View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7080_high_21 (Length: 250)
Name: NF7080_high_21
Description: NF7080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7080_high_21 |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 36763610 - 36763390
Alignment:
| Q |
19 |
tattatatgttgaaggcacgtggagcaaaagtgccggtaaagtacctttctttgaatgtttatgtaaattgttaatatgaaaacatgatgcattgttgaa |
118 |
Q |
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| T |
36763610 |
tattatatcttgaaggcacgtggagcaaaagtgccggtacagtacctttctttgaatgtttatgtaaattgttaatatgaaaacatgatgcattgttgaa |
36763511 |
T |
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| Q |
119 |
tttggagacttgctgattaataatctttgatgtggttagaaaaccaggaagactccaatgactgttgcaaatcctcgtgaagttcctgaatatgaactca |
218 |
Q |
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| T |
36763510 |
tttggagacttgctgattaataatctttgatgtggttagaaaaccaggaagactccaatgactgttgcaaatcctcgtgaagttcctgaatatgaactca |
36763411 |
T |
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| Q |
219 |
atccgttagaaccacaggttc |
239 |
Q |
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|||||||||||| |||||||| |
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| T |
36763410 |
atccgttagaactacaggttc |
36763390 |
T |
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