View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7084_low_7 (Length: 281)

Name: NF7084_low_7
Description: NF7084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7084_low_7
NF7084_low_7
[»] chr7 (24 HSPs)
chr7 (7-76)||(45637708-45637777)
chr7 (135-263)||(40382271-40382398)
chr7 (7-74)||(15329271-15329338)
chr7 (7-73)||(15577850-15577916)
chr7 (7-72)||(4974735-4974800)
chr7 (7-72)||(34482835-34482900)
chr7 (7-72)||(42611811-42611876)
chr7 (7-72)||(48880927-48880992)
chr7 (7-72)||(3961979-3962044)
chr7 (7-72)||(25167850-25167915)
chr7 (9-72)||(24394972-24395035)
chr7 (7-73)||(35444557-35444623)
chr7 (7-75)||(37477080-37477148)
chr7 (19-72)||(20010109-20010162)
chr7 (7-68)||(29737143-29737204)
chr7 (7-73)||(18036977-18037043)
chr7 (7-72)||(15238382-15238447)
chr7 (8-69)||(36790467-36790528)
chr7 (7-76)||(42696079-42696148)
chr7 (7-68)||(25167655-25167715)
chr7 (7-68)||(48880726-48880786)
chr7 (7-68)||(15577646-15577706)
chr7 (7-68)||(30848775-30848835)
chr7 (7-68)||(35445603-35445663)
[»] chr3 (40 HSPs)
chr3 (7-75)||(33113790-33113858)
chr3 (7-76)||(3574527-3574596)
chr3 (7-72)||(6041884-6041949)
chr3 (7-74)||(2754715-2754782)
chr3 (8-74)||(11347266-11347332)
chr3 (7-72)||(37217053-37217118)
chr3 (7-74)||(3137414-3137481)
chr3 (7-72)||(3456064-3456129)
chr3 (7-72)||(30385011-30385076)
chr3 (7-72)||(33145713-33145777)
chr3 (7-72)||(48160905-48160970)
chr3 (7-74)||(34482910-34482977)
chr3 (7-74)||(37522051-37522118)
chr3 (18-73)||(42297352-42297407)
chr3 (7-73)||(36865027-36865093)
chr3 (7-72)||(19650900-19650965)
chr3 (7-71)||(9797029-9797093)
chr3 (7-73)||(22426344-22426410)
chr3 (7-72)||(8320584-8320649)
chr3 (42-81)||(47402631-47402670)
chr3 (7-75)||(24343544-24343612)
chr3 (9-73)||(26612784-26612848)
chr3 (7-74)||(33839529-33839596)
chr3 (18-61)||(42921154-42921197)
chr3 (18-72)||(41224233-41224287)
chr3 (7-68)||(3137213-3137273)
chr3 (7-72)||(8362045-8362110)
chr3 (7-68)||(34482687-34482747)
chr3 (7-68)||(40328037-40328098)
chr3 (7-63)||(33839741-33839797)
chr3 (8-60)||(47738117-47738169)
chr3 (35-69)||(40327878-40327912)
chr3 (7-68)||(9796828-9796888)
chr3 (7-68)||(22426144-22426204)
chr3 (7-68)||(30385606-30385666)
chr3 (7-68)||(33114000-33114060)
chr3 (7-68)||(33145918-33145978)
chr3 (7-68)||(36864831-36864892)
chr3 (7-68)||(37522259-37522319)
chr3 (7-60)||(47738317-47738370)
[»] chr8 (44 HSPs)
chr8 (7-74)||(32064743-32064810)
chr8 (7-78)||(42755042-42755113)
chr8 (7-76)||(26042116-26042185)
chr8 (7-72)||(34665382-34665447)
chr8 (8-75)||(15187557-15187624)
chr8 (7-74)||(17841850-17841917)
chr8 (7-74)||(40780129-40780196)
chr8 (7-72)||(20091801-20091866)
chr8 (7-72)||(24211553-24211618)
chr8 (7-72)||(32393858-32393923)
chr8 (7-75)||(7017865-7017933)
chr8 (7-74)||(1645965-1646032)
chr8 (7-74)||(6108233-6108300)
chr8 (7-72)||(35353041-35353106)
chr8 (7-64)||(38016979-38017036)
chr8 (7-71)||(14128865-14128929)
chr8 (7-75)||(37986055-37986123)
chr8 (7-79)||(39772801-39772873)
chr8 (7-74)||(31347782-31347849)
chr8 (7-69)||(8453837-8453899)
chr8 (18-72)||(27835464-27835518)
chr8 (7-72)||(37132658-37132723)
chr8 (18-74)||(24844869-24844925)
chr8 (7-67)||(25581239-25581299)
chr8 (7-71)||(27782117-27782181)
chr8 (7-73)||(41819778-41819844)
chr8 (7-72)||(30835047-30835111)
chr8 (7-62)||(7021988-7022043)
chr8 (7-68)||(1503642-1503702)
chr8 (7-68)||(3890413-3890474)
chr8 (7-68)||(6108032-6108092)
chr8 (7-68)||(17841649-17841709)
chr8 (7-68)||(26041912-26041972)
chr8 (7-68)||(40779928-40779988)
chr8 (7-61)||(35353247-35353300)
chr8 (7-68)||(10044554-10044614)
chr8 (7-68)||(14129065-14129125)
chr8 (7-68)||(20091600-20091660)
chr8 (19-68)||(25581038-25581086)
chr8 (7-68)||(32064952-32065012)
chr8 (7-68)||(34665587-34665647)
chr8 (7-68)||(37985855-37985915)
chr8 (3-68)||(38017135-38017199)
chr8 (28-72)||(30055543-30055587)
[»] chr6 (22 HSPs)
chr6 (7-74)||(28675146-28675213)
chr6 (7-73)||(33695327-33695393)
chr6 (7-73)||(33696695-33696761)
chr6 (7-72)||(25986930-25986995)
chr6 (7-75)||(6127272-6127340)
chr6 (7-74)||(18365573-18365640)
chr6 (7-74)||(18370837-18370904)
chr6 (7-74)||(23291084-23291151)
chr6 (7-72)||(17176021-17176086)
chr6 (7-72)||(17705465-17705530)
chr6 (8-73)||(18889698-18889762)
chr6 (7-72)||(6031741-6031806)
chr6 (7-66)||(11548588-11548647)
chr6 (7-69)||(8515725-8515787)
chr6 (7-61)||(32702216-32702270)
chr6 (7-76)||(2309423-2309492)
chr6 (8-68)||(29693652-29693712)
chr6 (8-68)||(32702412-32702471)
chr6 (7-74)||(9752245-9752311)
chr6 (7-68)||(17705268-17705328)
chr6 (7-68)||(28675354-28675414)
chr6 (7-68)||(34238886-34238946)
[»] chr4 (42 HSPs)
chr4 (7-74)||(10442789-10442856)
chr4 (7-78)||(22199255-22199326)
chr4 (7-78)||(31078819-31078890)
chr4 (7-72)||(49387888-49387953)
chr4 (7-74)||(21802322-21802389)
chr4 (7-74)||(24128237-24128304)
chr4 (9-72)||(36072947-36073010)
chr4 (7-74)||(47290064-47290131)
chr4 (7-77)||(2624832-2624902)
chr4 (7-73)||(33530688-33530754)
chr4 (7-72)||(46441844-46441909)
chr4 (9-73)||(4751445-4751509)
chr4 (7-71)||(7745112-7745176)
chr4 (7-75)||(36073347-36073415)
chr4 (7-74)||(24392665-24392732)
chr4 (7-74)||(44893424-44893491)
chr4 (7-79)||(23964465-23964537)
chr4 (7-74)||(50156578-50156645)
chr4 (7-73)||(53123029-53123096)
chr4 (18-73)||(37934952-37935007)
chr4 (7-73)||(44893213-44893280)
chr4 (7-66)||(42671675-42671734)
chr4 (7-68)||(9089076-9089136)
chr4 (7-44)||(17655458-17655495)
chr4 (7-68)||(25063373-25063434)
chr4 (7-68)||(36073555-36073615)
chr4 (7-68)||(46442050-46442110)
chr4 (7-68)||(53123237-53123297)
chr4 (18-68)||(47290283-47290332)
chr4 (7-40)||(9088902-9088935)
chr4 (7-68)||(10442586-10442646)
chr4 (7-68)||(11314050-11314111)
chr4 (7-68)||(21802119-21802179)
chr4 (7-68)||(31078618-31078678)
chr4 (7-60)||(37219837-37219890)
chr4 (7-60)||(42671874-42671927)
chr4 (7-68)||(44893012-44893072)
chr4 (7-68)||(44893632-44893692)
chr4 (7-60)||(50156386-50156438)
chr4 (8-68)||(24128446-24128505)
chr4 (46-74)||(30563222-30563250)
chr4 (7-59)||(36073743-36073795)
[»] scaffold0178 (1 HSPs)
scaffold0178 (7-72)||(11621-11686)
[»] chr2 (22 HSPs)
chr2 (7-76)||(23268062-23268131)
chr2 (7-74)||(9293576-9293643)
chr2 (7-74)||(31174834-31174901)
chr2 (7-73)||(14941366-14941432)
chr2 (7-73)||(35160756-35160822)
chr2 (7-72)||(21936081-21936146)
chr2 (7-71)||(10661888-10661952)
chr2 (7-78)||(43330906-43330977)
chr2 (7-73)||(7475508-7475574)
chr2 (8-74)||(13354844-13354910)
chr2 (7-74)||(27847630-27847697)
chr2 (7-72)||(9723405-9723470)
chr2 (7-72)||(33380207-33380272)
chr2 (7-60)||(22591494-22591547)
chr2 (7-70)||(21393688-21393751)
chr2 (7-68)||(10662094-10662154)
chr2 (7-68)||(22592918-22592979)
chr2 (7-68)||(33380413-33380473)
chr2 (7-68)||(35160965-35161025)
chr2 (7-68)||(7475307-7475367)
chr2 (7-68)||(9293374-9293434)
chr2 (7-68)||(23267861-23267921)
[»] chr1 (31 HSPs)
chr1 (7-72)||(40214988-40215053)
chr1 (7-74)||(16045798-16045865)
chr1 (7-74)||(25463674-25463741)
chr1 (7-72)||(6883487-6883552)
chr1 (7-72)||(9910293-9910358)
chr1 (7-83)||(19015392-19015469)
chr1 (7-72)||(44094698-44094763)
chr1 (7-74)||(18404440-18404507)
chr1 (7-81)||(25973405-25973478)
chr1 (7-77)||(36966708-36966778)
chr1 (7-72)||(37821834-37821899)
chr1 (7-74)||(3559615-3559682)
chr1 (9-72)||(32000269-32000332)
chr1 (7-74)||(40273700-40273767)
chr1 (7-73)||(41876442-41876508)
chr1 (35-73)||(34519757-34519795)
chr1 (35-73)||(51620979-51621017)
chr1 (7-74)||(27523255-27523324)
chr1 (7-68)||(19015610-19015670)
chr1 (7-68)||(25973613-25973673)
chr1 (7-68)||(37821633-37821693)
chr1 (7-68)||(51737711-51737771)
chr1 (8-72)||(44691030-44691094)
chr1 (18-68)||(6883704-6883753)
chr1 (10-68)||(52064376-52064434)
chr1 (7-60)||(9910098-9910150)
chr1 (7-68)||(20304929-20304989)
chr1 (7-68)||(40215194-40215254)
chr1 (19-68)||(41876241-41876289)
chr1 (7-60)||(44690828-44690881)
chr1 (45-73)||(9389275-9389303)
[»] chr5 (27 HSPs)
chr5 (7-75)||(6043511-6043579)
chr5 (7-74)||(2477634-2477701)
chr5 (7-72)||(4434007-4434072)
chr5 (7-72)||(11361131-11361196)
chr5 (7-76)||(14138664-14138733)
chr5 (9-73)||(3362777-3362841)
chr5 (9-73)||(38899728-38899792)
chr5 (7-74)||(4892200-4892267)
chr5 (7-74)||(8145373-8145440)
chr5 (7-72)||(22913054-22913119)
chr5 (7-72)||(25398238-25398303)
chr5 (7-72)||(33584329-33584394)
chr5 (9-72)||(12850801-12850864)
chr5 (7-72)||(37321793-37321859)
chr5 (7-72)||(3522006-3522071)
chr5 (7-72)||(12614733-12614798)
chr5 (7-72)||(17545685-17545750)
chr5 (18-68)||(27481830-27481880)
chr5 (7-68)||(4892408-4892468)
chr5 (7-60)||(10458409-10458462)
chr5 (7-68)||(33584128-33584188)
chr5 (9-68)||(12851010-12851068)
chr5 (9-68)||(38899524-38899583)
chr5 (7-68)||(3521806-3521866)
chr5 (7-68)||(6043311-6043371)
chr5 (7-68)||(8145579-8145639)
chr5 (46-75)||(31640964-31640993)
[»] scaffold0471 (2 HSPs)
scaffold0471 (7-74)||(12840-12907)
scaffold0471 (8-68)||(13049-13108)
[»] scaffold0096 (1 HSPs)
scaffold0096 (7-74)||(41009-41076)
[»] scaffold0085 (1 HSPs)
scaffold0085 (7-72)||(47850-47915)
[»] scaffold0204 (1 HSPs)
scaffold0204 (7-74)||(4394-4461)
[»] scaffold0665 (1 HSPs)
scaffold0665 (7-76)||(3064-3133)
[»] scaffold0228 (5 HSPs)
scaffold0228 (7-61)||(8413-8467)
scaffold0228 (7-61)||(15995-16049)
scaffold0228 (7-61)||(25947-26001)
scaffold0228 (7-68)||(16190-16250)
scaffold0228 (7-68)||(26142-26202)


Alignment Details
Target: chr7 (Bit Score: 62; Significance: 8e-27; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 45637777 - 45637708
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctcttat 76  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45637777 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcttat 45637708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 263
Target Start/End: Original strand, 40382271 - 40382398
Alignment:
Q  135 gaagcccccattaattaatccaactcaaaaagtaaaattatactagcaatacaatcatcatcnnnnnnnnaaaagaaaagcacaaga-agctgttgataa 233  Q
    |||||||| |||||||||||||||| ||||| |||||||||||||| |||||||||||||||        |||||||||||||||||   | ||||||||    
T  40382271 gaagccccaattaattaatccaactaaaaaa-taaaattatactagaaatacaatcatcatc-tttttttaaaagaaaagcacaagatcaccgttgataa 40382368  T
Q  234 ttaaactagccttaatcacaatgatacatg 263  Q
    ||||||||||||||||||||||||||||||    
T  40382369 ttaaactagccttaatcacaatgatacatg 40382398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 15329338 - 15329271
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15329338 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 15329271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 15577850 - 15577916
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15577850 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 15577916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 4974735 - 4974800
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4974735 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 4974800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 34482900 - 34482835
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34482900 gattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatatatagcattgctc 34482835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 42611876 - 42611811
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42611876 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 42611811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 48880927 - 48880992
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  48880927 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 48880992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 3962044 - 3961979
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  3962044 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 3961979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 25167850 - 25167915
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  25167850 gattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcattgctc 25167915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 24395035 - 24394972
Alignment:
Q  9 ttattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  24395035 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 24394972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 35444623 - 35444557
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||||| |||||||||||||||||    
T  35444623 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcattgctct 35444557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 37477080 - 37477148
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctta 75  Q
    |||||||||| |||||||||||| || ||||||| | ||||||||||||||||||||||||||||||||    
T  37477080 gattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatatatagcattgctctta 37477148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 20010109 - 20010162
Alignment:
Q  19 atgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  20010109 atgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctc 20010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 29737204 - 29737143
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    |||||||||  |||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  29737204 gattattctaccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcatt 29737143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 18037043 - 18036977
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||||| |||||||||||| || ||||||| | |||||||||||||||||||| |||||||||    
T  18037043 gattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatatatatcattgctct 18036977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 15238447 - 15238382
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||||||||| ||||||| | ||| | |||||||||||||||||||||||    
T  15238447 gattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcattgctc 15238382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 36790467 - 36790528
Alignment:
Q  8 attattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattg 69  Q
    ||||||||| |||||||||||| || ||||||| |||||| |||||||||||||||||||||    
T  36790467 attattctgccatgtcattcttaaatttttcttgataaaaactttcttgatatatagcattg 36790528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 42696148 - 42696079
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctcttat 76  Q
    ||||||||||  ||||||||||| |||  || ||||||||||||||||||||||||| ||||||||||||    
T  42696148 gattattctgctatgtcattcttaaaaaatttttaataaaatctttcttgatatataacattgctcttat 42696079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 25167715 - 25167655
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  25167715 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 25167655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 48880786 - 48880726
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  48880786 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 48880726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 15577706 - 15577646
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  15577706 gattattgtgacatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 15577646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 30848775 - 30848835
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||| | |||||||||| |||||||    
T  30848775 gattattgtgccatgtcattcttgaatttttctt-ataaaagcattcttgatatctagcatt 30848835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 35445603 - 35445663
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||| ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  35445603 gattattgtgtcatatcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 35445663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 33113858 - 33113790
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctta 75  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33113858 gattattctgccatgtaattcttgaaattttcttaataaaatctttcttgatatatagcattgctctta 33113790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 3574527 - 3574596
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctcttat 76  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  3574527 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcttat 3574596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 6041949 - 6041884
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6041949 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 6041884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 2754782 - 2754715
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  2754782 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 2754715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 11347332 - 11347266
Alignment:
Q  8 attattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    ||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  11347332 attattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 11347266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 37217053 - 37217118
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  37217053 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 37217118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 3137414 - 3137481
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    ||||||| || ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  3137414 gattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 3137481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 3456129 - 3456064
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||| |||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  3456129 gattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 3456064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 30385076 - 30385011
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||    
T  30385076 gattattctgccatgtcatttttgaaattttcttgataaaatctttcttgataaatagcattgctc 30385011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 33145777 - 33145713
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  33145777 gattattctgccatgtcattcttaaaatttt-ttaataaaatctttcttgatatatagcattgctc 33145713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 48160970 - 48160905
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||| |||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  48160970 gattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 48160905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 34482910 - 34482977
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||  ||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  34482910 gattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 34482977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 37522118 - 37522051
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| |||||||||||| |||||||||| | ||||||||||||||||||||| |||||||||    
T  37522118 gattattctgtcatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagtattgctctt 37522051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 42297407 - 42297352
Alignment:
Q  18 catgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  42297407 catgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 42297352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 36865027 - 36865093
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||||  |||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||    
T  36865027 gattattctaccatgtcattcttaaaattttcttaataaaatcttccttaatatatagcattgctct 36865093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 19650900 - 19650965
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||| ||||||| ||||||||    
T  19650900 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatatataacattgctc 19650965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 9797029 - 9797093
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgct 71  Q
    |||||||||| ||||||||||||||| ||||||| | |||||||||||||||||||| |||||||    
T  9797029 gattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatataacattgct 9797093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 22426344 - 22426410
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||||| ||||||||| || |||||||||| |||||||||||||| ||||||| |||||||||    
T  22426344 gattattctgccatgtcatttttaaaattttcttgataaaatctttcttaatatataacattgctct 22426410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 8320584 - 8320649
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    ||||||| || ||| |||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  8320584 gattattttgccatatcattcttaaaattttcttgataaaatctttcttgatatataacattgctc 8320649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 47402631 - 47402670
Alignment:
Q  42 ataaaatctttcttgatatatagcattgctcttatattat 81  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  47402631 ataaaatctttcttgatatatagcattgctcttatattat 47402670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 24343612 - 24343544
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctta 75  Q
    |||||||||| ||| | | | ||||| ||||||| |||||||||||||| |||||||||||||||||||    
T  24343612 gattattctgccatattaattttgaatttttcttgataaaatctttcttaatatatagcattgctctta 24343544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 26612848 - 26612784
Alignment:
Q  9 ttattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||| ||||||||||||||| |||| || ||||||||||| ||||||||||  ||||||||    
T  26612848 ttattctgccatgtcattcttgaatttttttttataaaatcttttttgatatataatattgctct 26612784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 33839596 - 33839529
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| ||||| |||||| || |||| || |||||||||||||| ||||||| ||||||||||    
T  33839596 gattattctgtcatgttattcttaaattttttttgataaaatctttcttaatatataacattgctctt 33839529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 42921197 - 42921154
Alignment:
Q  18 catgtcattcttgaaattttcttaataaaatctttcttgatata 61  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  42921197 catgtcattcttaaaattttcttgataaaatctttcttgatata 42921154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 41224287 - 41224233
Alignment:
Q  18 catgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    ||||||||||||||| ||||||| | |||||||||||| |||||||||| |||||    
T  41224287 catgtcattcttgaatttttcttgagaaaatctttcttaatatatagcagtgctc 41224233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 3137273 - 3137213
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  3137273 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 3137213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 8362045 - 8362110
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||||||||| ||||||| | |   | |||||||||||||||||||||||    
T  8362045 gattattctgccatgtcattcttgaatttttcttgaaattttttttcttgatatatagcattgctc 8362110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 34482747 - 34482687
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  34482747 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 34482687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 40328037 - 40328098
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  40328037 gattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 40328098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 33839741 - 33839797
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatata 63  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||||||    
T  33839741 gattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatata 33839797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 47738169 - 47738117
Alignment:
Q  8 attattctgacatgtcattcttgaaattttcttaataaaatctttcttgatat 60  Q
    ||||||||| ||| |||||||||||  |||||| |||||||||||||||||||    
T  47738169 attattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 69
Target Start/End: Complemental strand, 40327912 - 40327878
Alignment:
Q  35 tttcttaataaaatctttcttgatatatagcattg 69  Q
    |||||| ||||||||||||||||||||||||||||    
T  40327912 tttcttgataaaatctttcttgatatatagcattg 40327878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 9796888 - 9796828
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| ||||||||||||||||||  |||||| || ||||| |||||||||| |||||||    
T  9796888 gattattgtgacatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcatt 9796828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 22426204 - 22426144
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  22426204 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 22426144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 30385606 - 30385666
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  30385606 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatttagcatt 30385666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 33114000 - 33114060
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  33114000 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 33114060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 33145918 - 33145978
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  33145918 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 33145978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 36864892 - 36864831
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  ||| || |||||||| |||||||||| |||||||    
T  36864892 gattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctagcatt 36864831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 37522259 - 37522319
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  37522259 gattattatgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 37522319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 47738317 - 47738370
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatat 60  Q
    ||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  47738317 gattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatat 47738370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 32064810 - 32064743
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32064810 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 32064743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 42755042 - 42755113
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctcttatat 78  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  42755042 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatatcattgctcttatat 42755113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 26042116 - 26042185
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctcttat 76  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  26042116 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcattgctcttat 26042185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 34665447 - 34665382
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34665447 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 34665382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 15187624 - 15187557
Alignment:
Q  8 attattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctta 75  Q
    ||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15187624 attattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctta 15187557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 17841850 - 17841917
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  17841850 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 17841917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 40780129 - 40780196
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  40780129 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 40780196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 20091801 - 20091866
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  20091801 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctc 20091866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 24211553 - 24211618
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24211553 gattattctgccatgccattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 24211618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 32393923 - 32393858
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  32393923 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 32393858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 7017865 - 7017933
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctta 75  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  7017865 gattattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatatatagcattgctctta 7017933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 1645965 - 1646032
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| |||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  1645965 gattattctgccatgtctttcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 1646032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 6108233 - 6108300
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||    
T  6108233 gattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatataacattgctctt 6108300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 35353106 - 35353041
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| |||||||||||| |||||||||| | |||||||||||||||||||||||||||||    
T  35353106 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 35353041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 38017036 - 38016979
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatag 64  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  38017036 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatag 38016979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 14128929 - 14128865
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgct 71  Q
    |||||||||| |||||||||||| ||||||| || ||||||||||||||||||||||||||||||    
T  14128929 gattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcattgct 14128865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 37986055 - 37986123
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctta 75  Q
    |||||||||| |||||||||||| ||||||| || ||||||||||||||||||||||||||| ||||||    
T  37986055 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcattactctta 37986123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 39772801 - 39772873
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctcttatatt 79  Q
    |||||||||| |||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| ||||    
T  39772801 gattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatatataacattgctcttttatt 39772873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 31347782 - 31347849
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| ||||||||||||||| ||||||| | ||||| |||||||||||||||||||||||||    
T  31347782 gattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcattgctctt 31347849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 8453899 - 8453837
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattg 69  Q
    ||||||| || ||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  8453899 gattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattg 8453837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 27835464 - 27835518
Alignment:
Q  18 catgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    ||||||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  27835464 catgtcattcttgaatttttcttaataagatctttattgatatatagcattgctc 27835518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 37132658 - 37132723
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| |||||||||||| || ||||||| ||||||| ||| |||||||||||||||||||    
T  37132658 gattattctgccatgtcattcttaaatttttcttgataaaatattttttgatatatagcattgctc 37132723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 24844869 - 24844925
Alignment:
Q  18 catgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| ||||||| |||||    
T  24844869 catgtcattcttgaatttttcttaataaaatatttcttgatatgtagcatttctctt 24844925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 25581239 - 25581299
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcat 67  Q
    ||||||| || |||||||||||||||||||||||  ||||| |||||||||||||||||||    
T  25581239 gattattttgccatgtcattcttgaaattttcttcgtaaaaactttcttgatatatagcat 25581299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 27782117 - 27782181
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgct 71  Q
    |||||||||| ||||||||| |||||  |||||| ||||||| ||||||||||||||||||||||    
T  27782117 gattattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcattgct 27782181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 41819778 - 41819844
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||||| ||| |||||||| |||  ||||| |||||||||||||||||||||| |||||||||    
T  41819778 gattattctgccatatcattcttaaaacattcttgataaaatctttcttgatatataacattgctct 41819844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 30835047 - 30835111
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||||||||| |||| |  |||||||||||||||||||||| ||||||||    
T  30835047 gattattctgccatgtcattcttgaattttt-tcgataaaatctttcttgatatataacattgctc 30835111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 7022043 - 7021988
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatat 62  Q
    |||||||||| ||| ||||||||||| ||||||| | |||||||||||||||||||    
T  7022043 gattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatatat 7021988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 1503702 - 1503642
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  1503702 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 1503642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 3890474 - 3890413
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    |||||||||| ||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  3890474 gattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcatt 3890413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 6108092 - 6108032
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  6108092 gattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 6108032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 17841709 - 17841649
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  17841709 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 17841649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 26041972 - 26041912
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  26041972 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 26041912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 40779988 - 40779928
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  40779988 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 40779928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 35353247 - 35353300
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatata 61  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||||    
T  35353247 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatata 35353300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 10044554 - 10044614
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  10044554 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 10044614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 14129065 - 14129125
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  14129065 gattattgtgccatgtcattcttgaatatttctt-ataaaatcattcttgatatctagcatt 14129125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 20091660 - 20091600
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  20091660 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 20091600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 25581086 - 25581038
Alignment:
Q  19 atgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  25581086 atgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 25581038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 32064952 - 32065012
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  32064952 gattattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 32065012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 34665587 - 34665647
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  34665587 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 34665647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 37985915 - 37985855
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  37985915 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 37985855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 38017135 - 38017199
Alignment:
Q  3 ggtagattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    |||| |||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  38017135 ggtaaattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 38017199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 30055587 - 30055543
Alignment:
Q  28 ttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| || |||||||||| |||| |||||||||||||||    
T  30055587 ttgaaatttttttgataaaatcttccttggtatatagcattgctc 30055543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 28675213 - 28675146
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28675213 gattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 28675146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 33695327 - 33695393
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33695327 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 33695393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 33696761 - 33696695
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33696761 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 33696695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 25986995 - 25986930
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25986995 gattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 25986930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 6127340 - 6127272
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctta 75  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  6127340 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctta 6127272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 18365573 - 18365640
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  18365573 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctctt 18365640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 18370837 - 18370904
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  18370837 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctctt 18370904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 23291084 - 23291151
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  23291084 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 23291151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 17176021 - 17176086
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  17176021 gattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcattgctc 17176086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 17705465 - 17705530
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  17705465 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 17705530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 18889698 - 18889762
Alignment:
Q  8 attattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    ||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  18889698 attattctgccatgtcattcttgaaattttcttgat-aaatctttcttgatatatagcattgctct 18889762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 6031741 - 6031806
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| |||||||||||| ||||||| || || ||||||||||||||||||||||||||||    
T  6031741 gattattctgtcatgtcattcttaaaattttattgatgaaatctttcttgatatatagcattgctc 6031806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 11548588 - 11548647
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagca 66  Q
    |||||||||| ||||||||||||||| ||||||| | ||||| |||||||||||||||||    
T  11548588 gattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatatatagca 11548647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 8515725 - 8515787
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattg 69  Q
    |||||||||| |||||||||||| ||  | |||| ||||||||||||||||||||||||||||    
T  8515725 gattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatatatagcattg 8515787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 32702270 - 32702216
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatata 61  Q
    |||||||||| ||| ||||||||||||||||| | | ||||||||||||||||||    
T  32702270 gattattctgccatatcattcttgaaattttcatgaaaaaatctttcttgatata 32702216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 2309423 - 2309492
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctcttat 76  Q
    |||||||||| |||| ||||||| |||   | || |||||||||||||||||||||| ||||||||||||    
T  2309423 gattattctgccatgccattcttaaaaaaattttgataaaatctttcttgatatataacattgctcttat 2309492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 29693652 - 29693712
Alignment:
Q  8 attattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||||| |||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  29693652 attattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatt 29693712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 32702412 - 32702471
Alignment:
Q  8 attattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    |||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  32702412 attattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 32702471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 9752245 - 9752311
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| ||| ||||||||||| ||||||| || || | |||||||||||||| ||||||||||    
T  9752245 gattattctgccatatcattcttgaatttttcttgat-aattttttcttgatatataacattgctctt 9752311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 17705328 - 17705268
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  17705328 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 17705268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 28675354 - 28675414
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  28675354 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 28675414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 34238946 - 34238886
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||| ||| ||||| |||||||| |||||||||| |||||||    
T  34238946 gattattgtgtcatgtcattcttg-aatcttcttgataaaatcattcttgatatctagcatt 34238886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 10442789 - 10442856
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10442789 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctt 10442856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 22199326 - 22199255
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctcttatat 78  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  22199326 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcatatat 22199255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 31078819 - 31078890
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctcttatat 78  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  31078819 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctaatat 31078890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 49387888 - 49387953
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  49387888 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 49387953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 21802322 - 21802389
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  21802322 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctctt 21802389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 24128304 - 24128237
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  24128304 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 24128237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 36073010 - 36072947
Alignment:
Q  9 ttattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  36073010 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 36072947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 47290131 - 47290064
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  47290131 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 47290064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 2624902 - 2624832
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctcttata 77  Q
    |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  2624902 gattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcatata 2624832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 33530688 - 33530754
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  33530688 gattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcattgctct 33530754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 46441909 - 46441844
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    ||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46441909 gattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcattgctc 46441844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 4751509 - 4751445
Alignment:
Q  9 ttattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  4751509 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 4751445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 7745112 - 7745176
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgct 71  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  7745112 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 7745176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 36073415 - 36073347
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctta 75  Q
    |||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||    
T  36073415 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattcctctta 36073347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 24392732 - 24392665
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| ||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||    
T  24392732 gattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcattgctctt 24392665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 44893491 - 44893424
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| |||||||||||||||||||| || | |||||||||||||||||||||||||||||||    
T  44893491 gattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcattgctctt 44893424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 23964465 - 23964537
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctcttatatt 79  Q
    |||||||||| |||||||||||| ||||||| || |||||||||||||||||||||| |||||||||| ||||    
T  23964465 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatataacattgctcttttatt 23964537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 50156578 - 50156645
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| |||||||||||| |||||||||| | |||||||||||| ||||||||||||||||||    
T  50156578 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatatatagcattgctctt 50156645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 53123096 - 53123029
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttctta-ataaaatctttcttgatatatagcattgctct 73  Q
    |||||||||| |||||||||||||||||||||||  | ||||||||||||||||||||||||||||||    
T  53123096 gattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcattgctct 53123029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 37934952 - 37935007
Alignment:
Q  18 catgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||||||||| ||||| || ||||||||||| ||||||||||||||||||||    
T  37934952 catgtcattcttgacatttttttgataaaatcttttttgatatatagcattgctct 37935007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 44893213 - 44893280
Alignment:
Q  7 gattattctgacatgtcattcttgaaa-ttttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||||| |||||||||||||||| |||| || | |||||||||||| |||||||||||||||||    
T  44893213 gattattctgccatgtcattcttgaaattttttttgaaaaaatctttcttaatatatagcattgctct 44893280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 42671734 - 42671675
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagca 66  Q
    |||||||||| |||||||||||| || |||| || ||||||||||| |||||||||||||    
T  42671734 gattattctgccatgtcattcttaaattttttttgataaaatctttattgatatatagca 42671675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 9089076 - 9089136
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  9089076 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 9089136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 17655495 - 17655458
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaata 44  Q
    |||||||||| |||||||||||||||||||||||||||    
T  17655495 gattattctgccatgtcattcttgaaattttcttaata 17655458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 25063434 - 25063373
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    |||||||||  |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  25063434 gattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 25063373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 36073555 - 36073615
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  36073555 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 36073615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 46442050 - 46442110
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  46442050 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 46442110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 53123237 - 53123297
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  53123237 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 53123297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 47290283 - 47290332
Alignment:
Q  18 catgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  47290283 catgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 47290332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 9088935 - 9088902
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttctt 40  Q
    |||||||||| |||||||||||||||||||||||    
T  9088935 gattattctgccatgtcattcttgaaattttctt 9088902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 10442646 - 10442586
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  10442646 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 10442586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 11314111 - 11314050
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  11314111 gattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcatt 11314050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 21802179 - 21802119
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  21802179 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 21802119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 31078678 - 31078618
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||| |||||| || |||||||| |||||||||| |||||||    
T  31078678 gattattgtgccatgtcattcttg-aattttttttataaaatcattcttgatatctagcatt 31078618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 37219837 - 37219890
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatat 60  Q
    |||||||||| |||||||||||| ||  |||||| |||||||| ||||||||||    
T  37219837 gattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatat 37219890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 42671874 - 42671927
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatat 60  Q
    ||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  42671874 gattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 42671927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 44893072 - 44893012
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  44893072 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 44893012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 44893632 - 44893692
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  44893632 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 44893692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 50156438 - 50156386
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatat 60  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| ||||||||||    
T  50156438 gattattatgtcatgtcattcttgaatttttctt-ataaaatcattcttgatat 50156386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 24128446 - 24128505
Alignment:
Q  8 attattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    |||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  24128446 attattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 24128505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 74
Target Start/End: Complemental strand, 30563250 - 30563222
Alignment:
Q  46 aatctttcttgatatatagcattgctctt 74  Q
    |||||||||||||||||||||||||||||    
T  30563250 aatctttcttgatatatagcattgctctt 30563222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 36073743 - 36073795
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgata 59  Q
    ||||||| || |||||||||||| ||  |||||| ||||||||||||||||||    
T  36073743 gattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 11686 - 11621
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11686 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 11621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 23268062 - 23268131
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctcttat 76  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  23268062 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctcttat 23268131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 9293576 - 9293643
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  9293576 gattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcattgctctt 9293643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 31174834 - 31174901
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  31174834 gattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatatataacattgttctt 31174901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 14941366 - 14941432
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  14941366 gattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcattgctct 14941432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 35160822 - 35160756
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  35160822 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 35160756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 21936146 - 21936081
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21936146 gattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 21936081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 10661952 - 10661888
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgct 71  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  10661952 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 10661888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 43330977 - 43330906
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctcttatat 78  Q
    |||||||||| ||||||||||||||| |||| || | |||||||||||||||||||||||||||||||||||    
T  43330977 gattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcattgctcttatat 43330906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 7475508 - 7475574
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||||  ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  7475508 gattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctct 7475574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 13354910 - 13354844
Alignment:
Q  8 attattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  13354910 attattctgccatatcattcttgaaattttcttgataaaatctttcttgatatataacattgctctt 13354844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 27847697 - 27847630
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| |||||||||||||||  ||||||||||||||||||||| ||||| ||||||||||||    
T  27847697 gattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatatacagcattgctctt 27847630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 9723470 - 9723405
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| |||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||    
T  9723470 gattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcattgctc 9723405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 33380272 - 33380207
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||| | |||||||||||| |||||||||| | |||||||||||||||||||||||||||||    
T  33380272 gattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 33380207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 22591547 - 22591494
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatat 60  Q
    |||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||    
T  22591547 gattattctgccatatcattcttgaattttttttaataaaatctttcttgatat 22591494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 21393688 - 21393751
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgc 70  Q
    |||||||||  |||||||||||| || ||||||| | ||||| |||||||||||||||||||||    
T  21393688 gattattctaccatgtcattcttaaatttttcttgagaaaatttttcttgatatatagcattgc 21393751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 10662094 - 10662154
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  10662094 gattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 10662154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 22592918 - 22592979
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  22592918 gattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 33380413 - 33380473
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  33380413 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 33380473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 35160965 - 35161025
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  35160965 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 35161025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 7475367 - 7475307
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||| ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  7475367 gattattatgtcatatcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 7475307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 9293434 - 9293374
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  9293434 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 9293374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 23267921 - 23267861
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  23267921 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 23267861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 40215053 - 40214988
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40215053 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 40214988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 16045798 - 16045865
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  16045798 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattactctt 16045865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 25463741 - 25463674
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  25463741 gattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcattgctctt 25463674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 6883552 - 6883487
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  6883552 gattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcattgctc 6883487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 9910293 - 9910358
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  9910293 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 9910358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 19015469 - 19015392
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt-atattatta 83  Q
    |||||||||| ||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||    
T  19015469 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctcttaatattatta 19015392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 44094763 - 44094698
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  44094763 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctc 44094698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 18404507 - 18404440
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||  |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  18404507 gattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 18404440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 25973478 - 25973405
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctcttatattat 81  Q
    |||||||||| | ||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||    
T  25973478 gattattctgcc-tgtcattcttgaaattttcatgataaaatctttcttgatatataacattgctcttatattat 25973405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 36966708 - 36966778
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctcttata 77  Q
    |||||||||| ||| ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||    
T  36966708 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctcatata 36966778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 37821834 - 37821899
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||| ||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  37821834 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 37821899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 3559682 - 3559615
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| |||||||||||| ||||||| || |||||||||||||||||||||||||||| ||||    
T  3559682 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcattgttctt 3559615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 32000269 - 32000332
Alignment:
Q  9 ttattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||| ||||||||||||||| ||||||| | |||||||||||||||||||||||||||||    
T  32000269 ttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcattgctc 32000332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 40273767 - 40273700
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    ||||||| |||||||||||||||||| ||||||| | ||||||||||||||||| |||||||||||||    
T  40273767 gattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcattgctctt 40273700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 41876442 - 41876508
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||||| |||||||||||| ||||||| || | ||||||||||||||||||||||||||||||    
T  41876442 gattattctgccatgtcattcttaaaatttttttgaaaaaatctttcttgatatatagcattgctct 41876508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 34519795 - 34519757
Alignment:
Q  35 tttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34519795 tttcttaataaaatctttcttgatatatagcattgctct 34519757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 51621017 - 51620979
Alignment:
Q  35 tttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51621017 tttcttaataaaatctttcttgatatatagcattgctct 51620979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 27523255 - 27523324
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttga--tatatagcattgctctt 74  Q
    |||||||||| |||||||||||| || ||||||| |||||||  |||||||  |||||||||||||||||    
T  27523255 gattattctgtcatgtcattcttaaatttttcttgataaaattgttcttgatgtatatagcattgctctt 27523324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 19015610 - 19015670
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  19015610 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatgtagcatt 19015670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 25973613 - 25973673
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  25973613 gattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 25973673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 37821693 - 37821633
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  37821693 gattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 37821633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 51737711 - 51737771
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  51737711 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 51737771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 44691030 - 44691094
Alignment:
Q  8 attattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    ||||||||| ||||| |||||||||  ||| || |||||||||||||||||||| | ||||||||    
T  44691030 attattctgccatgtaattcttgaatctttttttataaaatctttcttgatatacaacattgctc 44691094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 6883704 - 6883753
Alignment:
Q  18 catgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  6883704 catgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 6883753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 52064434 - 52064376
Alignment:
Q  10 tattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| |||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  52064434 tattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcatt 52064376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 9910150 - 9910098
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatat 60  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| ||||||||||    
T  9910150 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 9910098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 20304989 - 20304929
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  20304989 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 20304929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 40215194 - 40215254
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  40215194 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 40215254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 41876289 - 41876241
Alignment:
Q  19 atgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  41876289 atgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 41876241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 44690881 - 44690828
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatat 60  Q
    |||||||||| |||||||||||||||  |||||| |||||||| || |||||||    
T  44690881 gattattctgccatgtcattcttgaatctttcttgataaaatcattattgatat 44690828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 73
Target Start/End: Original strand, 9389275 - 9389303
Alignment:
Q  45 aaatctttcttgatatatagcattgctct 73  Q
    |||||||||||||||||||||||||||||    
T  9389275 aaatctttcttgatatatagcattgctct 9389303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 7e-24; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 6043511 - 6043579
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctta 75  Q
    |||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6043511 gattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctta 6043579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 2477701 - 2477634
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  2477701 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctt 2477634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 4434007 - 4434072
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4434007 gattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcattgctc 4434072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 11361131 - 11361196
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  11361131 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 11361196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 14138733 - 14138664
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctcttat 76  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  14138733 gattattctgccatgtaattcttgaaattttcttgataaaatctttcttgatatataacattgctcttat 14138664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 3362841 - 3362777
Alignment:
Q  9 ttattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  3362841 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 3362777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 38899728 - 38899792
Alignment:
Q  9 ttattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 73  Q
    |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  38899728 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 38899792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 4892267 - 4892200
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| |||||||||||| |||||||||| | |||||||||||||||||||||||||||||||    
T  4892267 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctctt 4892200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 8145440 - 8145373
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||    
T  8145440 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattcctctt 8145373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 22913054 - 22913119
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||||||||| ||||||| | |||||||||||||||||||||||||||||    
T  22913054 gattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcattgctc 22913119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 25398303 - 25398238
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| |||||||||||| |||||||||| | |||||||||||||||||||||||||||||    
T  25398303 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 25398238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 33584329 - 33584394
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| |||||||||||| |||||||||| | |||||||||||||||||||||||||||||    
T  33584329 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 33584394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 12850864 - 12850801
Alignment:
Q  9 ttattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||| ||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  12850864 ttattctgccatgtcatttttggaattttcttgataaaatctttcttgatatatagcattgctc 12850801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 37321793 - 37321859
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttctt-gatatatagcattgctc 72  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||    
T  37321793 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttagatatatagcattgctc 37321859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 3522006 - 3522071
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||| ||||||||||||| | |||||||||||||||||||| ||||||||    
T  3522006 gattattctgccatgtcatttttgaaattttcttgaaaaaatctttcttgatatataacattgctc 3522071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 12614733 - 12614798
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    ||||||| || |||||||||||||||  |||||| ||||||| |||||||||||||||||||||||    
T  12614733 gattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcattgctc 12614798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 17545685 - 17545750
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||||||||| ||||||| | ||| | |||||||||||||||||||||||    
T  17545685 gattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcattgctc 17545750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 27481880 - 27481830
Alignment:
Q  18 catgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||||||||||| ||||||| |||||||||||||| ||| ||||||||    
T  27481880 catgtcattcttgaatttttcttgataaaatctttcttaatacatagcatt 27481830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 4892408 - 4892468
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  4892408 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 4892468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 10458462 - 10458409
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatat 60  Q
    ||||||| || ||||||||||||||| ||||||| ||||||| |||||||||||    
T  10458462 gattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

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Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 33584188 - 33584128
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  33584188 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 33584128  T

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Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 12851010 - 12851068
Alignment:
Q  9 ttattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  12851010 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 12851068  T

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Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 38899583 - 38899524
Alignment:
Q  9 ttattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||| || ||||||||||||||| |||| || |||||||| |||||||||| |||||||    
T  38899583 ttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcatt 38899524  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 3521866 - 3521806
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  3521866 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 3521806  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 6043371 - 6043311
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  6043371 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 6043311  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 8145579 - 8145639
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  8145579 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 8145639  T

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Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 75
Target Start/End: Original strand, 31640964 - 31640993
Alignment:
Q  46 aatctttcttgatatatagcattgctctta 75  Q
    ||||||||||||||||||||||||||||||    
T  31640964 aatctttcttgatatatagcattgctctta 31640993  T

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Target: scaffold0471 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 12907 - 12840
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  12907 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctctt 12840  T

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Target: scaffold0471; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 13049 - 13108
Alignment:
Q  8 attattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    |||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  13049 attattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 13108  T

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Target: scaffold0096 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 41076 - 41009
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  41076 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctctt 41009  T

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Target: scaffold0085 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 47915 - 47850
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 72  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  47915 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcattgctc 47850  T

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Target: scaffold0204 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 4461 - 4394
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctctt 74  Q
    |||||||||| |||||||||||| |||||||||| | |||||||||||||||||||||||||||||||    
T  4461 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctctt 4394  T

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Target: scaffold0665 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 3133 - 3064
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctcttat 76  Q
    |||||||||| |||||||||||| ||||||| || |||||||||||||||||||||||||||||| ||||    
T  3133 gattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcattgctgttat 3064  T

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Target: scaffold0228 (Bit Score: 47; Significance: 7e-18; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 8467 - 8413
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatata 61  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  8467 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 8413  T

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Target: scaffold0228; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 16049 - 15995
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatata 61  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  16049 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 15995  T

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Target: scaffold0228; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 26001 - 25947
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatata 61  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  26001 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 25947  T

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Target: scaffold0228; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 16190 - 16250
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  16190 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 16250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 26142 - 26202
Alignment:
Q  7 gattattctgacatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 68  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  26142 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 26202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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