View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7088_low_8 (Length: 426)
Name: NF7088_low_8
Description: NF7088
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7088_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 71 - 409
Target Start/End: Complemental strand, 909825 - 909490
Alignment:
| Q |
71 |
ctatgtgtaagagcttgacagttgactctatggtgtagaaagacttattgctgcatgtttgttactgttaatcttcagtattataaactatattttgatc |
170 |
Q |
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| T |
909825 |
ctatgtgtaagagcttgacagttgactctatggtgtagaaagacttattgctgcatgtttgttactgttaatcttcagtattataaactatattttgatc |
909726 |
T |
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| Q |
171 |
tgcatccaattattcttattttcttgaatcaatgtggatgatgtagtatatcagattaagatgttatattgacatggagtttgagtaggtttaaagtgtc |
270 |
Q |
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| T |
909725 |
tgcatccaattattcttattttcttgaatcaatgtggatgatatagtatatcagattaagatgttatattgacatggagtttgagtaggtttaaagtgtc |
909626 |
T |
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| Q |
271 |
tccttgtttgttttgcaaaaatggtgttgcaatctcaagattgctataatcaatcagcaagtcttcgtttttatactccgggtctgcgtgttaggggagt |
370 |
Q |
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| T |
909625 |
tccttgtttgttttacaaaaatggtgttgcaatctcaagattgctataatcaat---caagtcttcgtttttatactccgggtctgcgtgttaggggagt |
909529 |
T |
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| Q |
371 |
ggctgttttgtgtggtacatactggatttgagacccttg |
409 |
Q |
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| T |
909528 |
ggctgtttcgtgtggtacatactggatttgagacccttg |
909490 |
T |
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