View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7084_low_12 (Length: 250)
Name: NF7084_low_12
Description: NF7084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7084_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 33998515 - 33998276
Alignment:
| Q |
9 |
gaagaatatgtgtataatttgatttgaaaagtcatgatttgtcaatataagagattgtggtgaattcttgtagcaagttagagtggagtgcatatcgttc |
108 |
Q |
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| T |
33998515 |
gaagaatatgtgtataatttgatttgaaaagtcatgatttgtcaatataagagattgtggtgaattcttgtagcaagttagagtggagtgcatatcgttc |
33998416 |
T |
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| Q |
109 |
acctaattaactcaagattcaatcatagatatagagattattcttgttgagatgccttatttcattggcaccaattggttttactttttctggacagatt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33998415 |
acctaattaactcaagattcaatcatagatatagagatcattcttgttgagatgccttatttcattggcaccaattggttttactttttctggacagatt |
33998316 |
T |
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| Q |
209 |
cacttacaatagtgctattgtgcttcctaacttcatcttg |
248 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
33998315 |
cacttacaatagtgctattgtgcttcctaacttcatcttg |
33998276 |
T |
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