View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7083_low_13 (Length: 213)
Name: NF7083_low_13
Description: NF7083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7083_low_13 |
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Alignment Details
Target: chr3 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 45437051 - 45436868
Alignment:
| Q |
15 |
aagaaaaaagacacctaagtaaaaaa-taacacttatgctcatgcacacatattataacgaaggtttgatatcattctctctcaatcacac--caaaatg |
111 |
Q |
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| T |
45437051 |
aagaaaaaagacacctaagtaaaaaaataacacttatgctcatgcacacatattataacgaaggtttgatatcattctctctcaatcacacaccaaaatg |
45436952 |
T |
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| Q |
112 |
attgtattaggttattttactataaatgaaggaaagaaaataataattttattaaattaaattgattaattactagttgagttt |
195 |
Q |
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| T |
45436951 |
attgtattaggttattttactataaatgaaggaaagaaaataataattttattaaattaaattgattaattactagttgagttt |
45436868 |
T |
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