View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7092_low_14 (Length: 260)
Name: NF7092_low_14
Description: NF7092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7092_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 19 - 245
Target Start/End: Original strand, 22790284 - 22790512
Alignment:
| Q |
19 |
acataggtatggaaacccaaaccttttagacaattattcgtgttttcatttcataatatatttttctcatttgtcatcctcttctacaccattatttatc |
118 |
Q |
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| T |
22790284 |
acataggtatggaaacccaaacctttgagacaattattcgtgttttcatttcataatatatttttctcatttgtcatcctcttctacaccattatttatc |
22790383 |
T |
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| Q |
119 |
aatcatttctagaaatcaacttctatattgtgtttatattatatatatggtacgta--ttgcttgaatttggtgaggaataagaagaatacacacaagtc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
22790384 |
aatcatttctagaaatcaacttctatattgtgtttatattatatatatggtacgtatcttgcttgaatttggtgaggaataagaagaatacacacaagtc |
22790483 |
T |
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| Q |
217 |
tacaacctataactcttgattcagcacag |
245 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
22790484 |
tacaacctataactcttgattcagcacag |
22790512 |
T |
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