View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7092_low_8 (Length: 414)

Name: NF7092_low_8
Description: NF7092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7092_low_8
NF7092_low_8
[»] chr8 (2 HSPs)
chr8 (17-399)||(15141891-15142274)
chr8 (37-116)||(11096511-11096590)
[»] chr2 (4 HSPs)
chr2 (37-383)||(21793893-21794237)
chr2 (37-383)||(5983820-5984163)
chr2 (180-383)||(45496456-45496656)
chr2 (180-383)||(45504198-45504398)
[»] chr6 (1 HSPs)
chr6 (37-383)||(7500772-7501116)
[»] chr5 (2 HSPs)
chr5 (60-383)||(9504058-9504379)
chr5 (13-399)||(28873033-28873414)
[»] chr4 (3 HSPs)
chr4 (37-383)||(16847271-16847615)
chr4 (37-168)||(53008652-53008783)
chr4 (37-197)||(11355725-11355886)
[»] scaffold0014 (1 HSPs)
scaffold0014 (180-383)||(61610-61810)
[»] chr1 (1 HSPs)
chr1 (22-107)||(28452603-28452688)


Alignment Details
Target: chr8 (Bit Score: 316; Significance: 1e-178; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 17 - 399
Target Start/End: Complemental strand, 15142274 - 15141891
Alignment:
Q  17 tccctacacatttaccggtgtttgaaggcaagaattacgatccatggatcgtgaagatgaaggttatcttcaagtttcaggatgttcttgaagtagtgaa 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  15142274 tccctacgcatttaccggtgtttgaaggcaagaattacgatcaatggatcgtgaagatgaaggttatctgcaggtttcaggatgttcttgaagtagtgaa 15142175  T
Q  117 tgatgatgtaccagcactagcatcaaatgctacagatgtgcaacaaacagcaaacagggatgcaa-gaagaaagatgggaaagccatgttcttgatgcat 215  Q
    ||||  |||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  15142174 tgatagtgtaccagcactagcatcgaatgctacagatatgcaataaacagcaaacagggatgcaaagaagaaagatgggaaagccatgttcttcatgcat 15142075  T
Q  216 cagagtgtgagcaatgagatatttgagaagatcatgcattatgaaagtgcaaaggaagagacttgggaagcattggaaaagttatattctggagatggta 315  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15142074 cagagtgtgagcaatgagatatttgagaagatcgtgcattatgaaagtgcaaaggaggagacttgggaagcattggaaaagttatattctggagatggta 15141975  T
Q  316 aattgaagaaggtgaggcttcaagttttgagaagacaatatgaagtttcgactatggaagaagaagaaaccataagtcaatact 399  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||    
T  15141974 aattgaagaaggtgaggcttcaagttttgagaagacagtatgaagttttgactatggaggaagaagaaaccataagtcaatact 15141891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 11096511 - 11096590
Alignment:
Q  37 tttgaaggcaagaattacgatccatggatcgtgaagatgaaggttatcttcaagtttcaggatgttcttgaagtagtgaa 116  Q
    |||||||||||||| |  |||| |||||||||||||||||| || ||||||| ||| |||||||| |||||||| |||||    
T  11096511 tttgaaggcaagaactttgatcaatggatcgtgaagatgaaagtgatcttcaggttccaggatgtacttgaagttgtgaa 11096590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 37 - 383
Target Start/End: Complemental strand, 21794237 - 21793893
Alignment:
Q  37 tttgaaggcaagaattacgatccatggatcgtgaagatgaaggttatcttcaagtttcaggatgttcttgaagtagtgaatgatgatgtaccagcactag 136  Q
    ||||||| |||||| |  |||| ||||||||||||||||||||| ||||||| ||| |||||||| |||||||| |||||||| |   |||||||||| |    
T  21794237 tttgaagacaagaactttgatcaatggatcgtgaagatgaaggtgatcttcaggttccaggatgtacttgaagttgtgaatgaagggataccagcactgg 21794138  T
Q  137 catcaaatgctacagatgtgcaacaaacagcaaacaggga--tgcaagaagaaagatgggaaagccatgttcttgatgcatcagagtgtgagcaatgaga 234  Q
    || | ||||| || ||||| |||||| ||||| | |  ||  ||||| ||||||||||| |||||  |||||||||||||||||||||| ||||||||||    
T  21794137 cagcgaatgcaactgatgtacaacaagcagcacataaagaattgcaa-aagaaagatggaaaagctttgttcttgatgcatcagagtgtaagcaatgaga 21794039  T
Q  235 tatttgagaagatcatgcattatgaaagtgcaaaggaagagacttgggaagcattggaaaagttatattctggagatggtaaattgaagaaggtgaggct 334  Q
    | |||||||||||||||||||||||||| ||   | | ||||| ||||| ||||| || ||  | |||||||| |||||||| |||||||||||||| ||    
T  21794038 tctttgagaagatcatgcattatgaaagcgc---gtaggagacatgggatgcattagagaaactgtattctggtgatggtaagttgaagaaggtgagact 21793942  T
Q  335 tcaagttttgagaagacaatatgaagtttcgactatggaagaagaagaa 383  Q
    ||||| |||||||||||| |||||||| | ||| |||||||||||||||    
T  21793941 tcaagctttgagaagacagtatgaagtgttgacaatggaagaagaagaa 21793893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 37 - 383
Target Start/End: Original strand, 5983820 - 5984163
Alignment:
Q  37 tttgaaggcaagaattacgatccatggatcgtgaagatgaaggttatcttcaagtttcaggatgttcttgaagtagtgaatgatgatgtaccagcactag 136  Q
    |||||||||||||| |  |||| |||||||||||| ||||| || |||||||  || |||||||| |||||||| |||||||| |   |||||||||| |    
T  5983820 tttgaaggcaagaactttgatcaatggatcgtgaaaatgaatgtgatcttcagattccaggatgtacttgaagttgtgaatgaagggataccagcactgg 5983919  T
Q  137 catcaaatgctacagatgtgcaacaaacagcaaacaggga--tgcaagaagaaagatgggaaagccatgttcttgatgcatcagagtgtgagcaatgaga 234  Q
    || | ||||| || ||||| |||||| ||||| | |  ||  || |||||||||||||| |||||  |||||||||||||| ||||||| ||||||||||    
T  5983920 cagcgaatgcaactgatgtacaacaagcagcacataaagaaatg-aagaagaaagatggaaaagctttgttcttgatgcat-agagtgtaagcaatgaga 5984017  T
Q  235 tatttgagaagatcatgcattatgaaagtgcaaaggaagagacttgggaagcattggaaaagttatattctggagatggtaaattgaagaaggtgaggct 334  Q
    | |||||||||| ||||||||||||||| || ||| |   ||| ||||| ||| | || ||  | |||||||| |||||||| |||||||||||||| ||    
T  5984018 tctttgagaagaccatgcattatgaaagcgcgaagca---gacatgggatgcaatagagaaactgtattctggtgatggtaagttgaagaaggtgagact 5984114  T
Q  335 tcaagttttgagaagacaatatgaagtttcgactatggaagaagaagaa 383  Q
    ||||| |||||||||||| |||||||| | ||| |||||||||||||||    
T  5984115 tcaagctttgagaagacagtatgaagtgttgacaatggaagaagaagaa 5984163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 180 - 383
Target Start/End: Complemental strand, 45496656 - 45496456
Alignment:
Q  180 aagaagaaagatgggaaagccatgttcttgatgcatcagagtgtgagcaatgagatatttgagaagatcatgcattatgaaagtgcaaaggaagagactt 279  Q
    |||||||||||||| |||||  |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || |||    |||| |    
T  45496656 aagaagaaagatggaaaagctctgttcttgatgcatcagagtgtaagcaatgagatctttgagaagatcatgcattatgaaagcgcgaag---aagacat 45496560  T
Q  280 gggaagcattggaaaagttatattctggagatggtaaattgaagaaggtgaggcttcaagttttgagaagacaatatgaagtttcgactatggaagaaga 379  Q
    |||| ||||| || ||  | |||||||| |||||||| |||||||||||||| ||||||| |||||||||||| |||||||| | ||| |||||||||||    
T  45496559 gggatgcattagagaaactgtattctggtgatggtaagttgaagaaggtgagacttcaagctttgagaagacagtatgaagtgttgacaatggaagaaga 45496460  T
Q  380 agaa 383  Q
    ||||    
T  45496459 agaa 45496456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 180 - 383
Target Start/End: Complemental strand, 45504398 - 45504198
Alignment:
Q  180 aagaagaaagatgggaaagccatgttcttgatgcatcagagtgtgagcaatgagatatttgagaagatcatgcattatgaaagtgcaaaggaagagactt 279  Q
    |||||||||||||| |||||  |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || |||    |||| |    
T  45504398 aagaagaaagatggaaaagctctgttcttgatgcatcagagtgtaagcaatgagatctttgagaagatcatgcattatgaaagcgcgaag---aagacat 45504302  T
Q  280 gggaagcattggaaaagttatattctggagatggtaaattgaagaaggtgaggcttcaagttttgagaagacaatatgaagtttcgactatggaagaaga 379  Q
    |||| ||||| || ||  | |||||||| |||||||| |||||||||||||| ||||||| |||||||||||| |||||||| | ||| |||||||||||    
T  45504301 gggatgcattagagaaactgtattctggtgatggtaagttgaagaaggtgagacttcaagctttgagaagacagtatgaagtgttgacaatggaagaaga 45504202  T
Q  380 agaa 383  Q
    ||||    
T  45504201 agaa 45504198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 37 - 383
Target Start/End: Complemental strand, 7501116 - 7500772
Alignment:
Q  37 tttgaaggcaagaattacgatccatggatcgtgaagatgaaggttatcttcaagtttcaggatgttcttgaagtagtgaatgatgatgtaccagcactag 136  Q
    |||||||||||||| |  |||| ||||||||||||||||||||| ||||||| | | |||||||| |||||||| |||||||| |   | || ||||| |    
T  7501116 tttgaaggcaagaactttgatcaatggatcgtgaagatgaaggtgatcttcagggtccaggatgtacttgaagttgtgaatgaagggattccggcactgg 7501017  T
Q  137 catcaaatgctacagatgtgcaacaaacagcaaacaggga-tgcaagaagaaagatgggaaagccatgttcttgatgcatcagagtgtgagcaatgagat 235  Q
    || | ||||| || ||||| |||||| ||||| | |  || |  |||||||||||||| |||||  | |||||||||||||||||||| |||||||||||    
T  7501016 cagcgaatgcaactgatgtacaacaagcagcacataaagaattgaagaagaaagatggaaaagctctattcttgatgcatcagagtgtaagcaatgagat 7500917  T
Q  236 atttgagaagatcatgcattatgaaagtgcaaaggaagagacttgggaagcattggaaaagttatattctggagatggtaaattgaagaaggtgaggctt 335  Q
     ||||||||||||||||||||||||||||| |||   ||||| ||||| ||||| || ||  | |||||||| |||||||| |||||||||||||| |||    
T  7500916 ctttgagaagatcatgcattatgaaagtgcgaag---gagacatgggatgcattagagaaactgtattctggtgatggtaagttgaagaaggtgagactt 7500820  T
Q  336 caagttttgagaagacaatatgaagtttcgactatggaagaagaagaa 383  Q
    |||| |||||||||||| |||||||| | ||| |||||| ||||||||    
T  7500819 caagctttgagaagacagtatgaagtgttgacaatggaataagaagaa 7500772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 4e-57; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 60 - 383
Target Start/End: Original strand, 9504058 - 9504379
Alignment:
Q  60 atggatcgtgaagatgaaggttatcttcaagtttcaggatgttcttgaagtagtgaatgatgatgtaccagcactagcatcaaatgctacagatgtgcaa 159  Q
    ||||||||||||||||||||| ||||||| ||| |||||||| |||||||| |||||||| |   |||||||||| ||| ||||||| || ||||| |||    
T  9504058 atggatcgtgaagatgaaggtgatcttcaggttccaggatgtacttgaagttgtgaatgaagggataccagcactggcagcaaatgcaactgatgtacaa 9504157  T
Q  160 caaaca--gcaaacagggatgcaagaagaaagatgggaaagccatgttcttgatgcatcagagtgtgagcaatgagatatttgagaagatcatgcattat 257  Q
    ||| ||  ||| | ||   || |||||||||||||| |||||  |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  9504158 caagcaacgcataaagaattg-aagaagaaagatggaaaagctctgttcttgatgcatcagagtgtaagcaatgagatctttgagaagatcatgcattat 9504256  T
Q  258 gaaagtgcaaaggaagagacttgggaagcattggaaaagttatattctggagatggtaaattgaagaaggtgaggcttcaagttttgagaagacaatatg 357  Q
    ||||| |  |||   ||||| |||||  |||| || || || |||| ||| |||||||| |||||||||||||| ||||||  |||||||||||| ||||    
T  9504257 gaaagcgtgaag---gagacatgggatacattagagaaattgtattatggtgatggtaagttgaagaaggtgagacttcaacctttgagaagacagtatg 9504353  T
Q  358 aagtttcgactatggaagaagaagaa 383  Q
    |||| | ||| |||||||||||||||    
T  9504354 aagtgttgacaatggaagaagaagaa 9504379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 13 - 399
Target Start/End: Complemental strand, 28873414 - 28873033
Alignment:
Q  13 aatatccctacacatttaccggtgtttgaaggcaagaattacgatccatggatcgtgaagatgaaggttatcttcaagtttcaggatgttcttgaagtag 112  Q
    ||||| ||| ||||| |||| || |||||||||||||| |  ||||  |||||||| ||||||||||  ||||||| ||| |||||| | |||||||| |    
T  28873414 aatattcctgcacatctacctgtttttgaaggcaagaactttgatcattggatcgtaaagatgaaggcgatcttcaggttccaggatatacttgaagttg 28873315  T
Q  113 tgaatgatgatgtaccagcactagcatcaaatgctacagatgtgcaacaaacagcaaacagggatgcaagaagaaagatgggaaagccatgttcttgatg 212  Q
    ||||||| | | || || |||||||| | ||||| || ||||| ||||||||| || | |  ||    ||||||||||||||||| | ||||||||||||    
T  28873314 tgaatgaaggtatagcaacactagcagcgaatgcaactgatgtacaacaaacaacacatattga----agaagaaagatgggaaaactatgttcttgatg 28873219  T
Q  213 catcagagtgtgagcaatgagatatttgagaagatcatgcattatgaaagtgcaaaggaagagacttgggaagcattggaaaagttatattctggagatg 312  Q
    ||||||||||| || |||||||| |||||||||||||| ||||||||||| || |||   ||||| ||||| |||||||| || ||  ||||||| ||||    
T  28873218 catcagagtgtaagaaatgagatgtttgagaagatcattcattatgaaagcgcgaag---gagacatgggatgcattggagaaattgcattctggggatg 28873122  T
Q  313 gtaaattgaagaag--gtgaggcttcaagttttgagaagacaatatgaagtttcgactatggaagaagaagaaaccataagtcaatact 399  Q
    |||| |||||||||  | ||| ||||||| |||||||||||||||||| || | ||| |||||||||||||||||  | ||||||||||    
T  28873121 gtaagttgaagaagatgagagacttcaagctttgagaagacaatatgaggtattgacaatggaagaagaagaaacagttagtcaatact 28873033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 3e-55; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 37 - 383
Target Start/End: Complemental strand, 16847615 - 16847271
Alignment:
Q  37 tttgaaggcaagaattacgatccatggatcgtgaagatgaaggttatcttcaagtttcaggatgttcttgaagtagtgaatgatgatgtaccagcactag 136  Q
    |||||||||||||| |  |||| ||||||| ||||||||||||| ||||||||||| |||| ||| | |||||| |||||||| |   |||||||||| |    
T  16847615 tttgaaggcaagaactttgatcaatggatcatgaagatgaaggtgatcttcaagttccaggttgtacctgaagttgtgaatgaagggataccagcactgg 16847516  T
Q  137 catcaaatgctacagatgtgcaacaaacagcaaacaggga-tgcaagaagaaagatgggaaagccatgttcttgatgcatcagagtgtgagcaatgagat 235  Q
     | | ||||| || |||||  ||||| ||||| | |  || |  ||||||||| |||| |||||  |||||||||||||||||||||| |||||||||||    
T  16847515 tagcgaatgcaactgatgtataacaagcagcacataaagaattgaagaagaaaaatggaaaagctctgttcttgatgcatcagagtgtaagcaatgagat 16847416  T
Q  236 atttgagaagatcatgcattatgaaagtgcaaaggaagagacttgggaagcattggaaaagttatattctggagatggtaaattgaagaaggtgaggctt 335  Q
     ||| |||||||||||||||||||||| || |||||   ||| | ||| ||||| || ||  |||||||||| ||||||||||||||||||||||| ||     
T  16847415 ctttaagaagatcatgcattatgaaagcgcgaagga---gacattggatgcattagagaaactatattctggtgatggtaaattgaagaaggtgagactg 16847319  T
Q  336 caagttttgagaagacaatatgaagtttcgactatggaagaagaagaa 383  Q
    |||| |||||||||||| |||||||| | ||| |||||||||||||||    
T  16847318 caagctttgagaagacattatgaagtgttgacaatggaagaagaagaa 16847271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 37 - 168
Target Start/End: Original strand, 53008652 - 53008783
Alignment:
Q  37 tttgaaggcaagaattacgatccatggatcgtgaagatgaaggttatcttcaagtttcaggatgttcttgaagtagtgaatgatgatgtaccagcactag 136  Q
    |||||||||||||| |  |||| ||||| ||||||||||||||| ||||||| ||| ||||||||  ||||||| |||||||| |   |||||||||| |    
T  53008652 tttgaaggcaagaactttgatcaatggaccgtgaagatgaaggtgatcttcaggttccaggatgtatttgaagttgtgaatgaagggataccagcactgg 53008751  T
Q  137 catcaaatgctacagatgtgcaacaaacagca 168  Q
    || | ||||| || ||||| |||||| |||||    
T  53008752 cagcgaatgcaactgatgtacaacaagcagca 53008783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 197
Target Start/End: Complemental strand, 11355886 - 11355725
Alignment:
Q  37 tttgaaggcaagaattacgatccatggatcgtgaagatgaaggttatcttcaagtttcaggatgttcttgaagtagtgaatgatgatgtaccagcactag 136  Q
    ||||| |||||| |||| |||| |||||||||||||||| |||| |||||||  |  || |||||||||||||| || |||||||  ||||||||| | |    
T  11355886 tttgatggcaaggattatgatcaatggatcgtgaagatggaggtgatcttcagataccaagatgttcttgaagttgttaatgatggggtaccagcattgg 11355787  T
Q  137 catcaaatgctacagatgtgcaacaaacagcaaacagggatgcaa-gaagaaagatgggaaa 197  Q
    ||  ||| || || |||||| ||||| | |||||||  || |||| |||||||| |||||||    
T  11355786 caagaaacgcaactgatgtgaaacaagctgcaaacaaagacgcaatgaagaaaggtgggaaa 11355725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 94; Significance: 9e-46; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 180 - 383
Target Start/End: Original strand, 61610 - 61810
Alignment:
Q  180 aagaagaaagatgggaaagccatgttcttgatgcatcagagtgtgagcaatgagatatttgagaagatcatgcattatgaaagtgcaaaggaagagactt 279  Q
    |||||||||||||| |||||  |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||   ||  |    
T  61610 aagaagaaagatggtaaagctgtgttcttgatgcatcagaatgtgagcaatgagatctttgagaagatcatgcattatgaaagtgcaaagga---gatat 61706  T
Q  280 gggaagcattggaaaagttatattctggagatggtaaattgaagaaggtgaggcttcaagttttgagaagacaatatgaagtttcgactatggaagaaga 379  Q
    |||| |||||||| || || |||  ||  ||||||||| |||| || ||||||||||||| | ||||||| ||||||||||| | ||| |||||||||||    
T  61707 gggatgcattggagaaattgtatgatgcggatggtaaactgaacaaagtgaggcttcaagctctgagaaggcaatatgaagtattgacaatggaagaaga 61806  T
Q  380 agaa 383  Q
    ||||    
T  61807 agaa 61810  T

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Target: chr1 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 28452688 - 28452603
Alignment:
Q  22 acacatttaccggtgtttgaaggcaagaattacgatccatggatcgtgaagatgaaggttatcttcaagtttcaggatgttcttga 107  Q
    |||||| |||| || ||| | ||||||| ||| |||| ||||||||||||||||||||| || |||  || ||| |||||||||||    
T  28452688 acacatgtaccagttttttatggcaagatttatgatcaatggatcgtgaagatgaaggtaatattccggtatcaagatgttcttga 28452603  T

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