View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7083_high_6 (Length: 285)
Name: NF7083_high_6
Description: NF7083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7083_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 24 - 239
Target Start/End: Original strand, 19089462 - 19089677
Alignment:
| Q |
24 |
agtaagttctataggtttgaattaagtctaactcaaactctaagatggtggtaaagactatccattcttcgttggatcatttcctataagaccacatggt |
123 |
Q |
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| T |
19089462 |
agtaagttctataggtttgaattaagtctaactcaaactctaagatggtggtaaagactatccattcttcattggatcatttcctataagaccatatggg |
19089561 |
T |
|
| Q |
124 |
tcattcttttagatttacaactctcgttcctaatgaagtgtgtcctgcatgagagtggtgtgttgagagtctcacgttagatgagacatattttgagcaa |
223 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19089562 |
tcattcttttagatttacaactcttgttcctaatgaagtgtgttctgcatgagagtggtgtgttgagagtctcacgttagatgagacatattttgagcaa |
19089661 |
T |
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| Q |
224 |
ttctttacacttgaga |
239 |
Q |
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|||||||||||||||| |
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| T |
19089662 |
ttctttacacttgaga |
19089677 |
T |
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