View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7092_low_6 (Length: 429)
Name: NF7092_low_6
Description: NF7092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7092_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 392; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 20 - 427
Target Start/End: Original strand, 36918951 - 36919358
Alignment:
| Q |
20 |
gaacccgcaagtattgtgtgagactggaaaatctttccaatctctttagcttccatctcaatttcagtcagaagctgaagacacaccctcaagttggcga |
119 |
Q |
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| T |
36918951 |
gaacccgcaagtattgtgtgagactggaaaatctttccaatctctttagcttccatctcaatttcagtcagaagctgaagacacaccctcaagttggcga |
36919050 |
T |
|
| Q |
120 |
aaaacttgaccatcgaaatttgtggaaactcgagaaacaagagggcaatctggttcacagacaatccaaatttgaccaaaaaaccaatcatcgatagtgt |
219 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36919051 |
aaaacttgaccatcaaaatttgtggaaactcgagaaacaagagggcaatctggttcacagacaatccaaatttgaccaaaaaaccaatcatcgatagtgt |
36919150 |
T |
|
| Q |
220 |
cttacctcctgattcttcgaaaacaatacaaggactacggtgaataatctcagccaactgtttctcactgaaaccagtatccgaaagcaagcataatagc |
319 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
36919151 |
cttacctcctgattcttcgaaaacaatacaaggactacggtgaataatctcagccaactgtttctcactgaaaccagtatccgaaagcaagcacaatagc |
36919250 |
T |
|
| Q |
320 |
tcaaccattaaaccccagttacaagaaacctcatccaaataatgccactgaatccaaccactatcaaaatcaccatcaccaccctttgcaacaatattct |
419 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36919251 |
tcaagcattaaaccccagttacaagaaacctcatccaaataatgccactgaatccaaccactatcaaaatcaccatcaccaccctttgcaacaatattct |
36919350 |
T |
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| Q |
420 |
tcgacatc |
427 |
Q |
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| T |
36919351 |
tcaacatc |
36919358 |
T |
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