View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7080_low_13 (Length: 318)
Name: NF7080_low_13
Description: NF7080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7080_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 26952602 - 26952902
Alignment:
| Q |
1 |
tctaacaccaaaaagaaaaactcatcataactaaatcaaccagatgattccttctcttgaatcttgatcatgttcaaggtatataaataataacgagata |
100 |
Q |
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| T |
26952602 |
tctaacaccaaaaagaaaaactcatcataactaaatcaaccagatgattccttctcttgaatcttgatcatgttcaaggtatataaataataacgagaca |
26952701 |
T |
|
| Q |
101 |
aaagcagaattttattttcaatcaagcctgtattccttggttaaaaaatgttgtcatggtataatctttatttactgttacaagaacagaaaatgaaacc |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26952702 |
aaagcataattttattttcaatcaagcctgtattccttggttaaaaaatgttgtcatggtataatctttatttactgttacaagaacagaaaatgaaacc |
26952801 |
T |
|
| Q |
201 |
tacttccatccctctacaaaatgtagtataatttcttgaacttataaaacatcacttacaatcttcaattaaattgatgtttataaaattagaagataaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
26952802 |
tacttccatccctctacaaaatgtagtataatttcttgaacttataaaacattacttacaatcttcaattaaattgat-tttataaaattagaagataaa |
26952900 |
T |
|
| Q |
301 |
tt |
302 |
Q |
| |
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|| |
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|
| T |
26952901 |
tt |
26952902 |
T |
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