View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7089_low_5 (Length: 256)
Name: NF7089_low_5
Description: NF7089
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7089_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 5383761 - 5383994
Alignment:
| Q |
1 |
atgtagatgtttgtgcacagatttttaaattatagcgttatgacactgttggtgtataattattaaattttcgatataatatgctaatttccgaatgcta |
100 |
Q |
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| T |
5383761 |
atgtagatgtttgtgcacagatttttaaattacagcgttatgacactgttggtgtataattattaaattttcgatataatatgctaattgccgaatgcta |
5383860 |
T |
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| Q |
101 |
actgcttcggtatacttgcggttgtttattgaaggttctccgaattctagagggtgatatggtgatggacgcaaattacatttcaactccaggctatgat |
200 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5383861 |
actgctttggtatacttgcggttgtttattgaaggttctccgaattctagagggtgatatggtgatggacgcaaattacatttcaactccaggctatgat |
5383960 |
T |
|
| Q |
201 |
gttggaaacaggagcggtcgcctttggtcagagc |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
5383961 |
gttggaaacaggagcggtcgcctttggtcagagc |
5383994 |
T |
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