View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7088_high_17 (Length: 281)
Name: NF7088_high_17
Description: NF7088
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7088_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 32936554 - 32936290
Alignment:
| Q |
1 |
atccaaccttacaatgtaacctcgatacaacttcaatcgatataagataaagaattaacctaatattgatagcgttctccatttgaaaaacatgcctaac |
100 |
Q |
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| T |
32936554 |
atccaaccttacaatgtaacctcgatacaacttcaatcgatataagataaagaattaacctaatattgatagcgttctccatttgaaaaacatgcctaac |
32936455 |
T |
|
| Q |
101 |
aaataagccagcatgatcccaattgtaactgatagctacaagaaaacaacataaaaaatattcgtatcaaattaatgagaataataataaaaatgaacgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32936454 |
aaataagccagcatgatcccaattgtaactgatagctacaagaaaacaacataaaaaatattcgtatcaaattaatgagaataataataaaaatgaacgc |
32936355 |
T |
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| Q |
201 |
atgtgatgtaattctctgtttcaaagcaacataaagccaacctggttcacagatcctaggctacc |
265 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
32936354 |
atgtgatgtaattctctgtttcaaagcaacataaaaccaacctggttcacagatcctaggctacc |
32936290 |
T |
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