View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7088_high_25 (Length: 237)
Name: NF7088_high_25
Description: NF7088
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7088_high_25 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 36335365 - 36335129
Alignment:
| Q |
1 |
tggcagcggtactagtaataatcaattggagaagtgtccactatgtgatgctaagttttcctcagccgctagtttggtggatcatgcnnnnnnngttcac |
100 |
Q |
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| T |
36335365 |
tggcagcggtactagtaataatcaactggagaagtgtccactatgtgatgctaagttttcctcagccgctagtttggtggatcatgcaaaaaaagttcac |
36335266 |
T |
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| Q |
101 |
caaaggagtggtggcaaccaatatggggcaaagaaggtgtcaatttctgcatgccccaagtgcagtaaaggttttttggacccagtttcccttgtagagc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36335265 |
caaaggagtggtggcaaccaatatggggcaaagaaggtgtcaatttctgcatgccccaagtgcagtaaaggttttttggacccagtttcccttgtagagc |
36335166 |
T |
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| Q |
201 |
atgttgagagggatcatggtggttgctcttgaatatt |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
36335165 |
atgttgagagggatcatggtggttgctcttgaatatt |
36335129 |
T |
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