View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7088_low_35 (Length: 230)

Name: NF7088_low_35
Description: NF7088
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7088_low_35
NF7088_low_35
[»] chr8 (34 HSPs)
chr8 (1-82)||(42735523-42735604)
chr8 (1-72)||(23115414-23115485)
chr8 (1-71)||(7507145-7507215)
chr8 (1-69)||(41478989-41479057)
chr8 (1-78)||(26373687-26373765)
chr8 (1-71)||(42937250-42937320)
chr8 (1-72)||(24214837-24214908)
chr8 (1-72)||(24502017-24502088)
chr8 (1-68)||(26374674-26374741)
chr8 (1-73)||(32711528-32711600)
chr8 (1-72)||(2705065-2705136)
chr8 (1-72)||(5576867-5576938)
chr8 (1-68)||(32497376-32497443)
chr8 (1-71)||(42938363-42938433)
chr8 (1-69)||(43959549-43959618)
chr8 (1-72)||(8543408-8543480)
chr8 (2-77)||(4031505-4031580)
chr8 (1-68)||(14782381-14782448)
chr8 (1-68)||(43308525-43308592)
chr8 (1-68)||(44726056-44726123)
chr8 (6-77)||(9288701-9288772)
chr8 (1-68)||(10295627-10295694)
chr8 (1-68)||(31623588-31623655)
chr8 (1-78)||(18958973-18959050)
chr8 (1-66)||(39467713-39467778)
chr8 (1-77)||(42306031-42306107)
chr8 (1-68)||(7466228-7466295)
chr8 (1-68)||(16362089-16362156)
chr8 (1-68)||(18306207-18306274)
chr8 (1-78)||(4402990-4403067)
chr8 (1-82)||(43166894-43166975)
chr8 (1-72)||(14061545-14061616)
chr8 (1-68)||(19718127-19718194)
chr8 (19-68)||(39190035-39190084)
[»] chr1 (45 HSPs)
chr1 (1-72)||(49198514-49198585)
chr1 (1-72)||(953701-953772)
chr1 (1-72)||(28824619-28824690)
chr1 (1-77)||(22183247-22183323)
chr1 (1-77)||(45760257-45760333)
chr1 (1-85)||(47780488-47780572)
chr1 (1-72)||(19452097-19452168)
chr1 (1-72)||(21222030-21222101)
chr1 (1-72)||(35279554-35279625)
chr1 (1-72)||(50192798-50192869)
chr1 (1-72)||(730031-730101)
chr1 (1-72)||(6304501-6304572)
chr1 (2-69)||(47654601-47654669)
chr1 (1-72)||(33025394-33025465)
chr1 (1-71)||(35679375-35679445)
chr1 (1-61)||(31572410-31572470)
chr1 (1-72)||(49417966-49418037)
chr1 (1-77)||(14494089-14494162)
chr1 (1-68)||(6312460-6312527)
chr1 (1-68)||(9322747-9322814)
chr1 (1-68)||(15835300-15835367)
chr1 (1-68)||(29219174-29219241)
chr1 (1-68)||(29396635-29396702)
chr1 (1-66)||(48524208-48524272)
chr1 (1-61)||(25831153-25831213)
chr1 (1-68)||(8141375-8141442)
chr1 (1-68)||(9577679-9577746)
chr1 (1-68)||(25612043-25612110)
chr1 (21-72)||(28541386-28541437)
chr1 (1-79)||(28387640-28387718)
chr1 (1-66)||(42290732-42290797)
chr1 (1-49)||(19007593-19007641)
chr1 (1-85)||(32589201-32589285)
chr1 (1-65)||(46327931-46327995)
chr1 (1-68)||(45272473-45272540)
chr1 (1-68)||(49230772-49230839)
chr1 (1-65)||(18798380-18798444)
chr1 (1-49)||(48194612-48194660)
chr1 (1-49)||(48203370-48203418)
chr1 (1-68)||(5495343-5495410)
chr1 (1-44)||(42657741-42657784)
chr1 (1-68)||(48177709-48177776)
chr1 (1-71)||(27198271-27198341)
chr1 (1-56)||(29556006-29556057)
chr1 (1-49)||(51826850-51826898)
[»] chr3 (61 HSPs)
chr3 (1-73)||(3206443-3206515)
chr3 (1-72)||(996332-996403)
chr3 (1-72)||(12734087-12734158)
chr3 (1-72)||(19253715-19253786)
chr3 (1-72)||(10139393-10139464)
chr3 (1-72)||(20498098-20498168)
chr3 (1-72)||(52114418-52114489)
chr3 (1-71)||(37820724-37820794)
chr3 (1-73)||(22057650-22057723)
chr3 (1-72)||(40246732-40246803)
chr3 (6-72)||(33808054-33808120)
chr3 (1-68)||(6589455-6589523)
chr3 (1-72)||(35337622-35337694)
chr3 (1-68)||(29029898-29029965)
chr3 (1-72)||(29449107-29449178)
chr3 (14-72)||(33996751-33996809)
chr3 (1-79)||(10728846-10728924)
chr3 (18-72)||(16010751-16010805)
chr3 (1-70)||(18749460-18749529)
chr3 (1-68)||(1440199-1440265)
chr3 (1-68)||(10660427-10660494)
chr3 (1-68)||(36674377-36674444)
chr3 (1-51)||(44762284-44762334)
chr3 (1-77)||(31646531-31646607)
chr3 (1-68)||(23753633-23753700)
chr3 (1-72)||(25418254-25418325)
chr3 (1-68)||(27240490-27240557)
chr3 (1-68)||(39842676-39842743)
chr3 (1-72)||(51699726-51699797)
chr3 (1-79)||(50903490-50903568)
chr3 (2-68)||(52618213-52618279)
chr3 (3-68)||(15493980-15494045)
chr3 (1-66)||(44906760-44906825)
chr3 (18-71)||(54625481-54625534)
chr3 (1-44)||(11431442-11431485)
chr3 (1-68)||(48379050-48379117)
chr3 (1-68)||(50762297-50762364)
chr3 (1-68)||(51737972-51738039)
chr3 (1-68)||(52810312-52810379)
chr3 (16-71)||(55235076-55235131)
chr3 (1-71)||(38772266-38772336)
chr3 (1-42)||(17946248-17946289)
chr3 (1-49)||(10104907-10104955)
chr3 (1-49)||(10105028-10105076)
chr3 (1-49)||(10216054-10216102)
chr3 (1-49)||(10216175-10216223)
chr3 (1-49)||(10225683-10225731)
chr3 (1-49)||(10225804-10225852)
chr3 (1-68)||(539628-539695)
chr3 (1-44)||(2024123-2024166)
chr3 (1-44)||(6035299-6035342)
chr3 (1-68)||(20832887-20832954)
chr3 (1-44)||(28146273-28146316)
chr3 (1-44)||(54628759-54628802)
chr3 (1-66)||(6975643-6975708)
chr3 (1-68)||(12103524-12103589)
chr3 (9-77)||(26107144-26107212)
chr3 (1-69)||(27899277-27899345)
chr3 (1-68)||(40897035-40897103)
chr3 (1-49)||(45215415-45215463)
chr3 (36-72)||(52079881-52079917)
[»] chr2 (30 HSPs)
chr2 (1-77)||(24776240-24776316)
chr2 (1-71)||(22552012-22552082)
chr2 (1-70)||(14198825-14198894)
chr2 (1-70)||(44765667-44765736)
chr2 (1-73)||(20605041-20605113)
chr2 (1-72)||(12407270-12407341)
chr2 (1-72)||(16269581-16269652)
chr2 (1-72)||(31170873-31170944)
chr2 (1-72)||(9120058-9120129)
chr2 (1-72)||(35316952-35317023)
chr2 (1-72)||(305715-305787)
chr2 (1-72)||(1789332-1789403)
chr2 (1-79)||(378862-378940)
chr2 (1-72)||(26601449-26601520)
chr2 (1-72)||(19144914-19144985)
chr2 (1-60)||(32125152-32125211)
chr2 (1-77)||(26788669-26788745)
chr2 (1-73)||(43847535-43847607)
chr2 (1-68)||(28844449-28844516)
chr2 (1-68)||(43078569-43078636)
chr2 (1-67)||(28740532-28740598)
chr2 (1-78)||(3463555-3463632)
chr2 (1-68)||(215474-215541)
chr2 (1-54)||(3574755-3574808)
chr2 (1-77)||(33135508-33135584)
chr2 (6-68)||(43825085-43825147)
chr2 (1-68)||(7026497-7026565)
chr2 (32-67)||(5093317-5093352)
chr2 (1-79)||(10657289-10657367)
chr2 (100-176)||(7438090-7438166)
[»] chr7 (52 HSPs)
chr7 (1-72)||(44343642-44343713)
chr7 (1-71)||(39219581-39219651)
chr7 (1-71)||(43581336-43581406)
chr7 (1-72)||(8078285-8078356)
chr7 (1-72)||(30440686-30440757)
chr7 (1-69)||(20275509-20275577)
chr7 (1-72)||(12893298-12893369)
chr7 (1-72)||(18914981-18915052)
chr7 (1-72)||(34695121-34695192)
chr7 (1-71)||(973074-973145)
chr7 (1-71)||(31638766-31638836)
chr7 (1-70)||(32143165-32143235)
chr7 (1-71)||(47879059-47879129)
chr7 (1-71)||(47914157-47914227)
chr7 (1-77)||(43679354-43679431)
chr7 (1-69)||(727405-727473)
chr7 (12-72)||(34008905-34008965)
chr7 (13-72)||(31401586-31401645)
chr7 (1-73)||(7719507-7719579)
chr7 (1-72)||(40996895-40996967)
chr7 (1-77)||(28342225-28342301)
chr7 (1-68)||(29615010-29615077)
chr7 (2-72)||(9179766-9179836)
chr7 (1-66)||(46405677-46405742)
chr7 (1-81)||(10068340-10068420)
chr7 (1-68)||(509585-509652)
chr7 (1-68)||(7993029-7993096)
chr7 (1-68)||(23101185-23101252)
chr7 (1-68)||(39027984-39028051)
chr7 (1-68)||(48117839-48117906)
chr7 (1-79)||(17001269-17001347)
chr7 (1-78)||(21067759-21067836)
chr7 (1-77)||(3797303-3797379)
chr7 (1-77)||(9882482-9882558)
chr7 (1-77)||(18838267-18838343)
chr7 (1-77)||(29893001-29893077)
chr7 (1-77)||(43187589-43187665)
chr7 (1-68)||(32883668-32883735)
chr7 (1-68)||(33892497-33892564)
chr7 (1-44)||(37327838-37327881)
chr7 (1-68)||(39783986-39784053)
chr7 (1-44)||(41827225-41827268)
chr7 (3-53)||(10676626-10676676)
chr7 (1-72)||(7113343-7113417)
chr7 (1-64)||(28035050-28035114)
chr7 (1-68)||(47066631-47066699)
chr7 (1-44)||(3634240-3634283)
chr7 (1-44)||(33382548-33382591)
chr7 (1-68)||(37973020-37973087)
chr7 (1-55)||(19251439-19251493)
chr7 (1-66)||(29585446-29585511)
chr7 (3-44)||(40460955-40460996)
[»] chr6 (14 HSPs)
chr6 (1-72)||(2300984-2301055)
chr6 (1-72)||(6197724-6197795)
chr6 (1-71)||(1391513-1391583)
chr6 (1-77)||(29076480-29076557)
chr6 (1-77)||(29111453-29111530)
chr6 (1-72)||(7051733-7051804)
chr6 (1-68)||(31895588-31895655)
chr6 (1-82)||(14262679-14262760)
chr6 (1-68)||(34773301-34773368)
chr6 (1-49)||(708937-708985)
chr6 (1-49)||(5957148-5957196)
chr6 (1-49)||(7100186-7100234)
chr6 (1-49)||(8794396-8794444)
chr6 (1-44)||(28002581-28002624)
[»] chr5 (28 HSPs)
chr5 (1-72)||(7016943-7017014)
chr5 (1-81)||(21146947-21147027)
chr5 (1-72)||(32158145-32158216)
chr5 (1-72)||(43319135-43319207)
chr5 (1-71)||(33656289-33656359)
chr5 (1-71)||(6460682-6460752)
chr5 (1-71)||(27459195-27459265)
chr5 (1-69)||(5273207-5273276)
chr5 (1-70)||(16894106-16894174)
chr5 (1-69)||(9689553-9689620)
chr5 (1-68)||(4550503-4550570)
chr5 (1-68)||(14000351-14000418)
chr5 (1-68)||(37013807-37013874)
chr5 (2-68)||(22746190-22746256)
chr5 (1-71)||(27786210-27786280)
chr5 (1-68)||(7948563-7948630)
chr5 (1-68)||(4240698-4240765)
chr5 (3-68)||(1152351-1152416)
chr5 (1-49)||(26795526-26795574)
chr5 (1-49)||(26795647-26795695)
chr5 (1-49)||(26806590-26806638)
chr5 (1-44)||(1511598-1511641)
chr5 (1-43)||(139191-139233)
chr5 (1-79)||(5948991-5949069)
chr5 (3-44)||(13925848-13925889)
chr5 (1-30)||(14465472-14465501)
chr5 (1-49)||(26806711-26806759)
chr5 (1-44)||(28594456-28594500)
[»] chr4 (58 HSPs)
chr4 (1-71)||(7250020-7250090)
chr4 (1-71)||(24131219-24131289)
chr4 (1-72)||(1044698-1044769)
chr4 (1-72)||(22201903-22201974)
chr4 (1-72)||(42786655-42786727)
chr4 (1-72)||(25331019-25331090)
chr4 (1-72)||(39479604-39479675)
chr4 (1-71)||(28541587-28541657)
chr4 (1-71)||(37046699-37046769)
chr4 (1-77)||(41881330-41881407)
chr4 (1-69)||(31314975-31315043)
chr4 (1-72)||(40537392-40537463)
chr4 (1-70)||(46635889-46635959)
chr4 (1-62)||(32951083-32951144)
chr4 (1-72)||(30009924-30009995)
chr4 (1-72)||(37915673-37915744)
chr4 (1-68)||(23464845-23464914)
chr4 (3-71)||(49469210-49469278)
chr4 (1-70)||(1112784-1112852)
chr4 (1-52)||(34228829-34228880)
chr4 (9-71)||(25445983-25446044)
chr4 (1-71)||(25504886-25504955)
chr4 (1-81)||(5441283-5441363)
chr4 (3-78)||(20021226-20021301)
chr4 (1-68)||(27767948-27768015)
chr4 (10-69)||(53275727-53275786)
chr4 (1-68)||(54341036-54341103)
chr4 (1-71)||(7007262-7007332)
chr4 (1-71)||(27454337-27454407)
chr4 (1-67)||(28370859-28370925)
chr4 (1-67)||(49835060-49835126)
chr4 (1-71)||(55302732-55302802)
chr4 (1-77)||(23987139-23987215)
chr4 (1-72)||(41320638-41320707)
chr4 (1-68)||(467775-467842)
chr4 (1-68)||(30967546-30967613)
chr4 (1-68)||(51320813-51320880)
chr4 (1-68)||(54853715-54853782)
chr4 (1-77)||(19741155-19741230)
chr4 (1-68)||(29649914-29649981)
chr4 (1-68)||(32684192-32684259)
chr4 (1-44)||(37828649-37828692)
chr4 (1-83)||(44646709-44646791)
chr4 (1-66)||(29855576-29855641)
chr4 (3-68)||(49501762-49501827)
chr4 (3-68)||(49507827-49507892)
chr4 (1-49)||(38230794-38230842)
chr4 (28-68)||(56445638-56445678)
chr4 (1-68)||(24736336-24736402)
chr4 (1-44)||(28483899-28483942)
chr4 (1-44)||(28847116-28847159)
chr4 (1-68)||(36479436-36479501)
chr4 (28-67)||(44775947-44775986)
chr4 (1-77)||(28100596-28100673)
chr4 (1-42)||(32322009-32322050)
chr4 (3-72)||(41761978-41762047)
chr4 (1-46)||(53594111-53594156)
chr4 (1-65)||(36728059-36728123)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-72)||(39100-39171)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-72)||(100100-100171)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-71)||(38767-38837)
[»] scaffold0651 (1 HSPs)
scaffold0651 (1-69)||(8654-8722)
[»] scaffold0400 (1 HSPs)
scaffold0400 (1-77)||(15280-15353)
[»] scaffold0365 (1 HSPs)
scaffold0365 (1-77)||(15923-15996)
[»] scaffold0543 (1 HSPs)
scaffold0543 (1-68)||(10453-10520)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-78)||(13807-13884)
[»] scaffold0152 (1 HSPs)
scaffold0152 (1-78)||(21443-21520)
[»] scaffold1504 (1 HSPs)
scaffold1504 (1-68)||(756-823)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-68)||(58281-58348)
[»] scaffold0004 (1 HSPs)
scaffold0004 (25-71)||(102026-102072)
[»] scaffold0922 (1 HSPs)
scaffold0922 (1-68)||(4093-4160)
[»] scaffold0347 (1 HSPs)
scaffold0347 (1-44)||(14812-14855)
[»] scaffold0492 (2 HSPs)
scaffold0492 (11-68)||(12030-12087)
scaffold0492 (11-68)||(11999-12056)
[»] scaffold0287 (1 HSPs)
scaffold0287 (1-44)||(11802-11845)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-44)||(39864-39907)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-44)||(37070-37113)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-79)||(81796-81874)


Alignment Details
Target: chr8 (Bit Score: 74; Significance: 4e-34; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 42735523 - 42735604
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaatcat 82  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  42735523 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccccttaatcat 42735604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 23115414 - 23115485
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23115414 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 23115485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7507145 - 7507215
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7507145 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 7507215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 41479057 - 41478989
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41479057 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacac 41478989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26373765 - 26373687
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat-ccaatacaccccacttaa 78  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||    
T  26373765 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatcccaatacaccccccttaa 26373687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 42937320 - 42937250
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  42937320 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttaaaatcatgatccaatacaccc 42937250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 24214837 - 24214908
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  24214837 tgaataccacaagacttttttatgataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccc 24214908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 24502017 - 24502088
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  24502017 tgaataacacaagactttttcatgataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccc 24502088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 26374674 - 26374741
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26374674 tgaatatcacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaataca 26374741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 32711528 - 32711600
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccca 73  Q
    |||||||||||| ||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  32711528 tgaataccacaaaactttttcatgataaaaaagtcttttaaagtctcttagaatcatgatccaatacacccca 32711600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 2705065 - 2705136
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||||| ||||||||||| | ||| |||||||||||||||||||||    
T  2705065 tgaataccacaagactttttcatgataaaaaaatcttttaaaatcctttacaatcatgatccaatacacccc 2705136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 5576867 - 5576938
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||| |||||||| |||||| ||||||||||| |||||||||||| ||||||||||||||    
T  5576867 tgaataccacaagactatttcatgacaaaaaaatcttttaaaatcccttagaatcataatccaatacacccc 5576938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 32497443 - 32497376
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||||||||||||||||| ||||||||||||||||| || ||||||| | ||||||||||    
T  32497443 tgaataccacaagactttttcatgattaaaaagtcttttaaaatcccatagaatcctaatccaataca 32497376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 42938363 - 42938433
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| || |||||||| ||||    
T  42938363 tgaataccacaagactttttcatggtaaaaaagtcttttaaaatcccttaaaattataatccaataaaccc 42938433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 43959618 - 43959549
Alignment:
Q  1 tgaataccacaagactttttcatgataa-aaaagtcttttaaaattccttagaatcatgatccaatacac 69  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | ||| |||||||||| |||||||    
T  43959618 tgaataccacaagactttttcatgataaaaaaagtcttttaaaatcctttaaaatcatgatcaaatacac 43959549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 8543480 - 8543408
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaag-tcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||| ||||||| |||||||||||  ||||||||||| |||||||||||||||| ||||||||||    
T  8543480 tgaataccacaaaacttttttatgataaaaaaaatcttttaaaatcccttagaatcatgatctaatacacccc 8543408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 4031505 - 4031580
Alignment:
Q  2 gaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    |||||||||||||||||||||| || ||||||||||||||||| || ||||||| | |||||||||| ||| ||||    
T  4031505 gaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaatacatccccctta 4031580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 14782381 - 14782448
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  14782381 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 14782448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 43308525 - 43308592
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||| ||||||||||||| || |||||||||||||||||||| ||||||| | ||||||||||    
T  43308525 tgaataccagaagactttttcataattaaaaagtcttttaaaattccatagaatcctaatccaataca 43308592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 44726056 - 44726123
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  44726056 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 44726123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 9288701 - 9288772
Alignment:
Q  6 accacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    |||||||||||||||||| || |||||||||||||||||  | ||||||||| |||||||||| ||| ||||    
T  9288701 accacaagactttttcataattaaaaagtcttttaaaatctcatagaatcataatccaatacatccccctta 9288772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10295627 - 10295694
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||| ||||||||||| || ||||||| | ||||||||||    
T  10295627 tgaataccacaagactttttcataattaaaaactcttttaaaatcccatagaatcctaatccaataca 10295694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31623655 - 31623588
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||| ||||||||||||||||| || ||||| |||||||||||||| ||||||| | ||||||||||    
T  31623655 tgaatgccacaagactttttcataattaaaaaatcttttaaaattccatagaatcctaatccaataca 31623588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18958973 - 18959050
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaa 78  Q
    ||||||| ||||||||||||||| || |||||||||||||||||  | ||||||| | |||||||||| ||| |||||    
T  18958973 tgaatactacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaatacatcccccttaa 18959050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39467713 - 39467778
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaata 66  Q
    ||||||||||||||||||||||| || |||||||||||||||||  | ||||||| | ||||||||    
T  39467713 tgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaata 39467778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 42306031 - 42306107
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    |||||| |||||||||||||||| || |||||||||||||||||  | ||||||| | |||||||||| ||| ||||    
T  42306031 tgaatatcacaagactttttcataattaaaaagtcttttaaaatcacatagaatcctaatccaatacatccccctta 42306107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 7466295 - 7466228
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||| |||||||||||  | ||||||| | ||||||||||    
T  7466295 tgaataccacaagactttttcataattaaaaaatcttttaaaatctcatagaatcctaatccaataca 7466228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 16362156 - 16362089
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||| |||||||||| || ||||||||||||||||| || ||||||| | ||| ||||||    
T  16362156 tgaataccacaaaactttttcataattaaaaagtcttttaaaatcccatagaatcctaatctaataca 16362089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 18306207 - 18306274
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||| |||| ||||||||| ||||||| | || |||||||    
T  18306207 tgaataccacaagactttttcataattaaaaaatcttctaaaattccatagaatcctaattcaataca 18306274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4403067 - 4402990
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaa 78  Q
    ||||||||| ||||||||||||  || |||||||||||||||||  | || |||||| |||||||||| ||| |||||    
T  4403067 tgaataccaaaagactttttcacaattaaaaagtcttttaaaatctcatataatcataatccaatacatcccccttaa 4402990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 43166894 - 43166975
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaatcat 82  Q
    ||||||||||||||||||||| | || ||||||| ||||||||| || || |||| | ||||||||||  || |||||||||    
T  43166894 tgaataccacaagactttttcttaattaaaaagtattttaaaatcccataaaatcttaatccaatacattcctcttaatcat 43166975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 14061616 - 14061545
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||| |   |||||||||||||||||||||| || ||||   || |||||||||||    
T  14061616 tgaataccacaagacttttttactttaaaaaagtcttttaaaattccataaaatcccaatacaatacacccc 14061545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19718127 - 19718194
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||| || ||||||||||| || |||| |||||||||||| || ||||||| | ||||||||||    
T  19718127 tgaataccgcaggactttttcataattaaaaggtcttttaaaatcccatagaatcctaatccaataca 19718194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 39190035 - 39190084
Alignment:
Q  19 ttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||| || ||||||||||||||||| |||||||||| | ||||||||||    
T  39190035 ttcataattaaaaagtcttttaaaatcccttagaatcctaatccaataca 39190084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 7e-33; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 49198514 - 49198585
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49198514 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 49198585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 953772 - 953701
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  953772 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 953701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 28824619 - 28824690
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28824619 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 28824690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 22183323 - 22183247
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||    
T  22183323 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccccctta 22183247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 45760257 - 45760333
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  45760257 tgaataccacaagactttttcatgataaaaaaatcttttaaaatcccttagaatcatgatccaatacacccccctta 45760333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 47780572 - 47780488
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaatcatttt 85  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||  || |||||||||    
T  47780572 tgaataccacaagactttttcatgataaaaaaatcttttaaaatttcttagaatcatgatccaatacaccctcctaaatcatttt 47780488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 19452097 - 19452168
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19452097 tgaataccacaagactttttcaagataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 19452168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 21222101 - 21222030
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  21222101 tgaataccacaagactttttcatgataaaaaagccttttaaaatcccttagaatcatgatccaatacacccc 21222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 35279625 - 35279554
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  35279625 tgaataccacaagactttttcatgataaaaaagtcttttaaaatctcttagaatcatgatccaatacacccc 35279554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 50192798 - 50192869
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  50192798 tgaataccacaagactttttcataataaaaaagtcttttaaaattccttagaatcatgattcaatacacccc 50192869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 730101 - 730031
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  730101 tgaataccacaagactttttcatga-aaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 730031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 6304501 - 6304572
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||    
T  6304501 tgaataccacaagactttttcatgaaaaaaaagtcttttaaaatcctttagaatcatgatccaatacacccc 6304572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 47654601 - 47654669
Alignment:
Q  2 gaataccacaagactttttcatgataaaa-aagtcttttaaaattccttagaatcatgatccaatacac 69  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  47654601 gaataccacaagactttttcatgataaaaaaagtcttttaaaatcccttagaatcatgatccaatacac 47654669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 33025465 - 33025394
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||| ||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  33025465 tgaataccacaagattttttcatgataaaaaagtcttttaaattctcttagaatcatgatccaatacacccc 33025394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 35679375 - 35679445
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  35679375 tgaataccacaagactttttcattataaaaaagtcttttaaaatcccttaaaatcatgattcaatacaccc 35679445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31572410 - 31572470
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatc 61  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  31572410 tgaataccacaagactttttcatgataaaaaagtctcttaaaatcccttagaatcatgatc 31572470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 49418037 - 49417966
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||| |||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  49418037 tgaatatcacatgactttttcatgataaaaaagtcttttaaaatctcttagaatcatgatccaatatacccc 49417966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14494162 - 14494089
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    |||||||||||||| ||||||||||||||||||||||||||    ||||||||||||||||||||||||||| ||||    
T  14494162 tgaataccacaagattttttcatgataaaaaagtcttttaa---cccttagaatcatgatccaatacacccccctta 14494089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6312527 - 6312460
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  6312527 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 6312460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9322747 - 9322814
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  9322747 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 9322814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15835300 - 15835367
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  15835300 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 15835367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 29219241 - 29219174
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || |||||||||||||||||||| || |||| | ||||||||||    
T  29219241 tgaataccacaagactttttcataattaaaaagtcttttaaaattccatataatcctaatccaataca 29219174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 29396635 - 29396702
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  29396635 tgaataccacaagactttttcataattaaaaagtcttttaaaataccatagaatcctaatccaataca 29396702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 48524272 - 48524208
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaata 66  Q
    |||||||  ||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  48524272 tgaatactgcaaaacttttttatgataaaaa-gtcttttaaaattccttagaatcatgatccaata 48524208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25831153 - 25831213
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatc 61  Q
    |||||| || |||| |||||||| || ||||||||||||||||||||||||||||||||||    
T  25831153 tgaatatcaaaagattttttcataattaaaaagtcttttaaaattccttagaatcatgatc 25831213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8141375 - 8141442
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | || |||||||    
T  8141375 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaattcaataca 8141442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9577679 - 9577746
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||| |||||||||| || ||||||||||||||||| |||| ||||| | ||||||||||    
T  9577679 tgaataccacaaaactttttcatcattaaaaagtcttttaaaatcccttcgaatcctaatccaataca 9577746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 25612110 - 25612043
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||||| |||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  25612110 tgaataccacaagattttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 25612043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 28541437 - 28541386
Alignment:
Q  21 catgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  28541437 catgataaaaaaatcttttaaaatcgcttagaatcatgatccaatacacccc 28541386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 28387640 - 28387718
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaat 79  Q
    ||||||||| ||||||||||||| || ||||||||||||||||| || ||||||| | |||||||| | ||| ||||||    
T  28387640 tgaataccataagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataaatcccccttaat 28387718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 42290797 - 42290732
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaata 66  Q
    ||||||||||||||||||||||| || ||||| ||||||||||| || ||||||| | ||||||||    
T  42290797 tgaataccacaagactttttcataattaaaaaatcttttaaaatcccatagaatcttaatccaata 42290732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19007593 - 19007641
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||||||| |||||||||||| |||||||||||||||||||| ||||    
T  19007593 tgaataccactagactttttcattataaaaaagtcttttaaaatccctt 19007641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 32589201 - 32589285
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaatcatttt 85  Q
    ||||||| |||  ||||||||||||||||||||| |||||||||  | ||||||||| |||||||||| ||| || |||| ||||    
T  32589201 tgaatacaacataactttttcatgataaaaaagttttttaaaatctcatagaatcataatccaatacatccccctaaatcctttt 32589285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 46327995 - 46327931
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaat 65  Q
    |||||| |||||||||||||||| || ||||||||||||||||| || ||||||| | |||||||    
T  46327995 tgaataacacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaat 46327931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 45272540 - 45272473
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||| | |||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  45272540 tgaataccacaatattttttcataattaaaaagtcttttaaaatcccatagaatcttaatccaataca 45272473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 49230839 - 49230772
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||| ||||||||||| || ||||||||||||||||| || || |||| | ||||||||||    
T  49230839 tgaataccacatgactttttcataattaaaaagtcttttaaaatcccataaaatcctaatccaataca 49230772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18798444 - 18798380
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaat 65  Q
    ||||||||||||||| ||||||| || |||||||||||||||||  | ||||||| | |||||||    
T  18798444 tgaataccacaagacattttcataattaaaaagtcttttaaaatctcatagaatcctaatccaat 18798380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48194660 - 48194612
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||||||| ||||||||||||  ||||||||||||||||||| ||||    
T  48194660 tgaataccactagactttttcattctaaaaaagtcttttaaaatccctt 48194612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48203418 - 48203370
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||||||| ||||||||||||  ||||||||||||||||||| ||||    
T  48203418 tgaataccactagactttttcattctaaaaaagtcttttaaaatccctt 48203370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 5495343 - 5495410
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||| ||||||||||| || ||||||| |||||||||  | ||||||| | ||||||||||    
T  5495343 tgaataccacatgactttttcataattaaaaagttttttaaaatctcatagaatcctaatccaataca 5495410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42657784 - 42657741
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    |||||||||||||||||||| || || |||||||||||||||||    
T  42657784 tgaataccacaagacttttttataattaaaaagtcttttaaaat 42657741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 48177709 - 48177776
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || |||||   ||||||||| || ||||||| | ||||||||||    
T  48177709 tgaataccacaagactttttcataattaaaaaacattttaaaatcccatagaatcttaatccaataca 48177776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27198341 - 27198271
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||||||||||||||||| || |  ||||||||||||||||| ||||| | ||   |||||||||||||    
T  27198341 tgaataccacaagacttttttataaacaaaaagtcttttaaaatcccttaaagtctcaatccaatacaccc 27198271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29556057 - 29556006
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatca 56  Q
    |||||||||||| |||||||    |||||||||||||||||||| |||||||||||    
T  29556057 tgaataccacaaaacttttt----ataaaaaagtcttttaaaatcccttagaatca 29556006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 51826850 - 51826898
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||||||||||| ||||| || || ||||||||||||||||| ||||    
T  51826850 tgaataccacaagatttttttattattaaaaagtcttttaaaatccctt 51826898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 4e-31; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3206443 - 3206515
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccca 73  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3206443 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccca 3206515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 996332 - 996403
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  996332 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 996403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 12734087 - 12734158
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12734087 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 12734158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 19253786 - 19253715
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  19253786 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaataaacccc 19253715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 10139393 - 10139464
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||    
T  10139393 tgaataccacaagactttttcatgataaaaaagtattttaaaatcccttagaatcatgattcaatacacccc 10139464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 20498168 - 20498098
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  20498168 tgaataccacaagactttttcatgataaaaa-gtcttttaaaatcccttagaatcatgatccaatacacccc 20498098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 52114489 - 52114418
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  52114489 tgaataccacaagactttatcatgataaaaaaatcttttaaaattccttagaatcatgatccagtacacccc 52114418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 37820724 - 37820794
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||    
T  37820724 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcattatccaatataccc 37820794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 22057723 - 22057650
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaa-gtcttttaaaattccttagaatcatgatccaatacacccca 73  Q
    |||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  22057723 tgaataccacaatactttttcatgataaaaaaagtcttttaaaatcccttagaatcatgatccaatacacccca 22057650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 40246803 - 40246732
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||| ||||||||||| |||||||||  ||||||||||||||||||||||||||    
T  40246803 tgaataccacaagactttttcacgataaaaaagttttttaaaatctcttagaatcatgatccaatacacccc 40246732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 33808054 - 33808120
Alignment:
Q  6 accacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  33808054 accacaagacttttttatgataaaaaagtcttttaaaatcccttagaatcatgattcaatacacccc 33808120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6589523 - 6589455
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaa-gtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||    
T  6589523 tgaataccacaagactttttcatgataaaaaaagtcttttaaagtcccttagaatcatgatccaataca 6589455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 35337694 - 35337622
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatga-tccaatacacccc 72  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||    
T  35337694 tgaataccacaagactttttcataataaaaaagtcttttaaaatcccttagaatcatgattcaaatacacccc 35337622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 29029965 - 29029898
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||| | |||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  29029965 tgaataccacaatattttttcatgatataaaagtcttttaaaatcccttagaatcatgatccaataca 29029898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 29449107 - 29449178
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||| ||||||||||    
T  29449107 tgaataccacaagattttttcataataaaaaagtcttttaaaatcccttataatcatgatctaatacacccc 29449178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 33996751 - 33996809
Alignment:
Q  14 actttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  33996751 actttttcatgataaaaaagtctttcaaaatcccttagaatcatgatccaatacacccc 33996809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10728846 - 10728924
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaat 79  Q
    ||||||||||||||||||||||| || |||||||||||||||||||| ||||||  | |||||||||| ||| ||||||    
T  10728846 tgaataccacaagactttttcataattaaaaagtcttttaaaattccatagaatgctaatccaatacatcccccttaat 10728924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 16010805 - 16010751
Alignment:
Q  18 tttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  16010805 tttcatgataaaaaagtcttttaaaatcccttagaattatgatccaatacacccc 16010751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18749529 - 18749460
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacc 70  Q
    ||||||||||||||||||||||| || |||||||||||||||||||  ||||||| | ||||||||||||    
T  18749529 tgaataccacaagactttttcataattaaaaagtcttttaaaattctatagaatcctaatccaatacacc 18749460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 1440199 - 1440265
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||||||||||||||||| ||||||| |||||||||  ||||||||||||| ||||||||    
T  1440199 tgaataccacaagactttttcatgat-aaaaagtattttaaaatctcttagaatcatgacccaataca 1440265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 10660494 - 10660427
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  10660494 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcttaatccaataca 10660427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 36674377 - 36674444
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  36674377 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 36674444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44762284 - 44762334
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttag 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  44762284 tgaataccacaagactttttcattataaaaaagtcttttaaaatcccttag 44762334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 31646531 - 31646607
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | || ||||||| ||| ||||    
T  31646531 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaattcaatacatccccctta 31646607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23753633 - 23753700
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| |  ||||||| | ||||||||||    
T  23753633 tgaataccacaagactttttcataattaaaaagtcttttaaaatcctatagaatcctaatccaataca 23753700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 25418325 - 25418254
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||| |  |||||||||||||||| | |||||||||  |||||||||||||||||||| |||||    
T  25418325 tgaataccacaaaaaattttcatgataaaaaaattttttaaaatctcttagaatcatgatccaataaacccc 25418254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 27240490 - 27240557
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || |||||||||||||||||  | ||||||| | ||||||||||    
T  27240490 tgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 27240557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 39842676 - 39842743
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||| |||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  39842676 tgaataccacaaaactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 39842743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 51699726 - 51699797
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||| | |||||| |||||||||| |||||||||||   ||| |||||||||||||||||||||    
T  51699726 tgaataccacaaaattttttcttgataaaaaaatcttttaaaatcttttataatcatgatccaatacacccc 51699797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 50903490 - 50903568
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaat 79  Q
    |||||||||||||||||||||||  | ||||||| ||||||||| || ||||||||| || ||||||| ||| ||||||    
T  50903490 tgaataccacaagactttttcatacttaaaaagtattttaaaatcccatagaatcataattcaatacatcccccttaat 50903568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 52618213 - 52618279
Alignment:
Q  2 gaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||| ||||||    
T  52618213 gaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatctaataca 52618279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 15493980 - 15494045
Alignment:
Q  3 aataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||| |||||| |||||||| || ||||||||||||||||| ||||||||| || ||||||||||    
T  15493980 aatactacaagattttttcataattaaaaagtcttttaaaatcccttagaattataatccaataca 15494045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44906760 - 44906825
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaata 66  Q
    ||||||||||||||||||||||| || |||||||||||||||||  | ||||||| | ||||||||    
T  44906760 tgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaata 44906825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 54625534 - 54625481
Alignment:
Q  18 tttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    ||||||||||||||| |||| ||||||  |||||||||||||||||||||||||    
T  54625534 tttcatgataaaaaaatcttctaaaatctcttagaatcatgatccaatacaccc 54625481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11431485 - 11431442
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  11431485 tgaataccacaagactttttcataattaaaaagtcttttaaaat 11431442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 48379117 - 48379050
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||| ||||||||| || || ||||||||||||||||| |  ||||||||| ||||||||||    
T  48379117 tgaataccacgagactttttgataattaaaaagtcttttaaaatcctatagaatcataatccaataca 48379050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 50762297 - 50762364
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||| |||||||||| || ||||||||||||||||| || || |||| | ||||||||||    
T  50762297 tgaataccacaatactttttcataattaaaaagtcttttaaaatcccatataatcctaatccaataca 50762364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 51737972 - 51738039
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||||| |||||||| || |||||||||||||||||  | ||||||| | ||||||||||    
T  51737972 tgaataccacaagattttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 51738039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 52810379 - 52810312
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||| ||||||||||  | ||||||||||||||||| || ||||||| | ||||||||||    
T  52810379 tgaataccacaacactttttcatagttaaaaagtcttttaaaatcccatagaatcctaatccaataca 52810312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 55235131 - 55235076
Alignment:
Q  16 tttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||||| || |||||||||||||||||||||||||||| | ||||| |||||||    
T  55235131 tttttcataattaaaaagtcttttaaaattccttagaatcttaatccactacaccc 55235076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 38772336 - 38772266
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    ||||||||||||||||||||||| |  |||||||||||||||||  || |||||| | ||| |||||||||    
T  38772336 tgaataccacaagactttttcataaataaaaagtcttttaaaatctctcagaatcctaatctaatacaccc 38772266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17946289 - 17946248
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaa 42  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  17946289 tgaataccacaagactttttcataattaaaaagtcttttaaa 17946248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10104907 - 10104955
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||    
T  10104907 tgaataccacaagacttttttataatcaaaaagttttttaaaattcctt 10104955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10105028 - 10105076
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||||||||||| ||||| || |||||||||||||||||||| ||||    
T  10105028 tgaataccacaagatttttttataataaaaaagtcttttaaaatccctt 10105076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10216054 - 10216102
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||    
T  10216054 tgaataccacaagacttttttataatcaaaaagttttttaaaattcctt 10216102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10216175 - 10216223
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||||||||||||||||| || |||||||| ||||||||||| ||||    
T  10216175 tgaataccacaagacttttttataataaaaaaatcttttaaaatccctt 10216223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10225683 - 10225731
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||    
T  10225683 tgaataccacaagacttttttataatcaaaaagttttttaaaattcctt 10225731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10225804 - 10225852
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||| ||||||||||||| || |||||||||||||||||||| ||||    
T  10225804 tgaatagcacaagacttttttataataaaaaagtcttttaaaatccctt 10225852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 539628 - 539695
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||| ||||||||| || ||||| |||||||||||  ||||||| | | ||||||||||    
T  539628 tgaataccacaaggctttttcataattaaaaaatcttttaaaatctcttagaaccctaatccaataca 539695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2024166 - 2024123
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    ||||||||||||||||||||||| |||||||| | |||||||||    
T  2024166 tgaataccacaagactttttcataataaaaaaatattttaaaat 2024123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6035299 - 6035342
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    |||||||||||||| |||||||| || |||||||||||||||||    
T  6035299 tgaataccacaagattttttcataattaaaaagtcttttaaaat 6035342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20832954 - 20832887
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||| |||||||||| || ||||| |||||||||||  | ||||||| | ||||||||||    
T  20832954 tgaataccacaaaactttttcataattaaaaaatcttttaaaatctcatagaatcctaatccaataca 20832887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28146273 - 28146316
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    |||||||| || ||||||||||| ||||||||||||||||||||    
T  28146273 tgaataccccatgactttttcatcataaaaaagtcttttaaaat 28146316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 54628802 - 54628759
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    ||||||||||||||| ||||||| || |||||||||||||||||    
T  54628802 tgaataccacaagacgttttcataattaaaaagtcttttaaaat 54628759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6975708 - 6975643
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaata 66  Q
    |||||| |||||||||||||||| || ||||| | |||||||||| | ||||||| | ||||||||    
T  6975708 tgaatatcacaagactttttcatcattaaaaaatattttaaaatttcatagaatcctaatccaata 6975643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 12103589 - 12103524
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||| |||||||| |||||| || |||||||||||||||||  ||||||||  | ||||||||||    
T  12103589 tgaatacaacaagactatttcataattaaaaagtcttttaaaat--cttagaattctaatccaataca 12103524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 26107212 - 26107144
Alignment:
Q  9 acaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    ||||||||||||||| || ||||| |||||||||||  | ||||||| | |||||||||| ||| ||||    
T  26107212 acaagactttttcataattaaaaaatcttttaaaatctcatagaatcctaatccaatacatccccctta 26107144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 27899345 - 27899277
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacac 69  Q
    |||||||||||| |   |||||| ||||||||||||||||||||   |||||||||| ||| |||||||    
T  27899345 tgaataccacaaaaaaatttcataataaaaaagtcttttaaaatcatttagaatcataatctaatacac 27899277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 40897103 - 40897035
Alignment:
Q  1 tgaataccacaaga-ctttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||  |||||||| || ||||||| ||||||||| || ||||||| | ||||||||||    
T  40897103 tgaataccacaagatttttttcataattaaaaagtgttttaaaatcccatagaatcctaatccaataca 40897035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 45215415 - 45215463
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||||||||||| ||||| || || ||||||||||||||||| ||||    
T  45215415 tgaataccacaagatttttttattattaaaaagtcttttaaaatccctt 45215463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 52079917 - 52079881
Alignment:
Q  36 ttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||  ||||||||||||||||||||||||||    
T  52079917 ttttaaaatcacttagaatcatgatccaatacacccc 52079881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 4e-31; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24776316 - 24776240
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  24776316 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccccctta 24776240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22552012 - 22552082
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22552012 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 22552082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 14198825 - 14198894
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacc 70  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14198825 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 14198894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 44765736 - 44765667
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacc 70  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  44765736 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 44765667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 20605113 - 20605041
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccca 73  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  20605113 tgaataccacaagactttttcatgattaaaaagtcttttaaaatcccttagaatcatgatccaatacacccca 20605041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 12407341 - 12407270
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  12407341 tgaataccacaagactttttcatgataaaaaagtcttttaaaatctcttagaatcatgatccaatacacccc 12407270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 16269652 - 16269581
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  16269652 tgaataccacaagactttttcataataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 16269581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 31170873 - 31170944
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31170873 tgaatatcacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 31170944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 9120129 - 9120058
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9120129 tgaataccacatgattttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 9120058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 35317023 - 35316952
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||    
T  35317023 tgaataccacaagactttttcatgataaaaaagttttttaaaatcccttagaatcatgattcaatacacccc 35316952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 305715 - 305787
Alignment:
Q  1 tgaataccacaagactttttcatgataaaa-aagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  305715 tgaataccacaagactttttcatgataaaaaaagtcttttaaaatcgcttagaatcatgatccaatacacccc 305787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 1789403 - 1789332
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  1789403 tgaataccacaagacttttttatgataaaaaaatcttttaaaatctcttagaatcatgatccaatacacccc 1789332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 378940 - 378862
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaat 79  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||||||||| ||| ||||||    
T  378940 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccttataatcatgatccaatacatcccccttaat 378862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 26601449 - 26601520
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||| || |||||||||||||||||||| | |||||| ||||||||||||||||||    
T  26601449 tgaataccacaagactttttaataataaaaaagtcttttaaaatcctttagaaacatgatccaatacacccc 26601520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 19144985 - 19144914
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||| ||||||||||| | ||||||||| ||||||||||||  |||||||||||||    
T  19144985 tgaataccacaagacttttttatgataaaaaaatattttaaaatcccttagaatcatattccaatacacccc 19144914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 32125211 - 32125152
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgat 60  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||    
T  32125211 tgaataccacaagactttttcattataaaaaagtcttttaaaatcccttaaaatcatgat 32125152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 26788745 - 26788669
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | |||||||||| ||| ||||    
T  26788745 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaatacatccccctta 26788669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 43847607 - 43847535
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccca 73  Q
    ||||||| | |||||||||||| ||||||||||||||||||||| |||||||  ||||||| |||||||||||    
T  43847607 tgaatactagaagactttttcacgataaaaaagtcttttaaaatcccttagatacatgatctaatacacccca 43847535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 28844516 - 28844449
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  28844516 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 28844449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 43078636 - 43078569
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  43078636 tgaataccacaagactttttcataatcaaaaagtcttttaaaatcccatagaatcctaatccaataca 43078569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 28740532 - 28740598
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatac 67  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | |||||||||    
T  28740532 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaatac 28740598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3463632 - 3463555
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaa 78  Q
    |||||||||||||| |||||||| || |||||||||||||||||  | ||||||||| |||||||||| ||| |||||    
T  3463632 tgaataccacaagattttttcataattaaaaagtcttttaaaatctcatagaatcataatccaatacatcccccttaa 3463555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 215474 - 215541
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || |||||||||||||||||  | ||||||| | ||||||||||    
T  215474 tgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 215541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3574808 - 3574755
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaat 54  Q
    |||||||||||| |||||||||| || |||||||||||||||||||| ||||||    
T  3574808 tgaataccacaaaactttttcataattaaaaagtcttttaaaattccatagaat 3574755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 33135584 - 33135508
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    ||||||||| ||||||||||||| || ||||||||||||||||| |  ||||||| | |||||||||| ||| ||||    
T  33135584 tgaataccataagactttttcataattaaaaagtcttttaaaatcctatagaatcctaatccaatacatccccctta 33135508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 43825147 - 43825085
Alignment:
Q  6 accacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||||||||| || ||||| |||||||||||  | ||||||||| ||||||||||    
T  43825147 accacaagactttttcataattaaaaaatcttttaaaatctcatagaatcataatccaataca 43825085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 7026565 - 7026497
Alignment:
Q  1 tgaataccacaagacttttt-catgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||||||||||| ||| || |||||||||||||||||  | ||||||| | ||||||||||    
T  7026565 tgaataccacaagacttttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 7026497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 5093317 - 5093352
Alignment:
Q  32 agtcttttaaaattccttagaatcatgatccaatac 67  Q
    ||||||||||||| ||||||||||||||||||||||    
T  5093317 agtcttttaaaatcccttagaatcatgatccaatac 5093352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 10657367 - 10657289
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaat 79  Q
    ||||||||||| ||||||||||| |  |||||||| |||||||| || |||||||   |||||||||| ||| ||||||    
T  10657367 tgaataccacacgactttttcataactaaaaagtcatttaaaatcccatagaatccaaatccaatacatcccccttaat 10657289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 7438166 - 7438090
Alignment:
Q  100 aataactcaatgattcaaccaagaaattagtgatccattaacattttcgagtcaataacatgtccattttgaaaatt 176  Q
    |||||| || ||||||||||||  ||||| ||| ||| ||||||| ||| |||||||||  ||||||||| ||||||    
T  7438166 aataacccattgattcaaccaatcaattaatgaaccaataacattgtcgggtcaataactggtccatttttaaaatt 7438090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 44343642 - 44343713
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44343642 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 44343713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 39219581 - 39219651
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39219581 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaattatgatccaatacaccc 39219651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 43581336 - 43581406
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43581336 tgaataccacaagactttttcatgataaaaaagtcttttaaaattctttagaatcatgatccaatacaccc 43581406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 8078356 - 8078285
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8078356 tgaataccacaagacttttttatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 8078285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 30440757 - 30440686
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30440757 tgaataccacaagattttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 30440686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 20275509 - 20275577
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacac 69  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20275509 tgaataccacaagacttattcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacac 20275577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 12893369 - 12893298
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||    
T  12893369 tgaataccacaagactttttcatgaaaaaaaaatcttttaaaataccttagaatcatgatccaatacacccc 12893298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 18914981 - 18915052
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  18914981 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagatacatgatccaatacacccc 18915052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 34695192 - 34695121
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||    
T  34695192 tgaataccacaagactttttcataataaaaaagtcttttaaaatcccttagaatcatgattcaatacacccc 34695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 973145 - 973074
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaag-tcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  973145 tgaataccacaagactttttcatgataaaaaaaatcttttaaaatcccttagaatcatgatccaatacaccc 973074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 31638836 - 31638766
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  31638836 tgaataccacatgactttttcatgataaaaaagtcttttaaaatctcttagaatcatgattcaatacaccc 31638766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32143165 - 32143235
Alignment:
Q  1 tgaataccacaagactttttcatgataaaa-aagtcttttaaaattccttagaatcatgatccaatacacc 70  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  32143165 tgaatatcacaagactttttcatgataaaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 32143235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 47879129 - 47879059
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||| ||||||||||    
T  47879129 tgaataccacaagactttttcattataaataagtcttttaaaatcccttagaatcatgattcaatacaccc 47879059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 47914227 - 47914157
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||| ||||||||||    
T  47914227 tgaataccacaagactttttcattataaataagtcttttaaaatcccttagaatcatgattcaatacaccc 47914157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 43679431 - 43679354
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaag-tcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||| ||| ||||    
T  43679431 tgaataccacaagactttttcatgataaaaaaaatcttttaaaatcccttagaatcatgatccaatacatccctctta 43679354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 727473 - 727405
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacac 69  Q
    |||||||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||    
T  727473 tgaataccgcaagactttttcatgataaaaaagtcatttaaaatccattagaatcatgatccaatacac 727405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 34008965 - 34008905
Alignment:
Q  12 agactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  34008965 agactttttcatgataaaaaaatcttttaaaatcccttagaatcatgatccaatacacccc 34008905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 31401645 - 31401586
Alignment:
Q  13 gactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  31401645 gactttttcatgataaaaaagtcttttaaagttctttagaatcatgatccaatacacccc 31401586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7719507 - 7719579
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccca 73  Q
    |||||||||||||| |||||||||||||||||||||||||||||   ||| ||||||||||||||||| ||||    
T  7719507 tgaataccacaagaatttttcatgataaaaaagtcttttaaaatcttttacaatcatgatccaatacaaccca 7719579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 40996895 - 40996967
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaag-tcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||| |||||||||||||||  | ||||||||| |||||||||||||||||||||||||||    
T  40996895 tgaataccacaagactctttcatgataaaaaaaatattttaaaatcccttagaatcatgatccaatacacccc 40996967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 28342301 - 28342225
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | |||||||||| ||| ||||    
T  28342301 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaatacatccccctta 28342225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 29615010 - 29615077
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || |||||||||||||||||  | ||||||||| ||||||||||    
T  29615010 tgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcataatccaataca 29615077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 9179836 - 9179766
Alignment:
Q  2 gaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||| |||||||||||||||||||||||||||||||||||||   |||||||  | ||||||||||||||    
T  9179836 gaatatcacaagactttttcatgataaaaaagtcttttaaaatcttttagaatgctaatccaatacacccc 9179766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 46405677 - 46405742
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaata 66  Q
    ||||||||||| ||||||||||| || |||||||||||||||||||| ||||||| | ||||||||    
T  46405677 tgaataccacatgactttttcataattaaaaagtcttttaaaattccatagaatcctaatccaata 46405742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 10068420 - 10068340
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaatca 81  Q
    |||||| |||||||||||||||| || ||||||||||||||||| | | ||||||||  ||||||||| ||| ||||||||    
T  10068420 tgaatatcacaagactttttcataattaaaaagtcttttaaaatccatcagaatcatattccaatacatcccccttaatca 10068340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 509652 - 509585
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || || |||| | ||||||||||    
T  509652 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatccaataca 509585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 7993096 - 7993029
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| |  ||||||| | ||||||||||    
T  7993096 tgaataccacaagactttttcataattaaaaagtcttttaaaatcctatagaatcttaatccaataca 7993029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 23101252 - 23101185
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | |||| |||||    
T  23101252 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccgataca 23101185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 39028051 - 39027984
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || |||||||||||||||||||  || |||| | ||||||||||    
T  39028051 tgaataccacaagactttttcataattaaaaagtcttttaaaattctataaaatcctaatccaataca 39027984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 48117839 - 48117906
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||  | ||||||||||    
T  48117839 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatactaatccaataca 48117906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 17001269 - 17001347
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaat 79  Q
    ||||||||||||||||||||||| || ||||||| |||||||||  | ||||||| | |||||||||| ||| ||||||    
T  17001269 tgaataccacaagactttttcataattaaaaagttttttaaaatctcatagaatcctaatccaatacatcccccttaat 17001347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21067836 - 21067759
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaa 78  Q
    ||||||||||||||||||||||| || ||||| |||||||||||  | ||||||| | |||||||||| ||| |||||    
T  21067836 tgaataccacaagactttttcataattaaaaaatcttttaaaatctcatagaatcctaatccaatacatcccccttaa 21067759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3797303 - 3797379
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    |||||||| ||| ||| |||||| || ||||||||||||||||||| |||||||||| ||| |||||| ||| ||||    
T  3797303 tgaatacctcaaaactatttcataattaaaaagtcttttaaaattcattagaatcataatctaatacatccccctta 3797379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9882482 - 9882558
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    ||||||||| ||||||||||||| || ||||||||||||||||| |  ||||||| | |||||||||| ||| ||||    
T  9882482 tgaataccataagactttttcataattaaaaagtcttttaaaatcctatagaatcctaatccaatacatccctctta 9882558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18838343 - 18838267
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    ||||||||||||||| ||||||| || ||||||||||||| ||| || ||||||| | |||||||||| ||| ||||    
T  18838343 tgaataccacaagacattttcataattaaaaagtcttttataatcccatagaatcctaatccaatacatccccctta 18838267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 29893077 - 29893001
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    ||||||||||||||||||||||| || |||||||||||||||||  | ||||||| | ||| |||||| ||| ||||    
T  29893077 tgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatctaatacatccccctta 29893001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 43187589 - 43187665
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    |||||||||||||||| |||||| || |||||||||||||||||  ||||||||   ||||||||||| ||| ||||    
T  43187589 tgaataccacaagactctttcataattaaaaagtcttttaaaatctcttagaatttcgatccaatacatccccctta 43187665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 32883735 - 32883668
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||| ||||| |||||||||| || ||||| ||||||||||| || ||||||||| ||||||||||    
T  32883735 tgaatatcacaaaactttttcataattaaaaaatcttttaaaatcccatagaatcataatccaataca 32883668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 33892497 - 33892564
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||| |||||||||| || |||||||||||||||||  | ||||||| | ||||||||||    
T  33892497 tgaataccacaaaactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 33892564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37327881 - 37327838
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  37327881 tgaataccacaagactttttcataattaaaaagtcttttaaaat 37327838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 39784053 - 39783986
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||| ||||||||||| || ||||||||||||||||| || |||||||   ||||||||||    
T  39784053 tgaataccacatgactttttcataattaaaaagtcttttaaaatcccatagaatctcaatccaataca 39783986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41827268 - 41827225
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  41827268 tgaataccacaagactttttcataattaaaaagtcttttaaaat 41827225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 10676626 - 10676676
Alignment:
Q  3 aataccacaagactttttcatgataaaaaagtcttttaaaattccttagaa 53  Q
    |||||||||||| |||||||| || ||||||||||||||||| ||||||||    
T  10676626 aataccacaagattttttcataattaaaaagtcttttaaaatcccttagaa 10676676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 7113417 - 7113343
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaa-gtcttttaaaattccttagaatca---tgatccaatacacccc 72  Q
    ||||||||| || ||||| ||||||||||||| |||||||||||| |||||||||||   ||||||||||||||||    
T  7113417 tgaatacca-aatactttgtcatgataaaaaaagtcttttaaaatcccttagaatcatgatgatccaatacacccc 7113343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28035050 - 28035114
Alignment:
Q  1 tgaataccacaagactttttcatgat-aaaaaagtcttttaaaattccttagaatcatgatccaa 64  Q
    |||||||||||| ||||||| || || ||||||||||||||||||||| ||||||| | ||||||    
T  28035050 tgaataccacaaaactttttaataattaaaaaagtcttttaaaattccatagaatcctaatccaa 28035114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 47066699 - 47066631
Alignment:
Q  1 tgaataccacaagacttttt-catgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||||||||||| ||| || |||||||||||| |||| || ||||||| | ||||||||||    
T  47066699 tgaataccacaagacttttttcataattaaaaagtctttttaaatcccatagaatcctaatccaataca 47066631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3634283 - 3634240
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    |||||| ||||||||||||| || ||||||||||||||||||||    
T  3634283 tgaatatcacaagacttttttataataaaaaagtcttttaaaat 3634240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33382591 - 33382548
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    ||||||||| ||||||||||||| || |||||||||||||||||    
T  33382591 tgaataccataagactttttcataattaaaaagtcttttaaaat 33382548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 37973020 - 37973087
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||||||| |||||| || ||||||| |||||||||  | ||||||| | ||||||||||    
T  37973020 tgaataccacaagactctttcataattaaaaagtattttaaaatctcatagaatcctaatccaataca 37973087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19251493 - 19251439
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatc 55  Q
    ||||||| ||||||||||||| | || |||||||||||||||||  |||||||||    
T  19251493 tgaatactacaagactttttcgtaattaaaaagtcttttaaaatctcttagaatc 19251439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29585511 - 29585446
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaata 66  Q
    |||||||||||| |||||||||| || ||||| |||||||||||  | ||||||||| || |||||    
T  29585511 tgaataccacaaaactttttcataattaaaaaatcttttaaaatctcgtagaatcataattcaata 29585446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 40460955 - 40460996
Alignment:
Q  3 aataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    |||||||||| |||||||||| || |||||||||||||||||    
T  40460955 aataccacaaaactttttcataattaaaaagtcttttaaaat 40460996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 2300984 - 2301055
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2300984 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 2301055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 6197724 - 6197795
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  6197724 tgaataccacacgactttttcatgataaaaaagttttttaaaatcccttagaatcatgatccaatacacccc 6197795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1391583 - 1391513
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  1391583 tgaataccacaagactttttcatgataaaaaagtcatttaaaatcctttagaatcatgatccaatacaccc 1391513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 29076557 - 29076480
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaa-gtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||| ||||    
T  29076557 tgaatatcacaagactttttcatgataaaaaaagtcttttaaaatctcttagaatcatgatccaatacacccccctta 29076480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 29111530 - 29111453
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaa-gtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||| ||||    
T  29111530 tgaatatcacaagactttttcatgataaaaaaagtcttttaaaatctcttagaatcatgatccaatacacccccctta 29111453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 7051804 - 7051733
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||| |||||||||||||||||||||||||||||||||||||  ||||||||| | ||| || |||||||    
T  7051804 tgaatatcacaagactttttcatgataaaaaagtcttttaaaatctcttagaatcctaatcaaacacacccc 7051733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31895655 - 31895588
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  31895655 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 31895588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 14262679 - 14262760
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaatcat 82  Q
    |||||||||||||| |||||||| || ||||||||||||||||| || ||||||| | |||||||||| ||| |||| ||||    
T  14262679 tgaataccacaagattttttcataattaaaaagtcttttaaaatcccgtagaatcctaatccaatacatcccccttagtcat 14262760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34773368 - 34773301
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || || |||| | ||||||||||    
T  34773368 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatataatcctaatccaataca 34773301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 708985 - 708937
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||||    
T  708985 tgaataccactagattttttcattataaaaaagtcttttaaaatccctt 708937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5957196 - 5957148
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||||||| ||||||||| || |||||||||||||||||||| ||||    
T  5957196 tgaataccactagacttttttattataaaaaagtcttttaaaatccctt 5957148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7100234 - 7100186
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||||||| ||||||||||||  ||||||||||||||||||| ||||    
T  7100234 tgaataccactagactttttcattctaaaaaagtcttttaaaatccctt 7100186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8794396 - 8794444
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||||||| ||||||||||||  ||||||||||||||||||| ||||    
T  8794396 tgaataccactagactttttcattctaaaaaagtcttttaaaatccctt 8794444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28002624 - 28002581
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    ||||||| |||||| |||||||| ||||||||||||||||||||    
T  28002624 tgaatacgacaagattttttcattataaaaaagtcttttaaaat 28002581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 7016943 - 7017014
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7016943 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 7017014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 21147027 - 21146947
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaatca 81  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||    
T  21147027 tgaataccacacgactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccccctaaatca 21146947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 32158145 - 32158216
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  32158145 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgattcaatatacccc 32158216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 43319207 - 43319135
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaa-gtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  43319207 tgaataccacaagactttttcatgataaaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 43319135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 33656289 - 33656359
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  33656289 tgaataccacaagactttttcatgataaaaaaatcttttaaaatcccttaaaatcatgatccaatacaccc 33656359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 6460752 - 6460682
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||| ||||||||||    
T  6460752 tgaataccacaagactttttcattataaaaaaatcttttaaaatcccttagaatcatgattcaatacaccc 6460682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27459195 - 27459265
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    ||||||| || ||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  27459195 tgaatactacgagactttttcatgataaaaaagttttttaaaatccgttagaatcatgatccaatacaccc 27459265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 5273207 - 5273276
Alignment:
Q  1 tgaataccacaagactttt-tcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacac 69  Q
    |||||||||||||| |||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  5273207 tgaataccacaagatttttttcatgataaaaaagtcttttaaaatcccttaaaatcatgatccaatacac 5273276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16894106 - 16894174
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacc 70  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  16894106 tgaataccacaagaattttt-atgataaaaaagtcttttaaaatcccttagaattatgatccaatacacc 16894174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9689620 - 9689553
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacac 69  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| |||||||||||    
T  9689620 tgaataccacaagactttttcataataaaaa-gtctattaaaatcccttagaatcataatccaatacac 9689553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4550503 - 4550570
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  4550503 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 4550570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 14000351 - 14000418
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  14000351 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 14000418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 37013874 - 37013807
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || |||||||||||||||||  | ||||||||| ||||||||||    
T  37013874 tgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcataatccaataca 37013807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 22746256 - 22746190
Alignment:
Q  2 gaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||||||||||||| || |||||||||||||||||||  ||||||| | ||||||||||    
T  22746256 gaataccacaagactttttcataattaaaaagtcttttaaaattctatagaatcctaatccaataca 22746190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27786280 - 27786210
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||||||||||||||||| || |||||||||||||||||||| ||||  |||| | |||||||||||||    
T  27786280 tgaataccacaagacttttttataataaaaaagtcttttaaaatcccttgaaatcttaatccaatacaccc 27786210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 7948563 - 7948630
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||| |||||||||||| |||||||||||||||||||| |  ||||||| | ||||||||||    
T  7948563 tgaataccacgagactttttcataataaaaaagtcttttaaaatcctatagaatcctaatccaataca 7948630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4240698 - 4240765
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||| |||||||||| || |||||||||||||||||  | ||||||| | ||||||||||    
T  4240698 tgaataccacaaaactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 4240765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 1152351 - 1152416
Alignment:
Q  3 aataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||| |||||||| || |||||||||||||||||  | ||||||| | ||||||||||    
T  1152351 aataccacaagattttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 1152416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26795526 - 26795574
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||    
T  26795526 tgaataccacaagacttttttataatcaaaaagttttttaaaattcctt 26795574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26795647 - 26795695
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||||||||||| ||||| || |||||||||||||||||||| ||||    
T  26795647 tgaataccacaagatttttttataataaaaaagtcttttaaaatccctt 26795695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26806590 - 26806638
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||    
T  26806590 tgaataccacaagacttttttataatcaaaaagttttttaaaattcctt 26806638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1511598 - 1511641
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||    
T  1511598 tgaacaccacaagactttttcataataaaaatgtcttttaaaat 1511641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 139233 - 139191
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaa 43  Q
    ||||||| | ||||||||||||| |||||||||||||||||||    
T  139233 tgaatactaaaagactttttcattataaaaaagtcttttaaaa 139191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 5949069 - 5948991
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaat 79  Q
    |||||||||||| | |||||||| || |||| |||||||||||| || ||||||| | |||||| ||| ||| ||||||    
T  5949069 tgaataccacaaaaatttttcataattaaaaggtcttttaaaatcccatagaatcctaatccaacacatcccccttaat 5948991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 13925889 - 13925848
Alignment:
Q  3 aataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    ||||||||||||||||||||| || ||||| |||||||||||    
T  13925889 aataccacaagactttttcataattaaaaaatcttttaaaat 13925848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 14465472 - 14465501
Alignment:
Q  1 tgaataccacaagactttttcatgataaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  14465472 tgaataccacaagactttttcatgataaaa 14465501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26806711 - 26806759
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||| ||||||| ||||| || |||||||||||||||||||| ||||    
T  26806711 tgaatatcacaagatttttttataataaaaaagtcttttaaaatccctt 26806759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28594456 - 28594500
Alignment:
Q  1 tgaataccacaagactttttcatgat-aaaaaagtcttttaaaat 44  Q
    |||||||||||||||||||| || || ||||||||||||||||||    
T  28594456 tgaataccacaagacttttttataataaaaaaagtcttttaaaat 28594500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 6e-30; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7250020 - 7250090
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7250020 tgaataccacaagattttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 7250090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 24131219 - 24131289
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24131219 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 24131289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 1044769 - 1044698
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  1044769 tgaataccacaagactttttcatgataaaaaaatcttttaaaatcccttagaatcatgatccaatacacccc 1044698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 22201974 - 22201903
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22201974 tgaatatcacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 22201903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 42786727 - 42786655
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaa-gtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  42786727 tgaataccacaagactttttcatgataaaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 42786655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 25331090 - 25331019
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  25331090 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcttttagaatcatgatccaatacacccc 25331019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 39479604 - 39479675
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  39479604 tgaataccacaagacttttttatgataaaaaagtcttttaaaatttcttaaaatcatgatccaatacacccc 39479675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 28541657 - 28541587
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  28541657 tgaataccacaagactttttcataataaaaatgtcttttaaaatcccttagaatcatgatccaatacaccc 28541587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 37046699 - 37046769
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  37046699 tgaataccacaagacttttttatgataaaaatatcttttaaaattccttagaatcatgatccaatacaccc 37046769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 41881330 - 41881407
Alignment:
Q  1 tgaataccacaagactttttcatgataaaa-aagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  41881330 tgaataccacaagactttttcatgataaaaaaagtcttttaaaatcccttaaaatcatgatccaatacacccccctta 41881407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31314975 - 31315043
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacac 69  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  31314975 tgaataccacaatactttttcatgataaaaaaatcttttaaaatcccttagaatcatgatccaatacac 31315043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 40537392 - 40537463
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||| |||||| |||||||||||||||| ||||| |||||||||||||||||||||    
T  40537392 tgaataccacaagacttttttatgatacaaaagtcttttaaaatcccttacaatcatgatccaatacacccc 40537463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 46635889 - 46635959
Alignment:
Q  1 tgaataccacaagactttt-tcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacc 70  Q
    ||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  46635889 tgaataccacaagacttttttcatgataaaaaagtcttttaaaatctcttagaatcatgatccaatacacc 46635959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32951083 - 32951144
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatcc 62  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  32951083 tgaataccacaagactttttcattataaaaaagtcttttaaaatcccttagaatcatgatcc 32951144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 30009924 - 30009995
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||| | ||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  30009924 tgaatacaataagactttttcataataaaaatgtcttttaaaatcccttagaatcatgatccaatacacccc 30009995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 37915744 - 37915673
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||||| ||||||||||||||    
T  37915744 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcataatccaatacacccc 37915673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 23464914 - 23464845
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaag--tcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||    
T  23464914 tgaataccacaagactttttcatgataaaaaaaaatcttttaaaattccttagaatcataatccaataca 23464845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 49469278 - 49469210
Alignment:
Q  3 aataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    ||||||||||||||| ||||  | ||||||||||||||||||||||| |||||||||||||||||||||    
T  49469278 aataccacaagacttcttcacaaaaaaaaagtcttttaaaattccttggaatcatgatccaatacaccc 49469210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 1112852 - 1112784
Alignment:
Q  1 tgaataccacaagactttttcatgataa-aaaagtcttttaaaattccttagaatcatgatccaatacacc 70  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||    
T  1112852 tgaataacacaagactttttcatgataaaaaaagtcttttaaaat--cttagaatcatgatccaatacacc 1112784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 34228829 - 34228880
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttaga 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34228829 tgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttaga 34228880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 25446044 - 25445983
Alignment:
Q  9 acaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||    
T  25446044 acaagactttttcatgataaaaaagtcttttaaaatcccttaaaatcat-atccaatacaccc 25445983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 25504886 - 25504955
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | |||||| | |||||||||||||||    
T  25504886 tgaataccacaagactttttcatgataaaaaagtattttaaaatccattagaa-cctgatccaatacaccc 25504955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 5441363 - 5441283
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaatca 81  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | |||||||||| ||| || |||||    
T  5441363 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaatacatccccctaaatca 5441283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 20021301 - 20021226
Alignment:
Q  3 aataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaa 78  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || |||||||||| ||| |||||    
T  20021301 aataccacaagactttttcataattaaaaagtcttttaaaatcccttaaaattataatccaatacatcccccttaa 20021226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 27768015 - 27767948
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  27768015 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 27767948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 53275786 - 53275727
Alignment:
Q  10 caagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacac 69  Q
    ||||| ||||||||||||||||  | ||||||||||||||||||||||||||||||||||    
T  53275786 caagattttttcatgataaaaatattttttaaaattccttagaatcatgatccaatacac 53275727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 54341103 - 54341036
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  54341103 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 54341036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7007332 - 7007262
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||||||||| |||||||||| |||||||||||| ||||||| ||||| ||||||||| |||| |||||    
T  7007332 tgaataccacaaaactttttcattataaaaaagtctattaaaatcccttaaaatcatgattcaatccaccc 7007262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27454337 - 27454407
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||| ||||| | |||||||| |||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  27454337 tgaatatcacaaaattttttcattataaaacagtcttttaaaattccttaaaatcatgatccaatataccc 27454407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28370925 - 28370859
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatac 67  Q
    ||||||||||||||||||||||| || |||||||| |||||||||| |||||||| | |||||||||    
T  28370925 tgaataccacaagactttttcataattaaaaagtcctttaaaattcattagaatcctaatccaatac 28370859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 49835060 - 49835126
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatac 67  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | |||||||||    
T  49835060 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaatac 49835126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 55302802 - 55302732
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    ||||||||| || |||||||||| ||||||||||||| |||||| ||||| ||||||||| ||||||||||    
T  55302802 tgaataccataacactttttcattataaaaaagtcttctaaaatcccttaaaatcatgattcaatacaccc 55302732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 23987215 - 23987139
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || || |||| | |||||||||| ||| ||||    
T  23987215 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatccaatacatccccctta 23987139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 41320707 - 41320638
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    ||||||||||  ||||||||||| |||||||| |||||||||||   |||||||||||||||||||||||||    
T  41320707 tgaataccac--gactttttcataataaaaaaatcttttaaaatcttttagaatcatgatccaatacacccc 41320638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 467842 - 467775
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||| |||| |||||||||| || ||||| ||||||||||||||| |||||||| ||||||||||    
T  467842 tgaatacgacaaaactttttcataattaaaaaatcttttaaaattcctaagaatcataatccaataca 467775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30967546 - 30967613
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||| ||||||||||| || || |||||| ||||||||||    
T  30967546 tgaataccacaagactttttcataattaaaaaatcttttaaaatcccataaaatcataatccaataca 30967613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 51320880 - 51320813
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||| | |||||||| || |||||||||||||||||||| ||||||| | ||||||||||    
T  51320880 tgaataccacaaaattttttcataattaaaaagtcttttaaaattccgtagaatcctaatccaataca 51320813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 54853715 - 54853782
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||| | || |||||||||||||||||||| || |||| | ||||||||||    
T  54853715 tgaataccacaagactttttcgtaattaaaaagtcttttaaaattccataaaatcctaatccaataca 54853782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19741155 - 19741230
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    |||||||||||||| ||||||||||| |||||||||||||||||   |||||||||||||  |||||| ||| ||||    
T  19741155 tgaataccacaagattttttcatgat-aaaaagtcttttaaaatcttttagaatcatgattgaatacatccccctta 19741230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 29649914 - 29649981
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||| |||||||||| || |||||||||||||||||  | ||||||| | ||||||||||    
T  29649914 tgaataccacaaaactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 29649981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 32684192 - 32684259
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||  ||||||| | || |||||||    
T  32684192 tgaataccacaagactttttcataattaaaaagtcctttaaaattctatagaatcctaattcaataca 32684259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37828649 - 37828692
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  37828649 tgaataccacaagactttttcataattaaaaagtcttttaaaat 37828692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 44646791 - 44646709
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaatcatt 83  Q
    |||||||||||||| ||||| || || |||||||||||||||||  |||  |||| |||| ||||||||||| ||||| ||||    
T  44646791 tgaataccacaagatttttttatcattaaaaagtcttttaaaatctcttgaaatcttgattcaatacaccccccttaaacatt 44646709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29855641 - 29855576
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaata 66  Q
    |||||| |||||||||||||||| ||  |||| |||||||||||||| ||||||| | ||||||||    
T  29855641 tgaatatcacaagactttttcataatttaaaaatcttttaaaattccatagaatcctaatccaata 29855576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 49501762 - 49501827
Alignment:
Q  3 aataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||| || ||||| ||||||||||| || ||||||| | ||| ||||||    
T  49501762 aataccacaagactttttcataattaaaaaatcttttaaaatcccatagaatcctaatcaaataca 49501827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 49507827 - 49507892
Alignment:
Q  3 aataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||| || ||||| ||||||||||| || ||||||| | ||| ||||||    
T  49507827 aataccacaagactttttcataattaaaaaatcttttaaaatcccatagaatcctaatcaaataca 49507892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38230842 - 38230794
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattcctt 49  Q
    |||||||||| ||||||||||||  ||||||||||||||||||| ||||    
T  38230842 tgaataccactagactttttcattctaaaaaagtcttttaaaatccctt 38230794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 56445638 - 56445678
Alignment:
Q  28 aaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  56445638 aaaaagtcttttaaaattccttagaatcttaatccaataca 56445678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24736402 - 24736336
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||| |||||||| ||| ||| || ||||| |||||||||||||||||||||| | ||||||||||    
T  24736402 tgaatatcacaagacattt-cataattaaaaaatcttttaaaattccttagaatcctaatccaataca 24736336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28483942 - 28483899
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    |||||||| |||||||||||||| || |||||||||||||||||    
T  28483942 tgaatacctcaagactttttcataattaaaaagtcttttaaaat 28483899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28847116 - 28847159
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    |||||||||| ||||||||| || ||||||||||||||||||||    
T  28847116 tgaataccactagacttttttattataaaaaagtcttttaaaat 28847159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 36479436 - 36479501
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||| |||||||||||| ||||||||  | ||||||||||    
T  36479436 tgaataccacaagactttttcataattaaaaa-tcttttaaaatt-cttagaattctaatccaataca 36479501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 44775947 - 44775986
Alignment:
Q  28 aaaaagtcttttaaaattccttagaatcatgatccaatac 67  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  44775947 aaaaagtcttttaaaatccattagaatcatgatccaatac 44775986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 28100596 - 28100673
Alignment:
Q  1 tgaataccacaagactttttcatgat-aaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    |||||||||||||||||||| || || |||||||||||||||||  ||||  ||||   |||||||||||||| ||||    
T  28100596 tgaataccacaagacttttttataataaaaaaagtcttttaaaaccccttgaaatcccaatccaatacacccccctta 28100673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32322050 - 32322009
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaa 42  Q
    |||||||||||| |||||||||| || |||||||||||||||    
T  32322050 tgaataccacaaaactttttcataattaaaaagtcttttaaa 32322009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 41762047 - 41761978
Alignment:
Q  3 aataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||| || || | ||||||||||||||| | ||| ||||   ||||||||||||||    
T  41762047 aataccacaagacttttttataatcacaaagtcttttaaaatcctttaaaatctcaatccaatacacccc 41761978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 53594156 - 53594111
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattc 46  Q
    ||||| |||||||||||||  || ||||||||||||||||||||||    
T  53594156 tgaatgccacaagacttttctataataaaaaagtcttttaaaattc 53594111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 36728059 - 36728123
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaat 65  Q
    ||||||| ||||||||||||||| || ||||| |||||||||||   ||||||| || |||||||    
T  36728059 tgaatactacaagactttttcataattaaaaaatcttttaaaatctgttagaattataatccaat 36728123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 39100 - 39171
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  39100 tgaataccacaagactttttcatgataaaaaagtcttttaaaatccattagaatcatgatccaatacacccc 39171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 100171 - 100100
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 72  Q
    |||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  100171 tgaatatcagaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 100100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 38767 - 38837
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  38767 tgaataccacaagactttttcatgataaaaatatcttttaaaatcccttagaatcatgatccaatacaccc 38837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8722 - 8654
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacac 69  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  8722 tgaataccacaatactttttcatgataaaaaaatcttttaaaatcccttagaatcatgatccaatacac 8654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15280 - 15353
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    |||||||||||||| ||||||||||||||||||||||||||    ||||||||||||||||||||||||||| ||||    
T  15280 tgaataccacaagattttttcatgataaaaaagtcttttaa---cccttagaatcatgatccaatacacccccctta 15353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15923 - 15996
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccactta 77  Q
    |||||||||||||| ||||||||||||||||||||||||||    ||||||||||||||||||||||||||| ||||    
T  15923 tgaataccacaagattttttcatgataaaaaagtcttttaa---cccttagaatcatgatccaatacacccccctta 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 10520 - 10453
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  10520 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 10453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13884 - 13807
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaa 78  Q
    ||||||||||||||||||||||| || |||||||||||||||||  | ||||||| | |||||||||| ||| |||||    
T  13884 tgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaatacatcccccttaa 13807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 21443 - 21520
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaa 78  Q
    ||||||||||||||||||||||| || |||||||||||||||||  | ||||||| | |||||||||| ||| |||||    
T  21443 tgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaatacatcccccttaa 21520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 823 - 756
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||||||| |||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  823 tgaataccacaagaatttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 58281 - 58348
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || | ||||| | ||||||||||    
T  58281 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccatggaatcctaatccaataca 58348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 102072 - 102026
Alignment:
Q  25 ataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 71  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||    
T  102072 ataaaaaagtcttttaaaatcccttagaatcatgatctaatacaccc 102026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 4160 - 4093
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||||||||||||  || ||||||||||||||||| |  ||||||| | ||||||||||    
T  4160 tgaataccacaagactttttcaaaattaaaaagtcttttaaaatcctatagaatcctaatccaataca 4093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14855 - 14812
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  14855 tgaataccacaagactttttcataattaaaaagtcttttaaaat 14812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 12030 - 12087
Alignment:
Q  11 aagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    ||||||||||||| || ||||||||||||||||| || ||||||| | ||||||||||    
T  12030 aagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 12087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 12056 - 11999
Alignment:
Q  11 aagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaataca 68  Q
    |||||||||| || || ||||||||||||||||| || ||||||| | ||||||||||    
T  12056 aagactttttaattatgaaaaagtcttttaaaatcccatagaatcctaatccaataca 11999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11802 - 11845
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    |||||| ||||||||||||| || ||||||||||||||||||||    
T  11802 tgaatatcacaagacttttttataataaaaaagtcttttaaaat 11845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39864 - 39907
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    ||||||||||||||||||||||| || |||| ||||||||||||    
T  39864 tgaataccacaagactttttcataattaaaaggtcttttaaaat 39907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37070 - 37113
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaat 44  Q
    |||||| |||||||||||||||| || |||||||||||||||||    
T  37070 tgaatagcacaagactttttcataattaaaaagtcttttaaaat 37113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 81796 - 81874
Alignment:
Q  1 tgaataccacaagactttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacaccccacttaat 79  Q
    |||||||||||||||||||  |  | |||||||||||||||||| | ||| ||||   |||||||||||||| ||||||    
T  81796 tgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttaaaatctcaatccaatacaccccccttaat 81874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University