View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7083_low_6 (Length: 395)
Name: NF7083_low_6
Description: NF7083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7083_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 344; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 15 - 374
Target Start/End: Original strand, 29052770 - 29053129
Alignment:
| Q |
15 |
acatcaccaacatgctgcaacagaaaacggagagaataatgatgaagtatcaggaatggctaaagcatttcacatatcatcaagaacagcttctgctata |
114 |
Q |
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| T |
29052770 |
acatcaccaacatgctgcaacagaaaacggggagaataatgatgaagtatcaggaatggctaaagcatttcacatatcatcaagaacagcttctgctata |
29052869 |
T |
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| Q |
115 |
acaatatgtatagtaatggctgcacttgtttttcctttgtttatgacatctttaggacaaggtttggcattgaagacaaagatgttatcatatggaacac |
214 |
Q |
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| T |
29052870 |
acaatatgtatagtaatggctgcacttgtttttcctttgtttatgacatctttaggacaaggtttggcattgaagacaaagatgttatcatatggaacac |
29052969 |
T |
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| Q |
215 |
ttttgtttggattttacatggcttggaacattggtgctaatgatgttgcaaatgcaatgggaacttctgttggatctggtgcattgtcacttaggcaagc |
314 |
Q |
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| T |
29052970 |
ttttgtttggattttacatggcttggaacattggtgctaatgatgttgcaaatgcaatgggaacttcagttggatctggtgcattgtcacttaggcaagc |
29053069 |
T |
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| Q |
315 |
tgtgttaacagctgcagtgttggagttttctggggcattgttgatgggaactcatgtgac |
374 |
Q |
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|||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
29053070 |
tgtgttgacagctgcagtgttggagttttcaggggcattgttgatgggaactcatgtgac |
29053129 |
T |
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