View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7082_high_7 (Length: 286)

Name: NF7082_high_7
Description: NF7082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7082_high_7
NF7082_high_7
[»] chr3 (36 HSPs)
chr3 (1-267)||(41707052-41707321)
chr3 (1-267)||(8363970-8364239)
chr3 (1-267)||(29387751-29388020)
chr3 (1-267)||(46791694-46791963)
chr3 (2-267)||(28132732-28133000)
chr3 (1-267)||(51939553-51939821)
chr3 (1-267)||(52655120-52655389)
chr3 (1-267)||(23067721-23067991)
chr3 (6-267)||(18407995-18408258)
chr3 (2-267)||(21784781-21785048)
chr3 (1-267)||(24252417-24252687)
chr3 (2-267)||(27729766-27730032)
chr3 (1-264)||(23164572-23164836)
chr3 (1-190)||(27110882-27111072)
chr3 (1-210)||(6715249-6715458)
chr3 (61-267)||(54430412-54430619)
chr3 (61-267)||(25599083-25599291)
chr3 (1-128)||(51064299-51064426)
chr3 (52-267)||(13401311-13401526)
chr3 (63-267)||(40152126-40152332)
chr3 (1-267)||(48627026-48627278)
chr3 (122-264)||(7766983-7767127)
chr3 (148-267)||(21596282-21596402)
chr3 (150-264)||(42009262-42009377)
chr3 (203-264)||(27303189-27303251)
chr3 (203-264)||(36538186-36538248)
chr3 (203-264)||(46904744-46904806)
chr3 (203-264)||(50677314-50677376)
chr3 (187-243)||(1649853-1649909)
chr3 (153-260)||(19965884-19965992)
chr3 (157-257)||(1255057-1255158)
chr3 (130-264)||(51146867-51147001)
chr3 (150-243)||(43905865-43905958)
chr3 (203-265)||(4207357-4207416)
chr3 (204-267)||(20762052-20762116)
chr3 (61-105)||(43905976-43906020)
[»] chr8 (31 HSPs)
chr8 (1-267)||(7857885-7858152)
chr8 (1-267)||(18420606-18420877)
chr8 (2-267)||(43968067-43968334)
chr8 (5-267)||(13585103-13585366)
chr8 (1-267)||(43926320-43926589)
chr8 (1-267)||(44665043-44665307)
chr8 (1-259)||(42951774-42952040)
chr8 (1-267)||(3471392-3471667)
chr8 (1-181)||(3445481-3445661)
chr8 (61-264)||(32098178-32098383)
chr8 (1-267)||(34523948-34524200)
chr8 (102-267)||(18112011-18112183)
chr8 (2-267)||(5869319-5869579)
chr8 (1-267)||(27074384-27074641)
chr8 (72-144)||(1003958-1004032)
chr8 (122-264)||(3628747-3628889)
chr8 (61-144)||(41666058-41666141)
chr8 (187-264)||(23567274-23567352)
chr8 (203-267)||(12531561-12531626)
chr8 (199-267)||(1004056-1004126)
chr8 (187-264)||(39697938-39698016)
chr8 (1-103)||(18111613-18111717)
chr8 (116-264)||(35874840-35874990)
chr8 (150-267)||(30915284-30915403)
chr8 (203-267)||(29372359-29372424)
chr8 (203-257)||(42076110-42076165)
chr8 (60-110)||(12531432-12531482)
chr8 (203-266)||(5971758-5971818)
chr8 (60-110)||(39698079-39698130)
chr8 (61-107)||(23567418-23567464)
chr8 (148-229)||(2545957-2546037)
[»] chr7 (36 HSPs)
chr7 (1-267)||(46221700-46221968)
chr7 (2-270)||(8358288-8358558)
chr7 (8-264)||(18015582-18015839)
chr7 (4-267)||(33419114-33419379)
chr7 (1-267)||(33909865-33910131)
chr7 (1-259)||(42161125-42161388)
chr7 (29-267)||(4099794-4100035)
chr7 (1-267)||(36796369-36796635)
chr7 (48-267)||(11672429-11672653)
chr7 (2-270)||(6380078-6380349)
chr7 (1-267)||(44894026-44894298)
chr7 (2-170)||(38524984-38525154)
chr7 (1-187)||(12251466-12251653)
chr7 (61-267)||(7636323-7636536)
chr7 (1-267)||(26282539-26282791)
chr7 (1-266)||(40001694-40001944)
chr7 (63-267)||(26633227-26633430)
chr7 (96-264)||(32956670-32956839)
chr7 (175-267)||(773881-773974)
chr7 (1-254)||(25061703-25061957)
chr7 (87-267)||(41908064-41908245)
chr7 (1-86)||(27432391-27432476)
chr7 (188-267)||(12251285-12251365)
chr7 (116-267)||(30739038-30739190)
chr7 (148-264)||(36438351-36438468)
chr7 (1-267)||(1365824-1366076)
chr7 (148-261)||(40737994-40738108)
chr7 (148-264)||(9479074-9479191)
chr7 (202-264)||(18895397-18895460)
chr7 (204-267)||(42312012-42312076)
chr7 (21-267)||(40841242-40841491)
chr7 (1-54)||(44877006-44877059)
chr7 (61-110)||(25609964-25610014)
chr7 (203-267)||(44876152-44876217)
chr7 (206-267)||(3799757-3799819)
chr7 (203-264)||(7366689-7366751)
[»] chr2 (36 HSPs)
chr2 (2-267)||(19367416-19367683)
chr2 (1-267)||(18676308-18676577)
chr2 (1-267)||(26151744-26152012)
chr2 (1-267)||(25222121-25222390)
chr2 (1-264)||(13020220-13020487)
chr2 (2-267)||(42411555-42411822)
chr2 (1-267)||(45618775-45619043)
chr2 (1-267)||(6530458-6530726)
chr2 (2-265)||(7993433-7993697)
chr2 (1-267)||(41096535-41096805)
chr2 (1-267)||(42759753-42760013)
chr2 (1-267)||(4855788-4856060)
chr2 (1-222)||(36481204-36481425)
chr2 (2-267)||(45042187-45042459)
chr2 (10-267)||(2063616-2063872)
chr2 (55-267)||(12269279-12269491)
chr2 (105-267)||(34061853-34062015)
chr2 (187-267)||(18172937-18173018)
chr2 (116-264)||(39081314-39081462)
chr2 (1-264)||(15457316-15457564)
chr2 (148-264)||(21747230-21747347)
chr2 (148-267)||(27302525-27302645)
chr2 (122-264)||(1418832-1418973)
chr2 (82-267)||(36059902-36060087)
chr2 (187-267)||(38985706-38985787)
chr2 (61-267)||(18916051-18916245)
chr2 (73-267)||(31273163-31273357)
chr2 (203-264)||(13997316-13997378)
chr2 (203-264)||(38599404-38599466)
chr2 (219-267)||(17117642-17117691)
chr2 (63-267)||(1226263-1226465)
chr2 (61-110)||(17117778-17117828)
chr2 (61-110)||(18173080-18173130)
chr2 (203-264)||(29480637-29480699)
chr2 (61-110)||(38985849-38985899)
chr2 (197-264)||(18482506-18482575)
[»] chr6 (32 HSPs)
chr6 (2-264)||(2618155-2618419)
chr6 (1-267)||(6360560-6360826)
chr6 (1-267)||(3514847-3515117)
chr6 (1-267)||(6754005-6754273)
chr6 (1-267)||(29400939-29401207)
chr6 (1-267)||(7525163-7525433)
chr6 (13-267)||(57498-57755)
chr6 (94-267)||(12614713-12614885)
chr6 (1-202)||(24455018-24455220)
chr6 (1-180)||(31258543-31258724)
chr6 (117-267)||(29149316-29149470)
chr6 (107-267)||(628092-628254)
chr6 (1-83)||(12622144-12622226)
chr6 (94-267)||(30915363-30915539)
chr6 (150-264)||(3748568-3748683)
chr6 (188-266)||(31860989-31861067)
chr6 (157-267)||(1690630-1690741)
chr6 (173-267)||(14893414-14893509)
chr6 (203-264)||(21946109-21946171)
chr6 (116-267)||(19231529-19231679)
chr6 (180-267)||(22503725-22503810)
chr6 (203-267)||(29308464-29308529)
chr6 (203-267)||(1093038-1093102)
chr6 (203-243)||(31234913-31234953)
chr6 (1-110)||(1093181-1093289)
chr6 (61-107)||(29308611-29308658)
chr6 (61-110)||(1690774-1690824)
chr6 (226-267)||(6294279-6294321)
chr6 (61-110)||(31860876-31860926)
chr6 (205-264)||(15035784-15035840)
chr6 (206-243)||(32056065-32056102)
chr6 (203-243)||(31244050-31244089)
[»] chr4 (30 HSPs)
chr4 (1-267)||(32130787-32131055)
chr4 (2-267)||(28463585-28463853)
chr4 (1-267)||(53011514-53011779)
chr4 (2-267)||(11681739-11682008)
chr4 (2-267)||(11690018-11690287)
chr4 (1-265)||(19661179-19661444)
chr4 (1-267)||(41038047-41038317)
chr4 (11-267)||(23426163-23426417)
chr4 (1-267)||(44477837-44478106)
chr4 (1-232)||(21168855-21169088)
chr4 (1-267)||(27632200-27632465)
chr4 (2-267)||(23256394-23256661)
chr4 (1-267)||(29221618-29221889)
chr4 (105-243)||(16072498-16072636)
chr4 (148-267)||(29579827-29579947)
chr4 (1-111)||(39372815-39372927)
chr4 (99-267)||(21791544-21791712)
chr4 (1-267)||(45172642-45172893)
chr4 (148-264)||(35653980-35654097)
chr4 (116-264)||(43154788-43154936)
chr4 (1-264)||(34982039-34982288)
chr4 (2-144)||(51066707-51066851)
chr4 (148-267)||(5545276-5545396)
chr4 (116-264)||(22423600-22423748)
chr4 (203-267)||(55134210-55134275)
chr4 (116-264)||(24449040-24449190)
chr4 (187-267)||(10575520-10575601)
chr4 (10-119)||(29579655-29579766)
chr4 (93-144)||(48512342-48512393)
chr4 (63-232)||(26329065-26329233)
[»] chr1 (41 HSPs)
chr1 (1-267)||(12884134-12884403)
chr1 (1-264)||(51110101-51110368)
chr1 (2-267)||(48722367-48722637)
chr1 (1-266)||(14084699-14084966)
chr1 (8-267)||(50552299-50552562)
chr1 (1-267)||(17487280-17487551)
chr1 (1-267)||(33124627-33124898)
chr1 (1-264)||(18127937-18128205)
chr1 (73-267)||(30899526-30899723)
chr1 (1-267)||(10109516-10109787)
chr1 (11-264)||(20905287-20905545)
chr1 (1-266)||(6150504-6150787)
chr1 (1-180)||(20470526-20470706)
chr1 (22-267)||(29208095-29208341)
chr1 (1-266)||(52055348-52055618)
chr1 (61-267)||(27703526-27703737)
chr1 (48-267)||(25930448-25930671)
chr1 (61-267)||(30004904-30005108)
chr1 (1-267)||(6333513-6333781)
chr1 (148-267)||(50371081-50371201)
chr1 (130-267)||(12971336-12971473)
chr1 (116-270)||(5560399-5560553)
chr1 (161-267)||(28885668-28885775)
chr1 (21-207)||(28189211-28189403)
chr1 (196-267)||(2-74)
chr1 (129-264)||(37873762-37873898)
chr1 (148-259)||(44836726-44836838)
chr1 (1-123)||(2021942-2022064)
chr1 (203-264)||(17674354-17674416)
chr1 (202-264)||(13120866-13120929)
chr1 (29-267)||(1269385-1269618)
chr1 (203-264)||(22386837-22386899)
chr1 (148-264)||(42740057-42740174)
chr1 (103-264)||(15441193-15441355)
chr1 (168-267)||(9777380-9777481)
chr1 (203-264)||(24556808-24556870)
chr1 (94-257)||(3907366-3907528)
chr1 (201-243)||(32810373-32810415)
chr1 (1-110)||(12971220-12971329)
chr1 (116-223)||(26486407-26486513)
chr1 (39-103)||(28886140-28886205)
[»] chr5 (39 HSPs)
chr5 (2-267)||(13474427-13474697)
chr5 (1-267)||(26377771-26378042)
chr5 (1-267)||(13423659-13423931)
chr5 (27-267)||(13656033-13656277)
chr5 (2-261)||(36718570-36718832)
chr5 (1-264)||(12661102-12661373)
chr5 (2-209)||(8398778-8398989)
chr5 (1-267)||(19099311-19099581)
chr5 (48-224)||(26311851-26312029)
chr5 (1-267)||(43511433-43511685)
chr5 (130-267)||(29156120-29156257)
chr5 (148-264)||(138091-138208)
chr5 (187-267)||(42291878-42291959)
chr5 (148-267)||(17513933-17514053)
chr5 (130-267)||(10591270-10591407)
chr5 (187-267)||(20975971-20976052)
chr5 (29-267)||(4734579-4734802)
chr5 (34-255)||(27351179-27351404)
chr5 (202-264)||(18873458-18873521)
chr5 (148-267)||(931327-931442)
chr5 (99-267)||(40956217-40956380)
chr5 (2-110)||(20975800-20975906)
chr5 (210-267)||(3349726-3349784)
chr5 (203-267)||(5829387-5829450)
chr5 (94-224)||(8379562-8379691)
chr5 (148-260)||(10033493-10033607)
chr5 (204-264)||(17325847-17325909)
chr5 (205-264)||(7390400-7390460)
chr5 (204-267)||(33281677-33281741)
chr5 (1-110)||(42292022-42292129)
chr5 (61-106)||(17514092-17514138)
chr5 (1-104)||(10591418-10591519)
chr5 (81-243)||(23069099-23069262)
chr5 (187-243)||(37029054-37029108)
chr5 (148-267)||(40779139-40779258)
chr5 (210-264)||(16515533-16515588)
chr5 (61-110)||(29156062-29156113)
chr5 (31-138)||(40778675-40778785)
chr5 (62-110)||(3349869-3349917)
[»] scaffold0126 (1 HSPs)
scaffold0126 (1-270)||(16503-16780)
[»] scaffold0181 (2 HSPs)
scaffold0181 (90-274)||(17122-17307)
scaffold0181 (1-98)||(18128-18227)
[»] scaffold0035 (1 HSPs)
scaffold0035 (5-182)||(22846-23026)
[»] scaffold0100 (1 HSPs)
scaffold0100 (10-267)||(46170-46429)
[»] scaffold0564 (2 HSPs)
scaffold0564 (107-216)||(979-1088)
scaffold0564 (226-267)||(1086-1128)
[»] scaffold0606 (1 HSPs)
scaffold0606 (187-260)||(8399-8473)


Alignment Details
Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 41707321 - 41707052
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    ||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||  | |||||||||||    
T  41707321 cttgagggtgtgcaaggtgttcaaccaggccgggcctccaaatgctacgggcctctaacgaaaaattaaatttaatacccaccccccacttaaataaaaa 41707222  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    |||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| |||||||||||||||||||| |||    
T  41707221 atatatatgttatatctttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccac 41707122  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41707121 ccctaatttgcataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcat 41707052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 8363970 - 8364239
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    ||||||||||||||||||| ||||| ||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||  | |||||||||||    
T  8363970 cttgagggtgtgcaaggtgctcaaccaggccgggcctccaattgctacgggcctctaacgaaaaattaaatctaatatccaccccccacttaaataaaaa 8364069  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    |||||||||||||||| |||||||||||||||||||||||||||||   |||||||||| ||||| ||||||||| |||||||||||||||||||| |||    
T  8364070 atatatatgttatatccttttctttctttagtacacgtttgagtttttttctagactcttgttctcctttttgtacataaatcggatcctatcaaaccac 8364169  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  8364170 ccctaatttgtataatcacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcat 8364239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 29388020 - 29387751
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    |||||| |||||||||||| ||||| ||||||| ||| |||||| |||| || ||||||||||||||||||||||||||||||||  | |||||||||||    
T  29388020 cttgagtgtgtgcaaggtgctcaaccaggccggaccttcaaatgctacgagcttctaacgaaaaattaaatctaatacccaccccccacttaaataaaaa 29387921  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   | |||||||||||||| ||||||||| |||||||||||||||||||| |||    
T  29387920 atatatatgttatatcattttctttctttagtacacgtttgagtttttttttagactctagttctcctttttgtacataaatcggatcctatcaaaccac 29387821  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||    
T  29387820 ccctaatttgtataatcacttaatcaatcaatttgaaaagttatttcattgaaagaatcacaacaatcat 29387751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 46791963 - 46791694
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    ||||||||||||||||||| | ||||| | |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  | |||||||||||    
T  46791963 cttgagggtgtgcaaggtgcttaactaagtcgggcctccaaatgctacggacctctaacgaaaaattaaatctaatacccaccccccacttaaataaaaa 46791864  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    |||||||||||||| |||||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| |||||||||||||||||||| |||    
T  46791863 atatatatgttataacattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccac 46791764  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    | ||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||||||||    
T  46791763 ctctaatttgtataatcacttaatcagtcaatttggaaaactatttcattgcaagaatcacaacaatcat 46791694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 2 - 267
Target Start/End: Complemental strand, 28133000 - 28132732
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaa 99  Q
    |||||||||||||||||| ||||| ||  ||||||| |||||||||||||||| |||||||||||||||| |||||||||||||  |||||| |||||||    
T  28133000 ttgagggtgtgcaaggtgctcaaccagatcgggccttcaaatgttacgggcctttaacgaaaaattaaatataatacccaccccccatttaactaaaaaa 28132901  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||   |||||||||||||||| ||||||||| ||||||| |||||||||||||||||    
T  28132900 tatatatgttatatcattttctttctttagtacacatttgagattttttctagactctagttctcctttttgtacataaatcagatcctatcaaatcacc 28132801  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    | |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  28132800 cttaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcat 28132732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 51939821 - 51939553
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||  || ||||||||||| |||||||||||||||||||||||||  | |||||||||||    
T  51939821 cttgagggtgtgcaaggtgctcaaccaggcggggcctccaaattctatgggcctctaacaaaaaattaaatctaatacccaccccccacttaaataaaaa 51939722  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||   ||||||||||||||||  |||||||| ||||||| |||||||||||| |||    
T  51939721 atatatatgttatatccttttctttctttagtccacgtttgagttttt-tctagactctagttctcttttttgtacataaatcagatcctatcaaaccac 51939623  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  51939622 ccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcat 51939553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 52655389 - 52655120
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatt--taaataaaaa 98  Q
    ||||||||||||||||||| | ||| |||||||||||| |||||||| ||||||||||| |||||||||||||||| |||||||| |   ||||||||||    
T  52655389 cttgagggtgtgcaaggtgcttaaccaggccgggcctc-aaatgttatgggcctctaac-aaaaattaaatctaatccccaccccctacataaataaaaa 52655292  T
Q  99 atatatatgttatatcattttctttctttagtacac--gtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatc 196  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||| |    
T  52655291 atatatatgttatatcattttctttctttagtacacacgtttgagtttttctctagactctagttctcctttttgtatataaatcggatcctatcaaacc 52655192  T
Q  197 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  52655191 accactaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcat 52655120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 23067991 - 23067721
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||||| || ||||| |||||||||||||||||||| ||||||||||||| |||||||||||| |    
T  23067991 cttgagggtgtgcaaggtgctcaaccaggccgggcctccaattgctacggacctctaacgaaaaattaaatttaatacccacccccatttaaataaaata 23067892  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||   | ||||||| ||||||| ||||||||| |||||||||||||||||||| |||    
T  23067891 tatatatgttatatcattttctttctttagtacacgtttgagttttttttctagactttagttctcctttttgtacataaatcggatcctatcaaaccac 23067792  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca-acaatcat 267  Q
    ||||||||||||||||||||| | |||||||||||||||| || |||||| ||||||||||| ||||||||    
T  23067791 ccctaatttgtataatcacttcaccagtcaatttgaaaagttatttcatttaaagaatcacacacaatcat 23067721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 6 - 267
Target Start/End: Original strand, 18407995 - 18408258
Alignment:
Q  6 gggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatttaaataaaaaatata 103  Q
    ||||||| |||||| |||| |||||||||||| ||| || |||||  || |||||||||||||||| |||||||||||  ||| ||||||||||||||||    
T  18407995 gggtgtgtaaggtgttcaattaggccgggccttcaattgctacggatctttaacgaaaaattaaatataatacccaccttccacttaaataaaaaatata 18408094  T
Q  104 tatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcaccccta 203  Q
    |||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||  |||||||| |||||||||||||||||||| ||||||||    
T  18408095 tatgttatatcattttctttctttagtacacgtttgagttttt-tctagactttagttctcatttttgtacataaatcggatcctatcaaaccaccccta 18408193  T
Q  204 atttgtataatcacttaatcagtcaatttgaaaagct-attcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  18408194 atttgtataatcacttaatcagtcaatttgaaaagctaatccattgaaagaatcacaacaatcat 18408258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 2 - 267
Target Start/End: Complemental strand, 21785048 - 21784781
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaa- 99  Q
    |||||||||||||||||| | ||| ||||||||||||| |||| |||||| |||||||||||||||||||||||||  |||||| | ||||||||||||     
T  21785048 ttgagggtgtgcaaggtgcttaaccaggccgggcctcccaatgctacgggtctctaacgaaaaattaaatctaatattcacccccacttaaataaaaaaa 21784949  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    |||||||||||||| | ||| ||||||||||||||||||||||||   |||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  21784948 tatatatgttatataactttatttctttagtacacgtttgagttttt-tctagactctagttctcctttttgtacataaatcggatcctatcaaaccacc 21784850  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||    
T  21784849 cctaatttgtataatcacttaatcagttaatttggaaagctatttcattgaaagaatcacaacaatcat 21784781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 24252417 - 24252687
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    |||||||||||| |||||| ||||| || |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||  | |||| ||||||    
T  24252417 cttgagggtgtgtaaggtgctcaaccagaccgggcctccaaatgttacgggcctctaactaaaaattagatctaatacccacccccgacttaagtaaaaa 24252516  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaat--ctagactctagttcttctttttgtatataaatcggatcctatcaaatc 196  Q
    |||||||||||||||| |||||||||||||||||||||||||||||   |  ||||||||||||||||||||||||| |||| || |||||||||||| |    
T  24252517 atatatatgttatatctttttctttctttagtacacgtttgagtttttttttctagactctagttcttctttttgtacataa-tcagatcctatcaaacc 24252615  T
Q  197 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||| |||||||||||||||||||||||||||||||| |||| || |||| || ||||||||||||||||||    
T  24252616 acccttaatttgtataatcacttaatcagtcaatttggaaagttatttcagtgcaagaatcacaacaatcat 24252687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 2 - 267
Target Start/End: Complemental strand, 27730032 - 27729766
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaataaaaaata 101  Q
    ||||| ||||||||| || ||||  ||| ||| |||||||||| |||||||||||||||||||||||||| ||||||  |||||| ||||||||||||||    
T  27730032 ttgagagtgtgcaagatgctcaatcaggtcggacctccaaatggtacgggcctctaacgaaaaattaaatataatacgtaccccacttaaataaaaaata 27729933  T
Q  102 tatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccc 201  Q
    ||||||||||||||||||||||| |||||||||||||||||||   | |||||||||||||| ||||||||| |||||||||||| ||||||| ||||||    
T  27729932 tatatgttatatcattttctttcattagtacacgtttgagtttttttgtagactctagttctcctttttgtacataaatcggatcttatcaaaccacccc 27729833  T
Q  202 taatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||| |||||| |||||||| ||||| | || || ||||||||||||||||||||    
T  27729832 taatttgtataatcacataatcaatcaatttggaaagcaatttgatcgaaagaatcacaacaatcat 27729766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 23164836 - 23164572
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    |||| ||| |||||||||| ||||| ||| ||||||||||||||  | ||||||| ||| ||||||||  |||||||||||||||  | |||||||||||    
T  23164836 cttgggggagtgcaaggtgttcaaccaggtcgggcctccaaatgccatgggcctcaaacaaaaaattatgtctaatacccacccctcacttaaataaaaa 23164737  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    | |||||||||||||| |||||||| || |||||||||||||||||   |||||||||||||||| ||||||||| ||||||| |||||||||||| |||    
T  23164736 a-atatatgttatatccttttcttttttcagtacacgtttgagttttt-tctagactctagttctcctttttgtacataaatctgatcctatcaaaccac 23164639  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||||||||||||||||||||||| |||||||| ||  ||| |||||||||||||||||||||||    
T  23164638 ccctaatttgtataatcacttaatcaatcaatttggaagtctatttcattgaaagaatcacaacaat 23164572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 27111072 - 27110882
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--ttaaataaaaa 98  Q
    |||||||||||| |||||| ||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |  |||||||||||    
T  27111072 cttgagggtgtg-aaggtgctcaaccaggcggggcctccaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccctacttaaataaaaa 27110974  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctat 190  Q
    |||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||  |||||||| |||||||| |||||||    
T  27110973 atatatatgttatatctttttctttctttagtacacgtttgagtttttttctagactctagttctcatttttgtacataaatcgtatcctat 27110882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 6715249 - 6715458
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatttaaataaaaa 98  Q
    ||||||||||||||||||| ||||| |||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||    
T  6715249 cttgagggtgtgcaaggtgctcaaccaggccgagcctctaaatgttacgggcctctaacgaaaaattaaatttaatacccaccctccatttaaataaaaa 6715348  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    |||||||||||||||| || | | | |||| ||||||||||| |||   |||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  6715349 atatatatgttatatctttatatct-tttaatacacgtttga-tttttttctagactctagttctcctttttgtatataaatcggatcctatcaaaccac 6715446  T
Q  199 ccctaatttgta 210  Q
    |  |||||||||    
T  6715447 ctataatttgta 6715458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 61 - 267
Target Start/End: Original strand, 54430412 - 54430619
Alignment:
Q  61 aaaaattaaatctaatacccacc--ccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactcta 158  Q
    ||||||||| |||||||||||||  ||| |||||||||||| |||| ||||||||| |||||||| ||  ||||||||||||||||   ||||| |||||    
T  54430412 aaaaattaagtctaatacccacctcccacttaaataaaaaa-atatgtgttatatccttttcttttttcggtacacgtttgagttttt-tctaggctcta 54430509  T
Q  159 gttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatca 257  Q
    ||||| ||||||||| ||||||| |||  ||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||      
T  54430510 gttctcctttttgtacataaatctgatgttatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagttatttcattaaaagaattg 54430609  T
Q  258 caacaatcat 267  Q
    ||||||||||    
T  54430610 caacaatcat 54430619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 61 - 267
Target Start/End: Complemental strand, 25599291 - 25599083
Alignment:
Q  61 aaaaattaaatctaatacccaccc--catttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatct-agactct 157  Q
    ||||||||| ||||||| | ||||  || |||||||||||| ||||  |||||||  ||||||||||| |||||| ||||||||||   | | |||||||    
T  25599291 aaaaattaagtctaatatctaccctccacttaaataaaaaaaatat--gttatattcttttctttcttcagtacaggtttgagttttttttttagactct 25599194  T
Q  158 agttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatc 256  Q
    |||||| ||||||||| ||||||| ||| |||||||| |||| ||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  25599193 agttctcctttttgtacataaatctgattctatcaaaccacctctaatttatataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatc 25599094  T
Q  257 acaacaatcat 267  Q
    |||||||||||    
T  25599093 acaacaatcat 25599083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 51064299 - 51064426
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaataaaaaat 100  Q
    ||||||||||||||||||| ||||  ||||||||| |||||||  ||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||    
T  51064299 cttgagggtgtgcaaggtgttcaatcaggccgggcttccaaatactacggacctctaacgaaaaattaaatctaatacccattccacttaaataaaaaat 51064398  T
Q  101 atatatgttatatcattttctttcttta 128  Q
    |||||||||||||| |||||||||||||    
T  51064399 atatatgttatatctttttctttcttta 51064426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 52 - 267
Target Start/End: Original strand, 13401311 - 13401526
Alignment:
Q  52 cctctaacgaaaaattaaatctaatacccaccc--catttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatc 149  Q
    |||| ||| |||| |||| | ||||||||||||  || |||||||||||| || ||||  ||||| |||||||| ||  || |||||| ||||||   ||    
T  13401311 cctcgaacaaaaatttaagtttaatacccaccctacacttaaataaaaaaaatgtatg--atatccttttcttttttcggtccacgtt-gagtttttttc 13401407  T
Q  150 tagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattg 248  Q
    || ||||||||||| ||||||||| ||| ||  |||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||| |||||||    
T  13401408 taaactctagttctcctttttgtacatacattcgatcctatcaaaccactcttaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 13401507  T
Q  249 aaagaatcacaacaatcat 267  Q
     ||||||||||||||||||    
T  13401508 gaagaatcacaacaatcat 13401526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 267
Target Start/End: Complemental strand, 40152332 - 40152126
Alignment:
Q  63 aaattaaatctaatacc-caccccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagtt 161  Q
    ||||||| ||||||||  ||| ||||||||| |||||| ||||||||||  || |||| ||||||  ||||||||||||||||   | ||||||||| ||    
T  40152332 aaattaagtctaatacaacactccatttaaacaaaaaaaatatatgttacttctttttttttcttcggtacacgtttgagttttttt-tagactctaatt 40152234  T
Q  162 cttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaa-gaatcaca 259  Q
    |||||||||  | ||| ||| ||| ||| ||||||| ||| ||||||||||||||||||||| ||||||||||||| ||| |||||| ||| ||||||||    
T  40152233 cttctttttagacatagatctgatgctaccaaatcatccccaatttgtataatcacttaatcggtcaatttgaaaaactatttcattaaaacgaatcaca 40152134  T
Q  260 acaatcat 267  Q
    ||||||||    
T  40152133 acaatcat 40152126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 48627278 - 48627026
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaa 99  Q
    |||||||| |||||||||| ||||  | |||||||||||||| | || |||||||  |  ||||||||| ||||||||||||||| | ||||||||||||    
T  48627278 cttgagggggtgcaaggtgctcaatcaagccgggcctccaaaagctatgggcctcata--aaaaattaactctaatacccacccccacttaaataaaaaa 48627181  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    |||||||||||           |||||||   |||||||||||||   |||||||| |||||||  | | || | ||||||| ||| |||||| | ||||    
T  48627180 tatatatgttac----------ttcttta---cacgtttgagttttt-tctagactttagttctcatatctggacataaatctgatactatcagaccacc 48627095  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
     | ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  48627094 gccaatttgtataatcacttgatcagtcaatttgaaaatctatttcattgaaagaatcacaacaatcat 48627026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 264
Target Start/End: Original strand, 7766983 - 7767127
Alignment:
Q  122 ttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcactta 220  Q
    ||||||||||||||| |||||||   | |||||||| |||||| |||| || | ||||||  ||| ||||||||  |||   ||||||||||||||||||    
T  7766983 ttctttagtacacgtatgagttttttttctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcactta 7767082  T
Q  221 atcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  7767083 atcagtcaatttgaaaagctatttcattgaaagaatcacaacaat 7767127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 148 - 267
Target Start/End: Original strand, 21596282 - 21596402
Alignment:
Q  148 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 246  Q
    ||||||||||| |||| |||| || | ||||||| ||| |||||||| ||| || ||||||||||||||||||||||||| ||||| ||||||| |||||    
T  21596282 tctagactctaattctcctttctggacataaatcagatgctatcaaaccactcccaatttgtataatcacttaatcagtcgatttggaaagctatttcat 21596381  T
Q  247 tgaaagaatcacaacaatcat 267  Q
    |  ||||||||||||||||||    
T  21596382 tacaagaatcacaacaatcat 21596402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 42009377 - 42009262
Alignment:
Q  150 tagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattg 248  Q
    |||||| ||||||| |||| || | ||||||  ||| |||||||| ||||   |||||||||||||||||||||||||||||| ||||| || |||||||    
T  42009377 tagactttagttctactttctggacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttaaaaagttatttcattg 42009278  T
Q  249 aaagaatcacaacaat 264  Q
    ||||||||||||||||    
T  42009277 aaagaatcacaacaat 42009262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 27303189 - 27303251
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  27303189 aatttgtataatcacttaatcaatcaatttgaaaagctatttcattgaaagaatcacaacaat 27303251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 36538248 - 36538186
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  36538248 aatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaat 36538186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 46904744 - 46904806
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||    
T  46904744 aatttgtataatcacttaatcagtcaatttaaaaaactatttcattgaaagaatcacaacaat 46904806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 50677376 - 50677314
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  50677376 aatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaacaatcacaacaat 50677314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 1649909 - 1649853
Alignment:
Q  187 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt 243  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||    
T  1649909 ctatcaaatcacccccaatttgtataatcacttaatcattcaatttgaaaatctatt 1649853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 260
Target Start/End: Complemental strand, 19965992 - 19965884
Alignment:
Q  153 actctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaa 251  Q
    |||||| |||| ||||||| | ||||||| ||| |||||||| |||  | |||||||||||||||||||| ||| || ||||||||||| |||||| |||    
T  19965992 actctaattctcctttttggacataaatctgatgctatcaaaccactgccaatttgtataatcacttaattagttaaattgaaaagctatttcattaaaa 19965893  T
Q  252 gaatcacaa 260  Q
    |||||||||    
T  19965892 gaatcacaa 19965884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 1255158 - 1255057
Alignment:
Q  157 tagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaat 255  Q
    ||||||||||||||| | ||||||| ||| ||||||||  |||  ||||||||||||| |||||||| ||||||||  |||| || ||||||||||||||    
T  1255158 tagttcttctttttggacataaatctgatgctatcaaacgacctttaatttgtataatgacttaatcggtcaatttagaaagttatttcattgaaagaat 1255059  T
Q  256 ca 257  Q
    ||    
T  1255058 ca 1255057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 264
Target Start/End: Original strand, 51146867 - 51147001
Alignment:
Q  130 tacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaa 229  Q
    ||||||| |||||||   |||||| ||||||||  ||||||| | ||||||  ||| |||| ||| ||||   |||||| ||| ||||||||||||||||    
T  51146867 tacacgtatgagtttttttctagattctagttccactttttggacataaatttgatgctattaaaccaccatcaatttgaata-tcacttaatcagtcaa 51146965  T
Q  230 tttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    ||| |||| ||| || ||||||||||||||||||||    
T  51146966 tttaaaaaactattttattgaaagaatcacaacaat 51147001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 43905958 - 43905865
Alignment:
Q  150 tagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt 243  Q
    |||||| ||||||| || | || | ||||||| | | ||||||||  ||||  |||||||||||||||| ||||||||||||||||||| ||||    
T  43905958 tagactttagttctcctatctggacataaatctggtactatcaaactaccctcaatttgtataatcactcaatcagtcaatttgaaaagttatt 43905865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 265
Target Start/End: Complemental strand, 4207416 - 4207357
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagctattcattgaaagaatcacaacaatc 265  Q
    |||||||||||||||||||||| |||||||| |||| |||   || |||||||||||||||||    
T  4207416 aatttgtataatcacttaatcattcaatttggaaagatat---ttcaaagaatcacaacaatc 4207357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 267
Target Start/End: Original strand, 20762052 - 20762116
Alignment:
Q  204 atttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||| |||||| |||||| ||  ||| |||||||||||||||| |||||||||    
T  20762052 atttgtataatcacttgatcagttaatttggaagtctatttcattgaaagaatcataacaatcat 20762116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 43906020 - 43905976
Alignment:
Q  61 aaaaattaaatctaatacccaccccatttaaataaaaaatatata 105  Q
    ||||||||| |||| || |||||||| ||||||||||||||||||    
T  43906020 aaaaattaactctattatccaccccacttaaataaaaaatatata 43905976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 7857885 - 7858152
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaataaaaaat 100  Q
    ||||||||||||||||||| ||||| ||| ||||||||||| || ||||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  7857885 cttgagggtgtgcaaggtgctcaaccaggtcgggcctccaattgctacgggcttctaacgaaaaattaaatttaatacccaccccacttaaataaaaaat 7857984  T
Q  101 atatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcaccc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||| | ||||||||||||||||||||||||||    
T  7857985 atatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgaacataaatcggatcctatcaaatcaccc 7858084  T
Q  201 ctaatttgtataatcacttaatcagtcaatttgaaaagct-attcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||||||||||||||||| |||| | ||||||| |||||||||||||||||||    
T  7858085 ctaatttgtataatcacttaatcagtcaatttggaaagttaattcatttaaagaatcacaacaatcat 7858152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 18420877 - 18420606
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccc--catttaaataaaaa 98  Q
    ||||| ||||||||||||  ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||  || |||||||||||    
T  18420877 cttgatggtgtgcaaggttttcaactaggtcgggcctccaaatgttacgggcttctaacgaaaaattaaatctaatacccaccctccacttaaataaaaa 18420778  T
Q  99 atatatat--gttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatc 196  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||   || ||||||||||||| ||||||||| ||||||| |||||||||||| |    
T  18420777 atatatatatgttatatcattttctttctttagtacacgtttgagtttttttccagactctagttctcctttttgtacataaatcagatcctatcaaacc 18420678  T
Q  197 acccctaatttgtataatcacttaatcagtcaatttgaaaagct-attcattgaaagaatcacaacaatcat 267  Q
    || | |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  18420677 acacttaatttgtataatcacttaatcagtcaatttgaaaagctgtttcattgaaagaatcacaacaatcat 18420606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 2 - 267
Target Start/End: Complemental strand, 43968334 - 43968067
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatt-taaataaaaaat 100  Q
    ||||| |||||||||||| ||||  |||  |||||||||||| |||| |||||||||||||||||||||||||||||||||||||   | |||||||||     
T  43968334 ttgagagtgtgcaaggtgctcaatcaggttgggcctccaaatattacaggcctctaacgaaaaattaaatctaatacccaccccacacttaataaaaaaa 43968235  T
Q  101 atatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcaccc 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| |||||||||||||||||||| ||| |    
T  43968234 atatatgttatatccttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccactc 43968135  T
Q  201 ctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||    
T  43968134 ctaatttgtataatcacttaatcaatcaatttgaaaagttatttcattgaaagaatcacaacaatcat 43968067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 5 - 267
Target Start/End: Original strand, 13585103 - 13585366
Alignment:
Q  5 agggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaatat 102  Q
    ||||||||||||||| ||||  || |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||    
T  13585103 agggtgtgcaaggtgctcaatcagaccgggccttcaaatgcaacgggcctctaacgaaaaattaaatctaatacccaccccccatttaactaaaaaatat 13585202  T
Q  103 atatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccct 202  Q
      ||||||||||||||||||||||||||||||||||||||||   |||||||||||||| |  |||||||| ||||||| |||||||||||| |||||||    
T  13585203 --atgttatatcattttctttctttagtacacgtttgagtttttttctagactctagttttcttttttgtacataaatcagatcctatcaaaccacccct 13585300  T
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  13585301 aatttgtataatcaattaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcat 13585366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 43926589 - 43926320
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatttaaataaaaa 98  Q
    ||||||||||||||||||| ||||  ||| |||| |||||||||  |||||||||||| |||||||||||| |||||||||||  ||| |||||||||||    
T  43926589 cttgagggtgtgcaaggtgctcaatcaggtcgggtctccaaatgccacgggcctctaaggaaaaattaaatttaatacccacctcccacttaaataaaaa 43926490  T
Q  99 atatatatgttatatcattttctttc-tttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcctatcaaatc 196  Q
    ||||||||||||||||  ||| | || ||||||||||||||||||||   | ||||||||||||||| |||||||||||||||||||||||||||||| |    
T  43926489 atatatatgttatatc--tttatatcatttagtacacgtttgagttttttttctagactctagttctactttttgtatataaatcggatcctatcaaacc 43926392  T
Q  197 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43926391 acccataatttgtataattacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcat 43926320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 44665307 - 44665043
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    |||||||||||| |||||| ||||  | |||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||  | |||||||||||    
T  44665307 cttgagggtgtgtaaggtgctcaatcaagccgggcctccaaatgctacgggcctctaacgcataattaaatctaatacccacccctcacttaaataaaaa 44665208  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatc-tagactctagttcttctttttgtatataaatcggatcctatcaaatca 197  Q
    ||||||  |||||||| |||||||||||    ||||||||||||||   |  |||||||||||||| ||||||||| |||||||||||||||||||| ||    
T  44665207 atatat--gttatatctttttctttctt----acacgtttgagttttttttatagactctagttctcctttttgtacataaatcggatcctatcaaacca 44665114  T
Q  198 cccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    || ||||||||||| ||||||||||||||| ||||| |||| || ||||||||||||||||||||||||||    
T  44665113 cctctaatttgtatcatcacttaatcagtctatttggaaagttatttcattgaaagaatcacaacaatcat 44665043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 42952040 - 42951774
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    ||||||||||||||||||| || |  ||  ||| | || ||||| || |||| |||| |||||||||||||||||||||||||||  | |||||||||||    
T  42952040 cttgagggtgtgcaaggtgctcgatcagttcggacttctaaatgctatgggcttctagcgaaaaattaaatctaatacccaccccccacttaaataaaaa 42951941  T
Q  99 ata-tatatgttatatcattttctttctttagtacacgtttgagtttaaat----ctagactctagttcttctttttgtatataaatcggatcctatcaa 193  Q
    | | |||||||||||||||||||||||||||||||||||||||||||   |    |||||||||||||||  |||||||| |||||||| ||||||||||    
T  42951940 aaaatatatgttatatcattttctttctttagtacacgtttgagttttttttcttctagactctagttctcatttttgtacataaatcgaatcctatcaa 42951841  T
Q  194 atcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 259  Q
    | ||| ||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||    
T  42951840 accactcctaatttgtataatcacttaatcagtcaatttgaaaagttattttattgaaagaatcaca 42951774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 3471392 - 3471667
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    |||| ||| ||||||| || ||||| ||| ||| |||||||||| |||||||||| ||| ||||||||| | |||||||||||||  | |||||||||||    
T  3471392 cttgggggagtgcaagatgctcaaccaggtcggacctccaaatgctacgggcctcaaacaaaaaattaagtgtaatacccaccccccacttaaataaaaa 3471491  T
Q  99 atata-tatgttatatcattttctttctttagtacacgtttgagtttaaat-----ctagactctagttcttctttttgtatataaatcggatcctatca 192  Q
    | | | ||||||||||||||||||||||| ||||||| |||||||||   |     ||||| |||||||||  |||||||| ||||||  ||| ||||||    
T  3471492 aaaaaatatgttatatcattttctttcttcagtacacatttgagttttttttctttctagaatctagttctcatttttgtacataaatgtgattctatca 3471591  T
Q  193 aatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3471592 aaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcat 3471667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 3445481 - 3445661
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaa 99  Q
    ||||||||||||||||||| ||||  || ||||| || |||||| ||||||  ||||||||| |||||||||||||||||||||| | ||||||||||||    
T  3445481 cttgagggtgtgcaaggtgctcaatgagaccgggtcttcaaatgctacgggtttctaacgaagaattaaatctaatacccacccccacttaaataaaaaa 3445580  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatc 181  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||   | |||||||||||||| ||||||||| |||||||    
T  3445581 tatatatgttatatctttttctttctttagtacacgtttgaattt-tttttagactctagttctcctttttgtacataaatc 3445661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 61 - 264
Target Start/End: Complemental strand, 32098383 - 32098178
Alignment:
Q  61 aaaaattaaatctaatacccacccc--atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactcta 158  Q
    ||||||||| |||||||||||||||  | |||| ||||||||||||||||||  || ||||||||||| |||||||||||||||||   |||||||||||    
T  32098383 aaaaattaagtctaatacccaccccccacttaattaaaaaatatatatgttacttctttttctttcttcagtacacgtttgagttttt-tctagactcta 32098285  T
Q  159 gttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatca 257  Q
    ||| | ||||||| | ||||||  ||| |||||||| ||| | |||||||||| ||||||||||||||||||||| ||| ||| ||||||||||||||||    
T  32098284 gttatcctttttggacataaatttgatgctatcaaaccactcttaatttgtatgatcacttaatcagtcaatttggaaaactatttcattgaaagaatca 32098185  T
Q  258 caacaat 264  Q
    |||||||    
T  32098184 caacaat 32098178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 34524200 - 34523948
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaa 99  Q
    |||||||| |||||||||| ||||  | ||||| |||||||| | ||||||||||  |  ||||||||||||||||||||||||| | ||||||||||||    
T  34524200 cttgagggagtgcaaggtgctcaatcaagccggacctccaaaagctacgggcctcaga--aaaaattaaatctaatacccacccccacttaaataaaaaa 34524103  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    |||||||||||           |||||||   |||||||||||||   |||||||| ||||||| || | || | ||||||| | | |||||||| ||||    
T  34524102 tatatatgttac----------ttcttta---cacgtttgagttttt-tctagactttagttctcctatctggacataaatctggtactatcaaaccacc 34524017  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34524016 cccaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcat 34523948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 102 - 267
Target Start/End: Original strand, 18112011 - 18112183
Alignment:
Q  102 tatatgttatatcattttctttctttagtacacgtttgagtttaaat------ctagactctagttcttctttttgtatataaatcggatcctatcaaat 195  Q
    |||||||||||||||||||||||||||||| ||||||||||||   |      ||||| |||||||||  ||| |||| |||||||||||| |||||||     
T  18112011 tatatgttatatcattttctttctttagtatacgtttgagtttttttttctttctagaatctagttctcttttatgtacataaatcggatcatatcaaac 18112110  T
Q  196 cacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||| |||||||||||||||||||||||||||||||||| ||| ||| || |||||||||||||||||||||||    
T  18112111 cactcctaatttgtataatcacttaatcagtcaatttggaaaactattttattgaaagaatcacaacaatcat 18112183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 267
Target Start/End: Complemental strand, 5869579 - 5869319
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccc-catttaaataaaaaat 100  Q
    ||||||| |||||||||| || || |||||||||||||||||| ||| |||||  ||   |||||||  |||||||||||||| | | |||||||||||     
T  5869579 ttgagggagtgcaaggtgctctaccaggccgggcctccaaatggtactggcctaaaa---aaaattatgtctaatacccaccctcgtctaaataaaaaaa 5869483  T
Q  101 atatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcaccc 200  Q
    | ||||||||  |  |||||||| || |||||||| ||||||||   | |||||| ||||||| |||| |||| |||||| | || |||||||| ||||     
T  5869482 a-atatgttacttatttttctttattcagtacacgattgagttttttt-tagactttagttctcctttctgtacataaattg-atactatcaaaccacca 5869386  T
Q  201 ctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    | ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5869385 c-aatttttaaaatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcat 5869319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 27074384 - 27074641
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--ttaaataaaaa 98  Q
    |||||||| ||||||| || |||| |||  ||||||| ||||||  | || |||| ||| ||||||||| |||||||| ||| || |  |||||||||||    
T  27074384 cttgagggagtgcaagatgctcaattagatcgggccttcaaatgcaatggacctcaaacaaaaaattaagtctaatactcactccctacttaaataaaaa 27074483  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    | |||||||||||||||||||||||||| | ||| |           | ||   |||||||| || ||||||||| ||||||| |||||||||||| |||    
T  27074484 a-atatatgttatatcattttctttcttcaatactc-----------actccctactctagtactcctttttgtacataaatctgatcctatcaaaccac 27074571  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||||||||||||||||| |||  ||| |||||||||| |||||||||||||||    
T  27074572 ccctaatttgtataatcacttaatcagtcaatttaaaagtctatttcattgaaaaaatcacaacaatcat 27074641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 1003958 - 1004032
Alignment:
Q  72 ctaatacccacccc--atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttt 144  Q
    ||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1003958 ctaatacccaccccccacttaaataaaaaatatatatgttatatcattttctttctttagtacatgtttgagttt 1004032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 264
Target Start/End: Complemental strand, 3628889 - 3628747
Alignment:
Q  122 ttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaa 221  Q
    ||||| ||||||||| |||||||   |||||||||||||||| | || ||   ||||||  ||| |||||||| ||||  |||||||||||||||| |||    
T  3628889 ttcttcagtacacgtatgagttttt-tctagactctagttctacattctggtcataaatttgatgctatcaaaccaccattaatttgtataatcacataa 3628791  T
Q  222 tcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    ||||||||||||||||| || |||||||||||||||||||||||    
T  3628790 tcagtcaatttgaaaagttatttcattgaaagaatcacaacaat 3628747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 41666141 - 41666058
Alignment:
Q  61 aaaaattaaatctaatacccaccccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttt 144  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||||||||  |||| |||||||||  ||||||||||||||||    
T  41666141 aaaaattaagtctaataccaaccccacttaaataaaaaatatatatgttacttcatcttctttcttcggtacacgtttgagttt 41666058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 264
Target Start/End: Complemental strand, 23567352 - 23567274
Alignment:
Q  187 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||  ||| ||||||||||| |||||||||||    
T  23567352 ctatcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaatactatttcattgaaagtatcacaacaat 23567274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 12531561 - 12531626
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||    
T  12531561 aatttgtataatcacttaatcagtcaatttaaaaatctatttcattgaaagaatcacaacaatcat 12531626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 1004056 - 1004126
Alignment:
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta--ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||||||||||||||||||||||  |   ||||||||||||||||||||||||||    
T  1004056 ccctaatttgtataatcacttaatcagtcaatttgaaaaaattatttcattgaaagaatcacaacaatcat 1004126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 264
Target Start/End: Complemental strand, 39698016 - 39697938
Alignment:
Q  187 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||||| |||| | ||||||||| |||| ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  39698016 ctatcaaaccaccaccaatttgtatgatcatttaattagtcaatttgaaaagctatttcattgaaagaatcacaacaat 39697938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 18111613 - 18111717
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatttaaataaaaa 98  Q
    ||||||||||||||||||| ||||  ||| ||| |||||||||| || ||| ||||| ||||||||||||||||| |||||||  | | |||||||||||    
T  18111613 cttgagggtgtgcaaggtgctcaatcaggtcggacctccaaatgctatgggtctctatcgaaaaattaaatctaacacccaccctcaacttaaataaaaa 18111712  T
Q  99 atata 103  Q
    |||||    
T  18111713 atata 18111717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 264
Target Start/End: Original strand, 35874840 - 35874990
Alignment:
Q  116 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccct--aatttgtataa 213  Q
    ||||||||||| ||||||||| |||||||   |||||||||||||||| |||| || ||||||||  ||| |||||||| |||      |||||||||||    
T  35874840 ttttctttcttcagtacacgtatgagttttt-tctagactctagttctactttctggatataaatttgatgctatcaaaccactatatcaatttgtataa 35874938  T
Q  214 tcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||||||| ||||||||||||| ||| ||| | ||||||| |||||||||    
T  35874939 tcacttaatcggtcaatttgaaaaactatttcttagaaagaaccacaacaat 35874990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 267
Target Start/End: Complemental strand, 30915403 - 30915284
Alignment:
Q  150 tagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcatt- 247  Q
    ||||||||| |||| |||| || | ||| ||| ||| ||| |||| | || | ||| ||||||||||||||||||||||||||||||||||| ||||||     
T  30915403 tagactctaattctcctttctggacatagatctgatgctaccaaacctcctccaatatgtataatcacttaatcagtcaatttgaaaagctatttcatta 30915304  T
Q  248 gaaagaatcacaacaatcat 267  Q
     |||||||||||||||||||    
T  30915303 aaaagaatcacaacaatcat 30915284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 29372359 - 29372424
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagctattc-attgaaagaatcacaacaatcat 267  Q
    |||||||||||||| |||||||||||||||| |||| ||||| ||||||||||| |||||||||||    
T  29372359 aatttgtataatcatttaatcagtcaatttggaaagttattcaattgaaagaatgacaacaatcat 29372424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 42076110 - 42076165
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagctat-tcattgaaagaatca 257  Q
    |||||||||||| ||||||||| |||||||||||||||||  ||||||||||||||    
T  42076110 aatttgtataataacttaatcaatcaatttgaaaagctataacattgaaagaatca 42076165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 12531432 - 12531482
Alignment:
Q  60 gaaaaattaaatctaatacccaccccatttaaataaaaaatatatatgtta 110  Q
    ||||||| || |||||||||||||||| |||||||||||||| ||||||||    
T  12531432 gaaaaatcaactctaatacccaccccacttaaataaaaaatagatatgtta 12531482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 5971818 - 5971758
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagctattcattgaaagaatcacaacaatca 266  Q
    ||||| ||| |||||||||||||||||||| |||||||||   || ||||||||||||||||||    
T  5971818 aatttctatcatcacttaatcagtcaatttaaaaagctat---tttaaagaatcacaacaatca 5971758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 39698130 - 39698079
Alignment:
Q  60 gaaaaattaaatctaatacccacc-ccatttaaataaaaaatatatatgtta 110  Q
    |||||||||| | ||||||||||| ||| |||||||||||||||||||||||    
T  39698130 gaaaaattaactttaatacccacctccacttaaataaaaaatatatatgtta 39698079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 23567464 - 23567418
Alignment:
Q  61 aaaaattaaatctaatacccaccccatttaaataaaaaatatatatg 107  Q
    ||||||||| ||| |||||||| ||| ||||||||||||||||||||    
T  23567464 aaaaattaactctgatacccactccacttaaataaaaaatatatatg 23567418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 2546037 - 2545957
Alignment:
Q  148 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaa 229  Q
    |||||||||||||||| ||| ||  | |||| ||| || ||||||||||||||| || || |||||||||||||||| ||||    
T  2546037 tctagactctagttctccttatttgacataattcgcatgctatcaaatcacccc-aaattatataatcacttaatcaatcaa 2545957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 46221968 - 46221700
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaa 99  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| | ||||||||||||    
T  46221968 cttgagggtgtgcaaggtgctcaactaggccgggcctccaaatgctacggacctctaacgaaaaattaaatctaatacccacccctacttaaataaaaaa 46221869  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    |||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||  |||||||| |||||||| |||||||||||  |||    
T  46221868 tatatatgttatatcattttctttctttagtatacgtttgagtttttttctagactctagttctcttttttgtacataaatcgaatcctatcaaactacc 46221769  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  46221768 cctaatttgtagaatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcat 46221700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 2 - 270
Target Start/End: Complemental strand, 8358558 - 8358288
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccc-catttaaataaaaaat 100  Q
    |||||||||||||||||| ||| | |||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||| || |||||||||||||    
T  8358558 ttgagggtgtgcaaggtgctcatccaggccgggcctccaaatgctacgggcctctaacaaaaaattaaatctaatatccaccctcacttaaataaaaaat 8358459  T
Q  101 atatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcaccc 200  Q
    ||||||||||||||||||||||||||||||| ||||||||||||   |||||||| ||||||| ||||||||| |||||||||||||||||||| |||||    
T  8358458 atatatgttatatcattttctttctttagtatacgtttgagtttttctctagactttagttctcctttttgtacataaatcggatcctatcaaaccaccc 8358359  T
Q  201 ctaatttgtataatcacttaatcagtcaatttgaaaagctat-tcattgaaagaatcacaacaatcatatt 270  Q
    ||||||| |||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||    
T  8358358 ctaatttatataatcacttaatcagtcaatttaaaaagttatctcattgaaagaatcacaacaatcatatt 8358288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 8 - 264
Target Start/End: Complemental strand, 18015839 - 18015582
Alignment:
Q  8 gtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaatatatat 106  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  18015839 gtgtgcaagatgctcaaccaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccccacttaaataaaaaatatatat 18015740  T
Q  107 gttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatt 206  Q
    |||||||| |||||||||||||||||| ||||||||||   |||||||||||||| | ||||||||| |||||||||||||||||||| |||||||||||    
T  18015739 gttatatccttttctttctttagtacatgtttgagttttt-tctagactctagttttcctttttgtacataaatcggatcctatcaaaccacccctaatt 18015641  T
Q  207 tgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||    
T  18015640 tgtataatcacttaatcaatcaatttggaaagctatttcattgaaagaatcacaacaat 18015582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 4 - 267
Target Start/End: Complemental strand, 33419379 - 33419114
Alignment:
Q  4 gagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaataaaaaatata 103  Q
    ||||||| ||| |||| ||||| |||||||| |||||||| |||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  33419379 gagggtgagcatggtgctcaaccaggccgggtctccaaatattacggtcctctaacgaaaaattaaatctaataaccaccccacttaaataaaaaatata 33419280  T
Q  104 tatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcaccccta 203  Q
    ||||||||||| ||||||||||||| |||||||||||||||   ||||||||||||||||| |||||||| ||||||||||||||||||||  |||||||    
T  33419279 tatgttatatccttttctttctttaatacacgtttgagtttttttctagactctagttcttgtttttgtacataaatcggatcctatcaaactaccccta 33419180  T
Q  204 atttgtataatcacttaa-tcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||| ||||||    
T  33419179 atttgtataatcacttaattaagtcaatttgaaaagttatttcattgaaagaatcacaataatcat 33419114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 33909865 - 33910131
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    |||| |||||||||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||||||| |||||||||||||||  | |||||||||||    
T  33909865 cttgggggtgtgcaaggtgctcaaccaggccgggcctccaaatgctacgggcctcaaacaaaaaattaagtctaatacccacccctcacttaaataaaaa 33909964  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    | | ||||||||||||  ||||||||||  ||||||||||||||||   |||||||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  33909965 aaa-atatgttatatc--tttctttcttcggtacacgtttgagtttttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcac 33910061  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33910062 ccctaatttgtataatcgcttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcat 33910131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 42161388 - 42161125
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||| |||||||||||||||||||||||||| ||||| || ||||  | |||||||||||    
T  42161388 cttgagggtgtgcaaggtgctcaaccaggccgagcctccaaatgctacgggcctctaacgaaaaattaaatttaatatcctccccccacttaaataaaaa 42161289  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc--tatcaaatc 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||  |||||||| |||||| ||||||  ||||||| |    
T  42161288 atatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctaattctcatttttgtacataaattggatcctatatcaaacc 42161189  T
Q  197 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 259  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||||    
T  42161188 acccctaatttgtataatcacttgatcagttaatttggaaagctatttcattgaaagaatcaca 42161125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 29 - 267
Target Start/End: Original strand, 4099794 - 4100035
Alignment:
Q  29 gccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatttaaataaaaaatatatatgttatatcattttctttctt 126  Q
    |||||| ||||||||| ||||||| |||||||||||||||||| |||||||||||  ||| ||||||||||||||||||||||||||| |||||||||||    
T  4099794 gccgggtctccaaatgctacgggcttctaacgaaaaattaaatttaatacccacctcccacttaaataaaaaatatatatgttatatccttttctttctt 4099893  T
Q  127 tagtacacgtttgag-tttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcag 225  Q
    ||||||||||||||| |||   ||||||| ||| |||| ||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||     
T  4099894 tagtacacgtttgagttttttttctagacgctaattctcctttttgtacataaatcggat-ctatcaaaccacccctaatttgtataatcacttaatcaa 4099992  T
Q  226 tcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||| |||||||||||||| |||||||||||    
T  4099993 tcaatttgaaaagctatttcattgaaagaattacaacaatcat 4100035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 36796635 - 36796369
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatttaaataaaaa 98  Q
    ||||||| ||||||||||| ||||| ||||||| |||||||||  ||||| ||||||||||||||| ||||||||||||||||  |||||||||||||||    
T  36796635 cttgaggctgtgcaaggtgctcaaccaggccgg-cctccaaatactacggacctctaacgaaaaat-aaatctaatacccacctcccatttaaataaaaa 36796538  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagact-ctagttcttctttttgtatataaatcggatcctatcaaatca 197  Q
    |||||||||||||||||||| |||||||||||||||||||||||||   |||||||| |||||||| ||||||||| ||||||||||||||||||||  |    
T  36796537 atatatatgttatatcattt-ctttctttagtacacgtttgagttttt-tctagacttctagttctcctttttgtacataaatcggatcctatcaaacta 36796440  T
Q  198 cccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||| ||||||||||||| |||||||||||||||||| |||  || ||||||||||||||||||||||||||    
T  36796439 cccttaatttgtataataacttaatcagtcaatttggaaaattatttcattgaaagaatcacaacaatcat 36796369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 48 - 267
Target Start/End: Original strand, 11672429 - 11672653
Alignment:
Q  48 cgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttta 145  Q
    ||||||| |||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  11672429 cgggcctttaacgaaaaattaaatctaatatccaccccccacttaaataaaaaatatatatgttatatcattttctttctttagtacacatttgagtttt 11672528  T
Q  146 aatctagactctagttcttctttttgt--atataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-t 242  Q
      |||||||||||||||| ||||||||  |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||| || |    
T  11672529 tttctagactctagttctcctttttgtacatataaatcggatcctatcaaaccactcctaatttgtataatcacttaatcagtcaatttggaaagttatt 11672628  T
Q  243 tcattgaaagaatcacaacaatcat 267  Q
    ||| |||||||||||||||||||||    
T  11672629 tcaatgaaagaatcacaacaatcat 11672653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 2 - 270
Target Start/End: Complemental strand, 6380349 - 6380078
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--ttaaataaaaaa 99  Q
    ||||||| | |||||||| | ||| |||||||||||||||||   || |||||| ||| ||||||||| ||||||| |||| || |  ||||||||||||    
T  6380349 ttgagggagcgcaaggtgcttaaccaggccgggcctccaaataccacaggcctcaaacaaaaaattaagtctaatatccactccctacttaaataaaaaa 6380250  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
     ||||||||||||||||||| ||||||||||||||||||||||||   | ||||||||||||||||||||||||| || |||| |||||||||||| |||    
T  6380249 -atatatgttatatcattttatttctttagtacacgtttgagttttttttctagactctagttcttctttttgtacatgaatctgatcctatcaaaccac 6380151  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcatatt 270  Q
    |||||||||||||||||||||||||| |||||||| ||  ||| |||||||||||||||||||||||||||||    
T  6380150 ccctaatttgtataatcacttaatcaatcaatttggaagtctatttcattgaaagaatcacaacaatcatatt 6380078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 44894298 - 44894026
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatac----ccacccc--atttaaata 94  Q
    ||||||| ||| |||| || ||||| ||| |||||||||||||| |||||  ||||||  ||||||||||||||||||    |||||||  |||||||||    
T  44894298 cttgaggatgtacaagatgctcaaccaggtcgggcctccaaatgctacggatctctaagaaaaaattaaatctaatacatacccacccctcatttaaata 44894199  T
Q  95 aaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaa 194  Q
    |||||||||||||||||||| || | |  |||||||||||||||||||||   |||||||| ||||||||||||||||| |||||||||||||||| |||    
T  44894198 aaaaatatatatgttatatctttatatc-ctttagtacacgtttgagtttttttctagactatagttcttctttttgtacataaatcggatcctattaaa 44894100  T
Q  195 tcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
     ||||||||||||||||||||||||||||| |||||||| ||||||| || |||||||||||||||||||||||    
T  44894099 ccacccctaatttgtataatcacttaatcaatcaatttggaaagctattttattgaaagaatcacaacaatcat 44894026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 170
Target Start/End: Original strand, 38524984 - 38525154
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaaa 99  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||  | ||| ||||||||||||    
T  38524984 ttgagggtgtgcaaggtgctcaaccaggccgggcctccaaatgctacggacctctaacgaaaaattaaatctaatacccactctccacttaaataaaaaa 38525083  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttcttttt 170  Q
    ||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||| || |||||    
T  38525084 tatatatgttatatctttttctttctttagtacacgtttgagtttttttctagactctagttttttttttt 38525154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 12251653 - 12251466
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccc--catttaaataaaaa 98  Q
    ||||||||||||||||||  ||||  ||||||| |||||||||| |||| ||||||| | ||||||||||||||||||||||||  || |||||||||||    
T  12251653 cttgagggtgtgcaaggtactcaatcaggccggacctccaaatgctacgagcctctatcaaaaaattaaatctaatacccaccctccacttaaataaaaa 12251554  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc 187  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| |||||||||||||    
T  12251553 atatatatgttatctcattttctttctttagtacacgtttgagttt-tttctagactctagttctcctttttgtacataaatcggatcc 12251466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 61 - 267
Target Start/End: Complemental strand, 7636536 - 7636323
Alignment:
Q  61 aaaaattaaatctaatacccacc--ccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat-----ctaga 153  Q
    ||||||||| ||||| |||||||  ||| |||||||||||| |||| ||||||||| |||||||| ||  |||||||||| |||||   |     |||||    
T  7636536 aaaaattaagtctaacacccacctcccacttaaataaaaaa-atatgtgttatatctttttcttttttcggtacacgtttaagtttttttttcttctaga 7636438  T
Q  154 ctctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaag 252  Q
    ||||| |||| | ||||||| |||| || |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  7636437 ctctacttctcccttttgtacataactctgatcctatcaaaccacccctaatttgtataattacttaatcagtcaatttgaaaagctatttcattgaaag 7636338  T
Q  253 aatcacaacaatcat 267  Q
    |||| ||||||||||    
T  7636337 aatcgcaacaatcat 7636323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 26282791 - 26282539
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaa 99  Q
    |||||||| |||||||||  ||||  | |||||||||||||| | ||  ||||||  |  ||||||||| ||||||||||||||| | ||||||||||||    
T  26282791 cttgagggagtgcaaggtactcaatcaagccgggcctccaaaagctataggcctcaga--aaaaattaactctaatacccacccccacttaaataaaaaa 26282694  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    |||||||||||           |||||||   |||||||||||||   |||||||| ||||||| || | || | ||||||| | | |||||||| ||||    
T  26282693 tatatatgttac----------ttcttta---cacgtttgagttttt-tctagactttagttctcctatctgcacataaatctggtactatcaaaccacc 26282608  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26282607 cccaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcat 26282539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 40001944 - 40001694
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaa 99  Q
    |||||| | |||||||||| |||| || |||||||||||||| | || ||||||  ||   |||||||| ||||||||||||||| | ||||||||||||    
T  40001944 cttgagagagtgcaaggtgctcaattaagccgggcctccaaaagctatgggcctaaaa---aaaattaactctaatacccacccctacttaaataaaaaa 40001848  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    |||||||||||           |||||||   |||||||||| ||   |||||||| |||||||||| | || | ||||||| | | |||||||| ||||    
T  40001847 tatatatgttac----------ttcttta---cacgtttgaggtttt-tctagactttagttcttctatctgaacataaatctggtactatcaaaccacc 40001762  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatca 266  Q
     | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40001761 tccaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 40001694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 63 - 267
Target Start/End: Original strand, 26633227 - 26633430
Alignment:
Q  63 aaattaaatctaatacccaccccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttc 162  Q
    ||||||| | ||||||||||||||  | ||  |||||| || ||||||  || |||||||||||  |||||||| |||||||   |||||||||||||||    
T  26633227 aaattaagtataatacccaccccaacttaaagaaaaat-tacatgttacttctttttctttcttcggtacacgtatgagttttt-tctagactctagttc 26633324  T
Q  163 ttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaac 261  Q
    | |||| || | ||||||  ||| |||| ||| ||||   ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26633325 tactttctggacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaac 26633424  T
Q  262 aatcat 267  Q
    ||||||    
T  26633425 aatcat 26633430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 96 - 264
Target Start/End: Original strand, 32956670 - 32956839
Alignment:
Q  96 aaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaat 195  Q
    |||| ||||||||||  || |||||||||||  ||||||||||||||||   | |||||||||||||| |||| || | ||||||| ||| ||||||||     
T  32956670 aaaaaatatatgttacttctttttctttcttcggtacacgtttgagtttttttttagactctagttctcctttctggacataaatctgatgctatcaaac 32956769  T
Q  196 cacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||| ||||| |||||||| |||||||||||||||  |||| || |||||||||||||||||||||||    
T  32956770 cacccccaatttttataatcatttaatcagtcaatttataaagttatttcattgaaagaatcacaacaat 32956839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 773974 - 773881
Alignment:
Q  175 ataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||| ||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||| || |||||||||||||||||||||||    
T  773974 ataaatctgatgctatcaaatcacccctaatttgtataattactttatcagtcaatttgaaaagctattttattgaaagaatcacaacaatcat 773881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 25061703 - 25061957
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--ttaaataaaaa 98  Q
    |||| ||| |||||||||| ||||| | ||||| ||||||||| ||| ||||||  ||  ||||||||| ||||||| ||||||| |  |||||||||||    
T  25061703 cttgggggagtgcaaggtgctcaaccaagccggacctccaaatattatgggcctaaaaa-aaaaattaagtctaatatccaccccctacttaaataaaaa 25061801  T
Q  99 atata-tatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatca 197  Q
    | | | |||||||  || |||||||||||  |||||||||| | |||   | |||||||||||||||||||||| | ||||||| ||| ||||||||  |    
T  25061802 aaaaaatatgttacttctttttctttcttcggtacacgttttaatttt--tttagactctagttcttctttttggacataaatctgatgctatcaaacta 25061899  T
Q  198 cccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaa 254  Q
      |  |||||||| |||||||| |||||| |||||||||||||| |||||||||||||    
T  25061900 ttctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 25061957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 87 - 267
Target Start/End: Original strand, 41908064 - 41908245
Alignment:
Q  87 tttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttcttttt-gtatataaatcggat 185  Q
    ||||||||||||| | ||||||||  || |||||||||||  ||||| ||||||||||   ||| |||||| |||||  ||||| | | ||||||| |||    
T  41908064 tttaaataaaaaaaa-atatgttacttctttttctttcttcggtacatgtttgagtttttttcttgactctggttctcattttttggacataaatctgat 41908162  T
Q  186 cctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagct-attcattgaaagaatcacaacaatcat 267  Q
     || ||||| |||| | |||||||| |||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||    
T  41908163 gctttcaaaccacctccaatttgtacaatcacttaatcagtcaattagaaaagctgtttcattgaaagaatcacaacaatcat 41908245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 27432391 - 27432476
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccca 86  Q
    |||||||||||| |||||| ||||| ||||| ||||| |||||| |||||||||||||||||||||||||| ||||||||||||||    
T  27432391 cttgagggtgtgtaaggtgctcaaccaggcccggccttcaaatgctacgggcctctaacgaaaaattaaatttaatacccacccca 27432476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 188 - 267
Target Start/End: Complemental strand, 12251365 - 12251285
Alignment:
Q  188 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||| |||||||||||| |||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  12251365 tatcaaaccacccctaatttctataatcatttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcat 12251285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 267
Target Start/End: Original strand, 30739038 - 30739190
Alignment:
Q  116 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 215  Q
    |||||||| ||  ||||||||||||||||   |||||| || | |||| |||| || | ||||||||||| |||||||| || |   ||||| |||||||    
T  30739038 ttttcttttttcggtacacgtttgagtttttttctagattccaattctcctttctggacataaatcggatgctatcaaaccatcttcaatttttataatc 30739137  T
Q  216 acttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||||||| || |||||| ||||||||||||| |||||    
T  30739138 acttaatcagtcaatttgaaaagttatttcattaaaagaatcacaacgatcat 30739190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 264
Target Start/End: Complemental strand, 36438468 - 36438351
Alignment:
Q  148 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 246  Q
    ||||| |||||||||| |||| || | ||||||  ||| |||||||| |||    ||||||||||||||||||||||||||||||||||| | | |||||    
T  36438468 tctaggctctagttctactttctggacataaatttgatgctatcaaaccactatcaatttgtataatcacttaatcagtcaatttgaaaaaccatttcat 36438369  T
Q  247 tgaaagaatcacaacaat 264  Q
    ||||||||||||||||||    
T  36438368 tgaaagaatcacaacaat 36438351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 1365824 - 1366076
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaata-aaaaa 99  Q
    |||||||| |||||||||| ||||  | ||||||||||||||   || |||||||  |  ||||||||| |||||||||||||||| ||||||| |||||    
T  1365824 cttgagggagtgcaaggtgctcaatcaagccgggcctccaaaatctatgggcctccga--aaaaattaactctaatacccaccccacttaaatataaaaa 1365921  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    |||||||||||           |||||||   |||||||||||||   |||||||| ||||||| || | || | ||||||  | | |||||||| |||     
T  1365922 tatatatgttac----------ttcttta---cacgtttgagtttct-tctagactttagttctcctatctggacataaatttggtactatcaaaccact 1366007  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
     | |||| ||||||| ||||||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  1366008 accaattggtataatgacttaatcagtcaatttgaaaagttatttcatagaaagaatcacaacaatcat 1366076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 40738108 - 40737994
Alignment:
Q  148 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 246  Q
    |||| ||||||||||| ||||||  | ||||||  ||| |||||||| ||||   |||||||||||| ||||||||||||||||| |||||||| || ||    
T  40738108 tctaaactctagttctacttttttgacataaatttgatgctatcaaaccaccatcaatttgtataattacttaatcagtcaatttaaaaagctattttat 40738009  T
Q  247 tgaaagaatcacaac 261  Q
    |||||||||||||||    
T  40738008 tgaaagaatcacaac 40737994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 264
Target Start/End: Original strand, 9479074 - 9479191
Alignment:
Q  148 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 246  Q
    |||| ||||||||||| |||| || | ||||||  ||| |||||||| ||||   |||||||||||| ||||||||||||||||| |||| ||| ||| |    
T  9479074 tctaaactctagttctactttctggacataaatttgatgctatcaaaccaccatcaatttgtataattacttaatcagtcaatttaaaaaactatttcgt 9479173  T
Q  247 tgaaagaatcacaacaat 264  Q
    ||||||||||||||||||    
T  9479174 tgaaagaatcacaacaat 9479191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 18895460 - 18895397
Alignment:
Q  202 taatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    ||||||||||||||| ||||||||||||||| ||||| || |||||||||||||||||||||||    
T  18895460 taatttgtataatcaattaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaat 18895397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 267
Target Start/End: Original strand, 42312012 - 42312076
Alignment:
Q  204 atttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||| || |||||||||||||||||| |||||| |||||||||||||| ||||    
T  42312012 atttgtataatcacttgattagtcaatttgaaaagctatttcattaaaagaatcacaacagtcat 42312076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 267
Target Start/End: Complemental strand, 40841491 - 40841242
Alignment:
Q  21 tcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccac--cccatttaaataaaa---aatatatatgttatatca 115  Q
    ||||||| |||||||||||||||  || ||||||  ||   |||||||| | ||||||||||  |||| | ||||||||   || |||||||||   ||     
T  40841491 tcaactaagccgggcctccaaatactatgggcctaaaa---aaaattaagtttaatacccacaccccactgaaataaaataaaaaatatatgtttcttct 40841395  T
Q  116 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc-cctaatttgtataat 214  Q
    ||||||||||| |||||| ||||||||||   ||||||||||| || ||||||||| | ||||||  |||  ||||||| |||| |||||||||||||||    
T  40841394 ttttctttcttcagtacatgtttgagttt-tttctagactctaattattctttttggacataaatatgatgttatcaaaccacctcctaatttgtataat 40841296  T
Q  215 cacttaatcagtcaatttgaaaagctattc-attgaaagaatcacaacaatcat 267  Q
     ||||||  | |||||||  |||| ||||| ||| ||||||| |||||| ||||    
T  40841295 tacttaactaatcaatttataaagttattctattaaaagaattacaacactcat 40841242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44877059 - 44877006
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcct 54  Q
    |||||||| |||||||||| || |||||||||||||| ||||||||||||||||    
T  44877059 cttgagggagtgcaaggtgctctactaggccgggccttcaaatgttacgggcct 44877006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 25609964 - 25610014
Alignment:
Q  61 aaaaattaaatctaatacccacc-ccatttaaataaaaaatatatatgtta 110  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  25609964 aaaaattaactctaatacccacctccatttaaataaaaaatatgtatgtta 25610014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 267
Target Start/End: Complemental strand, 44876217 - 44876152
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagctatt-cattgaaagaatcacaacaatcat 267  Q
    ||||| || ||||| |||||||||||||||  ||||||||| |||| |||||||||||||||||||    
T  44876217 aatttttaaaatcatttaatcagtcaatttagaaagctatttcattaaaagaatcacaacaatcat 44876152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 267
Target Start/End: Complemental strand, 3799819 - 3799757
Alignment:
Q  206 ttgtataatcacttaatcagtcaatttgaaaagctatt-cattgaaagaatcacaacaatcat 267  Q
    ||||||||||| ||||| || ||||||   |||||||| ||||||||||||||||||||||||    
T  3799819 ttgtataatcatttaataagccaattttggaagctatttcattgaaagaatcacaacaatcat 3799757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 7366689 - 7366751
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||| ||||| |||||||  ||||||||||||| ||| || ||||||||||||||||||||    
T  7366689 aatttgaataattacttaatttgtcaatttgaaaaactattttattgaaagaatcacaacaat 7366751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 2 - 267
Target Start/End: Complemental strand, 19367683 - 19367416
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaaa 99  Q
    |||||||||||||||||| ||||| ||| |||||||||||||| |||||| |||||||||||| |||||||||||||| |  ||||||||||||||||||    
T  19367683 ttgagggtgtgcaaggtgctcaaccaggtcgggcctccaaatgctacgggtctctaacgaaaa-ttaaatctaatacctatcccccatttaaataaaaaa 19367585  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    ||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||| |||||||| ||||    
T  19367584 tatatatgttatatccttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggattctatcaaaccacc 19367485  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19367484 cctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcat 19367416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 18676577 - 18676308
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    |||||| |||||||||||| ||||| ||||||||| |||||||| ||||||  ||||||||||||||||||||||||||||||||  | |||||||||||    
T  18676577 cttgagagtgtgcaaggtgctcaaccaggccgggcatccaaatgctacgggtttctaacgaaaaattaaatctaatacccacccctcacttaaataaaaa 18676478  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||||||||||||  ||    
T  18676477 atatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaactac 18676378  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  18676377 ccctaatttgtataataacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcat 18676308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 26152012 - 26151744
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaa 99  Q
    |||||||||||||||| || ||||| ||| |||||||||||||| |||||| |||||||||||||| |||||||||||||||||| ||||||||||||||    
T  26152012 cttgagggtgtgcaagatgctcaaccaggtcgggcctccaaatgctacgggtctctaacgaaaaat-aaatctaatacccacccccatttaaataaaaaa 26151914  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagact-ctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||   |||||||| |||||||| ||||||||| |||||||||||||||||||| |||    
T  26151913 tatatatgttatatccttttctttctttagtatacgtttgagtttttttctagacttctagttctcctttttgtacataaatcggatcctatcaaaccac 26151814  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  26151813 ccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcat 26151744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 25222121 - 25222390
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--ttaaataaaaa 98  Q
    ||||||||| || |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| | |  |||||||||||    
T  25222121 cttgagggtatgaaaggtgctcaaccaggccgggcctccaaatgctacgggcctctaacgaaaaattaaatctaataccgaccgcctacttaaataaaaa 25222220  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   |||||||| ||||||| ||||||||| |||||||||||||||||||||||     
T  25222221 atatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactttagttctcctttttgtacataaatcggatcctatcaaatcat 25222320  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
     ||||||||||||||||||||||| |||||||||  |||| || ||||||||||||||||||||||||||    
T  25222321 tcctaatttgtataatcacttaattagtcaatttagaaagttatttcattgaaagaatcacaacaatcat 25222390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 13020220 - 13020487
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaa 99  Q
    ||||||||||||||||||| ||||| ||| ||||||||||| || |||||||||||||||||||||||||| ||||||||||||| | ||||||||||||    
T  13020220 cttgagggtgtgcaaggtgctcaaccagggcgggcctccaattgctacgggcctctaacgaaaaattaaatttaatacccacccccacttaaataaaaaa 13020319  T
Q  100 -tatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcctatcaaatca 197  Q
     ||||||||||||||| |||||||||||||||||||||||||||||   | |||||||||||||||  |||||||| |||||||||||||||||||| ||    
T  13020320 atatatatgttatatccttttctttctttagtacacgtttgagttttttttctagactctagttctcttttttgtacataaatcggatcctatcaaacca 13020419  T
Q  198 cccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||    
T  13020420 cccctaatttgtataatcacttaatcagtcaatttggaaagctatttcatttaaagaatcacaacaat 13020487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 2 - 267
Target Start/End: Complemental strand, 42411822 - 42411555
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaaa 99  Q
    |||||||||||||||||| ||||  ||||||||||||||| || || | |||||||||||||||||||||||||||||||  ||||| ||||| |||| |    
T  42411822 ttgagggtgtgcaaggtgctcaatcaggccgggcctccaattgctaagagcctctaacgaaaaattaaatctaatacccaacccccacttaaaaaaaata 42411723  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    ||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  42411722 tatatatgttatatccttttctttctttagtacacgtttgagttttt-tctagactctagttctcctttttgtacataaatcggatcctatcaaaccacc 42411624  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||||||| |||||||||| ||||||| |||||| |||||||||||||||||||    
T  42411623 cctaatttgtataatcacttaattagtcaatttggaaagctatttcatttaaagaatcacaacaatcat 42411555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 45618775 - 45619043
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    ||||||||||||||||||| ||| | |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  45618775 cttgagggtgtgcaaggtgctcagccaggccgggcctccaaatgctacgggcctctaacgaaaaat-aaatctaatacccaccccccatttaaataaaaa 45618873  T
Q  99 a-tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagact-ctagttcttctttttgtatataaatcggatcctatcaaatc 196  Q
    | ||||||||||||||| |||||||||||||||| ||||||||||||   |||||||| |||||||| ||||||||| |||||||||||||||||||| |    
T  45618874 aatatatatgttatatccttttctttctttagtatacgtttgagttttt-tctagacttctagttctcctttttgtacataaatcggatcctatcaaacc 45618972  T
Q  197 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  45618973 acccctaatttgtataatcacttaatcagtcaatttg-gaagctatttcattgaaagaatcacaacaatcat 45619043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 6530458 - 6530726
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaa 99  Q
    |||||||||||| |||||| ||||| || |||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||| | ||||||||||||    
T  6530458 cttgagggtgtgtaaggtgctcaacgagaccggacctctaaatgatacgggcctctaacgaaaaattaaatctaatatccacccccacttaaataaaaaa 6530557  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    |||||| |||||||| |||||||||||||||| | |||| |||||   ||||||||||||||||  |||||||| ||||||||||| |||||||| ||||    
T  6530558 tatatacgttatatccttttctttctttagtagatgtttaagtttttttctagactctagttctcatttttgtacataaatcggatactatcaaaccacc 6530657  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  6530658 cctaatttgtataatcacttaatcagtcaatttgaaaaggtatttcattgaaagaatcacaacaatcat 6530726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 2 - 265
Target Start/End: Original strand, 7993433 - 7993697
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaa 99  Q
    |||||||||||||||||| ||||   | ||||||||||||||| ||| | |||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  7993433 ttgagggtgtgcaaggtgctcaatctgaccgggcctccaaatgctacag-cctctaacgaaaaattaaatttaatacccaccccctatttaaataaaaaa 7993531  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||   |||||||||||||||| ||||||||| ||||| |||||||||||||| ||||    
T  7993532 tatatatgttatatccttttctttctttagtacacatttgagttttt-tctagactctagttctcctttttgtacataaaccggatcctatcaaaccacc 7993630  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 265  Q
    |||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  7993631 cctaatttgtataatcacttaatcagccaatttggaaagctatttcattgaaagaatcacaacaatc 7993697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 41096805 - 41096535
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    ||||| ||||||||||||  ||||  ||||||| |||| ||||| |||||| ||||||||||||||||||| |||||||||||||  | |||||||||||    
T  41096805 cttgaaggtgtgcaaggtactcaatcaggccggacctctaaatgctacgggtctctaacgaaaaattaaatttaatacccaccccccacttaaataaaaa 41096706  T
Q  99 -atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatca 197  Q
     |||||||||||||||| ||||||||||||||||||| |||||||||   |||||||||||||||| ||||||||| ||||||| |||||||||||||||    
T  41096705 tatatatatgttatatccttttctttctttagtacacatttgagtttttttctagactctagttctcctttttgtacataaatcagatcctatcaaatca 41096606  T
Q  198 cccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  41096605 cccctaatttgtataatcacttaatcagtcaatttggaaaactatttcattgaaagaatcacaacaatcat 41096535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 42760013 - 42759753
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaataaaaaa- 99  Q
    ||||||||||| ||||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| ||||||||||||     
T  42760013 cttgagggtgtacaaggtgctcaactaggtcgggcctccaaatgctacaggcctctaacgaaaaattaaatctaatatccaccccacttaaataaaaaaa 42759914  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||   | |||||||||||||| ||||||||| |||||||||||| ||||||| ||||    
T  42759913 tatatatgttatatcattttctttctttagtacacgtttgagtttttttttagactctagttctcctttttgtacataaatcggatcatatcaaaccacc 42759814  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    | |||||| ||        ||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  42759813 cataattttta--------taatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcat 42759753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 4855788 - 4856060
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatttaaat-aaaa 97  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||  |||||||||||||||||||| |||||||||||||||||  |||||||||| ||||    
T  4855788 cttgagggtgtgcaaggtgctcaaccaggccggacctccaaattctacgggcctctaacgaaaaa-taaatctaatacccaccctccatttaaataaaaa 4855886  T
Q  98 aatatatatgttatatcattttctttctttagtacacgtttgag-tttaaatctaga-ctctagttcttctttttgt-atataaatcggatcctatcaaa 194  Q
    |||||||||||||||||  ||||||||||| ||||||||||||| |||   ||||||  | ||||||| |||||||| | ||||||| ||||||||||||    
T  4855887 aatatatatgttatatccctttctttctttcgtacacgtttgagttttttttctagatttttagttctcctttttgtaacataaatcagatcctatcaaa 4855986  T
Q  195 tcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
     ||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||    
T  4855987 ccacccctaatttgtataatcacttaatcagtgaatttggaaagctatttcattgaaagaatcacaacaatcat 4856060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 36481204 - 36481425
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaa 98  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  36481204 cttgagggtgtgcaaggtgctcaaccaggccggacctccaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccccacttaaataaaaa 36481303  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||   | ||||||||| |||| ||||||||| |||||| ||||||| ||||| |||    
T  36481304 atatatatgttatatcattttctttc-ttagtacacatttgagttt-cttttagactctaattctcctttttgtacataaattggatcctttcaaaccac 36481401  T
Q  199 ccctaatttgtataatcacttaat 222  Q
    ||||||||||||||||||||||||    
T  36481402 ccctaatttgtataatcacttaat 36481425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 2 - 267
Target Start/End: Original strand, 45042187 - 45042459
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaa 99  Q
    ||||||| | |||||||| ||||  ||| ||||||||||||||||| ||||||| ||| ||||||||| |||||||||||| ||  ||||||||||||||    
T  45042187 ttgagggagcgcaaggtgctcaatcaggtcgggcctccaaatgttatgggcctcaaacaaaaaattaagtctaatacccactccttatttaaataaaaaa 45042286  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
     |||||||| ||||||||||||||||| |||| ||||||||||||   | ||||||||||||||||||||| ||| ||||||  |||||||||||| |||    
T  45042287 aatatatgtcatatcattttctttcttcagtatacgtttgagttttttttctagactctagttcttcttttcgtacataaatttgatcctatcaaaccac 45042386  T
Q  199 ccctaatttgtataatcacttaatcagtcaatt---tgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||||||||||||||||   |||||  ||| ||||||||||||||||||||||||||    
T  45042387 ccctaatttgtataatcacttaatcagtcaatttggtgaaagtctatttcattgaaagaatcacaacaatcat 45042459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 2063616 - 2063872
Alignment:
Q  10 gtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaataaaaaatatatatgtt 109  Q
    |||||||||| ||||| || ||||||||||||||  |||||||||| ||| ||||||||| |||||||||||||||| ||||||||| || | | || ||    
T  2063616 gtgcaaggtgttcaaccagaccgggcctccaaatactacgggcctcaaacaaaaaattaagtctaatacccaccccacttaaataaataaaaaa-atatt 2063714  T
Q  110 atatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgt 209  Q
    ||||| |||||||||||  ||| ||||||||||||   | |||||||||||| | ||||||||| ||||||   ||||||||||| ||||||||||||||    
T  2063715 atatccttttctttcttcggtatacgtttgagttttttt-tagactctagttttcctttttgtacataaatataatcctatcaaaccacccctaatttgt 2063813  T
Q  210 ataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  2063814 ataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcat 2063872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 55 - 267
Target Start/End: Original strand, 12269279 - 12269491
Alignment:
Q  55 ctaacgaaaaattaaatctaatacccaccccat-ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctaga 153  Q
    ||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||   | ||||    
T  12269279 ctaacgaaaaattaaatctaatatccaccccagcttaaataaaaaatatatatgttatatcattttttttctttagtacacatttgaattttttt-taga 12269377  T
Q  154 ctctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaag 252  Q
    ||||||||||  |||||| | ||||||| |||||||||||| |||||||||||||||||||||||||||||||  ||||| ||||||| |||||| |||     
T  12269378 ctctagttctcttttttgcacataaatcagatcctatcaaaccacccctaatttgtataatcacttaatcagt-gatttggaaagctatttcattaaaaa 12269476  T
Q  253 aatcacaacaatcat 267  Q
    |||||| ||||||||    
T  12269477 aatcaccacaatcat 12269491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 105 - 267
Target Start/End: Complemental strand, 34062015 - 34061853
Alignment:
Q  105 atgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaa 204  Q
    |||||||||| ||||||||||| ||||||||| |||||||   | |||||| ||||||||||||||||| ||||||| | |||||||||| ||||| |||    
T  34062015 atgttatatctttttctttcttcagtacacgtatgagttttttt-tagactatagttcttctttttgtacataaatctggtcctatcaaaccacccataa 34061917  T
Q  205 tttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||| || |||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  34061916 tttgtatgattacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcat 34061853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 187 - 267
Target Start/End: Complemental strand, 18173018 - 18172937
Alignment:
Q  187 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  18173018 ctatcaaaccacccctaatttgtataatcacttaatcactcaatttgaaaagctatttcatcgaaagaatcacaacaatcat 18172937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 116 - 264
Target Start/End: Original strand, 39081314 - 39081462
Alignment:
Q  116 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 215  Q
    |||| |||||| ||||||||| |||||||   |||||||||||||| | |||| || | ||||||  ||| |||||||| ||||   |||||||||||||    
T  39081314 ttttttttcttcagtacacgtatgagttttt-tctagactctagttttactttctggacataaatttgatgctatcaaaccaccatcaatttgtataatc 39081412  T
Q  216 acttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  39081413 acttaatcagtcaatttgaaaagctatttcattgaaagaattacaacaat 39081462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 15457316 - 15457564
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaa 99  Q
    |||||| | |||||||||| ||||  | |||||||||||||| |||| |||||||    |||||||||| ||||||||||||||| | ||||||||||||    
T  15457316 cttgagagagtgcaaggtgctcaatcaagccgggcctccaaaagttatgggcctca---gaaaaattaactctaatacccacccccacttaaataaaaaa 15457412  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    |||||||||||           |||||||   |||||||||||||   |||||||| ||||||   | |  | | ||||||| | | ||||||||  |||    
T  15457413 tatatatgttac----------ttcttta---cacgtttgagttttt-tctagactttagttcacttatccggacataaatctggtactatcaaactacc 15457498  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    || ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  15457499 cccaatttgtataatcacttaatcagtcaatttgaaaagctattttattgaaagaatcacaacaat 15457564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 264
Target Start/End: Complemental strand, 21747347 - 21747230
Alignment:
Q  148 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctat-tcat 246  Q
    |||||||| |||||||||| | || | ||||||| | | |||||||| |||||| |||||||||||||||||||||||||||||| |||  |||| ||||    
T  21747347 tctagactttagttcttctatctgaacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaatttaaaatactatgtcat 21747248  T
Q  247 tgaaagaatcacaacaat 264  Q
    ||||||||||||||||||    
T  21747247 tgaaagaatcacaacaat 21747230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 148 - 267
Target Start/End: Complemental strand, 27302645 - 27302525
Alignment:
Q  148 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctat-tcat 246  Q
    ||||||||||| ||||||| | || | | ||||  ||| ||| ||||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||    
T  27302645 tctagactctaattcttctgtctggacaaaaattcgatgctaccaaatcaccctcaatttgtataatcacttaatcggtcaatttgaaaagctatatcat 27302546  T
Q  247 tgaaagaatcacaacaatcat 267  Q
    | |||||||||||||||||||    
T  27302545 taaaagaatcacaacaatcat 27302525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 264
Target Start/End: Original strand, 1418832 - 1418973
Alignment:
Q  122 ttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaa 221  Q
    ||||| ||||||||| |||||||   |||||||||||||||| ||||||  | |||| | | || |||||||| ||||   |||||||||||||||||||    
T  1418832 ttcttcagtacacgtatgagttttt-tctagactctagttctactttttagacataatttg-atgctatcaaaccaccatcaatttgtataatcacttaa 1418929  T
Q  222 tcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||||||||| ||||||| |||||||||||||||||||||||    
T  1418930 tcagtcaatttgtaaagctatttcattgaaagaatcacaacaat 1418973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 267
Target Start/End: Complemental strand, 36060087 - 36059902
Alignment:
Q  82 ccccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatc 181  Q
    ||||| |||||| |||||  || ||||||  || |||||||||||| |||| ||| | |||||   |||||||||||||||| ||||||  | | ||||     
T  36060087 ccccacttaaattaaaaaattacatgttacttctttttctttctttggtacgcgtataagttttt-tctagactctagttctactttttagacaaaaatt 36059989  T
Q  182 ggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
     ||| |||||||| ||||   |||||||||||||||||||||||| ||||| |||||||| ||||||||||||| ||||||||||||    
T  36059988 tgatgctatcaaaccaccatcaatttgtataatcacttaatcagttaatttaaaaagctatttcattgaaagaaccacaacaatcat 36059902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 187 - 267
Target Start/End: Complemental strand, 38985787 - 38985706
Alignment:
Q  187 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||| |||| | |||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  38985787 ctatcaaaccacctccaatttgtataatcatttaatcaatcaatttgaaaagctatttcattgaaagaatcacaacaatcat 38985706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 267
Target Start/End: Complemental strand, 18916245 - 18916051
Alignment:
Q  61 aaaaattaaatctaatacccacccc-atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctag 159  Q
    ||||||||| ||||||||||||||| | |||||||||||||||||||||||             ||||  |||||||||||| ||   |||||||| |||    
T  18916245 aaaaattaactctaatacccacccccacttaaataaaaaatatatatgtta-------------cttttttacacgtttgaggtt-tttctagactttag 18916160  T
Q  160 ttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcac 258  Q
    ||||||  | || | ||||||| | | |||||||| || ||| |||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||    
T  18916159 ttcttcaatctggacataaatctggtactatcaaaccatccccaatttgtataatcacttaatcaatcaatttgaaaagctatttcactgaaagaatcac 18916060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 267
Target Start/End: Complemental strand, 31273357 - 31273163
Alignment:
Q  73 taatacccacccc-atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttg 171  Q
    ||||||||||||| | | ||||||||||||||||||||| |||||||||||||||||||| || |||||||||   | || |||| || ||| |||| ||    
T  31273357 taatacccacccccactcaaataaaaaatatatatgttacatcattttctttctttagtatacatttgagttt-tttgtatactccagctctcctttctg 31273259  T
Q  172 tatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
     |  |||||  |||  ||||||| |||||| |||||||||||||| |||||||||||||||| ||  ||| |||||| ||||||||| |||| ||||    
T  31273258 gacttaaatttgatgttatcaaaccacccc-aatttgtataatcatttaatcagtcaatttggaatactatttcattaaaagaatcataacattcat 31273163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 13997316 - 13997378
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||| ||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  13997316 aatttgaataatcacttaatgagtcaatttgaaaaactatttcattgaaagaatcacaacaat 13997378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 38599404 - 38599466
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||    
T  38599404 aatttgtataatcacttaatcaatcaatttgaaaaactatttcattgaaagaatcaaaacaat 38599466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 17117691 - 17117642
Alignment:
Q  219 taatcagtcaatttgaaaagctatt-cattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17117691 taatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcat 17117642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 267
Target Start/End: Complemental strand, 1226465 - 1226263
Alignment:
Q  63 aaattaaatctaatacc-caccccatttaaataaaaaa--tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctag 159  Q
    ||||||| ||||||||| ||||||| ||||||||||||  |||||||||||  || |||||||      ||||||||||||||||   |||||||||||     
T  1226465 aaattaagtctaataccacaccccacttaaataaaaaaaatatatatgttacttctttttcttcg----gtacacgtttgagttttt-tctagactctaa 1226371  T
Q  160 ttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt--cattgaaagaatca 257  Q
    |||| ||||  | | ||||||| ||| ||| |||| |||||  ||||| |||||||||| |||||| |||||||||||| ||||   ||  |||||||||    
T  1226370 ttctccttt--ggacataaatctgatgctaccaaaccaccctcaatttatataatcactcaatcagacaatttgaaaagttatttcaataaaaagaatca 1226273  T
Q  258 caacaatcat 267  Q
    ||||||||||    
T  1226272 caacaatcat 1226263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 17117828 - 17117778
Alignment:
Q  61 aaaaattaaatctaatacccacccc-atttaaataaaaaatatatatgtta 110  Q
    |||||||||||||||||| |||||| | |||||||||||||||||||||||    
T  17117828 aaaaattaaatctaatactcacccccacttaaataaaaaatatatatgtta 17117778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 18173130 - 18173080
Alignment:
Q  61 aaaaattaaatctaatacccacccc-atttaaataaaaaatatatatgtta 110  Q
    ||||||||| ||||||||||||||| | |||||||||||||||||||||||    
T  18173130 aaaaattaactctaatacccacccccacttaaataaaaaatatatatgtta 18173080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 29480699 - 29480637
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagctatt-cattgaaagaatcacaacaat 264  Q
    |||||| |||| |||||| ||||||||||||||||  |||| |||||||||||||||||||||    
T  29480699 aatttgaataaacacttattcagtcaatttgaaaaattatttcattgaaagaatcacaacaat 29480637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 38985899 - 38985849
Alignment:
Q  61 aaaaattaaatctaataccc-accccatttaaataaaaaatatatatgtta 110  Q
    ||||||||| |||||||||| |||||| |||||||||||||||||||||||    
T  38985899 aaaaattaactctaataccccaccccacttaaataaaaaatatatatgtta 38985849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 264
Target Start/End: Complemental strand, 18482575 - 18482506
Alignment:
Q  197 acccctaatttgtataatcacttaatcagtcaatttga-aaagcta-ttcattgaaagaatcacaacaat 264  Q
    ||||| ||||||||||||| |||||||||||||||| | | || || |||||||||||||| ||||||||    
T  18482575 acccccaatttgtataatcgcttaatcagtcaatttaacacagttatttcattgaaagaataacaacaat 18482506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 179; Significance: 1e-96; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 2 - 264
Target Start/End: Original strand, 2618155 - 2618419
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaa 99  Q
    ||||| |||||||||||| ||||| ||| |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||  | ||||||||||||    
T  2618155 ttgagagtgtgcaaggtgctcaaccaggtcgggtctccaaatgttacgggcctctattgaaaaattaaatctaatacccaccccccacttaaataaaaaa 2618254  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||  |||||||| |||||||||||||||||||| ||||    
T  2618255 tatatatgttatatcattttctttctttagtacacgtttgagttttt-tctagactttagttctcttttttgtacataaatcggatcctatcaaaccacc 2618353  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2618354 cctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaat 2618419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 6360560 - 6360826
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    ||||||||||||||||||| ||||  ||||| |||||||||||| ||||||||||||||||||| |||||||||||| |||||||  | |||||||||||    
T  6360560 cttgagggtgtgcaaggtgctcaatcaggccaggcctccaaatgctacgggcctctaacgaaaa-ttaaatctaatatccaccccccacttaaataaaaa 6360658  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||  |||||| | |||||||||||||||||||| |||    
T  6360659 atatatatgttatatcattttctttctttagtacacgtttgagttttt-tctagactctagttctcttttttgcacataaatcggatcctatcaaaccac 6360757  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagctattcattgaaagaatcacaacaatcat 267  Q
    || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6360758 ccttaatttgtataatcacttaatcagtcaatttgaaaagttattcattgaaagaatcacaacaatcat 6360826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 3515117 - 3514847
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    ||||||||||||||||||| ||||| | ||||||||| |||||| |||||||||||||||||||||||||| |||||| ||||||  | |||||||||||    
T  3515117 cttgagggtgtgcaaggtgctcaaccaagccgggcctacaaatgctacgggcctctaacgaaaaattaaatttaatactcaccccccacttaaataaaaa 3515018  T
Q  99 a-tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatca 197  Q
    | |||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||||||| ||||||||| ||||||| |||||||||||| ||    
T  3515017 aatatatatgttatatcattttctttctttagtacacgtttgagtttttttctaaactctagttctcctttttgtacataaatcagatcctatcaaacca 3514918  T
Q  198 cccctaatttgtataatcacttaatcagtcaatttgaaaagctat-tcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||| |||||| |||||||| |||||||| |||||||||||||||||||||||||    
T  3514917 cccctaatttgtataatcacgtaatcattcaatttggaaagctatatcattgaaagaatcacaacaatcat 3514847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 6754005 - 6754273
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccac--cccatttaaataaaaa 98  Q
    ||||||| ||||||||||| ||||  ||| ||| |||||||||| |||||||||||| ||||||||||| |||||||| |||  |||| |||||||||||    
T  6754005 cttgaggatgtgcaaggtgttcaatcaggtcggacctccaaatgctacgggcctctatcgaaaaattaattctaatactcactccccacttaaataaaaa 6754104  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    |||||||||||||||||||||||||||||||||| |||||||||||   |||||| |||||||||  |||||||| |||||||||||||||||||| ||     
T  6754105 atatatatgttatatcattttctttctttagtacgcgtttgagttttt-tctagattctagttctcttttttgtacataaatcggatcctatcaaaccat 6754203  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  6754204 ccctaatttgtatagtcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcat 6754273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 29400939 - 29401207
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc-ccatttaaataaaaaa 99  Q
    ||||||||||||||||||| ||||  ||  ||||  |||||||| |||||||||||||| ||||||||||| ||||||||||| ||| ||||||||||||    
T  29400939 cttgagggtgtgcaaggtgctcaatcagatcgggtttccaaatgctacgggcctctaacaaaaaattaaatataatacccacctccacttaaataaaaaa 29401038  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    ||||||||| |||||||||||||||||||||||||||||||||||   ||| |||||||||| |  |||||||| |||||||| |||||||||||  |||    
T  29401039 tatatatgtcatatcattttctttctttagtacacgtttgagtttttttcttgactctagttttcatttttgtacataaatcgaatcctatcaaactacc 29401138  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  29401139 cctaattagtataatcacttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatcat 29401207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 7525433 - 7525163
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    |||||||||||  ||| || ||||| || | ||||||||||||| |||||| |||||||||||||||||||||||||| ||||||  | |||||||||||    
T  7525433 cttgagggtgtataagatgctcaaccagacggggcctccaaatgctacgggtctctaacgaaaaattaaatctaatactcaccccccacttaaataaaaa 7525334  T
Q  99 atatatatgttatatcattttcttt-ctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatca 197  Q
    || ||||| ||||||| |||| ||| |||||||||||||||||||||   |||||||||||||||| | ||||||| |||||||||||||||||||| ||    
T  7525333 atttatatattatatcctttttttttctttagtacacgtttgagtttttttctagactctagttctccattttgtacataaatcggatcctatcaaacca 7525234  T
Q  198 cccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||| |||||||||||||||||||||||||||||||| |||| || || |||||||||||||||||||||||    
T  7525233 cccataatttgtataatcacttaatcagtcaatttggaaagttattttattgaaagaatcacaacaatcat 7525163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 57498 - 57755
Alignment:
Q  13 caaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccac--cccatttaaataaaaaatatatatgtta 110  Q
    ||||||| ||||| ||| ||| |||||||||| |||||||||| ||| ||||||||| ||||||||||||  |||| |||||||||| ||||||||||||    
T  57498 caaggtgctcaaccaggtcggacctccaaatgctacgggcctcaaacaaaaaattaagtctaatacccactccccacttaaataaaagatatatatgtta 57597  T
Q  111 tatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgta 210  Q
    ||||||||||||||||  ||||||||||||||||   | || ||||||||||| ||||||||| ||||||| |||||||||||| ||||| |||||||||    
T  57598 tatcattttctttcttcggtacacgtttgagtttttttttaaactctagttctcctttttgtacataaatctgatcctatcaaaccacccataatttgta 57697  T
Q  211 taatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||||||  ||||||| |||||| |||||||||||||||||||    
T  57698 taatcacttaatcagtcaatttagaaagctatttcattcaaagaatcacaacaatcat 57755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 94 - 267
Target Start/End: Complemental strand, 12614885 - 12614713
Alignment:
Q  94 aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaa 193  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||   | |||||||||||||| ||||||||| |||||||||||||||||||    
T  12614885 aaaaaatatatatgttatatccttttcttt-tttagtacacgtttgagttttttt-tagactctagttctcctttttgtacataaatcggatcctatcaa 12614788  T
Q  194 atcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12614787 accacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcat 12614713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 24455018 - 24455220
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaa 98  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||| ||||| ||||||| ||||||||||||||||||||||  ||||| |||||||||||    
T  24455018 cttgagggtgtgcaaggtgctcaaccaggtcgggcctccaaatgctacggacctctaatgaaaaattaaatctaatacccaccccccacttaaataaaaa 24455117  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    |||||||||||||||| |||   | ||||||||||||||||| |||   |||||||||||||||| |||||| ||||||||||||||||||||||| |||    
T  24455118 atatatatgttatatc-tttatatcctttagtacacgtttgaatttttttctagactctagttctcctttttatatataaatcggatcctatcaaaccac 24455216  T
Q  199 ccct 202  Q
    ||||    
T  24455217 ccct 24455220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 31258724 - 31258543
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc---atttaaataaaa 97  Q
    ||||||||||||||||||| ||||| ||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||   |  |||||||||    
T  31258724 cttgagggtgtgcaaggtgctcaaccaggccggacctacaaatgctacgggcctctaacgaaaaattaaatctaatacccacccccccacataaataaaa 31258625  T
Q  98 aatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaat 180  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||| || | ||||||||| ||||||    
T  31258624 aatatatatgttatatccttttctttctttagtacacgtttgagttt-tttctagactctaattatcctttttgtacataaat 31258543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 117 - 267
Target Start/End: Original strand, 29149316 - 29149470
Alignment:
Q  117 tttctttctttagtacacgtttgagtt---taaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataa 213  Q
    |||||||||||||||||||||||||||   |   |||||||||||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||    
T  29149316 tttctttctttagtacacgtttgagttgtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacacctaatttgtataa 29149415  T
Q  214 tcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  29149416 tcacttaatcagtcaatttggaaagttagttcattgaaagaatcacaacaatcat 29149470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 107 - 267
Target Start/End: Complemental strand, 628254 - 628092
Alignment:
Q  107 gttatatcattttctttctttagtacacgtttgagttt-aaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaat 205  Q
    |||||||| | |||||||||||||||| |||||| |||    |||||||||||||||  ||||||||| | ||||| |||| ||||||| ||||||||||    
T  628254 gttatatcctcttctttctttagtacatgtttgattttcttttctagactctagttcacctttttgtacacaaatcagatcttatcaaaccacccctaat 628155  T
Q  206 ttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  628154 ttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcat 628092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 12622226 - 12622144
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc 83  Q
    ||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||||||| ||||||||||||||||| |||||    
T  12622226 cttgagggtgtgcaaggtgctcaaccaggccgggcctccaaatgctacggacctctaacaaaaaattaaatctaatatccacc 12622144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 267
Target Start/End: Complemental strand, 30915539 - 30915363
Alignment:
Q  94 aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat--ctagactctagttcttctttttgtatataaatcggatcctatc 191  Q
    |||||| ||| |||||| ||  |||||||||||| |||| ||| |||||||   |  ||||||||||||||| |||| || | ||||||  ||| |||||    
T  30915539 aaaaaaaatacatgttacatatttttctttctttggtactcgtatgagtttttttttctagactctagttctactttctggacataaatttgatgctatc 30915440  T
Q  192 aaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||| | ||   |||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  30915439 aaacccccatcaatttgtataattacttaatcagtcaatttgaaaagctatttaattgaaagaatcacaacaatcat 30915363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 3748683 - 3748568
Alignment:
Q  150 tagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattg 248  Q
    |||| ||||||||| ||||||| | ||||||  ||| |||||||| | ||   |||||||||||||||||||||| |||||||||||||||| |||||||    
T  3748683 tagattctagttctactttttggacataaatttgatgctatcaaaccgccatcaatttgtataatcacttaatcaatcaatttgaaaagctatttcattg 3748584  T
Q  249 aaagaatcacaacaat 264  Q
    ||||||||||||||||    
T  3748583 aaagaatcacaacaat 3748568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 188 - 266
Target Start/End: Original strand, 31860989 - 31861067
Alignment:
Q  188 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatca 266  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31860989 tatcaaaccacccc-aatttgtataattacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 31861067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 267
Target Start/End: Complemental strand, 1690741 - 1690630
Alignment:
Q  157 tagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaat 255  Q
    ||||||| || |||| | ||||||| | | |||||||| |||| | ||||||||||||||||| |||| ||||||||||||  || ||||||||||||||    
T  1690741 tagttctcctatttggacataaatctggtactatcaaaccaccaccaatttgtataatcacttgatcaatcaatttgaaaatttatttcattgaaagaat 1690642  T
Q  256 cacaacaatcat 267  Q
    ||||||||||||    
T  1690641 cacaacaatcat 1690630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 14893509 - 14893414
Alignment:
Q  173 atataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||| ||| ||||||||  || |  |||||||||||| |||||||||||||||||||||| ||| ||| || |||||||||||||||||||    
T  14893509 atataaatctgatgctatcaaacaactctgaatttgtataattacttaatcagtcaatttgaaaaactatttcgttaaaagaatcacaacaatcat 14893414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 21946109 - 21946171
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||    
T  21946109 aatttgtataatcacttaatcagtctatttgaaaagctatttcattgaaagaaccataacaat 21946171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 267
Target Start/End: Original strand, 19231529 - 19231679
Alignment:
Q  116 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 215  Q
    |||| |||||| || ||||||||||||||   |||||| | ||||||| |||| || | ||||||| | | ||||||||  |||   |||||||||| ||    
T  19231529 ttttttttcttcaggacacgtttgagttttt-tctagagtttagttctactttctggacataaatctggtgctatcaaactaccttcaatttgtata-tc 19231626  T
Q  216 acttaatcagtcaatttgaaaagctat-tcattgaaagaatcacaacaatcat 267  Q
    ||||||||| |||||||||||||||||  |||||||| |||||||||||||||    
T  19231627 acttaatcaatcaatttgaaaagctatgacattgaaaaaatcacaacaatcat 19231679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 22503725 - 22503810
Alignment:
Q  180 tcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||| ||| | |||||   |||||||||||||||||||||||||||| ||| ||| |||||||||| | |||||||||    
T  22503725 tcggatcctatcaaaccactcataatt---ataatcacttaatcagtcaatttgaaaaactatttcgttgaaagaattaaaacaatcat 22503810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 267
Target Start/End: Complemental strand, 29308529 - 29308464
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||| ||||||| |||||||||||||||||||||| ||| |||||||||  |||||||||||||||    
T  29308529 aattggtataatgacttaatcagtcaatttgaaaaactatttcattgaagtaatcacaacaatcat 29308464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 267
Target Start/End: Complemental strand, 1093102 - 1093038
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagctattcattgaaagaatcacaacaatcat 267  Q
    |||| ||||||| ||| ||||||||||||| ||||||||||   |||||||||||||||||||||    
T  1093102 aattggtataatgactaaatcagtcaatttaaaaagctatttcatgaaagaatcacaacaatcat 1093038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 31234913 - 31234953
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagctatt 243  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  31234913 aatttgtataatcacttaatcaatcaatttgaaaagctatt 31234953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1093289 - 1093181
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaa 99  Q
    |||||||| |||||||||| |||| || | ||||||| ||||  ||| |||||||  |  ||||||||| ||||||||||||||| | |||||||||||     
T  1093289 cttgagggagtgcaaggtgctcaattaagtcgggccttcaaaatttatgggcctccga--aaaaattaactctaatacccacccccacttaaataaaaac 1093192  T
Q  100 tatatatgtta 110  Q
    |||||||||||    
T  1093191 tatatatgtta 1093181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 29308658 - 29308611
Alignment:
Q  61 aaaaattaaatctaatacccacccc-atttaaataaaaaatatatatg 107  Q
    ||||||||| ||||||||||||||| | ||||||||||||||||||||    
T  29308658 aaaaattaactctaatacccacccccacttaaataaaaaatatatatg 29308611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 1690824 - 1690774
Alignment:
Q  61 aaaaattaaatctaatacccacc-ccatttaaataaaaaatatatatgtta 110  Q
    ||||||||| ||||||||||||| ||| |||||||||| ||||||||||||    
T  1690824 aaaaattaactctaatacccacctccacttaaataaaatatatatatgtta 1690774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 6294279 - 6294321
Alignment:
Q  226 tcaatttgaaaagctatt-cattgaaagaatcacaacaatcat 267  Q
    |||||||||||||| ||| ||||||||||||||||||||||||    
T  6294279 tcaatttgaaaagcaatttcattgaaagaatcacaacaatcat 6294321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 31860876 - 31860926
Alignment:
Q  61 aaaaattaaatctaatacccacccc-atttaaataaaaaatatatatgtta 110  Q
    ||||||||| ||||||||||||||| |  ||||||||||||||||||||||    
T  31860876 aaaaattaactctaatacccacccccacctaaataaaaaatatatatgtta 31860926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 15035840 - 15035784
Alignment:
Q  205 tttgtataatcacttaatcagtcaatttgaaaagctattcattgaaagaatcacaacaat 264  Q
    |||||||||||| |||| |||||||||||||||||   | ||| ||||||||||||||||    
T  15035840 tttgtataatcatttaaccagtcaatttgaaaagc---tgattcaaagaatcacaacaat 15035784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 243
Target Start/End: Original strand, 32056065 - 32056102
Alignment:
Q  206 ttgtataatcacttaatcagtcaatttgaaaagctatt 243  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  32056065 ttgtataatcacttaatcactcaatttaaaaagctatt 32056102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 31244050 - 31244089
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagctatt 243  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  31244050 aatttgtataatcacttaatcaatcaa-ttgaaaagctatt 31244089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 179; Significance: 1e-96; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 32131055 - 32130787
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    |||||||||||| |||||| ||||| |||| ||||||||||||| |||| || ||| ||||||||||||||||||||||||||||  | |||||||||||    
T  32131055 cttgagggtgtgtaaggtgttcaaccaggctgggcctccaaatgctacgagcttctcacgaaaaattaaatctaatacccaccccccacttaaataaaaa 32130956  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    |||||||||||||||||||||||||||||||||| |||||||||||   ||||||| |||||||||||||||||| |||||||||||||||||||| |||    
T  32130955 atatatatgttatatcattttctttctttagtacccgtttgagttttt-tctagacactagttcttctttttgtacataaatcggatcctatcaaaccac 32130857  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  32130856 ccctaatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaatcat 32130787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 2 - 267
Target Start/End: Complemental strand, 28463853 - 28463585
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaa 99  Q
    |||| ||||||||||||| ||||  ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  28463853 ttgaaggtgtgcaaggtgttcaatcaggccggacctccaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccccacttaaataaaaaa 28463754  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||   |||||||||||||||| ||||||||| |||||||||||| ||||||| ||||    
T  28463753 tatatatgttatatccttttctttctttagtaaacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcttatcaaaccacc 28463654  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||||||||| |||| ||||||||||| |||||||||| |||||||||||||||    
T  28463653 cctaatttgtataatcacttaatcaatcaagttgaaaagctatttcattgaaaaaatcacaacaatcat 28463585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 53011514 - 53011779
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaa 98  Q
    ||||||||||||||||||| ||||| || |||| |||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  53011514 cttgagggtgtgcaaggtgctcaaccagaccgg-cctccaaatgctacgggcctctaacgaaaaattaaatctaatacccatcccccatttaaataaaaa 53011612  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||   |||| |||||| |||| ||||||||| ||||||| |||||||||||| |||    
T  53011613 atatat--gttatatcattttctttctttagtacacgtttgagttttt-tctaaactctaattctcctttttgtacataaatcagatcctatcaaaccac 53011709  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  53011710 ccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattaaaagaatcacaacaatcat 53011779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 2 - 267
Target Start/End: Complemental strand, 11682008 - 11681739
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaaa 99  Q
    |||||||||||||||||| ||||| ||||||||||| |||||| |||| |||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  11682008 ttgagggtgtgcaaggtgctcaaccaggccgggccttcaaatgctacgagcctctaacgaaaaattaaatctaatacccaccccccacttaaataaaaaa 11681909  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttc-tttttgtatataaatcggatcctatcaaatcac 198  Q
    ||||||| ||||||  |||||||||||||||||||||||||||||   |||||||||||||||| | ||||| || |||||||||||||||||||| |||    
T  11681908 tatatatattatattcttttctttctttagtacacgtttgagtttttttctagactctagttctccttttttttacataaatcggatcctatcaaaccac 11681809  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||| ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  11681808 ccctaatttttataatcacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcat 11681739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 2 - 267
Target Start/End: Complemental strand, 11690287 - 11690018
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaaa 99  Q
    |||||||||||||||||| ||||| ||||||||||| |||||| |||| |||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  11690287 ttgagggtgtgcaaggtgctcaaccaggccgggccttcaaatgctacgagcctctaacgaaaaattaaatctaatacccaccccccacttaaataaaaaa 11690188  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttc-tttttgtatataaatcggatcctatcaaatcac 198  Q
    ||||||| ||||||  |||||||||||||||||||||||||||||   |||||||||||||||| | ||||| || |||||||||||||||||||| |||    
T  11690187 tatatatattatattcttttctttctttagtacacgtttgagtttttttctagactctagttctccttttttttacataaatcggatcctatcaaaccac 11690088  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||| ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  11690087 ccctaatttttataatcacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcat 11690018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 19661179 - 19661444
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaa 98  Q
    ||||||||||||||||||| ||||| |||| |||||| |||||| || ||| ||||||||||||||||||| |||||||||  ||||| |||||||||||    
T  19661179 cttgagggtgtgcaaggtgctcaaccaggc-gggccttcaaatgctatgggtctctaacgaaaaattaaatttaatacccatcccccacttaaataaaaa 19661277  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    |||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||  |||||||| |||||||||||||||||||| |||    
T  19661278 atatatatgttatatccttttctttctttagtacacgtttgagttttt-tctagactctagttctcatttttgtacataaatcggatcctatcaaaccac 19661376  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatc 265  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  19661377 ccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaaacacaacaatc 19661444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 41038047 - 41038317
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    |||||||||||||||| || ||||| |||||||||||||||||| ||||| | |||||||||||||||||||||||| |||||||  |||||||||||||    
T  41038047 cttgagggtgtgcaagatgctcaaccaggccgggcctccaaatgatacggtc-tctaacgaaaaattaaatctaatatccaccccccatttaaataaaaa 41038145  T
Q  99 a-tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttcttttt-gtatataaatcggatcctatcaaatc 196  Q
    | ||||||| ||||||| ||||  |||||||||||||||||||||||   |||||||||||||| || ||||| ||| |||||||| |||||||||||||    
T  41038146 aatatatatattatatcttttttattctttagtacacgtttgagtttttttctagactctagttttttttttttgtacataaatcgaatcctatcaaatc 41038245  T
Q  197 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  41038246 acccctaatttgtataatcacttaatcagtcaatttggaaaactatttcattgaaagaatcacaacaatcat 41038317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 11 - 267
Target Start/End: Complemental strand, 23426417 - 23426163
Alignment:
Q  11 tgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaataaaaaatatatatgtta 110  Q
    ||||||||| |||||||||| || |||| ||||  |||||||||||||||||||||||||||||||||||||||| |   | | ||| ||||||||||||    
T  23426417 tgcaaggtgctcaactaggctggacctcgaaatactacgggcctctaacgaaaaattaaatctaatacccaccccct---acttaaatatatatatgtta 23426321  T
Q  111 tatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgta 210  Q
    |||  |||||||||||||||| ||||||||||||   |||||||||||||||| ||||||||| |||||||||||||||||||| |||| ||||||||||    
T  23426320 tatacttttctttctttagtatacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacctctaatttgta 23426221  T
Q  211 taatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  23426220 taatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcat 23426163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 44477837 - 44478106
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    |||||||||||| |||||| ||||| ||| ||||||||||||| |||||| ||||||||||||||| |||||||||| |||||||  |||||||||||||    
T  44477837 cttgagggtgtgtaaggtgttcaaccaggtcgggcctccaaatattacggacctctaacgaaaaat-aaatctaatatccacccctcatttaaataaaaa 44477935  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagac-tctagttcttctttttgtatataaatcggatcctatcaaatca 197  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||   |||| || ||||||| |  |||||||| ||||||| |||||||||||| ||    
T  44477936 atatatatgttatatcattttatttctttagtacacgtttgagtttttttctaaacttctagttatcatttttgtacataaatcagatcctatcaaacca 44478035  T
Q  198 cccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||| ||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  44478036 cccataatttgtataatcactaaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcat 44478106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 21168855 - 21169088
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--ttaaataaaaa 98  Q
    ||||||||| ||||||||| ||||| |||||||  ||||||||| ||||||||||||||||||||||||||||||| |||||||||   |||||||||||    
T  21168855 cttgagggtatgcaaggtgctcaaccaggccggatctccaaatgatacgggcctctaacgaaaaattaaatctaatgcccaccccacacttaaataaaaa 21168954  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    |||||||||||||| | |||||||||||| ||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  21168955 atatatatgttataaccttttctttcttttgtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaatcac 21169054  T
Q  199 ccctaatttgtataatcacttaatcagtcaattt 232  Q
    |||||||||||||||||| ||||| |||||||||    
T  21169055 ccctaatttgtataatcaattaatgagtcaattt 21169088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 27632200 - 27632465
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaa 98  Q
    |||||||| |||||||||| |||||||||||||||||||||||| |||||||||  ||  ||| |||||  ||||||||||  ||||  |||||||||||    
T  27632200 cttgagggagtgcaaggtgctcaactaggccgggcctccaaatgctacgggcctaaaa--aaatattaagactaatacccatccccctgttaaataaaaa 27632297  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    | ||||  ||||||| |||||||||||| |||||||||||||||||   |||||| ||||||||| ||||||||| ||||||  |||||||||||| |||    
T  27632298 aaatat--gttatataattttctttcttcagtacacgtttgagtttttttctagattctagttctcctttttgtacataaatttgatcctatcaaaccac 27632395  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||    
T  27632396 ccctaatttgtataatcacttaattagtcaatttgaaaagctacttcattgaaagaatcacatcaatcat 27632465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 2 - 267
Target Start/End: Original strand, 23256394 - 23256661
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaa- 99  Q
    |||||||||||||||||| ||||  ||||||  ||||||||||||| ||| || |||||||||||||||| ||||| ||||||| | ||||| ||||||     
T  23256394 ttgagggtgtgcaaggtgctcaatcaggccgaacctccaaatgttatgggtctttaacgaaaaattaaatataatatccacccccacttaaacaaaaaaa 23256493  T
Q  100 -tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
     ||||||||||||||| ||||||||||| ||||||| |||||||||   | ||||||| |||||| ||||||||| |||||||||||||||||||| |||    
T  23256494 atatatatgttatatccttttctttctt-agtacacatttgagttttttt-tagactccagttctcctttttgtacataaatcggatcctatcaaaccac 23256591  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||| ||||||||||||||||||  ||||||| |||| |||||||||||||||||||||    
T  23256592 ccctaatttgtataaccacttaatcagtcaatttagaaagctatttcaatgaaagaatcacaacaatcat 23256661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 29221889 - 29221618
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    |||| ||| |||||||||| |||||  | | |||||||||||||  | ||||||| ||| ||||||||| | |||||||||||||  | |||||||||||    
T  29221889 cttgtgggagtgcaaggtgctcaaccggactgggcctccaaatgccatgggcctcaaacaaaaaattaagtttaatacccaccccccacttaaataaaaa 29221790  T
Q  99 a--tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatc 196  Q
    |  ||||||||||||||| ||||||||||| | | |||||||||||||   ||||||||||| ||||  |||||||| ||||||| |||||||||||| |    
T  29221789 aaatatatatgttatatccttttctttcttcatttcacgtttgagtttttttctagactctaattctcgtttttgtacataaatctgatcctatcaaacc 29221690  T
Q  197 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    || | |||||||||||||||||||| | ||||||||| ||  ||| ||||||||| ||||||||||||||||    
T  29221689 actcttaatttgtataatcacttaaacggtcaatttggaagtctatttcattgaaggaatcacaacaatcat 29221618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 105 - 243
Target Start/End: Original strand, 16072498 - 16072636
Alignment:
Q  105 atgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaa 204  Q
    ||||||||||||||||||||||  ||||||||||||||||   ||||  |||||| ||| ||||||||| ||||||  |||||||||||| || ||||||    
T  16072498 atgttatatcattttctttcttcggtacacgtttgagtttttttctaagctctagatctcctttttgtacataaatttgatcctatcaaaccatccctaa 16072597  T
Q  205 tttgtataatcacttaatcagtcaatttgaaaagctatt 243  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  16072598 tttgtataatcatttaatcagtcaatttgaaaaactatt 16072636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 148 - 267
Target Start/End: Original strand, 29579827 - 29579947
Alignment:
Q  148 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 246  Q
    ||||||||||||||||  |||||||| ||||||| |||||||||||| ||||| ||||||||||||| | |||||||||||| ||||||||||| ||||     
T  29579827 tctagactctagttctattttttgtacataaatctgatcctatcaaaccacccataatttgtataattaattaatcagtcaaattgaaaagctatttcaa 29579926  T
Q  247 tgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||||    
T  29579927 tgaaagaatcacaacaatcat 29579947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 39372927 - 39372815
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatttaaataaaaa 98  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||  ||||||||| |||||||||||||||||||||| |||||  ||| |||||||||||    
T  39372927 cttgagggtgtgcaaggtgctcaaccaggccggacctccaaattctacgggcctttaacgaaaaattaaatctaatatccacccgccacttaaataaaaa 39372828  T
Q  99 atatatatgttat 111  Q
    |||||||||||||    
T  39372827 atatatatgttat 39372815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 267
Target Start/End: Complemental strand, 21791712 - 21791544
Alignment:
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    ||||||||||||  || ||||||||| | |||||| ||||||||||   |||||||||||||||| |||| || | ||||||  ||| | |||||| |||    
T  21791712 atatatatgttacttctttttctttcatcagtacatgtttgagttttt-tctagactctagttctcctttctgaacataaatttgatgccatcaaaccac 21791614  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |   ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  21791613 cttcaatgtgtataatcacttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatcat 21791544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 45172893 - 45172642
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaa 99  Q
    |||||||| |||||||||| ||||  | ||||| ||| |||| |||| | ||||| ||  ||||||||||||||||| ||||||| | ||||||||||||    
T  45172893 cttgagggagtgcaaggtgctcaatcaagccggacctacaaaagttatgtgcctcaaa--aaaaattaaatctaatatccacccccacttaaataaaaaa 45172796  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    |||||||||||           |||||||   |||||||||||||   |||||||| ||||||| |  | || | ||||||| | | |||||||| ||||    
T  45172795 tatatatgttac----------ttcttta---cacgtttgagttttt-tctagactttagttctccaatctggacataaatctggtactatcaaaccacc 45172710  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    | |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  45172709 c-taatttgtataatcacttaatcagtcaatttgaaaagctatttcatggaaagaatcacaacaatcat 45172642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 148 - 264
Target Start/End: Complemental strand, 35654097 - 35653980
Alignment:
Q  148 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 246  Q
    |||||||||||||||| |||| || | ||||||  ||| |||||||| ||||   |||||||||||||||||||||| |||||||||||||||| |||||    
T  35654097 tctagactctagttctactttctggacataaatatgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttgaaaagctatttcat 35653998  T
Q  247 tgaaagaatcacaacaat 264  Q
    ||||||||||||||||||    
T  35653997 tgaaagaatcacaacaat 35653980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 116 - 264
Target Start/End: Complemental strand, 43154936 - 43154788
Alignment:
Q  116 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 215  Q
    |||||||||||||| |||||| |||||||   |||||| ||||||||| ||||||| | ||||||  ||| |||||||| ||||   |||||||||||||    
T  43154936 ttttctttctttaggacacgtatgagttttt-tctagattctagttctactttttggacataaatttgatgctatcaaaccaccatcaatttgtataatc 43154838  T
Q  216 acttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    ||||||||||||||||| ||||| || |||||| ||||||||||||||||    
T  43154837 acttaatcagtcaatttaaaaagttatttcattaaaagaatcacaacaat 43154788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 34982039 - 34982288
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaa 99  Q
    |||||||| |||||| ||| ||||  | |||||||||||||| | || |||||||  |  ||||||||||||||||||||||||| | ||||||||||||    
T  34982039 cttgagggagtgcaatgtgctcaatcaagccgggcctccaaaagctatgggcctcaga--aaaaattaaatctaatacccacccctacttaaataaaaaa 34982136  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    |||||||||||           |||||||   |||||||||||||   |||||||| ||||| |||| | || | ||||||| | | ||| |||| || |    
T  34982137 tatatatgttac----------ttcttta---cacgtttgagttttt-tctagactttagtttttctatctggacataaatctggtactaacaaaccatc 34982222  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    || ||||||||||||||||||||||||||||| ||||| ||| ||| |||||||||||||||||||    
T  34982223 cccaatttgtataatcacttaatcagtcaattggaaaaactatttcgttgaaagaatcacaacaat 34982288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 144
Target Start/End: Complemental strand, 51066851 - 51066707
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaaa 99  Q
    ||||||| |||||||||  || || ||||||| |||| |||||||||||||||| ||| ||||||||| ||||||| |||  |||||||||||||||| |    
T  51066851 ttgagggagtgcaaggttctctaccaggccggacctctaaatgttacgggcctcaaacaaaaaattaagtctaatatccactccccatttaaataaaaga 51066752  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagttt 144  Q
     ||||||||||  |  |||||| |||| || ||||||||||||||    
T  51066751 aatatatgttacttttttttctctcttcagcacacgtttgagttt 51066707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 267
Target Start/End: Original strand, 5545276 - 5545396
Alignment:
Q  148 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 246  Q
    ||||||||||| ||||||| | || | ||||||  ||| | |||||| |||| | ||||||||||||||||||||| ||||||||| ||||||| |||||    
T  5545276 tctagactctaattcttctgtctggacataaatttgatgccatcaaaccaccaccaatttgtataatcacttaatcggtcaatttggaaagctatttcat 5545375  T
Q  247 tgaaagaatcacaacaatcat 267  Q
    | |||||||||||||||||||    
T  5545376 taaaagaatcacaacaatcat 5545396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 264
Target Start/End: Original strand, 22423600 - 22423748
Alignment:
Q  116 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 215  Q
    |||| ||||||| |||||||| |||||||   |||||||||||||||| |||| || | ||||||  ||| |||||||| ||||   ||||||||| |||    
T  22423600 ttttttttctttggtacacgtatgagttttt-tctagactctagttctactttctggacataaatttgatgctatcaaaccaccatcaatttgtatgatc 22423698  T
Q  216 acttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    ||||||||| |||||||||||| ||| || ||||||||||||| ||||||    
T  22423699 acttaatcaatcaatttgaaaaactattttattgaaagaatcaaaacaat 22423748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 55134210 - 55134275
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  55134210 aattggtataatgacttaatcagtcaatttgaaaagctatttcatagaaagaatcacaacaatcat 55134275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 264
Target Start/End: Original strand, 24449040 - 24449190
Alignment:
Q  116 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccct--aatttgtataa 213  Q
    ||||||||||| ||||||||| |||||||   |||||||||||||||| |||| || ||||||||  ||| |||||||| |||      |||||||||||    
T  24449040 ttttctttcttcagtacacgtatgagttttt-tctagactctagttctactttctggatataaatttgatgctatcaaaccactatatcaatttgtataa 24449138  T
Q  214 tcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||||||| ||||||||||||| ||| ||| | ||||||| |||||||||    
T  24449139 tcacttaatcggtcaatttgaaaaactatttcttagaaagaaccacaacaat 24449190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 267
Target Start/End: Complemental strand, 10575601 - 10575520
Alignment:
Q  187 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||| |||||  || |||||||||||||||||||||||||||  |||| || |||||||||| |||||||||||||||    
T  10575601 ctatcaaaccaccctcaacttgtataatcacttaatcagtcaatttagaaagttatttcattgaaataatcacaacaatcat 10575520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 29579655 - 29579766
Alignment:
Q  10 gtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaatatatatg 107  Q
    |||||| ||| ||||  ||||||| |||||||||| |||||| ||| ||| ||||||||| |||||| | ||||||  | |||||||||||| |||||||    
T  29579655 gtgcaaagtgctcaatcaggccggacctccaaatgctacgggtctcaaacaaaaaattaagtctaatgctcaccccccacttaaataaaaaaaatatatg 29579754  T
Q  108 ttatatcatttt 119  Q
    ||||||| ||||    
T  29579755 ttatatcctttt 29579766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 48512393 - 48512342
Alignment:
Q  93 taaaaaatatatatgttatatcattttctttctttagtacacgtttgagttt 144  Q
    ||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  48512393 taaaaaaaatatatgttatttctttttctttctttagtacacgtttgagttt 48512342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 63 - 232
Target Start/End: Complemental strand, 26329233 - 26329065
Alignment:
Q  63 aaattaaatctaatacc-caccccatttaaataaa-aaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagt 160  Q
    ||||||| |||||| || ||||||| ||||||||| ||| ||||||||||  || |||||||||||| |||||||||||| |||   |||||||| || |    
T  26329233 aaattaagtctaatgccacaccccacttaaataaataaaaatatatgttacttctttttctttctttggtacacgtttgaattt-tttctagactgtaat 26329135  T
Q  161 tcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaattt 232  Q
    ||| |  |||| | ||||||| ||| ||| |||| |||| | ||||| |||||||| | |||||||||||||    
T  26329134 tctcc--tttggacataaatctgatgctaccaaaccacctccaatttatataatcattcaatcagtcaattt 26329065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 179; Significance: 1e-96; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 12884403 - 12884134
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--ttaaataaaaa 98  Q
    |||||||||||| |||||  ||||||||| |||||||||| ||| ||||| |||||||||||||||||||||||||| ||| ||| |  |||||||||||    
T  12884403 cttgagggtgtgtaaggtactcaactaggtcgggcctccacatgctacggacctctaacgaaaaattaaatctaatatccaacccctacttaaataaaaa 12884304  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| | ||||||||| |||||||||||||||||||| |||    
T  12884303 atatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctagttttcctttttgtacataaatcggatcctatcaaaccac 12884204  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  12884203 ccctaatttgtataatcacttaatcagtcaatttaaaaagctatttcattgaaagaatcacaacaatcat 12884134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 51110368 - 51110101
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatttaaataaaaa 98  Q
    |||||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||  ||| |||||||||||    
T  51110368 cttgagggtgtgtaaggtgctcaaccaggccgggcctccaaatgctacgggcctctaacgaaaaattaaatctaatacctaccacccacttaaataaaaa 51110269  T
Q  99 a-tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatca 197  Q
    | |||||||||||||||||||||||||||||||||||||||||||||   |||||||| ||||| | ||||||||| |||||||||||||||||||| ||    
T  51110268 aatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactatagttatcctttttgtacataaatcggatcctatcaaacca 51110169  T
Q  198 cccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||||||| ||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  51110168 cccctaatttctataatcacttaatcagtcaatttagaaagctatttcattgaaagaatcacaacaat 51110101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 2 - 267
Target Start/End: Complemental strand, 48722637 - 48722367
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaa 99  Q
    |||||||||||||| ||| ||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||  | ||||||||||||    
T  48722637 ttgagggtgtgcaaagtgctcaaccaggccgggcctccaaatgctacgggcctctaacgaaaaattaaatttaatatccaccccccacttaaataaaaaa 48722538  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaat--ctagactctagttcttctttttgtatataaatcggatcctatcaaatca 197  Q
    ||||||||||||||| |||||||||||||||||||||||||||||   |  |||||||||| ||||  |||||||| |||||||||||||||||||| ||    
T  48722537 tatatatgttatatccttttctttctttagtacacgtttgagtttttttttctagactctatttctcatttttgtacataaatcggatcctatcaaacca 48722438  T
Q  198 cccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||    
T  48722437 cccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaataatcacaacaatcat 48722367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 14084966 - 14084699
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccc--catttaaataaaaa 98  Q
    ||||||||||||||||||| ||||| || |||| |||||||||||||||||||| |||||||||||||||||||||||||||||  || |||||||||||    
T  14084966 cttgagggtgtgcaaggtgctcaaccagaccggacctccaaatgttacgggcctttaacgaaaaattaaatctaatacccaccctccacttaaataaaaa 14084867  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    |||||||||||||||||||||||||||| |||||| |||||| |||   |||||||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  14084866 atatatatgttatatcattttctttcttcagtacaggtttgaattttt-tctagactctagttctcctttttgtacataaatctgatcctatcaaatcac 14084768  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatca 266  Q
    ||||||  ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| |||||    
T  14084767 ccctaaaatgtataatcacttaatcagtcaatttagaaagctatttcattgaaagaatcacaataatca 14084699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 8 - 267
Target Start/End: Original strand, 50552299 - 50552562
Alignment:
Q  8 gtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaa-aatatat 104  Q
    |||||||||||| ||||| || || || ||||||||| || || ||||||||||||||||||||||||||||||||||  | |||||||||| |||||||    
T  50552299 gtgtgcaaggtgctcaaccagaccaggtctccaaatgctatggacctctaacgaaaaattaaatctaatacccaccccccacttaaataaaaaaatatat 50552398  T
Q  105 atgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||   | |||||||||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  50552399 atgttatatcattttctttctttagtacacgtttgagtttttttgtagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaa 50552498  T
Q  205 tttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||    
T  50552499 tttgtataatcacttaatcggtcaatttgaaaagttatttcattgaaagaatcacaacaatcat 50552562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 17487551 - 17487280
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaa 98  Q
    ||||||||||||||||||  ||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  17487551 cttgagggtgtgcaaggtcctcaaccaagccgggcctccaaatgatacgggcctctaacgaaaaattaaatctaatacccaccccccacttaaataaaaa 17487452  T
Q  99 atatatatgttatatcattttctttcttta--gtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatc 196  Q
    |||||||||||||||  |||||||||||||  |||||| |||||||||   |||||||||||||||| |||||| || |||||||||||||||||||| |    
T  17487451 atatatatgttatattcttttctttctttagtgtacacatttgagtttttttctagactctagttctcctttttttacataaatcggatcctatcaaacc 17487352  T
Q  197 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||| |||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||    
T  17487351 acccctaatttatataatcacttaataaatcaatttggaaagttatttcattgaaagaatcacaacaatcat 17487280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 33124898 - 33124627
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    ||||||||||||||||||| ||||  |||| ||||||||||| | |||||||||||||||||||||||||| ||||||||| |||  | |||||||||||    
T  33124898 cttgagggtgtgcaaggtgctcaatcaggctgggcctccaaacgctacgggcctctaacgaaaaattaaatttaatacccatccccaacttaaataaaaa 33124799  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactcta--gttcttctttttgtatataaatcggatcctatcaaatc 196  Q
    |||||||||||||||| |||||||||||||||||||||||||||||   | |||||||||  ||||| |||||| || |||||||||||||||| ||| |    
T  33124798 atatatatgttatatccttttctttctttagtacacgtttgagtttttttttagactctatagttctcctttttctacataaatcggatcctattaaacc 33124699  T
Q  197 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  33124698 acctctaatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcat 33124627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 18128205 - 18127937
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaa-- 96  Q
    ||||||||||||||||||| ||||| |||||||||||| ||||| ||||| |||||||||||||||||||| |||||||||  ||||| |||||||||      
T  18128205 cttgagggtgtgcaaggtgctcaaccaggccgggcctctaaatgctacggacctctaacgaaaaattaaatttaatacccagcccccacttaaataaata 18128106  T
Q  97 aaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcctatcaaat 195  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||   | ||||| ||||||||| ||||| |||  |||||||||||||||||||     
T  18128105 aaaaatatatgttatatcattttctttctttagtacacgtttgagttttttttctagattctagttctcctttt-gtacgtaaatcggatcctatcaaac 18128007  T
Q  196 cacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  18128006 cacccataatttgtataatcacttaatcagtcaatttgaaaagctatttcattgcaagaatcacaacaat 18127937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 73 - 267
Target Start/End: Original strand, 30899526 - 30899723
Alignment:
Q  73 taatacccacccc-atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttcttttt 170  Q
    ||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   | ||||||||||||||| ||||||    
T  30899526 taatacccacccccacttaaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagttttttttctagactctagttctccttttt 30899625  T
Q  171 gtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  30899626 gtacataaatcggatcctatcaaatcacccctaatttgtataatcacttaattagtcaatttggaaagctatttcattgaaagaatcacaacaatcat 30899723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 10109516 - 10109787
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    ||||||||||||||||||| ||||||| |||| ||||  ||||  |||||| ||| ||||||||||||||||||||| |||||||  | |||||||||||    
T  10109516 cttgagggtgtgcaaggtgctcaactaagccgagcctttaaatactacgggtctcaaacgaaaaattaaatctaatatccaccccccacttaaataaaaa 10109615  T
Q  99 atata-tatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcctatcaaatc 196  Q
    | | | |||||||||||||||||||| |||| |||||||||||||||   | ||||||||||||||| ||||||||| |||||| ||||||||||||| |    
T  10109616 aaaaaatatgttatatcattttctttttttattacacgtttgagttttttttctagactctagttctcctttttgtacataaattggatcctatcaaacc 10109715  T
Q  197 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||| ||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  10109716 accactaatttgtataatcacttaatcagtcaatttggaaagcaatttcattgaaagaatcacaacaatcat 10109787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 11 - 264
Target Start/End: Complemental strand, 20905545 - 20905287
Alignment:
Q  11 tgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaata-tatatg 107  Q
    ||||||||||||||  ||||||||||||||||||| | ||| ||| ||| ||||||||| |||||||| ||||||  | |||||||||||| | ||||||    
T  20905545 tgcaaggtgatcaatcaggccgggcctccaaatgtcatgggtctcaaacaaaaaattaagtctaatactcacccccgacttaaataaaaaaaaatatatg 20905446  T
Q  108 ttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatt 206  Q
    ||||||  ||||||||||||||||||||||||||||| | | ||||||||||||||| ||||||||| |||||||  ||||||||||| || ||||||||    
T  20905445 ttatattcttttctttctttagtacacgtttgagttttatttctagactctagttctcctttttgtacataaatctaatcctatcaaaccagccctaatt 20905346  T
Q  207 tgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||||||||||| |||||||||||| ||  ||| |||||||||||||||||||||||    
T  20905345 tgtataatcacttattcagtcaatttggaagtctatttcattgaaagaatcacaacaat 20905287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 6150504 - 6150787
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--ttaaataaaaa 98  Q
    ||||||||||||||||||| ||||  ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |  ||||||| | |    
T  6150504 cttgagggtgtgcaaggtgctcaatcaggccgggcttccaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccctacttaaatatata 6150603  T
Q  99 ---------------atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcgg 183  Q
                   |||||||||||||||  |||||||||||   || ||||||||||||   |||||||||||||||| ||||||||| ||||||| |    
T  6150604 tatatatatatatatatatatatgttatattcttttctttcttcgctatacgtttgagtttttttctagactctagttctcctttttgtacataaatcag 6150703  T
Q  184 atcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatca 266  Q
    ||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6150704 atcctatcaaaccacccctaatttatataatcatttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 6150787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 20470526 - 20470706
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaa 98  Q
    ||||||||||||||||||| ||||| ||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||  |||||  ||||||||||    
T  20470526 cttgagggtgtgcaaggtgctcaaccaggccggacctacaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccccacataaataaaaa 20470625  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaat 180  Q
    |||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||| || | ||||||||| ||||||    
T  20470626 atatatatgttatatccttttctttctttagtacacgtttgagttt-tttctagactctaattatcctttttgtacataaat 20470706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 22 - 267
Target Start/End: Complemental strand, 29208341 - 29208095
Alignment:
Q  22 caactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaatatatatgttatatcattttc 120  Q
    |||| ||||||| |||||||||  || | ||||| ||| ||||||||| |||||||| |||||| | |||||||||||| |||||||||||||| |||||    
T  29208341 caaccaggccggacctccaaattatatgagcctcaaacaaaaaattaagtctaatactcacccccacttaaataaaaaa-atatatgttatatccttttc 29208243  T
Q  121 tttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcactta 220  Q
    ||||||  |||||||||||| |||   ||||||||||||||||  |||||||| |||||||  ||| ||||||| ||||||||||||||||||||| |||    
T  29208242 tttcttcggtacacgtttgaatttttttctagactctagttctcttttttgtacataaatctaatcatatcaaaccacccctaatttgtataatcattta 29208143  T
Q  221 atcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||| || ||  ||| ||||||||||||||||||||||||||    
T  29208142 atcagtcaatctggaagtctatttcattgaaagaatcacaacaatcat 29208095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 52055348 - 52055618
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccac--cccatttaaataaa-a 97  Q
    |||| ||| |||||||||| ||||| |||||| ||||||||||| || ||| ||| ||  ||||||||| ||||||||||||  |||| |||||| || |    
T  52055348 cttgggggagtgcaaggtgctcaaccaggccgagcctccaaatgctatgggtctcaaataaaaaattaagtctaatacccactccccacttaaatgaata 52055447  T
Q  98 aatatatatgttatatcattttctttctttagtacacgtttgagtttaaatct-agactctagttcttctttttgtatataaatcggatcctatcaaatc 196  Q
    || |||||||||||||||||||||||||| |||| ||||||||||||   | | ||||||||||||| ||||||||| |||||||  ||| |||||||      
T  52055448 aaaatatatgttatatcattttctttcttcagtatacgtttgagttttttttttagactctagttctcctttttgtacataaatctaatcatatcaaact 52055547  T
Q  197 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatca 266  Q
    | || |||||| |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||    
T  52055548 atccataatttatataatcacttaatcaatcaatttggaaagctatttcattgaaagaatcacaacaatca 52055618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 61 - 267
Target Start/End: Complemental strand, 27703737 - 27703526
Alignment:
Q  61 aaaaattaaatctaatacccacccc--atttaaat---aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagact 155  Q
    ||||||||| |||||||||||||||  | ||||||   |||||||||||||||||  || |||||||||||||||||||||||||||||   ||||||||    
T  27703737 aaaaattaagtctaatacccaccccccacttaaattaaaaaaaatatatatgttacttctttttctttctttagtacacgtttgagttttt-tctagact 27703639  T
Q  156 ctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaa 254  Q
    ||||||||  |||||| | ||||||  ||| |||||||| |||||| ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||    
T  27703638 ctagttctcttttttgaacataaatttgatgctatcaaaccacccccaatttgtataatcacttaatcagtcaatttggaaagctatttcatcgaaagaa 27703539  T
Q  255 tcacaacaatcat 267  Q
    |||||||||||||    
T  27703538 tcacaacaatcat 27703526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 48 - 267
Target Start/End: Original strand, 25930448 - 25930671
Alignment:
Q  48 cgggcctctaacgaaaaattaaatctaatacccaccc--catttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttta 145  Q
    |||||||| ||| |||| |||| | ||||||||||||  || |||||||||||| | || ||| ||||| |||||||| ||  ||||||||||||||||     
T  25930448 cgggcctcaaacaaaaatttaagtttaatacccaccctccacttaaataaaaaaaaaatgtgtgatatccttttcttttttcggtacacgtttgagtttt 25930547  T
Q  146 aa-tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-tt 243  Q
       ||||||||||||||||  |||||||| ||||||| ||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  25930548 ttgtctagactctagttctcatttttgtacataaatctgatcctatcaaactacccctaatttgtataatcacttaatcagtcaacttgaaaagctattt 25930647  T
Q  244 cattgaaagaatcacaacaatcat 267  Q
    ||||||||| ||||||||||||||    
T  25930648 cattgaaaggatcacaacaatcat 25930671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 61 - 267
Target Start/End: Complemental strand, 30005108 - 30004904
Alignment:
Q  61 aaaaattaaatctaatacccacc--ccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat--ctagactc 156  Q
    ||||||||| |||||||||||||  |||||||||||||||| |||| ||||||||| |||||||| ||  ||||||||||||||||   |  ||||||||    
T  30005108 aaaaattaagtctaatacccacctcccatttaaataaaaaa-atatgtgttatatccttttcttttttcggtacacgtttgagtttttttttctagactc 30005010  T
Q  157 tagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaat 255  Q
    || |||| ||||||||| ||||||| ||||||||||||      | |||||||||||||||||||||| | |||||||||||||| ||||||||||||||    
T  30005009 tacttctcctttttgtacataaatccgatcctatcaaa------ccaatttgtataatcacttaatcaattaatttgaaaagctatttcattgaaagaat 30004916  T
Q  256 cacaacaatcat 267  Q
    | ||||||||||    
T  30004915 cgcaacaatcat 30004904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 6333781 - 6333513
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaa 98  Q
    |||||||| |||||||||| || |  ||| ||| ||||||||||||||  ||||| ||| ||||||||  |||||||  ||  |||||||||||||||||    
T  6333781 cttgagggagtgcaaggtgctctaacagggcggacctccaaatgttacaagcctcaaacaaaaaattatgtctaatattcatcccccatttaaataaaaa 6333682  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    | ||||||||||  |  |||||||||||  ||||||||||||||||   | ||||||||||||||  ||  |||| ||||||| ||| |||||||| ||     
T  6333681 aaatatatgttacttatttttctttcttcggtacacgtttgagtttttctttagactctagttctcattcctgtacataaatctgatactatcaaacca- 6333583  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
     |||||| |||| |||||||||||||||||| ||| |||| || || ||| |||||||||||||||||||    
T  6333582 tcctaatctgtaaaatcacttaatcagtcaaattggaaagttattttattaaaagaatcacaacaatcat 6333513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 148 - 267
Target Start/End: Original strand, 50371081 - 50371201
Alignment:
Q  148 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagct-attcat 246  Q
    |||||||||||||||| |||| || |||||||   ||| ||||||||||||||  ||||||||||||||||||||||||||||||||||| ||  |||||    
T  50371081 tctagactctagttctcctttctggatataaagttgatgctatcaaatcaccctcaatttgtataatcacttaatcagtcaatttgaaaaactgtttcat 50371180  T
Q  247 tgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||||    
T  50371181 tgaaagaatcacaacaatcat 50371201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 130 - 267
Target Start/End: Original strand, 12971336 - 12971473
Alignment:
Q  130 tacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaa 229  Q
    |||||||||||||||   |||||||| ||||||| || | || | ||||||| |||  ||||||| |||||| |||||||||||||||||||||||||||    
T  12971336 tacacgtttgagttttt-tctagactttagttctcctatctggacataaatctgatattatcaaaccacccccaatttgtataatcacttaatcagtcaa 12971434  T
Q  230 tttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  12971435 tttgaaaagctatttcatcgaaagaatcacaacaatcat 12971473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 270
Target Start/End: Original strand, 5560399 - 5560553
Alignment:
Q  116 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 215  Q
    ||||||||||| |||||||||||||| ||   | |||||| |||||||  ||| || | ||||||| | | ||| |||| |||||| |||||||||||||    
T  5560399 ttttctttcttcagtacacgtttgagatttttt-tagactatagttctcatttctggacataaatctggtgctaccaaaccacccccaatttgtataatc 5560497  T
Q  216 acttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcatatt 270  Q
    ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||    
T  5560498 acttaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaatcatatt 5560553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 161 - 267
Target Start/End: Complemental strand, 28885775 - 28885668
Alignment:
Q  161 tcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 259  Q
    |||| |||||||  |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||  ||||||| ||||||| ||||||||||    
T  28885775 tcttttttttgtgcataaatcggatcctatcaaaccacccataatttgtataatcacttaatcaatcaattttgaaagctatttcattgtaagaatcaca 28885676  T
Q  260 acaatcat 267  Q
    ||||||||    
T  28885675 acaatcat 28885668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 207
Target Start/End: Original strand, 28189211 - 28189403
Alignment:
Q  21 tcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaa-----tatatatgttatat 113  Q
    ||||| |||||  |||| |||||| |||||| ||| ||| |||||| || |||||||||||||||  | ||||||||||||     ||||||||||||||    
T  28189211 tcaaccaggccaagccttcaaatgctacgggtctcaaacaaaaaatcaagtctaatacccaccccccacttaaataaaaaagaatatatatatgttatat 28189310  T
Q  114 cattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaattt 207  Q
    ||||||||||||| | |||||||||||||||   | |||||| ||||||| ||||||||| ||||||| ||||||||||||  ||| |||||||    
T  28189311 cattttctttcttcaatacacgtttgagttt-tttttagactttagttctcctttttgtacataaatctgatcctatcaaactacctctaattt 28189403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 2 - 74
Alignment:
Q  196 cacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||| |||||||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||||||    
T  2 cacccttaatttgtataatcacttaatcagtcaatttggaaagtgatttcattgaaagaatcacaacaatcat 74  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 264
Target Start/End: Complemental strand, 37873898 - 37873762
Alignment:
Q  129 gtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtca 228  Q
    |||||||| |||||||   |||||||||||||||| |||| |  | ||||||  ||| |||||||| ||||   |||||||||| ||||||||||||| |    
T  37873898 gtacacgtatgagtttttttctagactctagttctactttctagacataaatttgatgctatcaaaccaccatcaatttgtatagtcacttaatcagtta 37873799  T
Q  229 atttgaaaagct-attcattgaaagaatcacaacaat 264  Q
    ||||||||| ||  |||||||||||||||||||||||    
T  37873798 atttgaaaaactgtttcattgaaagaatcacaacaat 37873762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 44836838 - 44836726
Alignment:
Q  148 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 246  Q
    |||||| ||||||||| |||| || | ||||||  ||| |||||||| ||||   ||||||||||||||||||||||||||||||||||| ||| ||||     
T  44836838 tctagattctagttctactttctgaacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaaactatttcac 44836739  T
Q  247 tgaaagaatcaca 259  Q
    |||||||||||||    
T  44836738 tgaaagaatcaca 44836726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 2022064 - 2021942
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaataaaaaat 100  Q
    |||| ||| |||||||||  ||||| ||||||||| |||||||  ||| | |||| ||| ||||||||| ||||||||| ||||||||||||| |||||     
T  2022064 cttgggggagtgcaaggtactcaaccaggccgggcttccaaatactacagacctcaaacaaaaaattaagtctaatacctaccccatttaaattaaaaaa 2021965  T
Q  101 atatatgttatatcattttcttt 123  Q
    ||||  |||||||| ||||||||    
T  2021964 atatgagttatatccttttcttt 2021942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 17674416 - 17674354
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  17674416 aatttgaataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaat 17674354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 13120929 - 13120866
Alignment:
Q  202 taatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  13120929 taatttgaataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcaccacaat 13120866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 267
Target Start/End: Original strand, 1269385 - 1269618
Alignment:
Q  29 gccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa-atatatatgttatatcattttctttct 125  Q
    ||||||| || ||| |||| ||||||| ||  || |||||| ||||||| |||| ||  | ||||||||||| ||||||||||| | || |||||||| |    
T  1269385 gccgggcttctaaaagttatgggcctcaaaaaaacaattaagtctaatatccacacctcacttaaataaaaatatatatatgttttttctttttcttttt 1269484  T
Q  126 ttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcag 225  Q
    |  ||||||||||||||||   ||||||||||| |||| |||| |  | ||||||| ||| |||| ||| |||||| ||||||||         ||| ||    
T  1269485 tctgtacacgtttgagttt-tttctagactctaattctcctttctagacataaatctgatgctatgaaaccacccccaatttgta--------aaattag 1269575  T
Q  226 tcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||| |||||| |||||||||||||||||||    
T  1269576 tcaatttgaaaagctatttcattaaaagaatcacaacaatcat 1269618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 22386899 - 22386837
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||| | |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  22386899 aatttgaacaatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaat 22386837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 148 - 264
Target Start/End: Original strand, 42740057 - 42740174
Alignment:
Q  148 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 246  Q
    |||||||||||||||| |||| || | |||| |  ||| ||||||||  |||   |||||||||||| ||||||| |||||||||||||| ||| |||||    
T  42740057 tctagactctagttctactttctggacataagtttgatgctatcaaacaaccatcaatttgtataataacttaattagtcaatttgaaaaactatttcat 42740156  T
Q  247 tgaaagaatcacaacaat 264  Q
    |||||||||| |||||||    
T  42740157 tgaaagaatcgcaacaat 42740174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 264
Target Start/End: Original strand, 15441193 - 15441355
Alignment:
Q  103 atatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccct 202  Q
    ||||||||  || |||||||||||   |||||||||||||||   |||||||||||||||| |||| |  | ||||||   || |||||||| ||||       
T  15441193 atatgttacttctttttctttcttcgatacacgtttgagttttt-tctagactctagttctcctttctagacataaatataatgctatcaaaccacctac 15441291  T
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcatt-gaaagaatcacaacaat 264  Q
    |||||||||||||||||||||| |||||||  ||||||| ||||||  ||||||||||||||||    
T  15441292 aatttgtataatcacttaatcactcaatttataaagctatttcattaaaaagaatcacaacaat 15441355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 9777380 - 9777481
Alignment:
Q  168 tttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt--cattgaaagaatcacaacaatc 265  Q
    |||| ||||||||| ||| ||| |||| |||||| ||||| |||||||||| |||||||||||||||| | |||||   ||  |||||||||||||||||    
T  9777380 tttggatataaatctgatgctaccaaaccacccccaatttatataatcactcaatcagtcaatttgaataactatttcaataaaaagaatcacaacaatc 9777479  T
Q  266 at 267  Q
    ||    
T  9777480 at 9777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 24556808 - 24556870
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||| ||||||||||||| |||||||||||||| ||| |||||| ||||||||||||||||    
T  24556808 aatttgaataatcacttaataagtcaatttgaaaaactatttcatttaaagaatcacaacaat 24556870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 94 - 257
Target Start/End: Original strand, 3907366 - 3907528
Alignment:
Q  94 aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaa 193  Q
    |||||| | ||||||||  || |||||||| |||||||||||||| |||||   | |||||| || || |||||| || | ||||||  |||  ||||||    
T  3907366 aaaaaaaaaatatgttacttctttttctttttttagtacacgtttaagttttttt-tagactttattttttctttatgaacataaatacgatggtatcaa 3907464  T
Q  194 atcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatca 257  Q
    | ||| || |||||||||||||| ||||||| ||||||||||||  || ||||||||||||||||    
T  3907465 accactcc-aatttgtataatcatttaatcaatcaatttgaaaaattatttcattgaaagaatca 3907528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 32810415 - 32810373
Alignment:
Q  201 ctaatttgtataatcacttaatcagtcaatttgaaaagctatt 243  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  32810415 ctaatttgaataatcacttaatcaatcaatttgaaaagctatt 32810373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12971220 - 12971329
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    |||||||| |||||||||| ||||  | |||||||||||||  |  | |||||||  |  ||||||||| |||||||||||||||  | |||||||||||    
T  12971220 cttgagggagtgcaaggtgctcaatcaagccgggcctccaagagcaatgggcctcaga--aaaaattaactctaatacccaccccccacttaaataaaaa 12971317  T
Q  99 atatatatgtta 110  Q
    ||||||||||||    
T  12971318 atatatatgtta 12971329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 26486513 - 26486407
Alignment:
Q  116 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 215  Q
    |||| |||||||||||||||| |||||||   |||| ||||||||||| |||| || | ||||||  ||| |||||||| || |   |||||||||||||    
T  26486513 ttttttttctttagtacacgtatgagttttt-tctaaactctagttctactttctggaaataaatttgatgctatcaaaccatcatcaatttgtataatc 26486415  T
Q  216 acttaatc 223  Q
    ||||||||    
T  26486414 acttaatc 26486407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 28886205 - 28886140
Alignment:
Q  39 caaatgttacgggcctctaacgaaaaattaaatctaatacccacc-ccatttaaataaaaaatata 103  Q
    ||||||||||| |||| ||||||| |||||||||||||| |||||  || | ||||||||||||||    
T  28886205 caaatgttacgtgcctttaacgaagaattaaatctaatatccaccttcactcaaataaaaaatata 28886140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 162; Significance: 2e-86; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 2 - 267
Target Start/End: Original strand, 13474427 - 13474697
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaataaaa---- 97  Q
    |||||||||||||||||| | ||| |||| ||| |||||||||||| |||||| ||||||||||||||||||||||| ||||||| ||||||||||        
T  13474427 ttgagggtgtgcaaggtgcttaaccaggctgggtctccaaatgttatgggcctttaacgaaaaattaaatctaatactcaccccacttaaataaaaaaaa 13474526  T
Q  98 aatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatca 197  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||   |||| |||||||||||  |||||||| |||||||||||||||||||| ||    
T  13474527 aatatatatattatatcattttttttctttagtacacgtttgagtttttttctaaactctagttctcttttttgtacataaatcggatcctatcaaacca 13474626  T
Q  198 cccctaatttgtataatcacttaatcagtcaatttgaaaagct-attcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  13474627 cccctaatttgtataatcacttaatcagtcaatttgaaaagttgtttcattgaaagaatcacaacaatcat 13474697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 26378042 - 26377771
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc---atttaaataaaa 97  Q
    ||||||||||||||||||| ||||| ||| ||||||| |||||  |||||| |||||||||||||||||||||||||  ||||||   | ||||||||||    
T  26378042 cttgagggtgtgcaaggtgctcaaccaggtcgggccttcaaattctacgggtctctaacgaaaaattaaatctaataatcacccccccacttaaataaaa 26377943  T
Q  98 aatatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcctatcaaatc 196  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||   | ||||||||||||||| ||||||||| ||||||| |||||||||||| |    
T  26377942 aatatatatgttatatttttttctttctttagtacacgtttgagttttttttctagactctagttctcctttttgtacataaatcagatcctatcaaacc 26377843  T
Q  197 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||||||| ||||||||| ||| |||||| ||||||||||||||||||||||||||    
T  26377842 acccctaatttgtataatcacttattcagtcaatgtgagaagctatttcattgaaagaatcacaacaatcat 26377771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 13423659 - 13423931
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaa 98  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |   |||| |||||||||||    
T  13423659 cttgagggtgtgcaaggtgctcaaccaggcggggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacctatctcccacttaaataaaaa 13423758  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgag---tttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaat 195  Q
    |||||||||||||||| |||||||||||||| |||||| ||||   |||   | ||||||||||||||  |||||||| ||||||||||||||||||||     
T  13423759 atatatatgttatatccttttctttctttagcacacgtatgagttttttttttttagactctagttctcttttttgtacataaatcggatcctatcaaac 13423858  T
Q  196 cacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||  ||||||||||||||||||||||||| |||||||  ||||||| ||||||||||||||||||||||||||    
T  13423859 cattcctaatttgtataatcacttaatcaatcaatttagaaagctatttcattgaaagaatcacaacaatcat 13423931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 27 - 267
Target Start/End: Original strand, 13656033 - 13656277
Alignment:
Q  27 aggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc-ccatttaaataaaaaatatatatgttatatcattttctttct 125  Q
    |||| ||||||||||||  | |||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  13656033 aggctgggcctccaaatacttcgggcctctaacgaaaaattaaatctaataaccacctccacttaaataaaaaatatatatgttatatcattttctttct 13656132  T
Q  126 ttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct---atcaaatcacccctaatttgtataatcacttaat 222  Q
    |||||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||||||   |  ||| || ||||||||||||||||||||||||    
T  13656133 ttagtacacgtttgagttt-tttctagactctagttctcctttttgtacataaatcggatcctaaaaaaaaaccatccctaatttgtataatcacttaat 13656231  T
Q  223 cagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||||||||||| || ||||||||||||||||||||||||||    
T  13656232 cagtcaatttgaaaagttatttcattgaaagaatcacaacaatcat 13656277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 36718832 - 36718570
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccac--cccatttaaataaaaaa 99  Q
    |||||| ||||||||||| ||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||| | |  |||| ||||||||||||    
T  36718832 ttgaggatgtgcaaggtgctcaactaggccgggcctccgaatgctacgggtctctaacgaaaaat-aaatctaatactctctccccacttaaataaaaaa 36718734  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    ||||||||||||||  |||||||| |||||||||||| |||||||   | ||||||||||||||| ||||||||| || ||||||||||||||||| |||    
T  36718733 tatatatgttatattcttttctttttttagtacacgtgtgagttttttttctagactctagttctcctttttgtacatgaatcggatcctatcaaaccac 36718634  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaac 261  Q
    |||||||||||||||||| |||||||||||||||| |||| || || |||||||||||||||||    
T  36718633 ccctaatttgtataatcatttaatcagtcaatttgtaaagttattttattgaaagaatcacaac 36718570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 12661102 - 12661373
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccc--catttaaataaaaa 98  Q
    ||||||||||||||||||| ||||| ||  |||||||||||||| ||||| |||| | | ||||||||||||||||| | ||||  || |||||||||||    
T  12661102 cttgagggtgtgcaaggtgctcaaccagatcgggcctccaaatgctacggacctcaatcaaaaaattaaatctaatatctaccctccacttaaataaaaa 12661201  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctag------ttcttctttttgtatataaatcggatcctatca 192  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||   ||||||||||||      || || |||||||||||||||||||| ||||||    
T  12661202 atatatatgttatttcattttctttctttagtacacgtttgagttt-tttctagactctagtttttttttttttttttgtatataaatcggattctatca 12661300  T
Q  193 aatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    || |||| ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  12661301 aaccacctctaatttgtataatcacttaaccagtcaatttggaaagctatttcattgaaagaatcacaacaat 12661373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 209
Target Start/End: Original strand, 8398778 - 8398989
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaa 99  Q
    |||||||||||||||||| ||||  ||||||| |||||||||| |||||||| |||||||||||||||||||||||| ||||||  | ||||||||||||    
T  8398778 ttgagggtgtgcaaggtgctcaatcaggccggacctccaaatgctacgggcccctaacgaaaaattaaatctaatactcaccccccacttaaataaaaaa 8398877  T
Q  100 tat--atatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatca 197  Q
    |||  |||||||||||| |||||||||||||||||||||||||||||   | ||||||||||||||  |||||||| |||||||||||||||||||| ||    
T  8398878 tatatatatgttatatccttttctttctttagtacacgtttgagtttttttttagactctagttctcatttttgtacataaatcggatcctatcaaacca 8398977  T
Q  198 cccctaatttgt 209  Q
    ||||||||||||    
T  8398978 cccctaatttgt 8398989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 19099581 - 19099311
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    |||| ||| |||||||||| ||||| ||| |||||||||||||  |||||||||| ||| ||||||||| |||||||||||||||  |||||||||||||    
T  19099581 cttgtgggagtgcaaggtgctcaaccaggtcgggcctccaaatactacgggcctcaaacaaaaaattaagtctaatacccaccccccatttaaataaaaa 19099482  T
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatct--agactctagttcttctttttgtatataaatcggatcctatcaaatc 196  Q
    | | || ||||||||| ||||| || ||  | ||| ||||||||||   | |  ||||| ||||||| ||||||||| ||||||| |||||||||||| |    
T  19099481 aaa-atgtgttatatccttttcctttttcggcacatgtttgagtttttttttttagactatagttctcctttttgtacataaatctgatcctatcaaacc 19099383  T
Q  197 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    | |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  19099382 atccctaatttgtataatcacttaatcagtcaatttaaaaagctatttcattgaaagaatcacaacaatcat 19099311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 26311851 - 26312029
Alignment:
Q  48 cgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttta 145  Q
    |||||||||||||||||||||||||||||||| |||||  | ||||||||||||||||||||||||||| || | |  ||||||||| |||||||||||     
T  26311851 cgggcctctaacgaaaaattaaatctaatacctacccccaacttaaataaaaaatatatatgttatatctttatatc-ctttagtactcgtttgagtttt 26311949  T
Q  146 aat-ctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatca 224  Q
      | ||||| ||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  26311950 ttttctagattctagttcttctttttgtacataaatcggatcctatcaaaccacccataatttgtataatcacttaatca 26312029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 43511433 - 43511685
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc-ccatttaaataaaaaa 99  Q
    |||||||| |||||||||| ||||  | ||||| |||||||| | || |||||||  |  ||||||||||||||||||||||| ||| ||||||||||||    
T  43511433 cttgagggagtgcaaggtgctcaatcaagccggacctccaaaagctatgggcctcaga--aaaaattaaatctaatacccacctccacttaaataaaaaa 43511530  T
Q  100 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 199  Q
    |||||||||||           |||||||   |||||||||||||   |||||||| ||||||| || | || | ||||||| | | |||||||| ||||    
T  43511531 tatatatgttac----------ttcttta---cacgtttgagttttt-tctagactttagttctcctatctggacataaatctggtactatcaaaccacc 43511616  T
Q  200 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    || ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  43511617 cccaatttgtataatcacttaatcagtcaatttgaaaagctatttcatggaaagaatcacaacaatcat 43511685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 267
Target Start/End: Original strand, 29156120 - 29156257
Alignment:
Q  130 tacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaa 229  Q
    |||||||||||||||   |||||||| ||||| | || | || | ||||||| | | |||||||| ||||||||||||||||||||||||||||||||||    
T  29156120 tacacgtttgagttttt-tctagactatagttatcctatctgaacataaatctggtactatcaaaccacccctaatttgtataatcacttaatcagtcaa 29156218  T
Q  230 tttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||| ||||| || ||||||||||||||||||||||||||    
T  29156219 tttaaaaagttatttcattgaaagaatcacaacaatcat 29156257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 148 - 264
Target Start/End: Original strand, 138091 - 138208
Alignment:
Q  148 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 246  Q
    |||||||||||||||| ||||| | | ||||||  ||| |||||||| ||||   ||||||||||||||||||||||||||||||||||||||| |||||    
T  138091 tctagactctagttctacttttcggacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcat 138190  T
Q  247 tgaaagaatcacaacaat 264  Q
    ||||| ||||||||||||    
T  138191 tgaaataatcacaacaat 138208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 187 - 267
Target Start/End: Complemental strand, 42291959 - 42291878
Alignment:
Q  187 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  42291959 ctatcaaatcaccaccaatttgtataatcacttaatcagtcaatttgaaaatctatttcattgaaagaatcacaacaatcat 42291878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 148 - 267
Target Start/End: Complemental strand, 17514053 - 17513933
Alignment:
Q  148 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 246  Q
    |||||||| ||||||| || | || ||||||||| | | ||| |||| |||||| |||||||||||||||||||||||||||||||||||| || ||||     
T  17514053 tctagactttagttctcctatctggatataaatctggtactaacaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagttatttcac 17513954  T
Q  247 tgaaagaatcacaacaatcat 267  Q
    |||||||||||||||||||||    
T  17513953 tgaaagaatcacaacaatcat 17513933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 130 - 267
Target Start/End: Complemental strand, 10591407 - 10591270
Alignment:
Q  130 tacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaa 229  Q
    |||||||||||||||   |||||||| ||||||| || | || | ||||||  | | |||||||| |||||| |||||||||||||||||||||||| ||    
T  10591407 tacacgtttgagttttt-tctagactttagttctcctatctgaacataaatatggtactatcaaaccacccccaatttgtataatcacttaatcagttaa 10591309  T
Q  230 tttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  10591308 tttgaaaagttatttcattgaaagaatcacaacaatcat 10591270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 187 - 267
Target Start/End: Original strand, 20975971 - 20976052
Alignment:
Q  187 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    |||||||| |||| | |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20975971 ctatcaaaccaccaccaatttgtataatcatttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcat 20976052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 267
Target Start/End: Complemental strand, 4734802 - 4734579
Alignment:
Q  29 gccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaataaaaaatatatatgttatatcattttctttcttta 128  Q
    |||||||||||||| | || |||||||  |  ||||||||| |||||||||||||||| |||||||||||||||||||||||           |||||||    
T  4734802 gccgggcctccaaaagctatgggcctcata--aaaaattaactctaatacccaccccacttaaataaaaaatatatatgttac----------ttcttta 4734715  T
Q  129 gtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtca 228  Q
       || ||||||||||   |||||||| ||||||| || | || | ||||||| | | |||||||| |||| | ||||||||||||| ||| |||| |||    
T  4734714 ---catgtttgagttttt-tctagactttagttctcctatctggacataaatctggtactatcaaaccaccaccaatttgtataatcccttgatcactca 4734619  T
Q  229 atttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  4734618 atttgaaaatctatttcattgaaagaatcacaacaatcat 4734579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 255
Target Start/End: Original strand, 27351179 - 27351404
Alignment:
Q  34 gcctccaaatgttacgggcctctaacgaaaaattaaa-tctaatacccaccccat--ttaaataaaa-aatatatatgttatatcattttctttctttag 129  Q
    |||||||||||||| ||||||| ||  | ||||| || |||||||| |||||| |  || ||||||| || ||||||||||  || ||||||||||| ||    
T  27351179 gcctccaaatgttatgggcctcaaaaaataaatttaagtctaatactcaccccctacttgaataaaataaaatatatgttacttccttttctttcttcag 27351278  T
Q  130 tacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaa 229  Q
    || ||||||||| ||   |||||||||||||||| |||| || | ||||||  | | |||||||| |||| | ||||||||||| |||||||||||||||    
T  27351279 tatacgtttgagatttt-tctagactctagttctcctttctgaacataaatttggtgctatcaaaccacctccaatttgtataaccacttaatcagtcaa 27351377  T
Q  230 tttgaaaagcta-ttcattgaaagaat 255  Q
    |||| |||| || ||||||||||||||    
T  27351378 tttggaaagttatttcattgaaagaat 27351404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 18873458 - 18873521
Alignment:
Q  202 taatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  18873458 taatttgtataaccacttaatcagccaatttgaaaagctatttcattgaaagaatcacaacaat 18873521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 148 - 267
Target Start/End: Original strand, 931327 - 931442
Alignment:
Q  148 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctattcatt 247  Q
    |||||||| |||||||  ||| | |||||||||  ||| |||| ||||||| || ||||||||||||||||||||||||||||||  ||||||    |||    
T  931327 tctagactatagttctcttttctatatataaatttgatgctattaaatcacacccaatttgtataatcacttaatcagtcaatttagaaagct----att 931422  T
Q  248 gaaagaatcacaacaatcat 267  Q
    ||||||||||||| ||||||    
T  931423 gaaagaatcacaataatcat 931442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 267
Target Start/End: Original strand, 40956217 - 40956380
Alignment:
Q  99 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 198  Q
    ||||||||||||  || |||||||||||     |||||||||||||   |||||||||||||||| |||| || | ||||||| ||| | ||||||        
T  40956217 atatatatgttacttctttttctttctt-----cacgtttgagttttt-tctagactctagttctcctttgtggacataaatctgatgcaatcaaacatt 40956310  T
Q  199 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    | | |||||||||||||||||||||| | |||||||||| ||| |||||| |||||||||||||||||||    
T  40956311 ctccaatttgtataatcacttaatcatttaatttgaaaaactatttcattaaaagaatcacaacaatcat 40956380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 20975800 - 20975906
Alignment:
Q  2 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc-ccatttaaataaaaaat 100  Q
    ||||||| |||||||||| ||||  | |||||||||||||| | || |||||||    |||||||||| ||||||||||||| ||| |||||||||||||    
T  20975800 ttgagggagtgcaaggtgctcaatcaagccgggcctccaaaagctatgggcctca---gaaaaattaactctaatacccacctccacttaaataaaaaat 20975896  T
Q  101 atatatgtta 110  Q
    ||||||||||    
T  20975897 atatatgtta 20975906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 3349784 - 3349726
Alignment:
Q  210 ataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  3349784 ataatgacttaatcagtcaatttgaaaagctatttcatagaaagaatcacaacaatcat 3349726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 5829387 - 5829450
Alignment:
Q  203 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||||||||||    
T  5829387 aatttgtataatcacttaatcagtcaattt--aaagctatttcattaaaagaatcacaacaatcat 5829450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 224
Target Start/End: Complemental strand, 8379691 - 8379562
Alignment:
Q  94 aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaa 193  Q
    |||||| | ||||||||| || |||||||||||  |||||| |||||||||   ||||||||||  ||||  ||| || | ||||||  |||  ||||||    
T  8379691 aaaaaaaaaatatgttatttctttttctttcttcggtacacatttgagttttt-tctagactctcattctcatttatggacataaatatgatgttatcaa 8379593  T
Q  194 atcacccctaatttgtataatcacttaatca 224  Q
    ||||||||||||||||||||| |||||||||    
T  8379592 atcacccctaatttgtataattacttaatca 8379562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 260
Target Start/End: Original strand, 10033493 - 10033607
Alignment:
Q  148 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaat-cagtcaatttgaaaagcta-ttca 245  Q
    |||||||||||||||| |||| |||| ||||||  ||| |||||||| | ||   |||||||||||||||| | |  |||||||||||||||||| || |    
T  10033493 tctagactctagttctactttctgtacataaatttgatgctatcaaacccccatcaatttgtataatcactgattaaagtcaatttgaaaagctatttta 10033592  T
Q  246 ttgaaagaatcacaa 260  Q
    |||||||||||||||    
T  10033593 ttgaaagaatcacaa 10033607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 17325847 - 17325909
Alignment:
Q  204 atttgtataatcacttaatcagtcaatttg-aaaagcta-ttcattgaaagaatcacaacaat 264  Q
    ||||| |||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||    
T  17325847 atttgaataatcacttaatcagtcaatttgaaaaaactatttcattgaaagaatcacaacaat 17325909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 7390460 - 7390400
Alignment:
Q  205 tttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    |||||||||||||||||||||||||||| ||||| || ||||| ||||||||||| |||||    
T  7390460 tttgtataatcacttaatcagtcaatttaaaaagttatttcatcgaaagaatcacgacaat 7390400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 204 - 267
Target Start/End: Original strand, 33281677 - 33281741
Alignment:
Q  204 atttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    ||||||||||||||||||| ||||||||| ||||| || ||||||||||||||| ||| ||||||    
T  33281677 atttgtataatcacttaattagtcaatttaaaaagttatttcattgaaagaatcccaataatcat 33281741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 42292129 - 42292022
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccac-cccatttaaataaaaaa 99  Q
    |||||||| |||||||||| |||| ||| ||||||||||||| | ||  ||||||  |  ||||||||| |||||||| ||| |||| ||||||||||||    
T  42292129 cttgagggagtgcaaggtgctcaattag-ccgggcctccaaaagctataggcctcaga--aaaaattaactctaatactcacgcccacttaaataaaaaa 42292033  T
Q  100 tatatatgtta 110  Q
    |||||||||||    
T  42292032 tatatatgtta 42292022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 17514138 - 17514092
Alignment:
Q  61 aaaaattaaatctaataccca-ccccatttaaataaaaaatatatat 106  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||    
T  17514138 aaaaattaaatctaatacccacccccacttaaataaaaaatatatat 17514092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 10591519 - 10591418
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaa 99  Q
    |||||||| |||||||||| ||||  | |||||||||||||| | || |||| | ||  ||||||| || ||||||||||||||| ||||||||||||||    
T  10591519 cttgagggagtgcaaggtgctcaatcaagccgggcctccaaaagctatgggctt-ta--gaaaaatcaactctaatacccacccccatttaaataaaaaa 10591423  T
Q  100 tatat 104  Q
    |||||    
T  10591422 tatat 10591418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 243
Target Start/End: Original strand, 23069099 - 23069262
Alignment:
Q  81 accccatttaaataaa--aaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataa 178  Q
    |||||| |||||||||  ||| ||||||||||  || |||||||||||   |||||||||| ||||   | || |||||| |||| |||| || | ||||    
T  23069099 accccacttaaataaataaaagatatatgttacttctttttctttcttcgttacacgtttgtgttttttt-tatactctaattctcctttctgaacataa 23069197  T
Q  179 atcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt 243  Q
    ||  ||| ||| |||| |||||| ||||||||||||| |||||||| || ||||| |||||||||    
T  23069198 atatgatgctagcaaaccacccccaatttgtataatcccttaatcattcgatttggaaagctatt 23069262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 37029108 - 37029054
Alignment:
Q  187 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt 243  Q
    ||||||||||| ||  |||||||||||||||||||||| ||||||| ||||||||||    
T  37029108 ctatcaaatcatcc--aatttgtataatcacttaatcaatcaatttaaaaagctatt 37029054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 267
Target Start/End: Original strand, 40779139 - 40779258
Alignment:
Q  148 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt-cat 246  Q
    |||||| ||||||||| |||| || | ||||||  |||  |||||||  | ||| |||||||||||||  ||||| |||||||||||||| ||||| |||    
T  40779139 tctagagtctagttctcctttctgaacataaatttgatgttatcaaactatccccaatttgtataatcgtttaataagtcaatttgaaaaactattccat 40779238  T
Q  247 tgaaagaatcacaacaatcat 267  Q
    || | ||||||||||||||||    
T  40779239 tg-aggaatcacaacaatcat 40779258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 16515533 - 16515588
Alignment:
Q  210 ataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaat 264  Q
    ||||||||||||||| ||||||||||||  || || ||||||||||||||||||||    
T  16515533 ataatcacttaatcaatcaatttgaaaaattattttattgaaagaatcacaacaat 16515588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 29156062 - 29156113
Alignment:
Q  61 aaaaattaaatctaatacccacc-ccatttaaat-aaaaaatatatatgtta 110  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||    
T  29156062 aaaaattaaatctaatacccacctctatttaaataaaaaaatatatatgtta 29156113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 138
Target Start/End: Original strand, 40778675 - 40778785
Alignment:
Q  31 cgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaa-aatatatatgttatatcattttctttcttt 127  Q
    |||||||||||| |||| | ||||| ||| ||| ||||| |||||||| ||||||  | |||||||||| || ||||||||||  || |||||||||||     
T  40778675 cgggcctccaaaagttatgagcctcaaacaaaatattaagtctaatactcaccccctacttaaataaaataaaatatatgttacttccttttctttcttg 40778774  T
Q  128 agtacacgttt 138  Q
    ||| |||||||    
T  40778775 agtgcacgttt 40778785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 3349917 - 3349869
Alignment:
Q  62 aaaattaaatctaatacccaccccatttaaataaaaaatatatatgtta 110  Q
    |||||||| | ||||||||||| || |||||||||||||| ||||||||    
T  3349917 aaaattaattgtaatacccacctcacttaaataaaaaatacatatgtta 3349869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 161; Significance: 7e-86; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 16503 - 16780
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaa 98  Q
    ||||||||||||||||||| ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | ||||||||||     
T  16503 cttgagggtgtgcaaggtgctcaaccagaccgggcctccaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccccacttaaataaaag 16602  T
Q  99 atatatatgt-tatatcat---tttctttc-tttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaa 193  Q
    |||||||| | ||||| ||   ||| | || ||||||||||||||||||||   |||||||||||||||| ||||||||| |||||||||||||||||||    
T  16603 atatatatatatatattatatctttatatcctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaa 16702  T
Q  194 atcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcatatt 270  Q
    | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  16703 accacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacgatcatatt 16780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 90 - 274
Target Start/End: Complemental strand, 17307 - 17122
Alignment:
Q  90 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagt-ttaaatctagactctagttcttctttttgtatataaatcggatcct 188  Q
    ||||||||||||||||||||||| | || | |  ||||||||||||||||| | ||   ||||||||||||||||  |||||||||||||||||||||||    
T  17307 aaataaaaaatatatatgttataactttatatc-ctttagtacacgtttgaatgttttttctagactctagttctcatttttgtatataaatcggatcct 17209  T
Q  189 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcatattcttc 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||| ||||||    
T  17208 atcaaatcacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcgttgaaagaatcacaacaatcattttcttc 17122  T

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Target: scaffold0181; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 18227 - 18128
Alignment:
Q  1 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaa 98  Q
    |||||||||||| |||||| ||||  ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||  |||||||||||||||||    
T  18227 cttgagggtgtgaaaggtgttcaatcaggccgggcctccaaatgttatgggcctttaacgaaaaattaaatctaatactcaccccccatttaaataaaaa 18128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 5 - 182
Target Start/End: Complemental strand, 23026 - 22846
Alignment:
Q  5 agggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatttaaataaaaaatat 102  Q
    |||||||| |||||| ||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||| |||||  ||| |||||||||||||||    
T  23026 agggtgtgtaaggtgctcaaccaggccggacctccaaatgatacgggtctctaacgaaaaattaaatctaatatccaccctccacttaaataaaaaatat 22927  T
Q  103 atatgttatatcattttctttctttagtacacgtttgag-tttaaatctagactctagttcttctttttgtatataaatcg 182  Q
    |||||||||||| |||| ||||||||||||||||||||| |||   | ||||||||| |||| ||||||||| ||||||||    
T  22926 atatgttatatccttttatttctttagtacacgtttgagttttttttgtagactctaattctcctttttgtacataaatcg 22846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 46429 - 46170
Alignment:
Q  10 gtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaa-ttaaatctaatacccaccc-catttaaataaaaaatatatatg 107  Q
    |||||||||| ||||| ||||||| ||| ||||||  | ||||||| ||| ||||| |||| |||||||||||| | || |||||||||||| | | |||    
T  46429 gtgcaaggtgctcaaccaggccggaccttcaaatgccatgggcctcaaacaaaaaaattaagtctaatacccacacacacttaaataaaaaaaaaa-atg 46331  T
Q  108 ttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaattt 207  Q
    |||||||||||| ||||||  |||||| ||||| |||   ||||||||||||||||  ||||| || ||| ||| |||||||||||| ||||| ||||||    
T  46330 ttatatcattttatttcttcggtacacatttgaatttttttctagactctagttctcatttttatacatatatctgatcctatcaaaccacccataattt 46231  T
Q  208 gtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaacaatcat 267  Q
    | |||||||||||||||||||||||| ||  ||| |||||||||| |||||||||||||||    
T  46230 ggataatcacttaatcagtcaatttggaagtctatttcattgaaataatcacaacaatcat 46170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 216
Target Start/End: Original strand, 979 - 1088
Alignment:
Q  107 gttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatt 206  Q
    |||||||| |||| |||||||| |||| ||||||||||   |||||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||    
T  979 gttatatccttttatttctttattacatgtttgagtttttttctagactctagttctcctttttgtgcataaatcggatcctatcaaaccacccctaatt 1078  T
Q  207 tgtataatca 216  Q
    ||||||||||    
T  1079 tgtataatca 1088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 1086 - 1128
Alignment:
Q  226 tcaatttgaaaagctatt-cattgaaagaatcacaacaatcat 267  Q
    |||||||| ||||||||| ||||||||||||||||||||||||    
T  1086 tcaatttggaaagctatttcattgaaagaatcacaacaatcat 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 260
Target Start/End: Complemental strand, 8473 - 8399
Alignment:
Q  187 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcacaa 260  Q
    |||||||| ||||| ||||||||||||||| |||||||||||||||  ||| ||| |||||||||||||||||||    
T  8473 ctatcaaaccacccataatttgtataatcaattaatcagtcaatttcgaaaactatttcattgaaagaatcacaa 8399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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