View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7088_low_19 (Length: 292)

Name: NF7088_low_19
Description: NF7088
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7088_low_19
NF7088_low_19
[»] chr7 (75 HSPs)
chr7 (1-199)||(23101294-23101492)
chr7 (1-199)||(28342343-28342541)
chr7 (1-199)||(29614770-29614968)
chr7 (1-199)||(39784095-39784293)
chr7 (1-205)||(43581090-43581294)
chr7 (1-199)||(3022922-3023120)
chr7 (1-206)||(10068462-10068668)
chr7 (1-206)||(40996648-40996853)
chr7 (1-199)||(9882243-9882440)
chr7 (1-199)||(18838385-18838583)
chr7 (1-206)||(973187-973392)
chr7 (1-206)||(30440799-30441004)
chr7 (1-206)||(47914269-47914474)
chr7 (1-196)||(33382633-33382828)
chr7 (12-206)||(7719259-7719453)
chr7 (1-199)||(8675329-8675527)
chr7 (1-199)||(28034811-28035009)
chr7 (1-206)||(12893411-12893616)
chr7 (1-206)||(18914734-18914939)
chr7 (1-206)||(34695276-34695481)
chr7 (1-206)||(44343395-44343600)
chr7 (18-206)||(7718361-7718549)
chr7 (1-199)||(7993138-7993336)
chr7 (1-206)||(20275262-20275467)
chr7 (1-206)||(47879171-47879376)
chr7 (1-178)||(12963697-12963874)
chr7 (1-206)||(34009015-34009221)
chr7 (1-206)||(3797066-3797261)
chr7 (1-206)||(12740369-12740573)
chr7 (1-199)||(509652-509840)
chr7 (1-140)||(44121965-44122104)
chr7 (1-205)||(19251535-19251729)
chr7 (1-142)||(46405494-46405635)
chr7 (76-206)||(32142916-32143046)
chr7 (1-140)||(37327923-37328062)
chr7 (23-206)||(39219376-39219558)
chr7 (5-140)||(40460772-40460907)
chr7 (1-171)||(32883778-32883948)
chr7 (1-196)||(44256775-44256970)
chr7 (76-206)||(7113530-7113660)
chr7 (1-140)||(33892315-33892454)
chr7 (1-140)||(39028093-39028232)
chr7 (1-206)||(9179876-9180071)
chr7 (77-206)||(43187356-43187485)
chr7 (76-176)||(43679492-43679592)
chr7 (1-140)||(29585511-29585649)
chr7 (1-199)||(41827310-41827498)
chr7 (1-175)||(25805688-25805862)
chr7 (1-162)||(10676463-10676624)
chr7 (1-129)||(17001099-17001227)
chr7 (1-129)||(47066699-47066828)
chr7 (91-199)||(37972873-37972981)
chr7 (5-187)||(1470252-1470432)
chr7 (1-196)||(44623295-44623480)
chr7 (80-199)||(19810874-19810983)
chr7 (1-138)||(31638878-31639015)
chr7 (1-187)||(727515-727692)
chr7 (1-101)||(29893077-29893177)
chr7 (74-135)||(447852-447913)
chr7 (1-52)||(48117746-48117797)
chr7 (111-189)||(10617024-10617102)
chr7 (12-60)||(10616955-10617003)
chr7 (19-55)||(40097140-40097176)
chr7 (1-52)||(12963655-12963706)
chr7 (1-52)||(19251493-19251544)
chr7 (1-52)||(29614959-29615010)
chr7 (1-52)||(34695192-34695243)
chr7 (1-52)||(39784053-39784104)
chr7 (21-55)||(28034997-28035031)
chr7 (23-55)||(3022902-3022934)
chr7 (1-52)||(8078398-8078450)
chr7 (167-199)||(17001049-17001081)
chr7 (19-55)||(39301247-39301283)
chr7 (23-55)||(41827290-41827322)
chr7 (1-45)||(43187545-43187589)
[»] chr6 (23 HSPs)
chr6 (1-199)||(31895697-31895895)
chr6 (1-199)||(34773410-34773608)
chr6 (1-206)||(6197477-6197682)
chr6 (1-199)||(14262439-14262637)
chr6 (1-205)||(2300738-2300942)
chr6 (1-199)||(34759056-34759255)
chr6 (1-206)||(1391625-1391830)
chr6 (2-206)||(7051847-7052051)
chr6 (1-206)||(28002666-28002871)
chr6 (23-199)||(7497099-7497274)
chr6 (1-206)||(29076599-29076805)
chr6 (1-206)||(29111572-29111779)
chr6 (1-140)||(30385122-30385261)
chr6 (74-199)||(31067567-31067682)
chr6 (91-199)||(4200443-4200541)
chr6 (1-139)||(3848213-3848348)
chr6 (1-100)||(656967-657065)
chr6 (157-206)||(2238668-2238717)
chr6 (165-205)||(11113733-11113773)
chr6 (19-55)||(10644016-10644052)
chr6 (19-55)||(30877898-30877934)
chr6 (1-52)||(31895655-31895706)
chr6 (1-52)||(34773368-34773419)
[»] chr4 (82 HSPs)
chr4 (1-199)||(5441405-5441603)
chr4 (1-199)||(27768057-27768255)
chr4 (1-199)||(54341145-54341343)
chr4 (1-199)||(37828409-37828607)
chr4 (1-199)||(51320922-51321120)
chr4 (1-206)||(25331132-25331337)
chr4 (1-206)||(55302844-55303049)
chr4 (1-206)||(41881082-41881288)
chr4 (1-199)||(32322092-32322290)
chr4 (1-199)||(54853475-54853673)
chr4 (1-196)||(37915828-37916023)
chr4 (1-206)||(1112894-1113099)
chr4 (1-206)||(12112946-12113151)
chr4 (1-230)||(22202016-22202245)
chr4 (1-205)||(32950837-32951041)
chr4 (1-206)||(39479355-39479562)
chr4 (1-206)||(1044810-1045013)
chr4 (1-206)||(7007375-7007580)
chr4 (1-206)||(34228583-34228788)
chr4 (1-185)||(19740929-19741113)
chr4 (24-206)||(42786708-42786890)
chr4 (1-197)||(44770862-44771059)
chr4 (1-206)||(9163077-9163274)
chr4 (1-206)||(37046450-37046657)
chr4 (1-206)||(30009677-30009882)
chr4 (1-230)||(46635624-46635847)
chr4 (1-199)||(23987215-23987403)
chr4 (8-142)||(29649731-29649865)
chr4 (71-206)||(41320881-41321016)
chr4 (1-199)||(41725126-41725321)
chr4 (1-176)||(28541699-28541874)
chr4 (1-206)||(3436594-3436799)
chr4 (1-206)||(39307253-39307458)
chr4 (5-199)||(12913229-12913413)
chr4 (12-177)||(25446062-25446227)
chr4 (71-199)||(48261198-48261326)
chr4 (1-199)||(36479249-36479436)
chr4 (1-129)||(49834890-49835018)
chr4 (1-140)||(30967365-30967504)
chr4 (1-140)||(50018252-50018391)
chr4 (1-206)||(31314742-31314933)
chr4 (1-205)||(40537161-40537350)
chr4 (1-206)||(24130981-24131177)
chr4 (5-129)||(32684065-32684188)
chr4 (12-206)||(53275851-53276046)
chr4 (71-176)||(7249795-7249900)
chr4 (1-129)||(49501588-49501716)
chr4 (1-129)||(49507653-49507781)
chr4 (1-162)||(28370925-28371086)
chr4 (76-206)||(27454078-27454208)
chr4 (24-140)||(28483923-28484039)
chr4 (1-162)||(23464956-23465117)
chr4 (112-199)||(8711978-8712065)
chr4 (112-199)||(24736447-24736534)
chr4 (1-149)||(25504696-25504844)
chr4 (3-200)||(41581795-41581991)
chr4 (1-129)||(5799978-5800107)
chr4 (77-199)||(56445362-56445474)
chr4 (131-206)||(11090435-11090510)
chr4 (1-197)||(20021345-20021531)
chr4 (72-198)||(13400814-13400942)
chr4 (131-199)||(30967316-30967384)
chr4 (1-52)||(37915786-37915837)
chr4 (1-59)||(11090350-11090408)
chr4 (1-47)||(29855682-29855728)
chr4 (1-55)||(37915744-37915798)
chr4 (96-198)||(55047641-55047742)
chr4 (106-198)||(12193135-12193227)
chr4 (19-55)||(40143822-40143858)
chr4 (19-55)||(54509760-54509796)
chr4 (1-52)||(5441363-5441414)
chr4 (1-52)||(30967495-30967546)
chr4 (10-52)||(41320788-41320830)
chr4 (1-50)||(20021303-20021352)
chr4 (22-55)||(28100584-28100617)
chr4 (1-50)||(41881281-41881330)
chr4 (22-55)||(50018189-50018222)
chr4 (19-55)||(26336123-26336159)
chr4 (156-196)||(32684018-32684058)
chr4 (5-86)||(40537307-40537388)
chr4 (11-55)||(41762017-41762061)
chr4 (19-55)||(47685190-47685226)
[»] chr1 (62 HSPs)
chr1 (1-199)||(29396395-29396593)
chr1 (1-196)||(51701575-51701770)
chr1 (5-199)||(6312573-6312767)
chr1 (1-199)||(25612152-25612350)
chr1 (1-206)||(21222142-21222347)
chr1 (1-199)||(9322507-9322705)
chr1 (1-199)||(15835060-15835258)
chr1 (1-199)||(48177469-48177667)
chr1 (1-206)||(9577432-9577637)
chr1 (1-206)||(19451808-19452013)
chr1 (1-198)||(46328037-46328234)
chr1 (1-199)||(28387400-28387598)
chr1 (1-206)||(50192550-50192756)
chr1 (1-206)||(35279667-35279872)
chr1 (1-206)||(6304252-6304458)
chr1 (1-206)||(45760009-45760215)
chr1 (1-206)||(28824373-28824577)
chr1 (1-206)||(35679128-35679333)
chr1 (1-206)||(49198269-49198473)
chr1 (1-196)||(32588963-32589158)
chr1 (1-206)||(47654351-47654557)
chr1 (5-206)||(37014640-37014841)
chr1 (1-129)||(18798486-18798614)
chr1 (1-206)||(45535939-45536150)
chr1 (1-201)||(49418079-49418279)
chr1 (1-206)||(47780706-47780911)
chr1 (1-199)||(38536106-38536294)
chr1 (1-199)||(38558324-38558512)
chr1 (13-206)||(29556111-29556305)
chr1 (74-206)||(31572197-31572329)
chr1 (1-128)||(49230881-49231008)
chr1 (1-199)||(29219283-29219469)
chr1 (1-171)||(730143-730314)
chr1 (5-140)||(5495162-5495297)
chr1 (1-177)||(48524314-48524490)
chr1 (1-206)||(33025507-33025703)
chr1 (1-206)||(48668785-48668977)
chr1 (1-129)||(45272582-45272708)
chr1 (1-91)||(8141243-8141333)
chr1 (71-162)||(51085860-51085951)
chr1 (1-129)||(47784382-47784509)
chr1 (79-138)||(955823-955882)
chr1 (1-93)||(22183365-22183457)
chr1 (74-129)||(31622536-31622591)
chr1 (96-198)||(38319996-38320098)
chr1 (1-52)||(953814-953865)
chr1 (93-139)||(43885157-43885203)
chr1 (18-55)||(10896845-10896882)
chr1 (169-206)||(48524805-48524842)
chr1 (19-55)||(1928406-1928442)
chr1 (131-195)||(5495117-5495181)
chr1 (19-55)||(36402293-36402329)
chr1 (1-52)||(15835249-15835300)
chr1 (1-52)||(19452046-19452097)
chr1 (1-52)||(25612110-25612161)
chr1 (156-198)||(18798621-18798663)
chr1 (1-50)||(28824570-28824619)
chr1 (1-50)||(49198466-49198514)
chr1 (19-55)||(29208801-29208837)
chr1 (19-55)||(33243312-33243348)
chr1 (19-55)||(33263485-33263521)
chr1 (22-54)||(42657763-42657795)
[»] chr8 (46 HSPs)
chr8 (1-199)||(14782141-14782339)
chr8 (1-199)||(44725816-44726014)
chr8 (1-230)||(26374405-26374634)
chr8 (1-199)||(19717887-19718085)
chr8 (1-206)||(24501812-24502017)
chr8 (1-196)||(18958736-18958931)
chr8 (1-196)||(39467477-39467672)
chr8 (1-199)||(9288463-9288661)
chr8 (1-206)||(42938116-42938321)
chr8 (1-206)||(2704818-2705023)
chr8 (1-205)||(10392237-10392441)
chr8 (1-199)||(10295386-10295585)
chr8 (1-199)||(26856068-26856267)
chr8 (1-206)||(5576619-5576825)
chr8 (1-206)||(42937355-42937558)
chr8 (13-206)||(7506898-7507091)
chr8 (1-206)||(23115168-23115372)
chr8 (1-206)||(42735276-42735481)
chr8 (1-206)||(4403109-4403314)
chr8 (1-199)||(18305977-18306165)
chr8 (1-199)||(43166696-43166894)
chr8 (1-140)||(16362198-16362337)
chr8 (1-129)||(31623697-31623825)
chr8 (1-199)||(7466337-7466525)
chr8 (1-199)||(32497527-32497715)
chr8 (1-140)||(42305850-42305989)
chr8 (1-129)||(4031334-4031462)
chr8 (1-206)||(41479099-41479294)
chr8 (1-206)||(43959660-43959854)
chr8 (1-206)||(39189815-39190017)
chr8 (71-200)||(4950021-4950150)
chr8 (1-194)||(32711305-32711486)
chr8 (24-140)||(37857144-37857260)
chr8 (77-185)||(8410416-8410526)
chr8 (71-186)||(13478269-13478384)
chr8 (142-206)||(9770439-9770503)
chr8 (1-63)||(18958911-18958973)
chr8 (80-128)||(9770497-9770545)
chr8 (72-128)||(41070018-41070074)
chr8 (1-52)||(14782330-14782381)
chr8 (1-52)||(19718076-19718127)
chr8 (1-52)||(44726005-44726056)
chr8 (19-52)||(4302813-4302846)
chr8 (2-50)||(4031455-4031503)
chr8 (23-55)||(32497465-32497497)
chr8 (19-55)||(37567365-37567401)
[»] chr3 (78 HSPs)
chr3 (1-199)||(36674137-36674335)
chr3 (1-230)||(19253828-19254057)
chr3 (1-199)||(34484037-34484235)
chr3 (1-206)||(20498210-20498415)
chr3 (3-199)||(40897147-40897343)
chr3 (5-199)||(11431531-11431725)
chr3 (1-199)||(44906520-44906718)
chr3 (1-206)||(996086-996291)
chr3 (1-206)||(6035053-6035258)
chr3 (1-206)||(10139146-10139351)
chr3 (2-199)||(32580179-32580375)
chr3 (1-199)||(17946289-17946487)
chr3 (1-199)||(26107262-26107460)
chr3 (5-206)||(33807798-33808000)
chr3 (1-206)||(3999645-3999850)
chr3 (13-206)||(6589577-6589770)
chr3 (1-199)||(48379158-48379356)
chr3 (1-199)||(52810379-52810577)
chr3 (1-199)||(31646293-31646489)
chr3 (1-199)||(52617978-52618170)
chr3 (1-206)||(37820477-37820682)
chr3 (1-206)||(40246845-40247050)
chr3 (20-199)||(18749632-18749811)
chr3 (1-199)||(54628844-54629043)
chr3 (24-206)||(3206205-3206387)
chr3 (1-186)||(51737746-51737932)
chr3 (1-206)||(25418367-25418572)
chr3 (1-206)||(29448858-29449063)
chr3 (1-206)||(35337736-35337939)
chr3 (1-230)||(53929104-53929333)
chr3 (1-200)||(33996547-33996746)
chr3 (1-199)||(50903247-50903448)
chr3 (1-195)||(20832993-20833187)
chr3 (13-206)||(54625605-54625798)
chr3 (1-140)||(10660536-10660675)
chr3 (1-206)||(44762037-44762242)
chr3 (1-199)||(10728658-10728846)
chr3 (1-199)||(39038041-39038229)
chr3 (4-205)||(52114532-52114734)
chr3 (1-129)||(23753463-23753591)
chr3 (77-206)||(5825139-5825268)
chr3 (1-191)||(51699495-51699684)
chr3 (5-198)||(29030011-29030203)
chr3 (1-199)||(37454862-37455050)
chr3 (1-199)||(50762067-50762255)
chr3 (1-188)||(6975750-6975924)
chr3 (24-134)||(539476-539586)
chr3 (8-205)||(44276397-44276580)
chr3 (13-174)||(55235198-55235359)
chr3 (123-206)||(6131233-6131316)
chr3 (95-206)||(1439894-1440005)
chr3 (23-206)||(27899367-27899540)
chr3 (1-151)||(1440007-1440158)
chr3 (1-171)||(22057762-22057933)
chr3 (71-206)||(39842494-39842619)
chr3 (76-206)||(52080003-52080117)
chr3 (1-60)||(18749571-18749630)
chr3 (5-100)||(12103634-12103729)
chr3 (152-206)||(33807680-33807734)
chr3 (5-100)||(15492967-15493061)
chr3 (71-127)||(23535890-23535946)
chr3 (1-41)||(27240408-27240448)
chr3 (1-52)||(6131325-6131376)
chr3 (142-199)||(45862983-45863040)
chr3 (19-55)||(27593198-27593234)
chr3 (19-55)||(36786017-36786053)
chr3 (5-52)||(6975712-6975759)
chr3 (1-52)||(10660494-10660545)
chr3 (1-44)||(27899387-27899430)
chr3 (1-52)||(36674326-36674377)
chr3 (1-50)||(3206394-3206443)
chr3 (22-55)||(10216163-10216196)
chr3 (22-55)||(10225671-10225704)
chr3 (1-50)||(23753584-23753633)
chr3 (143-198)||(12103733-12103789)
chr3 (19-55)||(39338299-39338335)
chr3 (5-45)||(44276352-44276392)
chr3 (23-63)||(51737912-51737952)
[»] chr5 (28 HSPs)
chr5 (1-199)||(14000111-14000309)
chr5 (1-206)||(21147069-21147274)
chr5 (1-206)||(1152102-1152307)
chr5 (1-199)||(7947579-7947777)
chr5 (1-199)||(13925933-13926131)
chr5 (1-196)||(4550266-4550461)
chr5 (1-200)||(5272924-5273123)
chr5 (12-206)||(33656040-33656234)
chr5 (1-206)||(7016738-7016943)
chr5 (26-199)||(39852372-39852545)
chr5 (5-206)||(27458949-27459149)
chr5 (1-200)||(139275-139474)
chr5 (1-140)||(4240517-4240656)
chr5 (1-199)||(1461154-1461342)
chr5 (1-199)||(40013718-40013906)
chr5 (1-200)||(32157899-32158102)
chr5 (1-206)||(22746299-22746496)
chr5 (1-199)||(5949111-5949298)
chr5 (24-186)||(849172-849334)
chr5 (1-129)||(37013916-37014044)
chr5 (1-172)||(6460794-6460965)
chr5 (1-166)||(14465266-14465431)
chr5 (36-206)||(9689695-9689864)
chr5 (1-206)||(9220716-9220911)
chr5 (1-52)||(40013897-40013948)
chr5 (1-50)||(5273116-5273165)
chr5 (22-55)||(26806578-26806611)
chr5 (19-55)||(17518474-17518510)
[»] chr2 (46 HSPs)
chr2 (1-206)||(24776358-24776563)
chr2 (1-206)||(16269694-16269899)
chr2 (1-206)||(20605239-20605444)
chr2 (1-206)||(31170626-31170831)
chr2 (1-199)||(18177270-18177468)
chr2 (1-199)||(33135626-33135823)
chr2 (1-199)||(28844558-28844756)
chr2 (1-206)||(14198579-14198784)
chr2 (1-199)||(25288162-25288360)
chr2 (1-206)||(5093049-5093254)
chr2 (1-206)||(12407383-12407588)
chr2 (1-206)||(22551765-22551970)
chr2 (1-206)||(43847649-43847854)
chr2 (1-199)||(10657409-10657607)
chr2 (1-181)||(26788787-26788969)
chr2 (1-200)||(35317065-35317264)
chr2 (1-206)||(305467-305672)
chr2 (1-140)||(7026607-7026746)
chr2 (1-199)||(28740302-28740490)
chr2 (1-200)||(32125253-32125455)
chr2 (1-186)||(1789445-1789630)
chr2 (1-230)||(44765778-44765998)
chr2 (1-206)||(9120129-9120334)
chr2 (8-199)||(3463682-3463863)
chr2 (1-129)||(3574850-3574978)
chr2 (1-129)||(6224626-6224755)
chr2 (1-199)||(13833441-13833629)
chr2 (1-206)||(10125302-10125499)
chr2 (88-199)||(43078653-43078764)
chr2 (1-113)||(215320-215432)
chr2 (1-140)||(378940-379079)
chr2 (1-138)||(26601270-26601407)
chr2 (71-127)||(21370631-21370687)
chr2 (1-52)||(20605155-20605206)
chr2 (1-63)||(13833609-13833671)
chr2 (19-55)||(11534881-11534917)
chr2 (19-55)||(34028935-34028971)
chr2 (156-199)||(6224576-6224619)
chr2 (1-52)||(7026565-7026616)
chr2 (1-52)||(10125490-10125541)
chr2 (1-52)||(26788745-26788796)
chr2 (8-54)||(19145036-19145082)
chr2 (1-50)||(24776316-24776365)
chr2 (23-55)||(7026545-7026577)
chr2 (19-55)||(20157759-20157795)
chr2 (19-55)||(24193595-24193631)
[»] scaffold0400 (1 HSPs)
scaffold0400 (1-206)||(15033-15238)
[»] scaffold0365 (1 HSPs)
scaffold0365 (1-206)||(15676-15881)
[»] scaffold0543 (2 HSPs)
scaffold0543 (1-199)||(10562-10760)
scaffold0543 (1-52)||(10520-10571)
[»] scaffold0151 (1 HSPs)
scaffold0151 (24-206)||(38605-38786)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-206)||(38895-39100)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-206)||(102095-102302)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-199)||(39624-39822)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-203)||(100213-100415)
[»] scaffold1504 (1 HSPs)
scaffold1504 (1-199)||(865-1063)
[»] scaffold0922 (2 HSPs)
scaffold0922 (1-136)||(4202-4337)
scaffold0922 (18-55)||(4135-4172)
[»] scaffold0306 (2 HSPs)
scaffold0306 (1-140)||(13884-14023)
scaffold0306 (167-199)||(14040-14072)
[»] scaffold0152 (4 HSPs)
scaffold0152 (1-140)||(21304-21443)
scaffold0152 (167-199)||(21255-21287)
scaffold0152 (111-139)||(28463-28491)
scaffold0152 (167-199)||(28510-28542)
[»] scaffold0276 (1 HSPs)
scaffold0276 (1-205)||(540-744)
[»] scaffold0054 (2 HSPs)
scaffold0054 (24-199)||(36914-37089)
scaffold0054 (1-44)||(37027-37070)
[»] scaffold0042 (1 HSPs)
scaffold0042 (21-199)||(58083-58262)
[»] scaffold0839 (1 HSPs)
scaffold0839 (100-186)||(3712-3798)
[»] scaffold0347 (1 HSPs)
scaffold0347 (131-206)||(14892-14967)
[»] scaffold0007 (1 HSPs)
scaffold0007 (79-172)||(199905-199998)
[»] scaffold0010 (3 HSPs)
scaffold0010 (1-57)||(233739-233795)
scaffold0010 (1-57)||(234587-234643)
scaffold0010 (1-57)||(222571-222627)


Alignment Details
Target: chr7 (Bit Score: 154; Significance: 1e-81; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 23101294 - 23101492
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  23101294 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 23101393  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  23101394 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 23101492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 28342343 - 28342541
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||||||||||||||||||||||    
T  28342343 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 28342442  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  28342443 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 28342541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 29614968 - 29614770
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||    
T  29614968 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaaaatcattcaaattt 29614869  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  29614868 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 29614770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 39784095 - 39784293
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| ||||||    
T  39784095 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaattt 39784194  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  39784195 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 39784293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 43581294 - 43581090
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| ||||||||||||  |||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  43581294 aatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 43581195  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43581194 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 43581095  T
Q  201 ggatt 205  Q
    |||||    
T  43581094 ggatt 43581090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 3022922 - 3023120
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||       ||||||||||||||||||||||||||||||    
T  3022922 aatcaagactttttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 3023021  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||| ||||||||||| ||||||||||||    
T  3023022 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttctt 3023120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 10068462 - 10068668
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtctt-gaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 99  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| ||       |||||||||||||||||||||||||||||    
T  10068462 aatcaagactctttgccattttaaaaaagtctttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 10068561  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    | ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||| ||    
T  10068562 ttgaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcataaaaacatgagatttgtt 10068661  T
Q  200 aggattg 206  Q
    |||||||    
T  10068662 aggattg 10068668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 40996853 - 40996648
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||  ||       |||| |||||||||||||||||||||||||    
T  40996853 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaattt 40996754  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40996753 cgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 40996654  T
Q  201 ggattg 206  Q
    ||||||    
T  40996653 ggattg 40996648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 9882440 - 9882243
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  9882440 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 9882341  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| || || |||||||  | ||||||||||||||| |||| ||||||||||||    
T  9882340 cgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaaaatgagatttctt 9882243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 18838385 - 18838583
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||       ||||||||||||||||||||||||||||||    
T  18838385 aatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaattt 18838484  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||| ||||||||||| ||||||||||||    
T  18838485 cgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttctt 18838583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 973187 - 973392
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||        | | |||||||||||||||||||||||||    
T  973187 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtattcaaaatcattcaaattt 973286  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  973287 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttctta 973386  T
Q  201 ggattg 206  Q
    ||||||    
T  973387 ggattg 973392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 30440799 - 30441004
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||| ||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  30440799 aatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 30440898  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  30440899 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaaaacatgagatttctta 30440998  T
Q  201 ggattg 206  Q
    ||||||    
T  30440999 ggattg 30441004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 47914269 - 47914474
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| ||||||||| || ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||    
T  47914269 aatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaattt 47914368  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47914369 cgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 47914468  T
Q  201 ggattg 206  Q
     |||||    
T  47914469 agattg 47914474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 33382633 - 33382828
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||  ||||||||||||||||| ||||||    
T  33382633 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaatcatttaaattt 33382732  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||| ||||||| |||||||||    
T  33382733 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagattt 33382828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 12 - 206
Target Start/End: Complemental strand, 7719453 - 7719259
Alignment:
Q  12 tttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgt 111  Q
    |||||||||| |||||||||||| ||||||||||||||||| || |||| ||        ||| ||||||||||||||||||||||||||||| ||||||    
T  7719453 tttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaatgattgt 7719354  T
Q  112 ttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 206  Q
    |||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7719353 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 7719259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 8675329 - 8675527
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||| ||| ||    
T  8675329 aatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaactt 8675428  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||| ||||| ||||||| ||||||||||||    
T  8675429 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttctt 8675527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 28035009 - 28034811
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||       ||||||||||||||||||| ||||||||||    
T  28035009 aatcaagactttttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaattt 28034910  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    | |||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| ||  ||||||||||||||||||| ||||||||||||    
T  28034909 caaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagatgagatttctt 28034811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 12893411 - 12893616
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| |||||| |||||||||| || |||| ||       ||||  ||||||||||||||||||||||||    
T  12893411 aatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaattt 12893510  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||| ||||||||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12893511 cgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 12893610  T
Q  201 ggattg 206  Q
    ||||||    
T  12893611 ggattg 12893616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 18914939 - 18914734
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||| | |||||||| ||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  18914939 aatcaaaattctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 18914840  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    | |||| |||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18914839 caaaggtttgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 18914740  T
Q  201 ggattg 206  Q
    ||||||    
T  18914739 ggattg 18914734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 34695276 - 34695481
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| || ||||||||| |||||||| ||| ||||||||||||||||| || |||| ||       |||  ||||||||||||| |||||||||||    
T  34695276 aatcaagattccttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaattt 34695375  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34695376 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 34695475  T
Q  201 ggattg 206  Q
    ||||||    
T  34695476 ggattg 34695481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 44343600 - 44343395
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| | ||||||||||||||| || |||| ||       || | |||||||| ||||||||||||||||    
T  44343600 aatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaaaatcattcaaattt 44343501  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  44343500 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaacatgagatttctta 44343401  T
Q  201 ggattg 206  Q
    ||||||    
T  44343400 ggattg 44343395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 7718549 - 7718361
Alignment:
Q  18 attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaata 117  Q
    |||| |||||||||||| ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||||||||||||||||    
T  7718549 atttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaata 7718450  T
Q  118 aattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 206  Q
    |||  ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7718449 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattg 7718361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 7993138 - 7993336
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||       ||||| ||||||||||||||||||||||||    
T  7993138 aatcaagactctttgccattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaattt 7993237  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||| || || ||||||| || |||||||||||||||||||| || |||||||||    
T  7993238 cgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttctt 7993336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 20275467 - 20275262
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| || ||||||||| |||||||||||  ||||||||||||||||| || |||| ||       ||||| ||||||||||||||||||||||||    
T  20275467 aatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatcattcaaattt 20275368  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||| ||||||||||||||    
T  20275367 cgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatgagatttctta 20275268  T
Q  201 ggattg 206  Q
    | ||||    
T  20275267 gcattg 20275262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 47879171 - 47879376
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| ||||||||| || ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||    
T  47879171 aatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaattt 47879270  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
      ||||||||||||||||||  |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47879271 aaaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 47879370  T
Q  201 ggattg 206  Q
     |||||    
T  47879371 agattg 47879376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 12963697 - 12963874
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| | ||       |||| ||||||| |||||||||||||||||    
T  12963697 aatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagatttttcattacttaaaaaaagtctcgtggtatccaaaatcattcaaattt 12963796  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtcttt 178  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||    
T  12963797 cgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtaagaaaaagtcttt 12963874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 34009015 - 34009221
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtctt-gtggtattcaaaatcattcaaatt 99  Q
    |||||||| | |||||||||| |||||||||||| ||||||||||||| ||| || |||| ||       ||| | ||||||||||||||||||||||||    
T  34009015 aatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtattcaaaatcattcaaatt 34009114  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||  |||||||||||||||||||| |||||||| | |||||||||||| ||||||||||||| ||||||||||||||||||    
T  34009115 tcgaaggattgtttaataaatcagattttgatggattttgtggaattttctaataaaattttagcataaaaaagtctttcaagaaaacatgagatttctt 34009214  T
Q  200 aggattg 206  Q
    |||||||    
T  34009215 aggattg 34009221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 3797261 - 3797066
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||||||||| |||||| ||||||    
T  3797261 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaagatcattaaaattt 3797162  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
     |||||||||||||||||||| ||||||||         |||||||||||| |||||||||||||||||||||||||| | |||||||| ||||||||||    
T  3797161 tgaaggattgtttaataaattagattttga---------tgggattttctagtgaaattttagcatgaaaaagtcttttaagaaaacat-agatttctta 3797072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 12740369 - 12740573
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||       |||| |||||||||||||||||||||||||    
T  12740369 aatcaagattctttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtattcaaaatcattcaaattt 12740468  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    | ||||||||||||||||| ||||||||||| |||||||||||||||| || || ||||||| || || |||||||||||| |||| |||||||||||||    
T  12740469 caaaggattgtttaataaa-tggattttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcataaaaagatgagatttctta 12740567  T
Q  201 ggattg 206  Q
     |||||    
T  12740568 agattg 12740573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 509652 - 509840
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  509652 aatcaagactatttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 509751  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||| ||||||||||||||||||||||||||||||||||| |          ||  |||||| || |||||||||||||||||||| ||||||||||||    
T  509752 cgaacgattgtttaataaattggattttgatggattttgtag----------tgggattttaacaagaaaaagtctttcatgaaaagatgagatttctt 509840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 44122104 - 44121965
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||    
T  44122104 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaattt 44122005  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgt 140  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44122004 cgaaggattgtttaataaattggattttgatggattttgt 44121965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 19251535 - 19251729
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||       |||| |||||||||||||||||||||||||    
T  19251535 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaattt 19251634  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    |||||||||||||||||||||||||||||||          |||||||||  |||||||||||||  |||||||||||||||||||| ||| |||||||     
T  19251635 cgaaggattgtttaataaattggattttgat----------ggattttcttgtgaaattttagcaataaaaagtctttcatgaaaacctgaaatttcttg 19251724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 46405635 - 46405494
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  46405635 aatcaagactctttgtcgttttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 46405536  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgg 142  Q
    | || |||||||||||||||||||||||||||||||||||||    
T  46405535 caaatgattgtttaataaattggattttgatggattttgtgg 46405494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 76 - 206
Target Start/End: Complemental strand, 32143046 - 32142916
Alignment:
Q  76 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtc 175  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32143046 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 32142947  T
Q  176 tttcatgaaaacatgagatttcttaggattg 206  Q
    || ||| |||||||||||||||||| |||||    
T  32142946 ttccataaaaacatgagatttcttaagattg 32142916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 37327923 - 37328062
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||       ||||||||||||||||||||||||||||||    
T  37327923 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 37328022  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgt 140  Q
    | |||||||||||||||||||| |||||||||||||||||    
T  37328023 caaaggattgtttaataaattgaattttgatggattttgt 37328062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 23 - 206
Target Start/End: Complemental strand, 39219558 - 39219376
Alignment:
Q  23 aaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattg 122  Q
    |||||||||||| | ||||||||||||||| || |||| ||       ||||  |||||||||||||||||||||||| || | ||||||||||||||      
T  39219558 aaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtattcaaaatcattcaaattttgatg-attgtttaataaatca 39219460  T
Q  123 gattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 206  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39219459 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattg 39219376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 40460907 - 40460772
Alignment:
Q  5 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 104  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||    
T  40460907 aagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 40460808  T
Q  105 ggattgtttaataaattggattttgatggattttgt 140  Q
     |||||||||||||||||||||||||||||||||||    
T  40460807 tgattgtttaataaattggattttgatggattttgt 40460772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 32883778 - 32883948
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  32883778 aatcaagactttttgtcattttaaaaaagtcttgaagtattcaattaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 32883877  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaa 171  Q
    |||| ||||||||| |||||||||||||||||||||| |||||||||| || || ||||||| || |||||    
T  32883878 cgaatgattgtttattaaattggattttgatggatttcgtgggattttgtagtgtaattttaacaagaaaa 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 44256970 - 44256775
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||| ||       || | |||||||||||||||||||||||||    
T  44256970 aatcaagactttttgtcattttaaaaaaatcttaaggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcattcaaattt 44256871  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 196  Q
    |||| |||||||||||||||||||||| |||| ||||||| |||||||  | || ||||||| || |||||||| |||||| |||| |||||||||    
T  44256870 cgaatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaaaatatgagattt 44256775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 76 - 206
Target Start/End: Original strand, 7113530 - 7113660
Alignment:
Q  76 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtc 175  Q
    |||||||||||||| |||||||||||| |||||||||||||||||  ||||||||| |||||||||||||||||||   |||||||||||||||||||||    
T  7113530 gtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagtc 7113629  T
Q  176 tttcatgaaaacatgagatttcttaggattg 206  Q
    |||||||||||||||| ||||||||||||||    
T  7113630 tttcatgaaaacatgaaatttcttaggattg 7113660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 33892454 - 33892315
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  33892454 aatcaacactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcattcaaattt 33892355  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgt 140  Q
    |||| ||||||| ||||||||||||||| ||| |||||||    
T  33892354 cgaatgattgttaaataaattggatttttatgaattttgt 33892315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 39028093 - 39028232
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||       |||||||| ||||||||||| ||||||||     
T  39028093 aatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaaatcgttcaaatta 39028192  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgt 140  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  39028193 cgaaagattgtttaataaattggattttgatggattttgt 39028232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 9179876 - 9180071
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||| |||  |||||||||||||||| ||||||| ||       |||||||||||| |||||||| | |||||     
T  9179876 aatcaagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcacttaaattc 9179975  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||          ||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  9179976 cgaaggattgtttaataaat----------tggattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatttctta 9180065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 43187485 - 43187356
Alignment:
Q  77 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtct 176  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| || ||||||||||    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtct 43187386  T
Q  177 ttcatgaaaacatgagatttcttaggattg 206  Q
    |||||||| ||||||||||| || ||||||    
T  43187385 ttcatgaagacatgagattttttgggattg 43187356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 76 - 176
Target Start/End: Original strand, 43679492 - 43679592
Alignment:
Q  76 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtc 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43679492 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 43679591  T
Q  176 t 176  Q
    |    
T  43679592 t 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 29585511 - 29585649
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||| ||       ||||| ||||||||||||||||||||||||    
T  29585511 aatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaaactttt-atcacttaaaaaaagtcttctggtattcaaaatcattcaaattt 29585609  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgt 140  Q
     ||||||||||||||||| |||||||||||||||||||||    
T  29585610 tgaaggattgtttaataatttggattttgatggattttgt 29585649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 41827310 - 41827498
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| | ||       |||||||||||||||||||          |    
T  41827310 aatcaagactttttgtcattttaaaaaaatcttgaggtgttcaatcaagacttttcataacttaaaaaaagtcttgtggtattcaaaat----------t 41827399  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
     ||||||||||||||||||||||||||||||||||||||||||||| | || || ||||||| || ||||| |||||||||||||| ||||||||||||    
T  41827400 tgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatgagatttctt 41827498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 25805688 - 25805862
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||||||| |||| |||||| ||| | ||||||||||||| | ||||||||| ||          |||||||||||||||||||||||||||    
T  25805688 aatcaagattctttgtaatttaaaaaaaatctagtggtattcaatcaaaatttttcatcacttaaaaaaaaatttgtggtattcaaaatcattcaaattt 25805787  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtc 175  Q
    || ||||||||||||||||||| ||| |||||||||||||||||||||||| | |||||||||||||||||||||    
T  25805788 cgtaggattgtttaataaattgaattatgatggattttgtgggattttctaataaaattttagcatgaaaaagtc 25805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 10676624 - 10676463
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||  |||| ||||| |||||| ||||||||||||||||||||||||| ||       ||||  | ||||||||||||||||||||||    
T  10676624 aatcaagactctttgcaatttaaaaaaggtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaaatcattcaaattt 10676525  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaatttta 162  Q
    ||||||||||||||||||||||||||| |||||||||| ||| |||||||  ||||||||||    
T  10676524 cgaaggattgtttaataaattggatttggatggattttatggaattttcttgtgaaatttta 10676463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 17001227 - 17001099
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||        | | |||||||||||||||||||||||||    
T  17001227 aatcaagactctttgtcatttttaaaaagtcttgaggtattcaataaagacttttcatcacttaaaaaaaatatcgtggtattcaaaatcattcaaattt 17001128  T
Q  101 cgaaggattgtttaataaattggattttg 129  Q
    |||||||||||||||||||||||||||||    
T  17001127 cgaaggattgtttaataaattggattttg 17001099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 47066699 - 47066828
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatt 99  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||| |  |||||||| ||        |||||||||||||||||||||||||||||    
T  47066699 aatcaaaactctttgtcattttaaaaaagtcttgacgtattcaatcaaaaaatttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaatt 47066798  T
Q  100 tcgaaggattgtttaataaattggattttg 129  Q
    ||||||||||||||||||||||||||||||    
T  47066799 tcgaaggattgtttaataaattggattttg 47066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 91 - 199
Target Start/End: Complemental strand, 37972981 - 37972873
Alignment:
Q  91 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatg 190  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| || || ||||||| || |||||||||||||||||||| |||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  191 agatttctt 199  Q
    ||| |||||    
T  37972881 agacttctt 37972873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 1470432 - 1470252
Alignment:
Q  5 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 104  Q
    |||||| |||||||||| |||||||||||| | ||||||||  | ||||||||||||||       || ||||||||||||||||| |||||||||  ||    
T  1470432 aagactatttgtcatttaaaaaaagtcttgtgatattcaatataaacttttcatcatttaaaaaa-gtattgtggtattcaaaatcgttcaaattttaaa 1470334  T
Q  105 ggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaac 187  Q
    | |||||||||| |||| ||||||||| | ||||||||||||||||  | |||||||||||||||||| |||||  |||||||    
T  1470333 gcattgtttaatgaattagattttgatag-ttttgtgggattttctgataaaattttagcatgaaaaaatcttttttgaaaac 1470252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 44623480 - 44623295
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||||||||||||| |||||||||||| |||||| |||||||||| ||||||| ||       |||| ||| |||||||||||||||| ||||    
T  44623480 aatcaagactctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaatcattcatattt 44623381  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 196  Q
    | || || ||||||||||||          || ||||||||| |||||||| ||||||||||| |||||||||||| |||| |||| |||| ||||    
T  44623380 ctaaagactgtttaataaat----------tgaattttgtggaattttctagtgaaattttagaatgaaaaagtctctcataaaaatatgatattt 44623295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 80 - 199
Target Start/End: Original strand, 19810874 - 19810983
Alignment:
Q  80 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttc 179  Q
    |||||||||||||||||||||| || |||||||||||||||||||          |||||||| |||||||| |||||||||||||| |||| |||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaattgga----------ttttgtggaattttctagtgaaattttagcataaaaatgtctttc 19810963  T
Q  180 atgaaaacatgagatttctt 199  Q
    ||||||||||||||||||||    
T  19810964 atgaaaacatgagatttctt 19810983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 31638878 - 31639015
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||| | |||||||||||| |||||| |  || ||||||| ||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  31638878 aatcaaaattctttgtcatttaaaaaaacttgtgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 31638977  T
Q  101 cgaaggattgtttaataaattggattttgatggatttt 138  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  31638978 cgaaggattgtttaataaatcagattttgatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 727515 - 727692
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnng-tcttgtggtattcaaaatcattcaaatt 99  Q
    |||||| | |||||||||||| |||||||||||| | ||||||||||| ||| || |||| ||         ||| || |||||||||||||||||||||    
T  727515 aatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaatcaaaactctttatcacttaaaaaaaaatctagtagtattcaaaatcattcaaatt 727614  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaac 187  Q
    || ||||||||||||||||||  ||||          ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  727615 tcaaaggattgtttaataaatcagatt----------ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 727692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 29893077 - 29893177
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||       ||||||| ||||| ||||| ||||||||||    
T  29893077 aatcaagactctttgtcattttaaaacagtcatgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtagtatttaaaataattcaaattt 29893176  T
Q  101 c 101  Q
    |    
T  29893177 c 29893177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 447852 - 447913
Alignment:
Q  74 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 135  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  447852 ttgtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 48117797 - 48117746
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  48117797 aatcaagactctttgtcatttttgaaaagtcttgaggtattcaatcaagact 48117746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 10617024 - 10617102
Alignment:
Q  111 tttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacat 189  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||| ||||||| |  || ||||||||||| |||||||    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacat 10617102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 10616955 - 10617003
Alignment:
Q  12 tttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca 60  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||| |||||    
T  10616955 tttgtcatttttaaaaagtcttgaggtattcgatcaagattttccatca 10617003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 40097140 - 40097176
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||||||||| |||||||||||||||||||||    
T  40097140 ttttaaaaaagtctttaggtattcaatcaagactttt 40097176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12963655 - 12963706
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||||||||  | || |||||||||||| |||||||||||||||||    
T  12963655 aatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaagact 12963706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19251493 - 19251544
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||||||||  | || |||||||||||| |||||||||||||||||    
T  19251493 aatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaagact 19251544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 29615010 - 29614959
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  29615010 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 29614959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 34695192 - 34695243
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    ||||||||||||||   |||| |||||||||||| |||||||||||||||||    
T  34695192 aatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaagact 34695243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 39784053 - 39784104
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  39784053 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 39784104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 28035031 - 28034997
Alignment:
Q  21 ttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    |||||||||||||| ||||||||||||||||||||    
T  28035031 ttaaaaaagtcttgtggtattcaatcaagactttt 28034997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 3022902 - 3022934
Alignment:
Q  23 aaaaaagtcttgaggtattcaatcaagactttt 55  Q
    |||||||||||| ||||||||||||||||||||    
T  3022902 aaaaaagtcttgtggtattcaatcaagactttt 3022934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8078398 - 8078450
Alignment:
Q  1 aatcaagactctttgtcattttaaaaa-agtcttgaggtattcaatcaagact 52  Q
    |||||||| |||||||||||| ||||| | ||||| |||||||||||||||||    
T  8078398 aatcaagattctttgtcatttaaaaaagaatcttgtggtattcaatcaagact 8078450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 17001081 - 17001049
Alignment:
Q  167 gaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||| ||||||||||||    
T  17001081 gaaaaagtctttcatgaaaatatgagatttctt 17001049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 39301283 - 39301247
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  39301283 ttttaaaaaagtctttaggtatttaatcaagactttt 39301247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 41827290 - 41827322
Alignment:
Q  23 aaaaaagtcttgaggtattcaatcaagactttt 55  Q
    |||||||||||| ||||||||||||||||||||    
T  41827290 aaaaaagtcttgtggtattcaatcaagactttt 41827322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 43187589 - 43187545
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaat 45  Q
    |||||||||||||||| |||| |||||||||||  ||||||||||    
T  43187589 aatcaagactctttgtaatttaaaaaaagtcttatggtattcaat 43187545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 1e-81; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 31895697 - 31895895
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  31895697 aatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 31895796  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| || |||||||||||||||||||| ||||||||||||    
T  31895797 cgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 31895895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 34773410 - 34773608
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  34773410 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaattt 34773509  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  | || ||||||| || |||||||||||||||||||| ||||||||||||    
T  34773510 cgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 6197682 - 6197477
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  6197682 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 6197583  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6197582 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 6197483  T
Q  201 ggattg 206  Q
    ||||||    
T  6197482 ggattg 6197477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 14262637 - 14262439
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||| ||||||    
T  14262637 aatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaattt 14262538  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||| ||||||||    
T  14262537 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgggatttctt 14262439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 2300942 - 2300738
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       ||||  ||||||| ||||||||||||||||    
T  2300942 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaaaatcattcaaattt 2300843  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2300842 cgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 2300743  T
Q  201 ggatt 205  Q
    |||||    
T  2300742 ggatt 2300738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 34759255 - 34759056
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 99  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||    
T  34759255 aatcaagactctttgtcattttaaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 34759156  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||| ||||||||||||| ||||||||||||    
T  34759155 tccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 34759056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 1391625 - 1391830
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| || ||||||||| || ||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  1391625 aatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 1391724  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
     |||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  1391725 ggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattcctta 1391824  T
Q  201 ggattg 206  Q
    ||||||    
T  1391825 ggattg 1391830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 2 - 206
Target Start/End: Original strand, 7051847 - 7052051
Alignment:
Q  2 atcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttc 101  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||||||||||| ||||||| ||       ||| |||| ||||||||||||||||||||||    
T  7051847 atcaagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaatcattcaaatttc 7051946  T
Q  102 gaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttag 201  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| |||||| ||| |||||||||||||||    
T  7051947 gaaggattgtttaataaattggattttgatggattttgtaggattttctagtaaaattttagcatgaaaaagtttttcataaaatcatgagatttcttag 7052046  T
Q  202 gattg 206  Q
     ||||    
T  7052047 aattg 7052051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 28002666 - 28002871
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| | |||||||||| |||||||||||  ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||    
T  28002666 aatcaagattttttgtcatttaaaaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaattt 28002765  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
     |||||||||||||||||||  |||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||   ||||||    
T  28002766 ggaaggattgtttaataaatcagattttgatggattttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaagcttctta 28002865  T
Q  201 ggattg 206  Q
    ||||||    
T  28002866 ggattg 28002871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 23 - 199
Target Start/End: Original strand, 7497099 - 7497274
Alignment:
Q  23 aaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattg 122  Q
    |||||||||||| ||||||||||||||| ||||||||| ||       ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7497099 aaaaaagtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattg 7497198  T
Q  123 gattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||| ||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  7497199 gattttgatggattttgt-ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 7497274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 29076599 - 29076805
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatt 99  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||| ||| | || |||| ||        |||| || |||||||||||||||||||||    
T  29076599 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtattcaaaatcattcaaatt 29076698  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||  |||||||||||||||| | |||||||||| |||||||||||||||||||| |||||||| |||||||||||||| ||    
T  29076699 tcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgagatttttt 29076798  T
Q  200 aggattg 206  Q
    |||||||    
T  29076799 aggattg 29076805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 29111572 - 29111779
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn--gtcttgtggtattcaaaatcattcaaat 98  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||| ||| | || |||| ||         |||| || ||||||||||||||||||||    
T  29111572 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtagtattcaaaatcattcaaat 29111671  T
Q  99 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 198  Q
    ||||||||||||||||||||||  |||||||||||||||| | |||||||||| |||||||||||||||||||| |||||||| |||||||||||||| |    
T  29111672 ttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgagattttt 29111771  T
Q  199 taggattg 206  Q
    ||||||||    
T  29111772 taggattg 29111779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 30385261 - 30385122
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||| ||       ||||||||||||||||||||||||||||||    
T  30385261 aatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 30385162  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgt 140  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  30385161 cgaaggattgtttaataaattggattttgtgggattttgt 30385122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 199
Target Start/End: Original strand, 31067567 - 31067682
Alignment:
Q  74 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaag 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||| || || ||||||| || |||||||    
T  31067567 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaag 31067656  T
Q  174 tctttcatgaaaacatgagatttctt 199  Q
    |||||||| |||| ||||||||||||    
T  31067657 tctttcataaaaagatgagatttctt 31067682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 91 - 199
Target Start/End: Complemental strand, 4200541 - 4200443
Alignment:
Q  91 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatg 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          || || ||||||| || |||||||||||||||||||| |||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 3848213 - 3848348
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||| ||| |||||||||| ||| |||| ||| |||| |||||||||||||  ||||| ||       || |||||||||||||||||||| ||||||    
T  3848213 aatcaaaactttttgtcatttaaaacaagtattgtggtaatcaatcaagactt--catcacttaaaaaaagttttgtggtattcaaaatcatttaaattt 3848310  T
Q  101 cgaaggattgtttaataaattggattttgatggattttg 139  Q
     ||| ||||||||||||||||| |||||| |||||||||    
T  3848311 tgaatgattgtttaataaattgaattttg-tggattttg 3848348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 656967 - 657065
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||| ||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| ||||||||| |||||||||||||||    
T  656967 aatcaagattctttg-catttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatcattcaaattt 657065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 2238668 - 2238717
Alignment:
Q  157 attttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 206  Q
    ||||||| |||||||| ||||||||||||||||||||||||||| |||||    
T  2238668 attttagtatgaaaaaatctttcatgaaaacatgagatttcttaagattg 2238717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 11113773 - 11113733
Alignment:
Q  165 atgaaaaagtctttcatgaaaacatgagatttcttaggatt 205  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  11113773 atgaaaacgtctttcatgaaaacatgagatttcttaggatt 11113733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 10644052 - 10644016
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||||||||| |||||||||||||||||||||    
T  10644052 ttttaaaaaagtctttaggtattcaatcaagactttt 10644016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 30877898 - 30877934
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||||||||| |||||||||||||||||||||    
T  30877898 ttttaaaaaagtctttaggtattcaatcaagactttt 30877934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 31895655 - 31895706
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  31895655 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 31895706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 34773368 - 34773419
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  34773368 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 34773419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 1e-81; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 5441405 - 5441603
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  5441405 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 5441504  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  5441505 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 5441603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 27768057 - 27768255
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  27768057 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 27768156  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  27768157 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 27768255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 54341145 - 54341343
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  54341145 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 54341244  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  54341245 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 54341343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 37828607 - 37828409
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||    
T  37828607 aatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 37828508  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||  | |||||||||||||||||||| ||||||||||||    
T  37828507 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaaaagatgagatttctt 37828409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 51320922 - 51321120
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  51320922 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 51321021  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| || || ||||||| || |||||||| ||||||||||| ||||||||||||    
T  51321022 cgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttctt 51321120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 25331132 - 25331337
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||    
T  25331132 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaattt 25331231  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    | ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25331232 caaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 25331331  T
Q  201 ggattg 206  Q
    ||||||    
T  25331332 ggattg 25331337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 55302844 - 55303049
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||||||||||||| || ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  55302844 aatcaagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 55302943  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  55302944 cgaaggattgtttaataaatcagattttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 55303043  T
Q  201 ggattg 206  Q
     |||||    
T  55303044 agattg 55303049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 41881288 - 41881082
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatt 99  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||        || | ||||||||||||||||||||||||    
T  41881288 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtattcaaaatcattcaaatt 41881189  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41881188 tcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 41881089  T
Q  200 aggattg 206  Q
    |||||||    
T  41881088 aggattg 41881082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 32322092 - 32322290
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||       ||||||||||||||||||||||||||||||    
T  32322092 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaatcattcaaattt 32322191  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| || || |||||||  | ||||| ||||||||| |||| ||||||||||||    
T  32322192 cgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaagatgagatttctt 32322290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 54853673 - 54853475
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||       ||||||||||||||||||| ||||||||||    
T  54853673 aatcaagactctttttcattttaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaattt 54853574  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    | |||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||| ||||||||||||| ||||||||||||    
T  54853573 caaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 54853475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 37915828 - 37916023
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  37915828 aatcaagactctctatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 37915927  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || | ||||| || ||||||||| |||||||||| || ||||||    
T  37915928 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaagataagattt 37916023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 1112894 - 1113099
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  1112894 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 1112993  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    | || |||||||||||||||  ||||||||||||||||||||||||| ||| | |||||||| |||||||||||||||||||||||||||||||||||||    
T  1112994 caaatgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgagatttctta 1113093  T
Q  201 ggattg 206  Q
    ||||||    
T  1113094 ggattg 1113099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 12112946 - 12113151
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||| ||| || |||| ||       ||||  ||||||||||||||||||||||||    
T  12112946 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaattt 12113045  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  12113046 cgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttg 12113145  T
Q  201 ggattg 206  Q
    ||||||    
T  12113146 ggattg 12113151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 22202016 - 22202245
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||| ||||||    
T  22202016 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaattt 22202115  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    | || |||||||||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22202116 caaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacattagatttctta 22202215  T
Q  201 ggattgnnnnnnncttttaaaattttacta 230  Q
    | ||||       |||||||||||||||||    
T  22202216 gcattgtttttttcttttaaaattttacta 22202245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 32951041 - 32950837
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| | |||||||||| ||||||||| || ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  32951041 aatcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 32950942  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  |||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  32950941 cgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttctta 32950842  T
Q  201 ggatt 205  Q
     ||||    
T  32950841 agatt 32950837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 39479562 - 39479355
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn--gtcttgtggtattcaaaatcattcaaat 98  Q
    |||||||| || ||||||||| |||||||||||| ||||||||||||||||| || |||| ||         | ||||||||||||||||||||||||||    
T  39479562 aatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtattcaaaatcattcaaat 39479463  T
Q  99 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 198  Q
    ||||||| ||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  39479462 ttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatgaaagcatgagatttct 39479363  T
Q  199 taggattg 206  Q
    ||||||||    
T  39479362 taggattg 39479355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 1044810 - 1045013
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| || |||||||||  ||||||||||| ||||||||||||||||| || |||| ||       |||| ||||||||||||| ||||||| |||    
T  1044810 aatcaagattccttgtcattt--aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaacttt 1044907  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1044908 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctta 1045007  T
Q  201 ggattg 206  Q
    | ||||    
T  1045008 gaattg 1045013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 7007375 - 7007580
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||| |||||||| ||||||||| || ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  7007375 aatcaagattctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 7007474  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  |||||||||| |||||||||||||||||| |||||||||||||||||||  | |||||||||||||||||||||||||    
T  7007475 cgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacatgagatttctta 7007574  T
Q  201 ggattg 206  Q
     |||||    
T  7007575 agattg 7007580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 34228788 - 34228583
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| ||||||||| || ||||||||||||| | | || |||| ||       |||| |||||||||||||||||| ||||||    
T  34228788 aatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattgaaattt 34228689  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    |||| |||||||||||||||  |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34228688 cgaatgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 34228589  T
Q  201 ggattg 206  Q
     |||||    
T  34228588 agattg 34228583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 19741113 - 19740929
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||||||||||||  |||||||| || |||||||| ||||||||||| |||| ||       ||||||||||||| ||||||||||||||||    
T  19741113 aatcaagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtattaaaaatcattcaaattt 19741014  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaa 185  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  19741013 cgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 24 - 206
Target Start/End: Original strand, 42786708 - 42786890
Alignment:
Q  24 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 123  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||       
T  42786708 aaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcat 42786807  T
Q  124 attttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 206  Q
    ||||||||||||||||||| |||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||    
T  42786808 attttgatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattg 42786890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 44771059 - 44770862
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggta-ttcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 99  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| ||        |||  |||||||||||||||||||||||    
T  44771059 aatcaagactctttgtcattttaaaaaaatcttgaggtaattcaatcaagatttttcatcacttaaaaaaaatctcatggtattcaaaatcattcaaatt 44770960  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 197  Q
    | |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  | |||||||||||||||||  ||||||||||||    
T  44770959 ttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtctttcatgacgacatgagatttc 44770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 9163077 - 9163274
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||  |       |||||||| |||||||||||||||||||||    
T  9163077 aatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaaaatcattcaaattt 9163176  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||||| |||||||||||||||||        |||||||||||||||||||||||    
T  9163177 cgaaggattgtttaataaattaaattttgatggattttgtggaattttctagtgaaattttagcatgaa--------tcatgaaaacatgagatttctta 9163268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 37046657 - 37046450
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatt 99  Q
    |||||||| |||||||||||| |||||||| ||| ||||||||||||||||| || |||| ||        |||| ||| |||| |||||||||||||||    
T  37046657 aatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaatcattcaaatt 37046558  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactg-aaattttagcatgaaaaagtctttcatgaaaacatgagatttct 198  Q
    |||||||||||||||||||||  |||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  37046557 tcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatgaaaatatgagatttct 37046458  T
Q  199 taggattg 206  Q
    ||||||||    
T  37046457 taggattg 37046450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 30009882 - 30009677
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||| | ||||| |||||| ||||||||| || ||||||||||||||||| || |||| ||       |||| |||||||||||||||||| ||||||    
T  30009882 aatcaaaattctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaattt 30009783  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
      || |||||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  30009782 taaatgattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 30009683  T
Q  201 ggattg 206  Q
     |||||    
T  30009682 agattg 30009677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 46635847 - 46635624
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       || | || ||||||||||||||||||||||    
T  46635847 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaaatcattcaaattt 46635748  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||      |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  46635747 cgaaggattgtttaataaataagatt------gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttctta 46635654  T
Q  201 ggattgnnnnnnncttttaaaattttacta 230  Q
    ||||||       |||||||||||||||||    
T  46635653 ggattgtttttttcttttaaaattttacta 46635624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 23987215 - 23987403
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||       ||||||||||||||||||||||||||||||    
T  23987215 aatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 23987314  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||||||||||||||||||| |||||||||||||||||          || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  23987315 cgaaggattgtttaataaattagattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 23987403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 29649865 - 29649731
Alignment:
Q  8 actctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaagga 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||| ||    
T  29649865 actctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaaga 29649766  T
Q  108 ttgtttaataaattggattttgatggattttgtgg 142  Q
    |||||||||||||||||||||||||||||||||||    
T  29649765 ttgtttaataaattggattttgatggattttgtgg 29649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 71 - 206
Target Start/End: Original strand, 41320881 - 41321016
Alignment:
Q  71 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaa 170  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||| ||||||||||| ||||||    
T  41320881 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaattttagtatgaaa 41320980  T
Q  171 aagtctttcatgaaaacatgagatttcttaggattg 206  Q
    ||||||||||| |||||||||||||||||| |||||    
T  41320981 aagtctttcataaaaacatgagatttcttaagattg 41321016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 41725126 - 41725321
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||  |       |||||||| |||||||||||||||||||||    
T  41725126 aatcaatactctttgtcattttaaaaaagtcttgatgtatgcaatcaagacttttcatcacctaaaaaaagtcttgtgatattcaaaatcattcaaattt 41725225  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
     ||||||||||||||   |||||||||||||| ||||||||||||||| || || ||||||| || |||||| ||||||||||||| ||||||||||||    
T  41725226 tgaaggattgtttaa---attggattttgatgaattttgtgggattttatagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 41725321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 28541699 - 28541874
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||| | ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  28541699 aatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 28541798  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtct 176  Q
    |||| |||||||||||||||  |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  28541799 cgaatgattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 3436594 - 3436799
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| | |||||| ||| |||||| ||||| | ||||||||||||||| || |||||||        |||  ||||||||||||||||||||||||    
T  3436594 aatcaagattttttgtcgtttaaaaaaaatcttgtgatattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaatcattcaaattt 3436693  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||| || |||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  3436694 cgaaggattgtttaataaatcagattttgatgaattttgtgggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacataagatttctta 3436793  T
Q  201 ggattg 206  Q
    | ||||    
T  3436794 gaattg 3436799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 39307458 - 39307253
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| | |||| |||||||||||||||||| ||||||||||||||| | ||||||||||       ||||||||||||||| ||||||||||||||    
T  39307458 aatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcataatcattcaaattt 39307359  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    | || |||| |||||| |||||  |||||||| |||||||||||||||||| |||||||||| ||||||||||| | | || ||||||||||||||||||    
T  39307358 ctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaaaacatgagatttctta 39307259  T
Q  201 ggattg 206  Q
    | ||||    
T  39307258 gaattg 39307253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 12913229 - 12913413
Alignment:
Q  5 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||       ||||  |||||||||||||||||||||||| |||    
T  12913229 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagctttttcatcatttaaaaaaagtctcatggtattcaaaatcattcaaattttgaa 12913328  T
Q  105 ggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||||||||||||||          ||||||||||||||||||||| |||||||||| || |||||||| ||||||||| ||||||||||||||    
T  12913329 ggattgtttaataaat----------tggattttgtgggattttctagtgaaattttaacaagaaaaagtatttcatgaagacatgagatttctt 12913413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 12 - 177
Target Start/End: Original strand, 25446062 - 25446227
Alignment:
Q  12 tttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgt 111  Q
    |||||||||| |||||| ||||| ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||| ||||||    
T  25446062 tttgtcatttaaaaaaattcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgt 25446161  T
Q  112 ttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctt 177  Q
    |||||||||  |||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  25446162 ttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 71 - 199
Target Start/End: Original strand, 48261198 - 48261326
Alignment:
Q  71 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaa 170  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || ||||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  171 aagtctttcatgaaaacatgagatttctt 199  Q
    || ||||||||||||| ||||||||||||    
T  48261298 aaatctttcatgaaaatatgagatttctt 48261326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 36479436 - 36479249
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||       |||| |||||||||||||| ||||||||||    
T  36479436 aatcaaaactctttgtcattttaaaaaagtcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattcaaaattattcaaattt 36479337  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||||||| ||||||||||||||||||||||||||||           || |||||||||||||  ||||||||||| ||||||||||||||||||||    
T  36479336 cgaaggattatttaataaattggattttgatggatttt-----------tagtgaaattttagcaaaaaaaagtcttttatgaaaacatgagatttctt 36479249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 49835018 - 49834890
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  49835018 aatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 49834919  T
Q  101 cgaaggattgtttaataaattggattttg 129  Q
    |||||||||||||||||||||||||||||    
T  49834918 cgaaggattgtttaataaattggattttg 49834890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 30967504 - 30967365
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||       ||||||||||||||||||||||||||||||    
T  30967504 aatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 30967405  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgt 140  Q
    | |||||||||||||||||||||||||||  |||||||||    
T  30967404 caaaggattgtttaataaattggattttgtgggattttgt 30967365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 50018252 - 50018391
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||       |||||||||||||||| |||||||||||||    
T  50018252 aatcaagactctttgtcattttaaaaaagtcttgaggtattccatcaagacttttcttcatttaaaaaaagtcttgtggtattcaagatcattcaaattt 50018351  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgt 140  Q
     ||||||||||||||||||||| ||||| |||||||||||    
T  50018352 tgaaggattgtttaataaattgaattttaatggattttgt 50018391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 31314933 - 31314742
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| |||||||||    |||| || |||| ||       |||| |||||||||||||||||||||||||    
T  31314933 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa----gactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 31314838  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  |||||||          |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31314837 cgaaggattgtttaataaatcagattttg----------tgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 31314748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 40537350 - 40537161
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||| ||| || |||| ||           ||||||||||||||||||| ||||||    
T  40537350 aatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaa-----tgtggtattcaaaatcatttaaattt 40537256  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    |||| |||||||||||||||  ||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40537255 cgaatgattgtttaataaatctgattttgatggattttgtgg----------tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 40537166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 24131177 - 24130981
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| ||||||||||||          |||    
T  24131177 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa----------ttt 24131088  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatg-aaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||| |||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  24131087 cgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaacatgagatttctt 24130988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 32684188 - 32684065
Alignment:
Q  5 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 104  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  32684188 aagattctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcatttaaaaaa-gtcttgtggtattcaaaatcattcaaatttcgaa 32684090  T
Q  105 ggattgtttaataaattggattttg 129  Q
    |||||||||||||||||||||||||    
T  32684089 ggattgtttaataaattggattttg 32684065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 12 - 206
Target Start/End: Original strand, 53275851 - 53276046
Alignment:
Q  12 tttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgt 111  Q
    |||||||||| ||||||||||||  |||||||||||||| |||| |||| ||       |||| ||| |||| |||||||||||||||||||||||||||    
T  53275851 tttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgt 53275950  T
Q  112 ttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttca-tgaaaacatgagatttcttaggattg 206  Q
     ||||||||  ||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||| | ||||| | |||||| |||||||||    
T  53275951 gtaataaatcagattttgatggattttgtgagattttctaataaaattttagcatgaaaaagtctttcattaaaaactttagattttttaggattg 53276046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 7249900 - 7249795
Alignment:
Q  71 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaa 170  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 7249801  T
Q  171 aagtct 176  Q
    ||||||    
T  7249800 aagtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 49501716 - 49501588
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||       ||||||||| ||||||||||||||||||||    
T  49501716 aatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaattt 49501617  T
Q  101 cgaaggattgtttaataaattggattttg 129  Q
    |||| ||||||||||||||||||||||||    
T  49501616 cgaatgattgtttaataaattggattttg 49501588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 49507781 - 49507653
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||       ||||||||| ||||||||||||||||||||    
T  49507781 aatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaattt 49507682  T
Q  101 cgaaggattgtttaataaattggattttg 129  Q
    |||| ||||||||||||||||||||||||    
T  49507681 cgaatgattgtttaataaattggattttg 49507653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 28370925 - 28371086
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||| |||||||||| |||||||||||||||||| ||||||||||| |||||| |||| ||       ||||  ||||||||||||||||||||||||    
T  28370925 aatcaaaactctttgtcgttttaaaaaagtcttgagatattcaatcaaaactttttatcacttaaataaagtctcatggtattcaaaatcattcaaattt 28371024  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaatttta 162  Q
      |||||||||||||||||||| |||||| || |||||||||||||||||| ||||||||||    
T  28371025 taaaggattgtttaataaattgaattttggtgaattttgtgggattttctagtgaaatttta 28371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 76 - 206
Target Start/End: Complemental strand, 27454208 - 27454078
Alignment:
Q  76 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtc 175  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||  |||||||||| ||||||||| |||||||| ||||||||| |||||||||||||    
T  27454208 gtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaagtc 27454109  T
Q  176 tttcatgaaaacatgagatttcttaggattg 206  Q
    |||||||||||||| | |||| ||| |||||    
T  27454108 tttcatgaaaacataatatttgttaagattg 27454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 28483923 - 28484039
Alignment:
Q  24 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 123  Q
    ||||||||||||||||||||||||||||||||||||| ||       |||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  28483923 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 28484022  T
Q  124 attttgatggattttgt 140  Q
    ||||||  |||||||||    
T  28484023 attttgtaggattttgt 28484039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 23464956 - 23465117
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| || ||||||||| |||||||| |||   ||||||||||||||| || |||| ||       |||| ||||||||||||| |||||||||||    
T  23464956 aatcaagattccttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaatcacttaaaataagtctagtggtattcaaaaccattcaaattt 23465055  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaatttta 162  Q
    ||||||||||||||||||||  || |||||||||||||||||||||||||| | ||||||||    
T  23465056 cgaaggattgtttaataaatcagaatttgatggattttgtgggattttctagttaaatttta 23465117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 112 - 199
Target Start/End: Original strand, 8711978 - 8712065
Alignment:
Q  112 ttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||| |||||||||||||||||    
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttctt 8712065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 199
Target Start/End: Original strand, 24736447 - 24736534
Alignment:
Q  112 ttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||| || ||| |||||||||||||||||||||||||||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttctt 24736534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 25504844 - 25504696
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||||  |||||| |||||| ||||| | ||||||||||||||| || |||| ||       |||  ||| |||||||||||||||||||||    
T  25504844 aatcaagattcttgatcatttaaaaaaattcttgtgatattcaatcaagactcttaatcacttaaaaaaagtccagtgatattcaaaatcattcaaattt 25504745  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttc 149  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  25504744 cgaaggattgtttaataaatcagattttgatggattttgtgggattttc 25504696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 41581991 - 41581795
Alignment:
Q  3 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 102  Q
    |||||||  ||||||||||||||||||||||| |||||||| | |||| ||||| | | ||       |||| |||||||| | | |||||||||||| |    
T  41581991 tcaagacattttgtcattttaaaaaagtcttgtggtattcagttaagaattttcttaacttaaaaaaagtctcgtggtatttagagtcattcaaattttg 41581892  T
Q  103 aaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatg-aaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||  ||||||||||||||||||||  |||  |||||||||||||||||| |||||||||| |||| ||||| | ||||||| |||||||||||||||||    
T  41581891 aataattgtttaataaattggatt--gatatattttgtgggattttctagtgaaattttaacatgaaaaaaatatttcatgtaaacatgagatttctta 41581795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 5799978 - 5800107
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatt 99  Q
    ||||||||||||||||||||||||||||   |||| |||||  ||||| ||||||||||| ||        |||||||||||||||||||||||||||||    
T  5799978 aatcaagactctttgtcattttaaaaaaaatttgatgtatttcatcaaaacttttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaatt 5800077  T
Q  100 tcgaaggattgtttaataaattggattttg 129  Q
    || |||||||||||||||||||||||||||    
T  5800078 tcaaaggattgtttaataaattggattttg 5800107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 56445474 - 56445362
Alignment:
Q  77 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtct 176  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||          |||||||||||||||| ||||| ||||||| ||||||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggat----------tttgtgggattttctagtgaaactttagcaagaaaaagtct 56445385  T
Q  177 ttcatgaaaacatgagatttctt 199  Q
    ||||| || ||||||||||||||    
T  56445384 ttcataaagacatgagatttctt 56445362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 11090435 - 11090510
Alignment:
Q  131 tggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 206  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||| || ||||||||||||||||||||||||    
T  11090435 tggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattg 11090510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 20021345 - 20021531
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||| ||       ||||  | ||          ||||||||||    
T  20021345 aatcaagattctttgtcattttaaaaaaatcttgaagtattcaatcaagacttttcatcactt-aaaaaagtctcattgt----------attcaaattt 20021433  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagc-atgaaaaagtctttcatgaaaacatgagatttc 197  Q
      ||||||||||||||||||| ||||||| |||||||| ||||||||| || |||||||||| | |  ||||| ||||||||||| |||| |||||||    
T  20021434 taaaggattgtttaataaattagattttgctggattttatgggattttttaatgaaattttaacaaaaaaaaaatctttcatgaagacataagatttc 20021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 198
Target Start/End: Complemental strand, 13400942 - 13400814
Alignment:
Q  72 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaa--taaattggattttgatggattttgtgggattttctactgaaattttagcatgaa 169  Q
    |||||| ||||| |||| ||||| ||||| || |||| ||||||  |||||||| |||||||| |||||||| |||||| || ||||| |||  ||| ||    
T  13400942 tcttgtagtattgaaaaacattctaattttgagggatagtttaaaataaattgggttttgatgaattttgtgagattttttaatgaaaatttttcataaa 13400843  T
Q  170 aaagtctttcatgaaaacatgagatttct 198  Q
    ||| ||||  || ||||||||||||||||    
T  13400842 aaaatcttctattaaaacatgagatttct 13400814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 30967384 - 30967316
Alignment:
Q  131 tggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||| || || ||||||| || |||||| ||||||||||||| || |||||||||    
T  30967384 tggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaaataagatttctt 30967316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 37915786 - 37915837
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||| ||||||| || |||||||||||| |||||||||||||||||    
T  37915786 aatcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaagact 37915837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11090350 - 11090408
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatc 59  Q
    |||||||| |||||| || || |||||||| ||| ||||||||||||||||||||||||    
T  11090350 aatcaagaatctttgccacttaaaaaaagttttgtggtattcaatcaagacttttcatc 11090408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29855682 - 29855728
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatca 47  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||||    
T  29855682 aatcaagactgtttgtcattttaaaaaaattttgaggtattcaatca 29855728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 37915744 - 37915798
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    |||||||||| ||||| | || |||||||||||| ||||||||||||||||||||    
T  37915744 aatcaagactttttgtaacttaaaaaaagtcttgtggtattcaatcaagactttt 37915798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 55047742 - 55047641
Alignment:
Q  96 aatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 195  Q
    |||| ||| |||||||||| ||||||| |||||||| ||||   || |||||| || | || |||||  ||||||||||||||||||||||||||| |||    
T  55047742 aattacgagggattgtttactaaattgaattttgatagattcgttgagatttt-taataaatttttacaatgaaaaagtctttcatgaaaacatgatatt 55047644  T
Q  196 tct 198  Q
    |||    
T  55047643 tct 55047641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 198
Target Start/End: Original strand, 12193135 - 12193227
Alignment:
Q  106 gattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 198  Q
    ||||||||||||| ||| |||||| |||||||||||||| | | || |||| ||| ||||| ||||| |||| ||| ||||||  ||||||||    
T  12193135 gattgtttaataagttgaattttggtggattttgtgggaatatttagtgaattttcagcataaaaaaatcttacattaaaacacaagatttct 12193227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 40143822 - 40143858
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||||||||| |||||||||||||||||||||    
T  40143822 ttttaaaaaagtctttaggtattcaatcaagactttt 40143858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 54509760 - 54509796
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||||||||| |||||||||||||||||||||    
T  54509760 ttttaaaaaagtctttaggtattcaatcaagactttt 54509796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 5441363 - 5441414
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  5441363 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 5441414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 30967546 - 30967495
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  30967546 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 30967495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 41320788 - 41320830
Alignment:
Q  10 tctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    ||||| |||||| |||||||||||| |||||||||||||||||    
T  41320788 tctttatcatttaaaaaaagtcttgtggtattcaatcaagact 41320830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20021303 - 20021352
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 50  Q
    |||||||||||||||  |||| |||||||| ||| |||||||||||||||    
T  20021303 aatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaaga 20021352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 28100617 - 28100584
Alignment:
Q  22 taaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||||||| ||||||||||||||||||||    
T  28100617 taaaaaagtcttgtggtattcaatcaagactttt 28100584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41881330 - 41881281
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 50  Q
    ||||||||||||||   ||||||||||||||||| | |||||||||||||    
T  41881330 aatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaaga 41881281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 50018189 - 50018222
Alignment:
Q  22 taaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||||||| ||||||||||||||||||||    
T  50018189 taaaaaagtcttgtggtattcaatcaagactttt 50018222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 26336123 - 26336159
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  26336123 ttttaaaaatgtctttaggtattcaatcaagactttt 26336159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 32684058 - 32684018
Alignment:
Q  156 aattttagcatgaaaaagtctttcatgaaaacatgagattt 196  Q
    ||||||| || |||||||||||||||||||| |||||||||    
T  32684058 aattttaacaagaaaaagtctttcatgaaaagatgagattt 32684018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 40537388 - 40537307
Alignment:
Q  5 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaa 86  Q
    |||||||||| | |||| |||||||||||| | ||||||||||||||| ||  ||||||       ||||||||||||||||    
T  40537388 aagactctttctaatttaaaaaaagtcttgtgttattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaa 40537307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 41762017 - 41762061
Alignment:
Q  11 ctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    |||||| ||| ||||||||||||| |||||| |||||||||||||    
T  41762017 ctttgtgattataaaaaagtcttgtggtattgaatcaagactttt 41762061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 47685190 - 47685226
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    |||||||||| |||| |||||||||||||||||||||    
T  47685190 ttttaaaaaaatctttaggtattcaatcaagactttt 47685226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 154; Significance: 1e-81; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 29396593 - 29396395
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  29396593 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 29396494  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  29396493 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 29396395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 51701575 - 51701770
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  51701575 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 51701674  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| |||||||||    
T  51701675 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 51701770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 6312573 - 6312767
Alignment:
Q  5 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  6312573 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 6312672  T
Q  105 ggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  6312673 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6312767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 25612152 - 25612350
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||    
T  25612152 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 25612251  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    | |||||||||||||||||||||||||||||||||||||||||||||| || |  ||||||| || |||||||||||||||||||| ||||||||||||    
T  25612252 caaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcatgaaaagatgagatttctt 25612350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 21222142 - 21222347
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| | |||||||||||||||||||||||    
T  21222142 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaatcattcaaattt 21222241  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21222242 cgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 21222341  T
Q  201 ggattg 206  Q
    ||||||    
T  21222342 ggattg 21222347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 9322705 - 9322507
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       ||| ||||||||||||||||||||||||||    
T  9322705 aatcaagactctttgtcattttaaaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtattcaaaatcattcaaattt 9322606  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
     ||||||||||||||||||||| ||||||||||||||| ||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  9322605 agaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 9322507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 15835258 - 15835060
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||||||     
T  15835258 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaattg 15835159  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    | |||||||||||||||||||||||||||||||||||| ||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  15835158 caaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 15835060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 48177667 - 48177469
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||       ||||||||||||||||||||||||||||||    
T  48177667 aatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 48177568  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  48177567 cgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 48177469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 9577637 - 9577432
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||| |||||||||||||||||||||||||| |||| |||||| |||||| |||| ||       |||||||| |||||||||||||||||||||    
T  9577637 aatcaagaccctttgtcattttaaaaaagtcttgagatattaaatcaaaactttttatcacttaaaaaaagtcttgtgatattcaaaatcattcaaattt 9577538  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
     |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||     
T  9577537 agaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaaaaatctttcatgaaaacatgagatttcttg 9577438  T
Q  201 ggattg 206  Q
    ||||||    
T  9577437 ggattg 9577432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 19452013 - 19451808
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| |||||| |||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  19452013 aatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 19451914  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19451913 cgaaggatcgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 19451814  T
Q  201 ggattg 206  Q
     |||||    
T  19451813 tgattg 19451808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 46328037 - 46328234
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||| |||||||||||||||||||||||||    
T  46328037 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaaatcattcaaattt 46328136  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 198  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || || ||||||| || ||||||||||||||| |||| || ||||||||    
T  46328137 cgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagataagatttct 46328234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 28387598 - 28387400
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||| ||||||||||||    
T  28387598 aatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaattcattcaaattt 28387499  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |  ||||||| ||  |||||||||||||| |||| ||||||||||||    
T  28387498 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaaaagatgagatttctt 28387400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 50192756 - 50192550
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatt 99  Q
    |||||||| || |||||||||||||||||||||| ||||||||||||||||| || |||| ||        |||| ||||||||||||||||||||||||    
T  50192756 aatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatt 50192657  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    | |||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  50192656 ttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttttt 50192557  T
Q  200 aggattg 206  Q
    |||||||    
T  50192556 aggattg 50192550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 35279667 - 35279872
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||| ||||||    
T  35279667 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaaaatcatttaaattt 35279766  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||    
T  35279767 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacatgagatttctta 35279866  T
Q  201 ggattg 206  Q
    | ||||    
T  35279867 gaattg 35279872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 6304458 - 6304252
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga-cttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 99  Q
    |||||||| |||||||||||| |||||||||||| ||||||||| ||| | || || |||| ||       |||| ||||||||||||||||||||||||    
T  6304458 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 6304359  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  6304358 tcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttctt 6304259  T
Q  200 aggattg 206  Q
    | |||||    
T  6304258 atgattg 6304252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 45760215 - 45760009
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 99  Q
    |||||||| ||||||||| ||||||||| ||| || ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||| |    
T  45760215 aatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaact 45760116  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  45760115 tcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatgaaaacatgagatttctt 45760016  T
Q  200 aggattg 206  Q
    |||||||    
T  45760015 aggattg 45760009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 28824577 - 28824373
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| | |||||||||| |||||||||||| ||||||||||||||||| || |||| ||       ||||||||||||||||||||||||||||||    
T  28824577 aatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaaaatcattcaaattt 28824478  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||| ||||||||||||||  |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| || ||||||||||||||||||    
T  28824477 cgaag-attgtttaataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaacatgagatttctta 28824379  T
Q  201 ggattg 206  Q
    ||||||    
T  28824378 ggattg 28824373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 35679333 - 35679128
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||| |||||  |||||||||||||||| || |||| ||       ||| ||||||||||||||||||||||||||    
T  35679333 aatcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattcaaaatcattcaaattt 35679234  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  |||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  35679233 cgaaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaagacatgagatttctta 35679134  T
Q  201 ggattg 206  Q
     |||||    
T  35679133 agattg 35679128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 49198473 - 49198269
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||| ||| |||||||||| |||||| || |||| ||       ||   |||||||||||||||||||||||||    
T  49198473 aatcaagattctttgtcatttaaaaaaagttttgtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggtattcaaaatcattcaaattt 49198375  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  49198374 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctta 49198275  T
Q  201 ggattg 206  Q
    ||||||    
T  49198274 ggattg 49198269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 32589158 - 32588963
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||| |||||  | || | ||||| || |||||||||||||| ||||||| ||       ||||||||||||||||||||||||||||||    
T  32589158 aatcaagactctttatcattaaacaagaatcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggtattcaaaatcattcaaattt 32589059  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 196  Q
     ||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  32589058 tgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaattttagcataaaaaagtctttcatgaaaacatgagattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 47654557 - 47654351
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatt 99  Q
    |||||||| |||||||||||| ||| |||||||| ||||||||||||| ||| || |||| ||        |||| |||||||||||||| |||||||||    
T  47654557 aatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaattattcaaatt 47654458  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||    
T  47654457 tcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaaacatgagatttctt 47654358  T
Q  200 aggattg 206  Q
    |||||||    
T  47654357 aggattg 47654351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 5 - 206
Target Start/End: Complemental strand, 37014841 - 37014640
Alignment:
Q  5 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 104  Q
    |||||||||||||||||  || |||||||| ||||||||||||| | | ||||||| ||       |||||||| |||||||||||||||||||||| ||    
T  37014841 aagactctttgtcatttagaagaagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttctaa 37014742  T
Q  105 ggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 204  Q
     |||||||| |||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||| |||    
T  37014741 agattgttttataaattgaattttgatggattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaaacatgagatttcttaagat 37014642  T
Q  205 tg 206  Q
    ||    
T  37014641 tg 37014640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 18798486 - 18798614
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  18798486 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 18798585  T
Q  101 cgaaggattgtttaataaattggattttg 129  Q
    |||||||||||||||||||||||||||||    
T  18798586 cgaaggattgtttaataaattggattttg 18798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 45535939 - 45536150
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||| | |||||||||||| || ||||| ||| ||||||||||||||||| || |||  ||       |||| |||||||||||||||||||||||||    
T  45535939 aatcaatattctttgtcatttaaacaaagtgttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaattt 45536038  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcat------gaaaacatgagat 194  Q
    |||| |||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||      |||||||||||||    
T  45536039 cgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacgaaaacatgagat 45536138  T
Q  195 ttcttaggattg 206  Q
    ||||||||||||    
T  45536139 ttcttaggattg 45536150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 49418079 - 49418279
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| || ||||||||| |||||| |  || |||||||||| |||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  49418079 aatcaagattcattgtcatttaaaaaaaattatgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 49418178  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    | ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||    
T  49418179 caaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaattttagcatgaaaaaatctttcatgaaaatatgagatttctta 49418278  T
Q  201 g 201  Q
    |    
T  49418279 g 49418279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 47780706 - 47780911
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| | | |||||||| ||||||||| || ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||| ||    
T  47780706 aatcaagattatatgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaaatt 47780805  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
      ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||    
T  47780806 aaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttctta 47780905  T
Q  201 ggattg 206  Q
     |||||    
T  47780906 agattg 47780911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 38536294 - 38536106
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||       ||||||||||||||||||| ||||||||||    
T  38536294 aatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaattt 38536195  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    | |||||||||||||||||||||||||||||||||||||          || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  38536194 caaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 38536106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 38558512 - 38558324
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||       ||||||||||||||||||| ||||||||||    
T  38558512 aatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaattt 38558413  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    | |||||||||||||||||||||||||||||||||||||          || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  38558412 caaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 38558324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 29556111 - 29556305
Alignment:
Q  13 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 112  Q
    |||| |||| |||||||||||| | ||||||||||||||| || |||| ||        ||| ||| ||||||||||||||||||||||||| |||||||    
T  29556111 ttgttatttaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaaatctagtgttattcaaaatcattcaaatttcgaaagattgtt 29556210  T
Q  113 taataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaa-acatgagatttcttaggattg 206  Q
    ||||||||| |||||||||||||||| |||||||||||| |||||||||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  29556211 taataaattagattttgatggattttatgggattttctaatgaaattttagcttgaaaaagtcttttatgaaacacatgagatttcttaggattg 29556305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 74 - 206
Target Start/End: Complemental strand, 31572329 - 31572197
Alignment:
Q  74 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaag 173  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  31572329 ttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaag 31572230  T
Q  174 tctttcatgaaaacatgagatttcttaggattg 206  Q
    |||||||||||| ||||||||||||||| ||||    
T  31572229 tctttcatgaaatcatgagatttcttagaattg 31572197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 49230881 - 49231008
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  49230881 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 49230980  T
Q  101 cgaaggattgtttaataaattggatttt 128  Q
    ||||||||| ||||||||||||||||||    
T  49230981 cgaaggattatttaataaattggatttt 49231008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 29219283 - 29219469
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||     
T  29219283 aatcaagactct--gtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatta 29219380  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
     ||||||||||||||||||||||||||||||||||||||| |          || ||||||| || |||||||| ||||||||||| ||||||||||||    
T  29219381 agaaggattgtttaataaattggattttgatggattttgtag----------tgtaattttaacaagaaaaagtatttcatgaaaagatgagatttctt 29219469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 730143 - 730314
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatt 99  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||        |||| ||||||||||||||||||||||||    
T  730143 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatt 730242  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaa 171  Q
    |||| | ||||||||||||||  ||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  730243 tcgacgaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaa 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 5495297 - 5495162
Alignment:
Q  5 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||| |||||||||||||||||| ||||||| ||    
T  5495297 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcatttaaatttcaaa 5495198  T
Q  105 ggattgtttaataaattggattttgatggattttgt 140  Q
    ||||| |||||||||||||||||||  |||||||||    
T  5495197 ggattatttaataaattggattttgtgggattttgt 5495162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 48524314 - 48524490
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| | |||||||||| |||||| || || |||||| |||||| ||| || |||| ||       |||||||| |||||||||||||||||||||    
T  48524314 aatcaagattttttgtcatttaaaaaaattcatgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgatattcaaaatcattcaaattt 48524413  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctt 177  Q
     ||| |||||||||||||||  | ||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  48524414 tgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 33025507 - 33025703
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga-cttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 99  Q
    |||||||| |||||| |||||| ||||| ||||| ||||||||||||| | || || |||| ||       |||||||||||||||||||||||||||||    
T  33025507 aatcaagattctttgacatttttaaaaattcttgtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 33025606  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    | |||||||||||||||| ||  ||||          ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  33025607 ttgaaggattgtttaatacatcagatt----------ttgtgggattttctaataaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 33025696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 48668977 - 48668785
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    ||||||||| ||       |||  |||||||||||||| ||||||||||    
T  48668977 aatcaagactctttgtcattttaaaaaagttttgaggtattcaatcat---ttttcatcacttaaaaaaagtcacgtggtattcaaaattattcaaattt 48668881  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    |||| ||||||||||||||||||||          ||||||||||| | || || ||||||| || |||||||||||||||||||| ||||||||| ||     
T  48668880 cgaaagattgtttaataaattggat----------tttgtgggattctgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttgttg 48668791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 45272582 - 45272708
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||        ||| |||||||||||||| ||| ||||||    
T  45272582 aatcaaaactctttgtcattttaaaa-agtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatctcgtggtattcaaaattatttaaattt 45272680  T
Q  101 cgaaggattgtttaataaattggattttg 129  Q
    ||||||| |||||||||||||||||||||    
T  45272681 cgaagga-tgtttaataaattggattttg 45272708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 8141333 - 8141243
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||       |||||| ||||||||||||||    
T  8141333 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactattcatcacttaaaaaaagtcttgaggtattcaaaatca 8141243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 51085860 - 51085951
Alignment:
Q  71 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaatttta 162  Q
    |||| |||||||||||||| |||||||||| |||||||| || ||||||||||||||||||| ||||||||| |||||||  ||||||||||    
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattttcttgtgaaatttta 51085951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 47784382 - 47784509
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||||||       ||||||||||||||||||| ||||||| ||    
T  47784382 aatcaagactttttgcaagttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttaaaaaa-gtcttgtggtattcaaaattattcaaactt 47784480  T
Q  101 cgaaggattgtttaataaattggattttg 129  Q
    | || ||||||||||||||||||||||||    
T  47784481 ctaaagattgtttaataaattggattttg 47784509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 955823 - 955882
Alignment:
Q  79 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 138  Q
    |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 22183365 - 22183457
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 93  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||| | || |||| ||       |||| ||||||||||||||||||    
T  22183365 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 22183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 129
Target Start/End: Complemental strand, 31622591 - 31622536
Alignment:
Q  74 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 129  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  31622591 ttgttgtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 198
Target Start/End: Original strand, 38319996 - 38320098
Alignment:
Q  96 aatttcgaaggattgtttaataaattggattttgatggattttgt-gggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagat 194  Q
    ||||| ||| ||||||||| ||||| |||||||||| |||||||| ||| |||| || |||| ||||||||  ||||||||||||||||||| |||| ||    
T  38319996 aattttgaatgattgtttactaaataggattttgatagattttgttgggtttttttagtgaa-ttttagcacaaaaaagtctttcatgaaaatatgatat 38320094  T
Q  195 ttct 198  Q
    ||||    
T  38320095 ttct 38320098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 953814 - 953865
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||| |||||||||||| |||||||||||| ||||||| |||||||||    
T  953814 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaagact 953865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 43885203 - 43885157
Alignment:
Q  93 tcaaatttcgaaggattgtttaataaattggattttgatggattttg 139  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||    
T  43885203 tcaaattttgaatgattatttaataaattggattttgatggattttg 43885157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 10896845 - 10896882
Alignment:
Q  18 attttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  10896845 attttaaaaaagtctttaggtattcaatcaagactttt 10896882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 48524805 - 48524842
Alignment:
Q  169 aaaagtctttcatgaaaacatgagatttcttaggattg 206  Q
    |||||||||||||||||||||||||||| |||||||||    
T  48524805 aaaagtctttcatgaaaacatgagatttgttaggattg 48524842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 1928442 - 1928406
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||||||||| |||||||||||||||||||||    
T  1928442 ttttaaaaaagtctttaggtattcaatcaagactttt 1928406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 5495181 - 5495117
Alignment:
Q  131 tggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 195  Q
    |||||||||||||||||| || || ||||||| || ||||||||| || ||||||| ||||||||    
T  5495181 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 36402293 - 36402329
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36402293 ttttaaaaaagtctttaggtattcaatcaagactttt 36402329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15835300 - 15835249
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  15835300 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 15835249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 19452097 - 19452046
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    ||||||||||||||   |||| |||||||||||| |||||||||||||||||    
T  19452097 aatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaagact 19452046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25612110 - 25612161
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  25612110 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 25612161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 18798621 - 18798663
Alignment:
Q  156 aattttagcatgaaaaagtctttcatgaaaacatgagatttct 198  Q
    ||||||| || |||||||||||||||||||| |||||||||||    
T  18798621 aattttaacaagaaaaagtctttcatgaaaagatgagatttct 18798663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28824619 - 28824570
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 50  Q
    |||||||||||||| | |||| |||||||||||| | |||||||||||||    
T  28824619 aatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaaga 28824570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 49198514 - 49198466
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 50  Q
    |||||||||||||| ||| ||||||||||||||| | |||||||||||||    
T  49198514 aatcaagactcttt-tcaatttaaaaaagtcttgtgttattcaatcaaga 49198466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 29208801 - 29208837
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  29208801 ttttaaaaatgtctttaggtattcaatcaagactttt 29208837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 33243348 - 33243312
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    |||||||||||| || |||||||||||||||||||||    
T  33243348 ttttaaaaaagtttttaggtattcaatcaagactttt 33243312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 33263521 - 33263485
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    |||||||||||| || |||||||||||||||||||||    
T  33263521 ttttaaaaaagtttttaggtattcaatcaagactttt 33263485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 42657763 - 42657795
Alignment:
Q  22 taaaaaagtcttgaggtattcaatcaagacttt 54  Q
    ||||||||||||| |||||||||||||||||||    
T  42657763 taaaaaagtcttgtggtattcaatcaagacttt 42657795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 14782339 - 14782141
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  14782339 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 14782240  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  14782239 tgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 14782141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 44726014 - 44725816
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  44726014 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 44725915  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  44725914 tgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 44725816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 26374634 - 26374405
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  26374634 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 26374535  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26374534 cgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 26374435  T
Q  201 ggattgnnnnnnncttttaaaattttacta 230  Q
    ||||||       |||||||||||||||||    
T  26374434 ggattgtttttttcttttaaaattttacta 26374405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 19718085 - 19717887
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  19718085 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 19717986  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||| || || ||||||| || |||||||||||| ||||||| ||||||||||||    
T  19717985 cgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttctt 19717887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 24502017 - 24501812
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||||| |||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  24502017 aatcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 24501918  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24501917 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 24501818  T
Q  201 ggattg 206  Q
    ||||||    
T  24501817 ggattg 24501812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 18958931 - 18958736
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  18958931 aatcaagactctttatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 18958832  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 196  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| || || ||||||| || |||||||||||||||||||| || ||||||    
T  18958831 cgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagattagattt 18958736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 39467672 - 39467477
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  39467672 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 39467573  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 196  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||| || || ||||||| || |||||| ||||||||||||| |||||||||    
T  39467572 cgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagattt 39467477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 9288661 - 9288463
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||       ||||||||||||||||||||||||||||||    
T  9288661 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 9288562  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  9288561 cgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 9288463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 42938321 - 42938116
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| | |||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  42938321 aatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 42938222  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  42938221 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgagatttctta 42938122  T
Q  201 ggattg 206  Q
    ||||||    
T  42938121 ggattg 42938116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 2705023 - 2704818
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  2705023 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 2704924  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    |||| |||||||||||||||   |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2704923 cgaatgattgtttaataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaaacatgagatttctta 2704824  T
Q  201 ggattg 206  Q
    ||||||    
T  2704823 ggattg 2704818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 10392441 - 10392237
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||||||||||||||||||| ||||| | |||||||||||||||||| |||| ||       |||| |||||||||| ||||||||||||||    
T  10392441 aatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattcaaattt 10392342  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||    
T  10392341 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttatta 10392242  T
Q  201 ggatt 205  Q
    |||||    
T  10392241 ggatt 10392237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 10295585 - 10295386
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  10295585 aatcaagactcttcgtcacttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 10295486  T
Q  101 cgaaggattgtttaataaattggattttgatgga-ttttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  10295485 cgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 10295386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 26856068 - 26856267
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtctt-gaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||    
T  26856068 aatcaagactctttgtcattttaaaaaagtctttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 26856167  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| || || ||||||| || ||||||||||||||  |||| || |||||||||    
T  26856168 tcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaaaataagatttctt 26856267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 5576825 - 5576619
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatt 99  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||        |||  ||||||||||||||||||||||||    
T  5576825 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggtattcaaaatcattcaaatt 5576726  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||| |||||||||||||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  5576725 tcgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttctt 5576626  T
Q  200 aggattg 206  Q
    |||||||    
T  5576625 aggattg 5576619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 42937355 - 42937558
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| | |||||||||| |||||||||||| |||||||||||  |||| || |||| ||       |||| |||||||||||||||||||||||||    
T  42937355 aatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 42937452  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  42937453 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaacatgagatttctta 42937552  T
Q  201 ggattg 206  Q
     |||||    
T  42937553 tgattg 42937558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 7507091 - 7506898
Alignment:
Q  13 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 112  Q
    ||||||||| | |||||||||| ||||||||||||||||| || |||| ||       |||| ||||||||||||| ||||||||||| |||||||||||    
T  7507091 ttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaaattttgaaggattgtt 7506992  T
Q  113 taataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 206  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7506991 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatgagatttcttaggattg 7506898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 23115372 - 23115168
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| ||||| |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||| ||||||||||||    
T  23115372 aatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa-tcattcaaattt 23115274  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
     |||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  23115273 ggaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaacatgagattcctta 23115174  T
Q  201 ggattg 206  Q
    ||||||    
T  23115173 ggattg 23115168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 42735481 - 42735276
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||||| |||||| ||||||| |||| |||||||||| |||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  42735481 aatcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 42735382  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||    
T  42735381 cgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaaaacatgagatttctta 42735282  T
Q  201 ggattg 206  Q
    ||||||    
T  42735281 ggattg 42735276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 4403109 - 4403314
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||| || ||||||||||||| |||||| ||||||||| |||| ||||||||| ||        ||| |||||||||||||||||||||||||    
T  4403109 aatcaagactcattttcattttaaaaaaatcttgaagtattcaattaagatttttcatcacttaaaaaaaatctcgtggtattcaaaatcattcaaattt 4403208  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||     
T  4403209 cgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttcttg 4403308  T
Q  201 ggattg 206  Q
    ||||||    
T  4403309 ggattg 4403314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 18306165 - 18305977
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  18306165 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 18306066  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||| |||||||||||||||          |||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  18306065 cgaaagattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 18305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 43166894 - 43166696
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||       ||||||||||||||||||||||||||||||    
T  43166894 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaatcattcaaattt 43166795  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |  || ||||||| || |||||||| ||||||||||| ||||||||||||    
T  43166794 cgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttctt 43166696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 16362198 - 16362337
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||       |||| |||||||||||||||||||||||||    
T  16362198 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaaaatcattcaaattt 16362297  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgt 140  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16362298 cgaaggattgtttaataaattggattttgatggattttgt 16362337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 31623697 - 31623825
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  31623697 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 31623796  T
Q  101 cgaaggattgtttaataaattggattttg 129  Q
    |||||||||||||||||||||||||||||    
T  31623797 cgaaggattgtttaataaattggattttg 31623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 7466337 - 7466525
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||       ||||||||||||||||||||||||||||||    
T  7466337 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaattt 7466436  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
     |||| ||||||||||||||          |||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  7466437 tgaagaattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 7466525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 32497527 - 32497715
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  32497527 aatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 32497626  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||| |||||||||||||||          |||||||||||||||||| || || ||||||| || || ||||||||||||||||| ||||||||||||    
T  32497627 cgaatgattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgagatttctt 32497715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 42305989 - 42305850
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||| ||||||||||    
T  42305989 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaataattcaaattt 42305890  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgt 140  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  42305889 cgaaggattgtttaatcaattggattttaatggattttgt 42305850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 4031462 - 4031334
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||       ||||||||||||||||||||||||||||||    
T  4031462 aatcaagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggtattcaaaatcattcaaattt 4031363  T
Q  101 cgaaggattgtttaataaattggattttg 129  Q
    |||||||||||||||||||||||||||||    
T  4031362 cgaaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 41479099 - 41479294
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       ||||  ||||||||||||||||||||||||    
T  41479099 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaattt 41479198  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    |||| |||||||||||||||  ||||          ||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||    
T  41479199 cgaatgattgtttaataaatcagatt----------ttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgagatttctta 41479288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 43959660 - 43959854
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||||||||||||||||||||||||| | ||||||||||||| | || |||| ||       | || |||||||||||||||||||||||||    
T  43959660 aatcaagattctttgtcattttaaaaaagtcttgtg-tattcaatcaagattcttaatcacttcaaaaaagactagtggtattcaaaatcattcaaattt 43959758  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    |||| |||||||||||||||  ||||||||||||||||||||          |||||||||||||||||||||||||| || ||||||||||||||||||    
T  43959759 cgaatgattgtttaataaatcagattttgatggattttgtgg----------tgaaattttagcatgaaaaagtctttaattaaaacatgagatttctta 43959848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 39190017 - 39189815
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||  |||| |||||||||||| |||||||||| || ||| || |||||||       ||||  || ||||||| |||||||||||||    
T  39190017 aatcaagactctttgcaatttaaaaaaagtcttgtggtattcaataaaaactctttatcatttaaaaaaagtctcatg-tattcaacatcattcaaattt 39189919  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||| || ||||||||||||||  | |||||||| | |||||||| || |||||| ||||||||||||||||||||||||||     
T  39189918 cgaaggattgtttaataaatt-gaatttgatggattttgatgaattttctagt-aaattttaacaagaaaaaatctttcatgaaaacatgagatttcttg 39189821  T
Q  201 ggattg 206  Q
    ||||||    
T  39189820 ggattg 39189815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 71 - 200
Target Start/End: Complemental strand, 4950150 - 4950021
Alignment:
Q  71 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaa 170  Q
    |||||| ||||||||||||||||||| |||| || |||| ||||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  4950150 gtcttggggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaattttagcatgaaa 4950051  T
Q  171 aagtctttcatgaaaacatgagatttctta 200  Q
    || | ||||||| |||||| ||||||||||    
T  4950050 aaatatttcatgcaaacataagatttctta 4950021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 32711486 - 32711305
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||| ||||||    
T  32711486 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaattt 32711387  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagat 194  Q
    ||||||||||||||||||||  ||||||| ||||             |||| |||||||||||||||||||||||||||||||||||| |||||    
T  32711386 cgaaggattgtttaataaatcagattttg-tgga-----------aatctattgaaattttagcatgaaaaagtctttcatgaaaacaagagat 32711305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 37857144 - 37857260
Alignment:
Q  24 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 123  Q
    ||||||| |||||||||||||| |||| ||||||||| ||       ||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  37857144 aaaaagttttgaggtattcaattaagatttttcatcacttaaaaaaagtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattgg 37857243  T
Q  124 attttgatggattttgt 140  Q
    |||||||||||||||||    
T  37857244 attttgatggattttgt 37857260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 8410526 - 8410416
Alignment:
Q  77 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggga--ttttctactgaaattttagcatgaaaaagt 174  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||||||||  |||| || ||||||||||| |||| |||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggattttttttagtgaaattttagtatgacaaagt 8410427  T
Q  175 ctttcatgaaa 185  Q
    |||||| ||||    
T  8410426 ctttcacgaaa 8410416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 71 - 186
Target Start/End: Complemental strand, 13478384 - 13478269
Alignment:
Q  71 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaa 170  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||   |||||||||||||| |    
T  13478384 gtcttgtagtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggattttttagctaaattttagcatgata 13478285  T
Q  171 aagtctttcatgaaaa 186  Q
    |||||||| |||||||    
T  13478284 aagtcttttatgaaaa 13478269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 9770503 - 9770439
Alignment:
Q  142 ggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 206  Q
    |||||||||| |||||||||| ||| ||||| | |||||| ||||||||||||||||||||||||    
T  9770503 ggattttctaatgaaattttaacataaaaaaatatttcatcaaaacatgagatttcttaggattg 9770439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 18958973 - 18958911
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt 63  Q
    |||||||||| ||||  |||| |||||||||||| ||||||||||||||||| || |||||||    
T  18958973 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttatcattt 18958911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 9770545 - 9770497
Alignment:
Q  80 tattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 128  Q
    |||||||||| ||||||||||| ||| ||| ||||||||||||||||||    
T  9770545 tattcaaaataattcaaatttcaaagaattatttaataaattggatttt 9770497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 41070018 - 41070074
Alignment:
Q  72 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 128  Q
    |||||||||||| |||||||||| |||||| || |||||||| |||||||| |||||    
T  41070018 tcttgtggtatttaaaatcattccaatttcaaatgattgtttgataaattgaatttt 41070074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 14782381 - 14782330
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  14782381 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 14782330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 19718127 - 19718076
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  19718127 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 19718076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 44726056 - 44726005
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  44726056 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 44726005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 4302846 - 4302813
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagact 52  Q
    ||||||||||||||| ||||||||||||||||||    
T  4302846 ttttaaaaaagtctttaggtattcaatcaagact 4302813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 4031503 - 4031455
Alignment:
Q  2 atcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 50  Q
    ||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  4031503 atcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 4031455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 32497465 - 32497497
Alignment:
Q  23 aaaaaagtcttgaggtattcaatcaagactttt 55  Q
    |||||||||||| ||||||||||||||||||||    
T  32497465 aaaaaagtcttgtggtattcaatcaagactttt 32497497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 37567401 - 37567365
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  37567401 ttttaaaaaagtctttaggtattcaattaagactttt 37567365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 150; Significance: 2e-79; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 36674335 - 36674137
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  36674335 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 36674236  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  36674235 tgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 36674137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 19253828 - 19254057
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  19253828 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 19253927  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19253928 cgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 19254027  T
Q  201 ggattgnnnnnnncttttaaaattttacta 230  Q
    ||||||       |||||||||||||||||    
T  19254028 ggattgtttttttcttttaaaattttacta 19254057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 34484235 - 34484037
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||||||||||||||||||||||    
T  34484235 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaattt 34484136  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||| ||||||||||||| ||||||||||||    
T  34484135 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 34484037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 20498210 - 20498415
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  20498210 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 20498309  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20498310 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 20498409  T
Q  201 ggattg 206  Q
    ||||||    
T  20498410 ggattg 20498415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 3 - 199
Target Start/End: Original strand, 40897147 - 40897343
Alignment:
Q  3 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||| ||||||||||||||||||||||||||    
T  40897147 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcg 40897246  T
Q  103 aaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  40897247 aaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 40897343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 11431531 - 11431725
Alignment:
Q  5 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||    
T  11431531 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaa 11431630  T
Q  105 ggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||||||||||||||||||||||| |||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  11431631 ggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 11431725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 44906718 - 44906520
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  44906718 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 44906619  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| || || ||||||| || ||||| |||||||||||||| ||||||||||||    
T  44906618 cgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaagatgagatttctt 44906520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 996291 - 996086
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||||| |||||| |||||||||||| ||||||||||||||| | || |||| ||       |||| |||||||||||||||||||||||||    
T  996291 aatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 996192  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  996191 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 996092  T
Q  201 ggattg 206  Q
    ||||||    
T  996091 ggattg 996086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 6035258 - 6035053
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||       |||| ||| |||||||||||||||||||||    
T  6035258 aatcaagagtctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaattt 6035159  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||| | ||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||    
T  6035158 cgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgagatttctta 6035059  T
Q  201 ggattg 206  Q
     |||||    
T  6035058 agattg 6035053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 10139351 - 10139146
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| || || |||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  10139351 aatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 10139252  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10139251 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 10139152  T
Q  201 ggattg 206  Q
    ||||||    
T  10139151 ggattg 10139146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 2 - 199
Target Start/End: Original strand, 32580179 - 32580375
Alignment:
Q  2 atcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttc 101  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||    
T  32580179 atcaaggctctttgtcattttaaaaaagtcttgaggtattcaat-aagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttc 32580277  T
Q  102 gaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  32580278 gaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 32580375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 17946289 - 17946487
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||| ||| |||||||||||||||||||||    
T  17946289 aatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaattt 17946388  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    | |||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  17946389 caaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 17946487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 26107262 - 26107460
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  26107262 aatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaaaatcattcaaattt 26107361  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| || || ||||||| || |||||||| |||||| |||| ||||||||||||    
T  26107362 cgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaagatgagatttctt 26107460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 5 - 206
Target Start/End: Complemental strand, 33808000 - 33807798
Alignment:
Q  5 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttcga 103  Q
    |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||        |||| ||||||||||||||||||||||||||||    
T  33808000 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcga 33807901  T
Q  104 aggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagga 203  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33807900 aggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagga 33807801  T
Q  204 ttg 206  Q
    |||    
T  33807800 ttg 33807798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 3999850 - 3999645
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||        ||| |||||||||||||||||||||||||    
T  3999850 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaattt 3999751  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  3999750 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacatgagatttctta 3999651  T
Q  201 ggattg 206  Q
    ||||||    
T  3999650 ggattg 3999645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 6589577 - 6589770
Alignment:
Q  13 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 112  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||| ||| ||    
T  6589577 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagaattatt 6589676  T
Q  113 taataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 206  Q
    ||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6589677 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 6589770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 48379158 - 48379356
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  48379158 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 48379257  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| || || |||||||  | ||||| |||||||||||||| || |||||||||    
T  48379258 cgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagatcagatttctt 48379356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 52810379 - 52810577
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  52810379 aatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 52810478  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
     ||| ||||||||||||||||| ||||||||||||||||||||||||| ||  | ||||||| || |||||| ||||||||||||| ||||||||||||    
T  52810479 tgaatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 52810577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 31646489 - 31646293
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  31646489 aatcaagactctttgttattttaaaaaagtcttgacgtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaattt 31646390  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||  ||||||||||||    
T  31646389 cgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa--atgagatttctt 31646293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 52618170 - 52617978
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  52618170 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 52618071  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||      || ||||||||||| |||| ||||||||||||    
T  52618070 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttt------aacaagtctttcataaaaagatgagatttctt 52617978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 37820682 - 37820477
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||| ||||| ||||||||||||||| | || |||| ||       |||| |||||||||||||||||||||||||    
T  37820682 aatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 37820583  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37820582 cgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttctta 37820483  T
Q  201 ggattg 206  Q
     |||||    
T  37820482 agattg 37820477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 40246845 - 40247050
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||| ||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  40246845 aatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaaatcattcaaattt 40246944  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
     |||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  40246945 ggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattcctta 40247044  T
Q  201 ggattg 206  Q
     |||||    
T  40247045 tgattg 40247050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 20 - 199
Target Start/End: Original strand, 18749632 - 18749811
Alignment:
Q  20 tttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 119  Q
    |||||||||||||||||||||||||| || ||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18749632 tttaaaaaagtcttgaggtattcaataaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 18749731  T
Q  120 ttggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  18749732 ttggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 18749811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 54628844 - 54629043
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnng-tcttgtggtattcaaaatcattcaaatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||    
T  54628844 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacaaaaaaaaaaatcttgtggtattcaaaatcattcaaatt 54628943  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || ||||||||||||||| |||| ||||||||||||    
T  54628944 tcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttctt 54629043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 24 - 206
Target Start/End: Complemental strand, 3206387 - 3206205
Alignment:
Q  24 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 123  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |    
T  3206387 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 3206288  T
Q  124 attttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 206  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  3206287 attttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttatgattg 3206205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 51737932 - 51737746
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 99  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||    
T  51737932 aatcaagactctttatcattttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 51737833  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaa 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |  || ||||||| || ||||||||||||||| ||||    
T  51737832 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataaaaa 51737746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 25418367 - 25418572
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||| ||        ||| | |||||||||||||||||||||||    
T  25418367 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaatcattcaaattt 25418466  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
      ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||| ||||    
T  25418467 gaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaacatgagattcctta 25418566  T
Q  201 ggattg 206  Q
    ||||||    
T  25418567 ggattg 25418572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 29449063 - 29448858
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| || |||||||||  ||||||||||| | ||||||||||||||| |  |||| ||       |||| |||||||||||||||||||||||||    
T  29449063 aatcaagattccttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 29448964  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||    
T  29448963 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaacatgagatttctta 29448864  T
Q  201 ggattg 206  Q
    ||||||    
T  29448863 ggattg 29448858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 35337736 - 35337939
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| || |||||||||||||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||  ||||||||||    
T  35337736 aatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaaaattcaaattt 35337835  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||    
T  35337836 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcatgaaaacatgagattt-tta 35337933  T
Q  201 ggattg 206  Q
    ||||||    
T  35337934 ggattg 35337939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 53929333 - 53929104
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||| |||| |    
T  53929333 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatat 53929234  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    |||| |||||||||||||||  |||||||||||||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||    
T  53929233 cgaacgattgtttaataaataagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagatttttta 53929134  T
Q  201 ggattgnnnnnnncttttaaaattttacta 230  Q
    ||||||       |||||||||||||||||    
T  53929133 ggattgtttttttcttttaaaattttacta 53929104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 33996746 - 33996547
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||        ||  |||||||||||||||||||||||||    
T  33996746 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattcaaattt 33996647  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||    
T  33996646 cgaaggattgtttaataaatcagattttgatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagatttctta 33996547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 50903448 - 50903247
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn---gtcttgtggtattcaaaatcattcaaa 97  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||          |||||||||||||||||||||||||||    
T  50903448 aatcaagactctttgtcattttaaaaaagtcttaaggtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtggtattcaaaatcattcaaa 50903349  T
Q  98 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 197  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||| ||||| ||||||| ||||||||||    
T  50903348 ttaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaatatgagatttc 50903249  T
Q  198 tt 199  Q
    ||    
T  50903248 tt 50903247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 20832993 - 20833187
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||       |||||||||||||||||||||||||||||     
T  20832993 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattc 20833092  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 195  Q
     |||||||||||||||||||||||||||||||||||||||| |||||  || || ||||||| || |||||||| ||||||||||| || |||||    
T  20833093 ggaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 54625605 - 54625798
Alignment:
Q  13 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 112  Q
    ||||||||| |||||| |||||  |||||||||||||||| || |||| ||       |||| |||||||||||||| ||||||||||||||||||||||    
T  54625605 ttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtt 54625704  T
Q  113 taataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 206  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  54625705 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacatgagatttcttaagattg 54625798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 10660536 - 10660675
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||||||||||||||||||||||    
T  10660536 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtggtattcaaaatcattcaaattt 10660635  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgt 140  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10660636 cgaaggattgtttaataaattggattttgatggattttgt 10660675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 44762242 - 44762037
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| ||||||||| ||  |||||||||||||||| || |||| ||       |||| |||||||| ||||| |||||| |||    
T  44762242 aatcaagattctttgtcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagttt 44762143  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||    
T  44762142 cgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttctta 44762043  T
Q  201 ggattg 206  Q
     |||||    
T  44762042 agattg 44762037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 10728846 - 10728658
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||| ||||||||||||||||    
T  10728846 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaatcattcaaattt 10728747  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
     ||||||||||||||||||||||||||||||||||||||          || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  10728746 ggaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 10728658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 39038041 - 39038229
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||||| |||||||||||||||||    
T  39038041 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaatcattcaaattt 39038140  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||| |||||||||||||||||||||||||||||||||| |          || ||||||| || ||||||||||||||| |||| ||||||||||||    
T  39038141 cgaagaattgtttaataaattggattttgatggattttgtag----------tgtaattttaacaagaaaaagtctttcataaaaagatgagatttctt 39038229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 4 - 205
Target Start/End: Original strand, 52114532 - 52114734
Alignment:
Q  4 caagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttcg 102  Q
    ||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||| ||        |||| |||||||||||||| ||||||||||||    
T  52114532 caagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaataattcaaatttcg 52114631  T
Q  103 aaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 202  Q
     |||||||||||||||||  ||||||||| |||||||||| |||||||| | |||||||||||||||||| |||||  ||||||||||||||||||||||    
T  52114632 caggattgtttaataaatcagattttgatagattttgtggaattttctagtaaaattttagcatgaaaaaatcttttgtgaaaacatgagatttcttagg 52114731  T
Q  203 att 205  Q
    |||    
T  52114732 att 52114734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 23753591 - 23753463
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  23753591 aatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 23753492  T
Q  101 cgaaggattgtttaataaattggattttg 129  Q
    |||||||||||||||||||||||||||||    
T  23753491 cgaaggattgtttaataaattggattttg 23753463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 5825139 - 5825268
Alignment:
Q  77 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtct 176  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||| ||||||||||||| ||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggct 5825238  T
Q  177 ttcatgaaaacatgagatttcttaggattg 206  Q
    |||||||||||||||||||||||| |||||    
T  5825239 ttcatgaaaacatgagatttcttatgattg 5825268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 51699684 - 51699495
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||| ||||| ||||||||||||||||| || |||| ||        ||| |||||||||||||||||||||||||    
T  51699684 aatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtattcaaaatcattcaaattt 51699586  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatga 191  Q
    |||||||||| |||||||||  |||||||||| |||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||    
T  51699585 cgaaggattggttaataaataagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaaatctttcgtgaaaacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 198
Target Start/End: Original strand, 29030011 - 29030203
Alignment:
Q  5 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 104  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||||||||||||||||||||||||||||| |||    
T  29030011 aagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaa-gtcttgtggtattcaaaatcattcaaattttgaa 29030109  T
Q  105 ggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 198  Q
    ||||||||||||||||  |||||||||||||||||||| |||||||| |||||||||| ||||||    | ||| |||||||||||||||||||    
T  29030110 ggattgtttaataaatcagattttgatggattttgtggaattttctaatgaaattttaacatgaattttttttttatgaaaacatgagatttct 29030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 37454862 - 37455050
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  37454862 aatcaagattctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 37454961  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||| |||||||||||||||          || ||||||||||||||| || || ||||||| || |||||||| ||||||||||| ||||||||||||    
T  37454962 cgaatgattgtttaataaat----------tgaattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttctt 37455050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 50762255 - 50762067
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||       |||||||||||||||||||||||| |||||    
T  50762255 aatcaagactctttgtcattttaaaaaagtcttgagatattcaatcatgacttttcataatttaaaaaaagtcttgtggtattcaaaatcattctaattt 50762156  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||| |||||||| |||||||||||||||||||||||||          || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  50762155 cgaatgattgtttgataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 50762067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 6975750 - 6975924
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  6975750 aatcaagactctttgttattttaaaa-agtcttgaggtattcaatcaagacttttcatcattt--aaaaagtcttgtggtattcaaaatcattcaaattt 6975846  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaaca 188  Q
    ||||| ||| |||| |||||          |||| |||||||||||||||| | |||||| ||||||||| |||||||||||||||||    
T  6975847 cgaagaattatttactaaat----------tggaatttgtgggattttctagtaaaatttgagcatgaaacagtctttcatgaaaaca 6975924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 24 - 134
Target Start/End: Complemental strand, 539586 - 539476
Alignment:
Q  24 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 123  Q
    ||||||||||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  539586 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 539487  T
Q  124 attttgatgga 134  Q
    |||||||||||    
T  539486 attttgatgga 539476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 8 - 205
Target Start/End: Original strand, 44276397 - 44276580
Alignment:
Q  8 actctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaagga 107  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||       ||||  |||||||||||||||||||||||    ||||    
T  44276397 actctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaatt----agga 44276492  T
Q  108 ttgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatt 205  Q
    |||||||||||||          ||||||||||||||||||||| |||||||||| || |||||| ||||||||||| ||||||||||| || |||||    
T  44276493 ttgtttaataaat----------tggattttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgagattttttgggatt 44276580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 174
Target Start/End: Original strand, 55235198 - 55235359
Alignment:
Q  13 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 112  Q
    |||||||||||||||||||  ||||||||||||||| ||| ||||||| ||       ||||  || ||||||||||||||||||||||||| |||||||    
T  55235198 ttgtcattttaaaaaagtcacgaggtattcaatcaaaactcttcatcaattaaaaaa-gtctcatgatattcaaaatcattcaaatttcgaaagattgtt 55235296  T
Q  113 taataaattggattttgatgga-ttttgtgggattttctactgaaattttagcatgaaaaagt 174  Q
    ||||||||||| |||||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  55235297 taataaattggtttttgatggatttttgtgggattttctaatgaaattttagcataaaaaagt 55235359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 123 - 206
Target Start/End: Complemental strand, 6131316 - 6131233
Alignment:
Q  123 gattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 206  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6131316 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 6131233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 95 - 206
Target Start/End: Complemental strand, 1440005 - 1439894
Alignment:
Q  95 aaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagat 194  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| | ||||||| | |||||||||||||||| |||||||||||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagat 1439906  T
Q  195 ttcttaggattg 206  Q
    || |||||||||    
T  1439905 tttttaggattg 1439894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 23 - 206
Target Start/End: Original strand, 27899367 - 27899540
Alignment:
Q  23 aaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattg 122  Q
    ||||||||| |  ||||||||||||||||| ||  ||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||      
T  27899367 aaaaaagtcatatggtattcaatcaagactctttgtcatttaaaaaaagtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaatca 27899466  T
Q  123 gattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 206  Q
    |||||||          | |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  27899467 gattttg----------taggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttatgattg 27899540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 1440158 - 1440007
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 99  Q
    |||||||| |||||||||||| |||||| || ||| ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||    
T  1440158 aatcaagattctttgtcatttaaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 1440059  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttcta 151  Q
    || ||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  1440058 tccaaggattgtttaataaatcagattttgatggattttatgggattttcta 1440007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 22057762 - 22057933
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagt-cttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 99  Q
    |||||||| |||||||||||| ||||||   |||| ||||||| ||||||||| || |||| ||        ||| |||||||| |||||||||||||||    
T  22057762 aatcaagattctttgtcatttaaaaaaaaaacttgtggtattccatcaagactcttgatcacttaaaaaaaatctagtggtatttaaaatcattcaaatt 22057861  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaa 171  Q
    |||| ||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  22057862 tcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 71 - 206
Target Start/End: Complemental strand, 39842619 - 39842494
Alignment:
Q  71 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaa 170  Q
    |||| ||| |||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||          || || ||||||| || ||||    
T  39842619 gtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttg----------taatgtaattttaacaagaaa 39842530  T
Q  171 aagtctttcatgaaaacatgagatttcttaggattg 206  Q
    |||||||||||||||| |||||||||||| ||||||    
T  39842529 aagtctttcatgaaaagatgagatttcttgggattg 39842494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 76 - 206
Target Start/End: Original strand, 52080003 - 52080117
Alignment:
Q  76 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtc 175  Q
    ||||||||||||||||||||||||| |||||||||||||||||||            ||||||||||||||||||| ||||||||||||||||||||||     
T  52080003 gtggtattcaaaatcattcaaattttgaaggattgtttaataaat----------cagattttgtgggattttctaatgaaattttagcatgaaaaagt- 52080091  T
Q  176 tttcatgaaaacatgagatttcttaggattg 206  Q
         ||||||||||||||||||||||||||    
T  52080092 -----tgaaaacatgagatttcttaggattg 52080117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 18749571 - 18749630
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18749571 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatca 18749630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 12103634 - 12103729
Alignment:
Q  5 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||       ||||  ||||||||||||||||||||||||    
T  12103634 aagattctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaattt 12103729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 33807734 - 33807680
Alignment:
Q  152 ctgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33807734 ctgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 33807680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 15493061 - 15492967
Alignment:
Q  5 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||       ||||  ||||||||||||||||||||||||    
T  15493061 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcactt-aaaaatgtctcatggtattcaaaatcattcaaattt 15492967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 23535946 - 23535890
Alignment:
Q  71 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattt 127  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||    
T  23535946 gtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27240448 - 27240408
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtatt 41  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  27240448 aatcaagactctttgtcattttaaaaaagttttgaggtatt 27240408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6131376 - 6131325
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    ||||||||||| ||||||||| |||||||| ||| |||||||||||||||||    
T  6131376 aatcaagactcattgtcatttaaaaaaagttttgtggtattcaatcaagact 6131325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 45862983 - 45863040
Alignment:
Q  142 ggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 45863040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 27593198 - 27593234
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||||||||| |||||||||||||||||||||    
T  27593198 ttttaaaaaagtctttaggtattcaatcaagactttt 27593234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 36786017 - 36786053
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36786017 ttttaaaaaagtctttaggtattcaatcaagactttt 36786053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 6975712 - 6975759
Alignment:
Q  5 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||||| | || |||||||||||| |||||||||||||||||    
T  6975712 aagactctttgtaacttaaaaaaagtcttgtggtattcaatcaagact 6975759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10660494 - 10660545
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  10660494 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 10660545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27899387 - 27899430
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 44  Q
    ||||||||||||||||||||| |||||||||| | |||||||||    
T  27899387 aatcaagactctttgtcatttaaaaaaagtctggtggtattcaa 27899430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 36674377 - 36674326
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  36674377 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 36674326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3206443 - 3206394
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 50  Q
    ||||||||||||||   |||| |||||||||||| |||||||||||||||    
T  3206443 aatcaagactcttttcaatttaaaaaaagtcttgtggtattcaatcaaga 3206394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 10216196 - 10216163
Alignment:
Q  22 taaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||||||| ||||||||||||||||||||    
T  10216196 taaaaaagtcttgtggtattcaatcaagactttt 10216163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 10225704 - 10225671
Alignment:
Q  22 taaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||||||| ||||||||||||||||||||    
T  10225704 taaaaaagtcttgtggtattcaatcaagactttt 10225671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23753633 - 23753584
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 50  Q
    |||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  23753633 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 23753584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 198
Target Start/End: Original strand, 12103733 - 12103789
Alignment:
Q  143 gattttctactgaaattttagcatgaaaaagtctttcatgaaaaca-tgagatttct 198  Q
    ||||||||| |||||||||| || ||| |||||||||||||| ||| ||||||||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatgaagacattgagatttct 12103789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 39338335 - 39338299
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  39338335 ttttaaaaaagtctttaggtattcaataaagactttt 39338299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 44276352 - 44276392
Alignment:
Q  5 aagactctttgtcattttaaaaaagtcttgaggtattcaat 45  Q
    |||||||||||| |||| |||||||||||| ||||||||||    
T  44276352 aagactctttgtaatttaaaaaaagtcttgtggtattcaat 44276392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 51737952 - 51737912
Alignment:
Q  23 aaaaaagtcttgaggtattcaatcaagacttttcatcattt 63  Q
    |||||||||||| ||||||||||||||||| || |||||||    
T  51737952 aaaaaagtcttgtggtattcaatcaagactctttatcattt 51737912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 146; Significance: 6e-77; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 14000309 - 14000111
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  14000309 aatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 14000210  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  14000209 tgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 14000111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 21147069 - 21147274
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  21147069 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 21147168  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21147169 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 21147268  T
Q  201 ggattg 206  Q
    ||||||    
T  21147269 ggattg 21147274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 1152307 - 1152102
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||       ||||||||||||||||||||||||||||||    
T  1152307 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 1152208  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||| ||||||| |||||||||||||    
T  1152207 cgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttctta 1152108  T
Q  201 ggattg 206  Q
     |||||    
T  1152107 agattg 1152102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 7947777 - 7947579
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||| | |||||||||||||||||||||    
T  7947777 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaattt 7947678  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| || || ||||||| || |||||||||||||||||||| | ||||||||||    
T  7947677 cgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttctt 7947579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 13925933 - 13926131
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       ||||||||||||||||||||||||||||||    
T  13925933 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 13926032  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||| ||||| |||| |||||||    
T  13926033 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgatatttctt 13926131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 4550461 - 4550266
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  4550461 aatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 4550362  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 196  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| || || ||||||| || |||| ||||||||||||||| |||||||||    
T  4550361 cgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaagatgagattt 4550266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 5273123 - 5272924
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||  ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||    
T  5273123 aatcaagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaattt 5273024  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    |||| |||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5273023 cgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttctta 5272924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 12 - 206
Target Start/End: Complemental strand, 33656234 - 33656040
Alignment:
Q  12 tttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgt 111  Q
    |||||||||| |||||||||||| ||||||||||||||||| || |||| ||        |||  |||||||||||||||||||||||||||||||||||    
T  33656234 tttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgt 33656135  T
Q  112 ttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 206  Q
    |||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33656134 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggattg 33656040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 7016943 - 7016738
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||||||   |||| ||||||||||||  |||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  7016943 aatcaagactcttttcaatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 7016844  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7016843 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttctta 7016744  T
Q  201 ggattg 206  Q
    | ||||    
T  7016743 gaattg 7016738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 39852372 - 39852545
Alignment:
Q  26 aaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggat 125  Q
    |||||||||||||||||||||||||||| |||||||||       |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39852372 aaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggat 39852471  T
Q  126 tttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||||||||||| ||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  39852472 tttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 39852545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 5 - 206
Target Start/End: Complemental strand, 27459149 - 27458949
Alignment:
Q  5 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 104  Q
    |||| |||||||||||| ||||||||||||  |||||||||||||||| || |||| ||       |||| |||||||||||||||||||| |||| |||    
T  27459149 aagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaa-gtctagtggtattcaaaatcattcagattttgaa 27459051  T
Q  105 ggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 204  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||| ||||||||||||    
T  27459050 ggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaaaacatgatatttcttaggat 27458951  T
Q  205 tg 206  Q
    ||    
T  27458950 tg 27458949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 139275 - 139474
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| ||||||||| || |||||||||||||||||||| |||| ||       |||| |||||||||||||||||||||||||    
T  139275 aatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 139374  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    |||||||||||||||||||   |||||||||||||||||| |||||||| | ||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  139375 cgaaggattgtttaataaaccagattttgatggattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaacatgagatttctta 139474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 4240656 - 4240517
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  4240656 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 4240557  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgt 140  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4240556 cgaaggattgtttaataaattggattttgatggattttgt 4240517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 1461342 - 1461154
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||       |||||| | |||||||||||||||||||||    
T  1461342 aatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattcaaaatcattcaaattt 1461243  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||          ||||| ||||||| || |||||| ||||||||||||| ||||||||||||    
T  1461242 cgaaggattgtttaataaattggattttgatggattttg----------tactgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 1461154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 40013906 - 40013718
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||| |||||||||||||||||||||    
T  40013906 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttattcaaaatcattcaaattt 40013807  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||| ||||||||||| ||||||||||          || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  40013806 cgaaggattgtttaatcaattggattttaatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 40013718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 32158102 - 32157899
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatt 99  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||   | |||| ||        |||| ||||||||||||||||||||||||    
T  32158102 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatt 32158003  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaa---agtctttcatgaaaacatgagattt 196  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||| | ||||||||||| |||||   |||||||||||||||||||||||||    
T  32158002 tcgaaggattgtttaataaattagattttgacggattttgtgggattttctagtaaaattttagcacgaaaaaatagtctttcatgaaaacatgagattt 32157903  T
Q  197 ctta 200  Q
    ||||    
T  32157902 ctta 32157899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 22746299 - 22746496
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||       |||||||| |||||||||||||||||||||    
T  22746299 aatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaattt 22746398  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    |||| ||||||||||||||||| |||||||||||||||||||||        || ||||||| || |||||| ||||||||||||| || ||||||||||    
T  22746399 cgaatgattgtttaataaattgaattttgatggattttgtggga--------tgtaattttaacaagaaaaactctttcatgaaaagataagatttctta 22746490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 5949111 - 5949298
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||        |||||||||||||||||||||||||||||    
T  5949111 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaa-tcttgtggtattcaaaatcattcaaattt 5949209  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||          || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  5949210 cgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 5949298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 849172 - 849334
Alignment:
Q  24 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 123  Q
    ||||||||||| ||||||||||||||||| || |||| ||       ||||  ||||||||||||||||||||||||||||||||||||||||||||  |    
T  849172 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 849271  T
Q  124 attttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaa 186  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  849272 attttgatagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 37013916 - 37014044
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||       |||||| |||||||||||||||||||||||    
T  37013916 aatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattcaaaatcattcaaattt 37014015  T
Q  101 cgaaggattgtttaataaattggattttg 129  Q
    |||||| ||||||||||||||||||||||    
T  37014016 cgaagggttgtttaataaattggattttg 37014044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 6460794 - 6460965
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| ||||||||| ||  |||||||||||||||| || |||||||        ||| |||||||||||||||||||||||||    
T  6460794 aatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaatcattcaaattt 6460893  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaa 172  Q
    |||||| |||||||||||||  ||||||||||||||||| ||||||||||| |||||||||| |||||||||    
T  6460894 cgaaggtttgtttaataaatcagattttgatggattttgagggattttctagtgaaattttatcatgaaaaa 6460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 14465431 - 14465266
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||||||||||||| |||||||| ||  ||||||||||||||||| ||||||  ||       ||||||||||||||||||||||||||||||    
T  14465431 aatcaagactctttgtcatttaaaaaaagttttctggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaattt 14465332  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcat 166  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| |||||||| | | ||||||||||    
T  14465331 cgaaagattgtttaataaatcggattttgatgaattttgtggaattttctagtaatattttagcat 14465266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 206
Target Start/End: Original strand, 9689695 - 9689864
Alignment:
Q  36 ggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 135  Q
    ||||||||||||||||| ||||||| ||       ||||||||||||| ||||||||| |||||||||| |||||||| ||||||| |||||||||||||    
T  9689695 ggtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagattttgatggat 9689793  T
Q  136 tttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 206  Q
    | |||| ||||||||  | ||||||||  ||||||||||||||||| ||||||| |||||||||| |||||    
T  9689794 tgtgtgagattttcttgtaaaattttattatgaaaaagtctttcataaaaacataagatttcttatgattg 9689864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 9220911 - 9220716
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||| ||||||||||||||  ||||||||||| | ||||||||||||||| || |||| ||       ||||| || |||||||||||||||||||||    
T  9220911 aatcaaaactctttgtcatttagaaaaagtcttgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattcaaattt 9220812  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    | |||||||||||||| |||          | || ||||| ||||||| || | |||||||| || ||||||||||||| ||||||||||| ||||||||    
T  9220811 ctaaggattgtttaatgaat----------tagaatttgtaggattttatagtaaaattttaacacgaaaaagtctttcgtgaaaacatgatatttctta 9220722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 40013948 - 40013897
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  40013948 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 40013897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5273165 - 5273116
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 50  Q
    |||||||| | |||||||||| |||||||||||| | |||||||||||||    
T  5273165 aatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaaga 5273116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 26806611 - 26806578
Alignment:
Q  22 taaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||||||| ||||||||||||||||||||    
T  26806611 taaaaaagtcttgtggtattcaatcaagactttt 26806578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 17518474 - 17518510
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  17518474 ttttaaaaaagtcttgtggtattcaatcaagattttt 17518510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 24776358 - 24776563
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  24776358 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 24776457  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24776458 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 24776557  T
Q  201 ggattg 206  Q
    ||||||    
T  24776558 ggattg 24776563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 16269694 - 16269899
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  16269694 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 16269793  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16269794 cgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 16269893  T
Q  201 ggattg 206  Q
    ||||||    
T  16269894 ggattg 16269899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 20605239 - 20605444
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||| ||||||    
T  20605239 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaattt 20605338  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20605339 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 20605438  T
Q  201 ggattg 206  Q
    ||||||    
T  20605439 ggattg 20605444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 31170831 - 31170626
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  31170831 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 31170732  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    | ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31170731 ccaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 31170632  T
Q  201 ggattg 206  Q
    ||||||    
T  31170631 ggattg 31170626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 18177270 - 18177468
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||||||||||||||||||||||    
T  18177270 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaattt 18177369  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||| || |||| ||||||||||||    
T  18177370 cgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgagatttctt 18177468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 33135626 - 33135823
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||| |||||||||||||||||||||||||    
T  33135626 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaattt 33135725  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || ||||||||||||||| |||| ||||||||||||    
T  33135726 cgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aaaaaatgagatttctt 33135823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 28844558 - 28844756
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  28844558 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 28844657  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||| || || |||||||  | ||||||||||||||| |||| ||||||||||||    
T  28844658 cgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaagatgagatttctt 28844756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 14198784 - 14198579
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||| | |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||  |||||||||||||||||||||||||    
T  14198784 aatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaatcattcaaattt 14198685  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  14198684 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttctta 14198585  T
Q  201 ggattg 206  Q
    ||||||    
T  14198584 ggattg 14198579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 25288162 - 25288360
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||        |||||||||||||||||||||||||||||    
T  25288162 aatcaagactctttgtcattttaaaaaagtcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaattt 25288261  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| || || ||||||| || || || |||||||||||||| ||||||||||||    
T  25288262 cgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatgagatttctt 25288360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 5093254 - 5093049
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||  || |||| ||       |||| || ||||||||||||||||||||||    
T  5093254 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctagtagtattcaaaatcattcaaattt 5093155  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
     |||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5093154 tgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcataaaaacatgagatttctta 5093055  T
Q  201 ggattg 206  Q
    ||||||    
T  5093054 ggattg 5093049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 12407383 - 12407588
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||| ||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  12407383 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 12407482  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
     |||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  12407483 tgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaacatgagatttctta 12407582  T
Q  201 ggattg 206  Q
     |||||    
T  12407583 agattg 12407588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 22551970 - 22551765
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||| ||       |||| |||||||||||||| ||||||||||    
T  22551970 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaattattcaaattt 22551871  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    |||| ||||||||| ||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  22551870 cgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacatgagatttctta 22551771  T
Q  201 ggattg 206  Q
     |||||    
T  22551770 tgattg 22551765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 43847649 - 43847854
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| || ||||||||||||||||||||||    
T  43847649 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaatcattcaaattt 43847748  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  || ||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  43847749 cgaaggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacatgagatttctta 43847848  T
Q  201 ggattg 206  Q
    ||||||    
T  43847849 ggattg 43847854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 10657409 - 10657607
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  10657409 aatcaagatcctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 10657508  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||| ||||||||||| |||| |||||||    
T  10657509 cgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaaatttctt 10657607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 26788787 - 26788969
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn--gtcttgtggtattcaaaatcattcaaat 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||    
T  26788787 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattcaaaaaaaaagtcttgtggtattcaaaatcattcaaat 26788886  T
Q  99 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcat 181  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||    
T  26788887 tttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 26788969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 35317065 - 35317264
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| ||||||||||||   ||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  35317065 aatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 35317164  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35317165 cgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctta 35317264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 305672 - 305467
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| | |||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  305672 aatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 305573  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
     ||| |||||||||||||||  ||||| ||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  305572 tgaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacatgagatttctta 305473  T
Q  201 ggattg 206  Q
    ||||||    
T  305472 ggattg 305467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 7026607 - 7026746
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  7026607 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 7026706  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgt 140  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7026707 cgaaggattgtttaataaattggattttgatggattttgt 7026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 28740490 - 28740302
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  28740490 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 28740391  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||          || ||||||| || ||||||||||||||| |||| ||||||||||||    
T  28740390 cgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcataaaaagatgagatttctt 28740302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 32125253 - 32125455
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcat---catttnnnnnnngtcttgtggtattcaaaatcattcaaa 97  Q
    |||||| | |||||||||||| ||||||||| || ||||||||||||||||| || ||   |||||       |||  ||||||||||||||||||||||    
T  32125253 aatcaaaattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtggtattcaaaatcattcaaa 32125352  T
Q  98 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 197  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||    
T  32125353 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaatatgagatttc 32125452  T
Q  198 tta 200  Q
    |||    
T  32125453 tta 32125455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 1789445 - 1789630
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||  | ||||||||||| ||| || |||| ||       |||| |||||||||||||||||||||||||    
T  1789445 aatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 1789544  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaa 186  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  1789545 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatcaaaa 1789630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 44765778 - 44765998
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||| ||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  44765778 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 44765877  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    |||| |||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||         |||||||||||||||||||||||||    
T  44765878 cgaaagattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcat---------tttcatgaaaacatgagatttctta 44765968  T
Q  201 ggattgnnnnnnncttttaaaattttacta 230  Q
    ||||||       |||||||||||||||||    
T  44765969 ggattgtttttttcttttaaaattttacta 44765998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 9120129 - 9120334
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||||||   ||||||||||||||||| | ||||||||||||| | || |||| ||        ||| ||| |||||||||||||||| ||||    
T  9120129 aatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatcattcagattt 9120228  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
      ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  9120229 taaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatgagatttctta 9120328  T
Q  201 ggattg 206  Q
    ||||||    
T  9120329 ggattg 9120334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 8 - 199
Target Start/End: Original strand, 3463682 - 3463863
Alignment:
Q  8 actctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaagga 107  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||       ||||||||||||| |||||||||||| |||| |||||    
T  3463682 actctttgtcattttaaaaaagtcttgaggtgttcaatcaagacttttcatcatttaaaaaaagtcttgtggtatttaaaatcattcaattttcaaagga 3463781  T
Q  108 ttgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||||||||||||||||||||||||||||||          || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  3463782 ttgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttctt 3463863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 3574850 - 3574978
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||| |||||||||||||||||||||    
T  3574850 aatcaagactaattgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaattt 3574949  T
Q  101 cgaaggattgtttaataaattggattttg 129  Q
    |||||||||||||||||||||||||||||    
T  3574950 cgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 6224755 - 6224626
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtattcaaaatcattcaaatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||       ||||||||||||||||||| |||||||||    
T  6224755 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactttaaaaaaagtcttgtggtattcaaaattattcaaatt 6224656  T
Q  100 tcgaaggattgtttaataaattggattttg 129  Q
    |||||||||| |||||||||||||||||||    
T  6224655 tcgaaggattatttaataaattggattttg 6224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 13833629 - 13833441
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||| ||| ||||||||||||||||||||  ||||||||||||||||||||||| ||       ||||| ||||||||||||||||||||||||    
T  13833629 aatcaagactttttatcattttaaaaaagtcttgatatattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaaaatcattcaaattt 13833530  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
     ||||||||||||||||||||||||          ||||||||||||| || || ||||||| || ||||||||||||||||| || ||||||||||||    
T  13833529 tgaaggattgtttaataaattggat----------tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaagatgagatttctt 13833441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 10125499 - 10125302
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtctt--gaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaat 98  Q
    |||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||||||||| ||       ||||  || |||||||||||||||||||    
T  10125499 aatcaagactctttgtcattttaaaaaagtcttttgagatattcaatcaaaacttttcatcacttaaaaaaagtctcatgatattcaaaatcattcaaat 10125400  T
Q  99 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 198  Q
    ||| |||||||||||||||||||| ||||||          ||||||||| || |||||||||| || ||||||||||||||| |||||| |||||||||    
T  10125399 ttcaaaggattgtttaataaattgaattttg----------tgggattttttagtgaaattttaacaagaaaaagtctttcataaaaacacgagatttct 10125310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 88 - 199
Target Start/End: Original strand, 43078653 - 43078764
Alignment:
Q  88 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaac 187  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| || || ||||||| |||||||||||||||||| ||||     
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  188 atgagatttctt 199  Q
    || |||||||||    
T  43078753 ataagatttctt 43078764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 215432 - 215320
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||       |||| |||||||||||||||||||||| ||    
T  215432 aatcaagactctttgtcaattttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaactt 215333  T
Q  101 cgaaggattgttt 113  Q
    | |||||||||||    
T  215332 caaaggattgttt 215320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 378940 - 379079
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||| ||||  | || |||||||||||| ||||||||||||| ||||||  ||||||       || |  ||||||||||||||||||||||||    
T  378940 aatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaaaactttttctcatttaaaaaaagtttcatggtattcaaaatcattcaaattt 379039  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgt 140  Q
     |||||||||||||||||||||||||||||| ||||||||    
T  379040 tgaaggattgtttaataaattggattttgatagattttgt 379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 26601407 - 26601270
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||||||||||||  ||||||||||||  |||||||||||||||| || |||| ||       |||  |||||||||||||||||||||||||    
T  26601407 aatcaagactctttgtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaaaatcattcaaattt 26601308  T
Q  101 cgaaggattgtttaataaattggattttgatggatttt 138  Q
    |||| | |||||||||||||  |||||||  |||||||    
T  26601307 cgaatgtttgtttaataaatcagattttgtgggatttt 26601270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 21370687 - 21370631
Alignment:
Q  71 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattt 127  Q
    |||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaattggattt 21370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 20605155 - 20605206
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||| |||||||||||| |||||||||||| |||||||||||||||||    
T  20605155 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagact 20605206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 13833671 - 13833609
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt 63  Q
    |||||||||| ||||  | || |||||||||||| |||||||||||||||||||| |||||||    
T  13833671 aatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactttttatcattt 13833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 11534881 - 11534917
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||||||||| |||||||||||||||||||||    
T  11534881 ttttaaaaaagtctttaggtattcaatcaagactttt 11534917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 34028971 - 34028935
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34028971 ttttaaaaaagtctttaggtattcaatcaagactttt 34028935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 199
Target Start/End: Complemental strand, 6224619 - 6224576
Alignment:
Q  156 aattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||||| || |||||||||||||||||||| ||||||||||||    
T  6224619 aattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6224576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 7026565 - 7026616
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  7026565 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 7026616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10125541 - 10125490
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||||||||  |||| |||||||| ||| |||||||||||||||||    
T  10125541 aatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaagact 10125490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 26788745 - 26788796
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  26788745 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 26788796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 19145036 - 19145082
Alignment:
Q  8 actctttgtcattttaaaaaagtcttgaggtattcaatcaagacttt 54  Q
    ||||||| |||||| ||||||| |||| |||||||||||||||||||    
T  19145036 actctttatcatttaaaaaaagacttgtggtattcaatcaagacttt 19145082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24776316 - 24776365
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 50  Q
    |||||||||||||| | |||| |||||||||||| | |||||||||||||    
T  24776316 aatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaaga 24776365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 7026545 - 7026577
Alignment:
Q  23 aaaaaagtcttgaggtattcaatcaagactttt 55  Q
    |||||||||||| ||||||||||||||||||||    
T  7026545 aaaaaagtcttgtggtattcaatcaagactttt 7026577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 20157795 - 20157759
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  20157795 ttttaaagaagtctttaggtattcaatcaagactttt 20157759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 24193595 - 24193631
Alignment:
Q  19 ttttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  24193595 ttttaaaaaagtcttggggtattcaatcaagattttt 24193631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 15238 - 15033
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| ||||||||||||  |||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  15238 aatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 15139  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15138 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttctta 15039  T
Q  201 ggattg 206  Q
    ||||||    
T  15038 ggattg 15033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 15881 - 15676
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| ||||||||||||  |||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  15881 aatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 15782  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15781 cgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttctta 15682  T
Q  201 ggattg 206  Q
    ||||||    
T  15681 ggattg 15676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 134; Significance: 9e-70; HSPs: 2)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 10562 - 10760
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||||    
T  10562 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaattt 10661  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    | |||||||||||||||||||| ||||||||||||||| ||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  10662 caaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 10760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10520 - 10571
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 52  Q
    |||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  10520 aatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagact 10571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 24 - 206
Target Start/End: Complemental strand, 38786 - 38605
Alignment:
Q  24 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 123  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||||||||||||||||| |  |    
T  38786 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa-tcag 38688  T
Q  124 attttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 206  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38687 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 38605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 39100 - 38895
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| ||||| |||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| ||| |||||||||||||||||||||    
T  39100 aatcaagattctttatcatttaaaaaaagtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaatcattcaaattt 39001  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
     |||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  39000 ggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattcctta 38901  T
Q  201 ggattg 206  Q
    ||||||    
T  38900 ggattg 38895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 102095 - 102302
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaag--tcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaat 98  Q
    |||||||| |||||||||||| |||||||  ||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||    
T  102095 aatcaagattctttgtcatttaaaaaaagagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 102194  T
Q  99 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 198  Q
    |||||| |||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||    
T  102195 ttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgagatttct 102294  T
Q  199 taggattg 206  Q
    || |||||    
T  102295 tatgattg 102302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 39822 - 39624
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||| ||       ||| ||||||||||||||||||||||| ||    
T  39822 aatcaagactctttgtcatttttaaaaagtcttgaactattcaatcaagatttttcatcacttaaaaaatgtcatgtggtattcaaaatcattcaaactt 39723  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| || |||||||||    
T  39722 cgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttctt 39624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 100213 - 100415
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||||||| |||| |||||||||||| || |||| ||       |||| |||||||||||||||||||||||||    
T  100213 aatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 100312  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
    | ||||||||||||||||||   |||||||||||||||||||| ||||||| |||||||||| || ||||||||||||||||||||||||||||||||||    
T  100313 caaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacatgagatttctta 100412  T
Q  201 gga 203  Q
    |||    
T  100413 gga 100415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 865 - 1063
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatt 99  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||    
T  865 aatcaagactctttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaatt 964  T
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||| ||| |||||||||| | ||||||||||||||||||||||||| || || ||||||| |  ||||||||||||||| |||| ||||||||||||    
T  965 tcgaagaattatttaataaatag-attttgatggattttgtgggattttgtagtgtaattttaactagaaaaagtctttcattaaaatatgagatttctt 1063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 4202 - 4337
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  4202 aatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattt 4301  T
Q  101 cgaaggattgtttaataaattggattttgatggatt 136  Q
     |||||||||||||||||||||||||||||||||||    
T  4302 tgaaggattgtttaataaattggattttgatggatt 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 4135 - 4172
Alignment:
Q  18 attttaaaaaagtcttgaggtattcaatcaagactttt 55  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  4135 attttgaaaaagtcttgtggtattcaatcaagactttt 4172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 13884 - 14023
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  13884 aatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 13983  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgt 140  Q
    | || |||||||||||||||||||||||||||||||||||    
T  13984 caaaagattgtttaataaattggattttgatggattttgt 14023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 14040 - 14072
Alignment:
Q  167 gaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||| ||||||||||||    
T  14040 gaaaaagtctttcatgaaaagatgagatttctt 14072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 103; Significance: 3e-51; HSPs: 4)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 21443 - 21304
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||    
T  21443 aatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattt 21344  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgt 140  Q
    | || |||||||||||||||||||||||||||||||||||    
T  21343 caaaagattgtttaataaattggattttgatggattttgt 21304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 21287 - 21255
Alignment:
Q  167 gaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||| ||||||||||||    
T  21287 gaaaaagtctttcatgaaaagatgagatttctt 21255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 139
Target Start/End: Original strand, 28463 - 28491
Alignment:
Q  111 tttaataaattggattttgatggattttg 139  Q
    |||||||||||||||||||||||||||||    
T  28463 tttaataaattggattttgatggattttg 28491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 28510 - 28542
Alignment:
Q  167 gaaaaagtctttcatgaaaacatgagatttctt 199  Q
    |||||||||||||||||||| ||||||||||||    
T  28510 gaaaaagtctttcatgaaaagatgagatttctt 28542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 744 - 540
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 100  Q
    |||||||| |||||||||||| |||||||| ||| ||||||||||||| ||| || |||| ||        | | |||||||||||||||||||||||||    
T  744 aatcaagattctttgtcatttaaaaaaagtattgtggtattcaatcaaaactcttaatcacttaaattttttttagtggtattcaaaatcattcaaattt 645  T
Q  101 cgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 200  Q
     |||||||||||||||||||   ||||||||||||||||||| |||||||| ||||||||| | |||||||||||||| | |||||||||||||||||||    
T  644 ggaaggattgtttaataaatcatattttgatggattttgtggaattttctagtgaaattttggtatgaaaaagtctttgacgaaaacatgagatttctta 545  T
Q  201 ggatt 205  Q
    |||||    
T  544 ggatt 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 24 - 199
Target Start/End: Complemental strand, 37089 - 36914
Alignment:
Q  24 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 123  Q
    ||||||||||| | ||||||||||||||| ||  ||||||       |||||| |||||||||||||||| ||||||||||| |||||||||||||||||    
T  37089 aaaaagtcttgtgctattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaaaatcattaaaatttcgaagcattgtttaataaattgg 36990  T
Q  124 attttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||| || |||||||||    
T  36989 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttctt 36914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37070 - 37027
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  37070 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 37027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 58262 - 58083
Alignment:
Q  21 ttaaaaaagtcttgaggtattcaatcaagactttt-catcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 119  Q
    |||||||||||||| |||||||| ||||||||||| ||||| ||       ||  |||||||||||||||||||||||||||||| ||||||||||||||    
T  58262 ttaaaaaagtcttgtggtattcagtcaagactttttcatcacttaaaaaaagttctgtggtattcaaaatcattcaaatttcgaatgattgtttaataaa 58163  T
Q  120 ttggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 199  Q
    ||||||||||||||||||||||||||||| || |  ||||||| || || ||| ||||||||||||| ||||||||||||    
T  58162 ttggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatctttcatgaaaagatgagatttctt 58083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 186
Target Start/End: Complemental strand, 3798 - 3712
Alignment:
Q  100 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaa 186  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| || || ||||||| || ||||| ||||||||| ||||    
T  3798 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaa 3712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 14892 - 14967
Alignment:
Q  131 tggattttgtgggattttctactgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 206  Q
    |||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||| |||||    
T  14892 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattg 14967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 172
Target Start/End: Original strand, 199905 - 199998
Alignment:
Q  79 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctactgaaattttagcatgaaaaa 172  Q
    ||||| |||||||||||||||| ||| || |||||||||||||| |||||||| ||||||||| |||||| || ||||| ||||| || |||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtgaaactttagtataaaaaa 199998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 233739 - 233795
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttca 57  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  233739 aatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 233795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 234587 - 234643
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttca 57  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  234587 aatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 234643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 222571 - 222627
Alignment:
Q  1 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttca 57  Q
    |||||| |||||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  222571 aatcaaaactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 222627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University