066
Alignment:
Q  211 aggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| |||||    
T  14544018 aggggtaaccttggcgcaattggtaaagttgttgtcatgtgactgaaag 14544066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 9671134 - 9671177
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  9671134 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgac 9671177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 17705449 - 17705492
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||| |||||||||| |||||||||||||||||    
T  17705449 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgac 17705492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 19977893 - 19977846
Alignment:
Q  212 ggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||    
T  19977893 ggggtaaccttggcggaactggtgaagttgttgtcatgtgaccgaaag 19977846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 27573581 - 27573624
Alignment:
Q  216 taaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||| ||||||||||||||||| |||||    
T  27573581 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 27573624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 7214488 - 7214537
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||| |||||    
T  7214488 gaggggtaactttggcacaactggtaaagttgttgtcatgtgactgaaag 7214537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 25249920 - 25249875
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||||    
T  25249920 atgatgggtaaccttggcgcaattggtaaagttgttgtcatgtgac 25249875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 27466311 - 27466262
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||| |||||    
T  27466311 gaggcgtaacattggcgcaactggtaaagttgttgtcatgtgactgaaag 27466262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 24200805 - 24200758
Alignment:
Q  211 aggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaa 258  Q
    |||||||||||||  |||||||||| ||||||||||||||||| ||||    
T  24200805 aggggtaaccttgatgcaactggtaaagttgttgtcatgtgactgaaa 24200758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 26684803 - 26684761
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtga 252  Q
    |||||||||| || |||||||||||| ||||||||||||||||    
T  26684803 gaggggtaactttagcgcaactggtaaagttgttgtcatgtga 26684761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 30533 - 30582
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  30533 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 30582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 206 - 259
Target Start/End: Original strand, 83825 - 83878
Alignment:
Q  206 acatgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  83825 acatgaggggtaaccttggcgcaactagtaaagttgttgtcatgtgactgaaag 83878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 1346918 - 1346967
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  1346918 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 1346967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 1354936 - 1354887
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  1354936 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 1354887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 8409195 - 8409246
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  8409195 atgaggggtaaccttggcgcaactggtaaagttgttgtaatgtgactgaaag 8409246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 3815256 - 3815210
Alignment:
Q  212 ggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaa 258  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  3815256 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaa 3815210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 14975263 - 14975218
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||| ||||||||||||||| |||| |||||||||||||||||    
T  14975263 atgagggataaccttggcgcaaccggtaaagttgttgtcatgtgac 14975218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 20400625 - 20400670
Alignment:
Q  214 ggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||| ||||| ||||||||||||||||| |||||    
T  20400625 ggtaaccttggcgcaattggtatagttgttgtcatgtgactgaaag 20400670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 24734591 - 24734636
Alignment:
Q  214 ggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||| ||||||||||||||| ||||||||||||||||| |||||    
T  24734591 ggtaacattggcgcaactggtaaagttgttgtcatgtgactgaaag 24734636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 33923009 - 33922961
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaa 258  Q
    ||||||||||||||||||||| |||| |||||||||||| |||| ||||    
T  33923009 gaggggtaaccttggcgcaaccggtaaagttgttgtcatttgactgaaa 33922961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 1941809 - 1941852
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtgac 253  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||    
T  1941809 gaggggtaaccttggtgcaactggtaaagttgttgtcatctgac 1941852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 9161075 - 9161126
Alignment:
Q  208 atgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||| |||||  |||| ||||||||||||||||| |||||    
T  9161075 atgaggggtaaccttgacgcaatcggtaaagttgttgtcatgtgactgaaag 9161126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 12222088 - 12222049
Alignment:
Q  220 cttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  12222088 cttggcgcaactggtaaagttgttgtcatgtgactgaaag 12222049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 15866218 - 15866176
Alignment:
Q  210 gaggggtaaccttggcgcaactggtacagttgttgtcatgtga 252  Q
    |||||||||||||||| ||||||||| |||||||| |||||||    
T  15866218 gaggggtaaccttggcccaactggtaaagttgttggcatgtga 15866176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 13905158 - 13905111
Alignment:
Q  211 aggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||| |||||||||||||| |||| ||||||||||||||||| |||||    
T  13905158 agggggaaccttggcgcaac-ggtaaagttgttgtcatgtgactgaaag 13905111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 226588 - 226538
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    |||| |||||||||||||||||||||| ||||||||||||||||| |||||    
T  226588 tgagtggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaag 226538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 13202 - 13155
Alignment:
Q  212 ggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||||||||||| |||| ||||||||||||||||| |||||    
T  13202 ggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaag 13155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 10226 - 10180
Alignment:
Q  213 gggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  10226 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaag 10180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 20554 - 20508
Alignment:
Q  213 gggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaag 259  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  20554 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaag 20508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 8898 - 8947
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaa 258  Q
    |||||||||||||||||||||| |||  ||||||||||||||||| ||||    
T  8898 tgaggggtaaccttggcgcaaccggtgaagttgttgtcatgtgactgaaa 8947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 19226 - 19275
Alignment:
Q  209 tgaggggtaaccttggcgcaactggtacagttgttgtcatgtgaccgaaa 258  Q
    |||||||||||||||||||||| |||  ||||||||||||||||| ||||    
T  19226 tgaggggtaaccttggcgcaaccggtgaagttgttgtcatgtgactgaaa 19275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 251
Target Start/End: Complemental strand, 73034 - 73001
Alignment:
Q  218 accttggcgcaactggtacagttgttgtcatgtg 251  Q
    |||||||||||||||||| |||||||||||||||    
T  73034 accttggcgcaactggtaaagttgttgtcatgtg 73001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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