View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7097_low_3 (Length: 310)

Name: NF7097_low_3
Description: NF7097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7097_low_3
NF7097_low_3
[»] chr2 (22 HSPs)
chr2 (124-290)||(25876195-25876364)
chr2 (124-290)||(36890961-36891130)
chr2 (124-281)||(19659877-19660037)
chr2 (124-290)||(16935398-16935566)
chr2 (124-290)||(17006058-17006226)
chr2 (124-290)||(23821881-23822051)
chr2 (124-290)||(23830960-23831130)
chr2 (124-290)||(21274332-21274501)
chr2 (138-290)||(9653195-9653339)
chr2 (175-290)||(24087529-24087644)
chr2 (24-89)||(9653079-9653144)
chr2 (188-290)||(20279416-20279522)
chr2 (24-89)||(21274232-21274296)
chr2 (192-290)||(45617580-45617682)
chr2 (213-290)||(22775385-22775465)
chr2 (213-290)||(22780763-22780843)
chr2 (26-83)||(36890862-36890919)
chr2 (24-83)||(28974062-28974121)
chr2 (24-83)||(32465871-32465930)
chr2 (192-290)||(24383629-24383731)
chr2 (24-83)||(4448308-4448367)
chr2 (28-83)||(27261819-27261874)
[»] chr7 (31 HSPs)
chr7 (124-289)||(12370116-12370281)
chr7 (124-290)||(26070540-26070709)
chr7 (124-290)||(26094327-26094496)
chr7 (124-290)||(32494330-32494498)
chr7 (124-290)||(3049390-3049560)
chr7 (124-286)||(3894831-3894996)
chr7 (124-287)||(111552-111718)
chr7 (124-290)||(42056574-42056743)
chr7 (125-240)||(2028776-2028890)
chr7 (194-290)||(13866110-13866209)
chr7 (125-197)||(13863207-13863279)
chr7 (124-290)||(2190471-2190629)
chr7 (24-89)||(3049590-3049655)
chr7 (24-89)||(3895032-3895097)
chr7 (24-89)||(2190369-2190434)
chr7 (148-275)||(28722111-28722243)
chr7 (24-89)||(2028928-2028993)
chr7 (24-89)||(42056472-42056537)
chr7 (24-83)||(16570181-16570240)
chr7 (24-83)||(16595422-16595481)
chr7 (24-83)||(26070439-26070498)
chr7 (24-83)||(26094226-26094285)
chr7 (23-83)||(12248295-12248355)
chr7 (24-83)||(11287430-11287489)
chr7 (24-83)||(49047849-49047908)
chr7 (26-86)||(12758997-12759057)
chr7 (24-83)||(13274800-13274859)
chr7 (26-89)||(32494231-32494294)
chr7 (26-83)||(111454-111511)
chr7 (24-73)||(13377552-13377601)
chr7 (26-79)||(39046800-39046853)
[»] chr5 (16 HSPs)
chr5 (124-290)||(20711878-20712047)
chr5 (124-290)||(21204727-21204896)
chr5 (124-270)||(21650519-21650666)
chr5 (24-89)||(20712083-20712148)
chr5 (24-89)||(21650702-21650767)
chr5 (175-290)||(21297316-21297431)
chr5 (26-89)||(21204933-21204996)
chr5 (24-83)||(1168379-1168438)
chr5 (29-83)||(21906733-21906787)
chr5 (213-290)||(28902178-28902258)
chr5 (213-290)||(28938573-28938653)
chr5 (26-83)||(21397102-21397159)
chr5 (24-83)||(23466470-23466529)
chr5 (183-213)||(14342368-14342398)
chr5 (26-83)||(2031823-2031880)
chr5 (26-79)||(24475600-24475653)
[»] chr4 (22 HSPs)
chr4 (124-290)||(30232793-30232962)
chr4 (124-290)||(52265784-52265953)
chr4 (124-290)||(12837472-12837642)
chr4 (124-290)||(15272597-15272766)
chr4 (124-290)||(15851632-15851806)
chr4 (23-83)||(12837374-12837434)
chr4 (23-89)||(30232670-30232736)
chr4 (192-290)||(15213783-15213885)
chr4 (24-89)||(15272495-15272560)
chr4 (192-286)||(19622341-19622436)
chr4 (192-290)||(54363453-54363555)
chr4 (24-83)||(23270109-23270168)
chr4 (24-83)||(27960984-27961043)
chr4 (29-83)||(18494508-18494562)
chr4 (26-83)||(820090-820146)
chr4 (192-275)||(17375454-17375540)
chr4 (26-83)||(55376774-55376831)
chr4 (24-83)||(13809685-13809744)
chr4 (24-83)||(16732182-16732241)
chr4 (24-83)||(21959638-21959697)
chr4 (24-73)||(15109524-15109573)
chr4 (26-79)||(53704910-53704963)
[»] chr1 (13 HSPs)
chr1 (124-290)||(27330028-27330197)
chr1 (124-290)||(21859814-21859982)
chr1 (124-231)||(35054621-35054727)
chr1 (23-89)||(27329929-27329995)
chr1 (23-89)||(35054763-35054829)
chr1 (24-83)||(51627839-51627898)
chr1 (213-290)||(16656625-16656705)
chr1 (24-83)||(21718241-21718300)
chr1 (26-73)||(22403287-22403334)
chr1 (24-83)||(35522494-35522553)
chr1 (24-83)||(49967663-49967722)
chr1 (26-79)||(41212086-41212139)
chr1 (213-264)||(18852900-18852954)
[»] scaffold0003 (1 HSPs)
scaffold0003 (124-290)||(147358-147527)
[»] scaffold0342 (1 HSPs)
scaffold0342 (124-290)||(5743-5911)
[»] chr3 (46 HSPs)
chr3 (124-290)||(8604813-8604982)
chr3 (124-290)||(11061282-11061454)
chr3 (136-290)||(13326641-13326798)
chr3 (124-290)||(54038408-54038576)
chr3 (136-290)||(3992353-3992508)
chr3 (124-290)||(17100454-17100623)
chr3 (124-290)||(28558009-28558177)
chr3 (124-290)||(45581434-45581602)
chr3 (124-288)||(54423817-54423984)
chr3 (124-290)||(16261263-16261432)
chr3 (124-240)||(19261112-19261228)
chr3 (124-240)||(38167769-38167885)
chr3 (124-281)||(11882308-11882467)
chr3 (124-290)||(53770842-53771011)
chr3 (124-270)||(2844013-2844161)
chr3 (124-290)||(23492175-23492344)
chr3 (24-89)||(38167921-38167986)
chr3 (124-195)||(17101237-17101308)
chr3 (24-89)||(2844198-2844263)
chr3 (24-89)||(3992557-3992622)
chr3 (24-89)||(16261460-16261525)
chr3 (24-89)||(17100660-17100725)
chr3 (24-89)||(17101345-17101410)
chr3 (24-83)||(23492386-23492445)
chr3 (24-89)||(19261014-19261079)
chr3 (24-89)||(53771048-53771113)
chr3 (23-83)||(12560410-12560470)
chr3 (192-290)||(40039089-40039191)
chr3 (24-83)||(11329136-11329195)
chr3 (24-83)||(17139521-17139580)
chr3 (24-83)||(14528187-14528246)
chr3 (175-290)||(15517619-15517736)
chr3 (26-83)||(12349907-12349963)
chr3 (233-290)||(30207204-30207261)
chr3 (26-89)||(6154508-6154570)
chr3 (24-83)||(14295451-14295510)
chr3 (24-79)||(16880140-16880195)
chr3 (24-86)||(17523064-17523127)
chr3 (26-89)||(45581638-45581701)
chr3 (24-83)||(50112226-50112285)
chr3 (26-89)||(54038309-54038372)
chr3 (24-83)||(54424025-54424084)
chr3 (24-73)||(12488901-12488950)
chr3 (26-79)||(13817532-13817585)
chr3 (26-83)||(22144449-22144506)
chr3 (52-89)||(28558213-28558250)
[»] scaffold0447 (2 HSPs)
scaffold0447 (124-290)||(4370-4534)
scaffold0447 (124-290)||(8984-9148)
[»] scaffold0383 (1 HSPs)
scaffold0383 (124-290)||(6978-7142)
[»] scaffold0034 (4 HSPs)
scaffold0034 (124-290)||(79664-79832)
scaffold0034 (124-290)||(45966-46136)
scaffold0034 (142-202)||(40552-40612)
scaffold0034 (26-89)||(79871-79934)
[»] scaffold0039 (3 HSPs)
scaffold0039 (124-290)||(19185-19353)
scaffold0039 (26-89)||(12705-12768)
scaffold0039 (26-89)||(19086-19149)
[»] scaffold0025 (2 HSPs)
scaffold0025 (124-240)||(146456-146572)
scaffold0025 (24-89)||(146608-146673)
[»] chr8 (24 HSPs)
chr8 (124-290)||(20481406-20481576)
chr8 (124-290)||(274245-274414)
chr8 (124-290)||(641435-641604)
chr8 (124-290)||(827241-827410)
chr8 (124-286)||(39115083-39115247)
chr8 (124-290)||(24386028-24386197)
chr8 (124-290)||(16039165-16039334)
chr8 (24-89)||(20481612-20481677)
chr8 (24-89)||(24385926-24385991)
chr8 (192-286)||(17502154-17502252)
chr8 (24-81)||(274458-274515)
chr8 (24-81)||(641334-641391)
chr8 (24-81)||(827140-827197)
chr8 (24-89)||(16039064-16039129)
chr8 (24-83)||(41246671-41246730)
chr8 (230-290)||(4233864-4233924)
chr8 (192-273)||(24239618-24239703)
chr8 (24-83)||(39446941-39447000)
chr8 (231-290)||(18118464-18118523)
chr8 (24-83)||(20567333-20567392)
chr8 (24-83)||(20573367-20573426)
chr8 (24-83)||(20573526-20573585)
chr8 (24-83)||(25122550-25122608)
chr8 (26-83)||(41506994-41507051)
[»] chr6 (23 HSPs)
chr6 (124-290)||(25651038-25651208)
chr6 (124-290)||(18570082-18570251)
chr6 (124-290)||(23994724-23994893)
chr6 (136-290)||(26089538-26089695)
chr6 (136-290)||(18002791-18002948)
chr6 (124-222)||(15742507-15742604)
chr6 (175-290)||(19175137-19175256)
chr6 (25-89)||(18777153-18777217)
chr6 (136-270)||(18776980-18777105)
chr6 (24-89)||(23994930-23994995)
chr6 (24-89)||(26089742-26089807)
chr6 (192-290)||(19168834-19168936)
chr6 (26-89)||(15742408-15742471)
chr6 (24-83)||(18002679-18002738)
chr6 (30-89)||(18570286-18570345)
chr6 (175-276)||(21931205-21931309)
chr6 (213-290)||(16136269-16136349)
chr6 (175-290)||(31467739-31467857)
chr6 (26-83)||(22440948-22441004)
chr6 (24-79)||(18398955-18399010)
chr6 (24-83)||(31628281-31628340)
chr6 (26-79)||(25744390-25744443)
chr6 (27-83)||(32898803-32898859)
[»] scaffold0077 (2 HSPs)
scaffold0077 (124-286)||(15750-15914)
scaffold0077 (26-89)||(15651-15714)
[»] scaffold0004 (4 HSPs)
scaffold0004 (124-289)||(193772-193940)
scaffold0004 (124-289)||(186813-186981)
scaffold0004 (24-89)||(186708-186773)
scaffold0004 (24-89)||(193670-193735)
[»] scaffold0706 (2 HSPs)
scaffold0706 (124-290)||(6822-6991)
scaffold0706 (28-89)||(6730-6791)
[»] scaffold0251 (4 HSPs)
scaffold0251 (124-290)||(13671-13840)
scaffold0251 (144-290)||(21665-21814)
scaffold0251 (24-89)||(13569-13634)
scaffold0251 (24-89)||(21543-21608)
[»] scaffold0244 (2 HSPs)
scaffold0244 (124-290)||(22788-22957)
scaffold0244 (38-89)||(22701-22752)
[»] scaffold0597 (2 HSPs)
scaffold0597 (124-290)||(1263-1432)
scaffold0597 (24-89)||(1161-1226)
[»] scaffold0103 (1 HSPs)
scaffold0103 (124-290)||(33466-33636)
[»] scaffold0032 (2 HSPs)
scaffold0032 (124-290)||(55382-55551)
scaffold0032 (24-89)||(55588-55653)
[»] scaffold0574 (2 HSPs)
scaffold0574 (124-290)||(9791-9960)
scaffold0574 (24-89)||(9690-9755)
[»] scaffold0037 (4 HSPs)
scaffold0037 (124-290)||(94777-94946)
scaffold0037 (154-290)||(25029-25169)
scaffold0037 (24-89)||(24903-24968)
scaffold0037 (24-89)||(94982-95047)
[»] scaffold0021 (4 HSPs)
scaffold0021 (124-290)||(88098-88267)
scaffold0021 (24-82)||(88289-88347)
scaffold0021 (24-83)||(132425-132484)
scaffold0021 (24-83)||(11700-11759)
[»] scaffold0521 (2 HSPs)
scaffold0521 (127-220)||(10970-11063)
scaffold0521 (230-290)||(10914-10974)
[»] scaffold0234 (2 HSPs)
scaffold0234 (144-290)||(17708-17857)
scaffold0234 (24-89)||(17587-17652)
[»] scaffold0175 (2 HSPs)
scaffold0175 (124-290)||(14750-14919)
scaffold0175 (24-89)||(14956-15021)
[»] scaffold0465 (2 HSPs)
scaffold0465 (138-288)||(10264-10417)
scaffold0465 (23-89)||(10148-10214)
[»] scaffold0303 (2 HSPs)
scaffold0303 (124-290)||(307-465)
scaffold0303 (25-89)||(212-276)
[»] scaffold1204 (1 HSPs)
scaffold1204 (192-290)||(250-352)
[»] scaffold0047 (1 HSPs)
scaffold0047 (183-276)||(20290-20387)
[»] scaffold0589 (1 HSPs)
scaffold0589 (24-83)||(7847-7906)
[»] scaffold0092 (1 HSPs)
scaffold0092 (24-83)||(3332-3391)
[»] scaffold0409 (2 HSPs)
scaffold0409 (192-290)||(1505-1607)
scaffold0409 (192-290)||(9760-9862)
[»] scaffold0240 (1 HSPs)
scaffold0240 (24-83)||(7582-7641)
[»] scaffold0452 (1 HSPs)
scaffold0452 (192-290)||(2945-3050)
[»] scaffold0480 (2 HSPs)
scaffold0480 (24-83)||(9057-9116)
scaffold0480 (24-83)||(5421-5480)
[»] scaffold0120 (2 HSPs)
scaffold0120 (24-83)||(21525-21584)
scaffold0120 (24-83)||(31224-31283)
[»] scaffold0095 (1 HSPs)
scaffold0095 (24-83)||(33903-33962)
[»] scaffold0022 (2 HSPs)
scaffold0022 (24-83)||(109603-109662)
scaffold0022 (25-83)||(112721-112776)
[»] scaffold1518 (1 HSPs)
scaffold1518 (145-201)||(188-244)
[»] scaffold0001 (1 HSPs)
scaffold0001 (23-83)||(70796-70856)
[»] scaffold1867 (1 HSPs)
scaffold1867 (24-83)||(157-216)
[»] scaffold0833 (1 HSPs)
scaffold0833 (24-83)||(3312-3371)
[»] scaffold0610 (1 HSPs)
scaffold0610 (24-83)||(751-810)
[»] scaffold0359 (1 HSPs)
scaffold0359 (26-73)||(11828-11875)
[»] scaffold0338 (1 HSPs)
scaffold0338 (24-83)||(9000-9059)
[»] scaffold0035 (2 HSPs)
scaffold0035 (24-83)||(109637-109696)
scaffold0035 (24-83)||(118138-118197)
[»] scaffold0014 (1 HSPs)
scaffold0014 (24-83)||(85345-85404)
[»] scaffold0008 (1 HSPs)
scaffold0008 (24-83)||(22704-22763)
[»] scaffold0673 (2 HSPs)
scaffold0673 (26-83)||(999-1056)
scaffold0673 (26-79)||(7025-7078)
[»] scaffold0116 (1 HSPs)
scaffold0116 (26-83)||(30104-30161)
[»] scaffold0091 (2 HSPs)
scaffold0091 (26-79)||(32220-32273)
scaffold0091 (26-79)||(42030-42083)
[»] scaffold0083 (2 HSPs)
scaffold0083 (26-79)||(14234-14287)
scaffold0083 (26-79)||(14894-14947)
[»] scaffold0016 (1 HSPs)
scaffold0016 (26-79)||(164232-164285)
[»] scaffold0396 (1 HSPs)
scaffold0396 (24-80)||(11883-11939)


Alignment Details
Target: chr2 (Bit Score: 144; Significance: 1e-75; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 25876195 - 25876364
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25876195 gtgaaaatgggtacttatgagttttgctcaaattgttggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaat 25876294  T
Q  224 tagatatgttgt---tgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25876295 tagatatgttgttgctgttgaattataccatgggtattccattttatgaagttgttgtttgtattggtga 25876364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 36890961 - 36891130
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  36890961 gtgaaaatgggtacttatgagttttgctcaaattattggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtattgttgaat 36891060  T
Q  224 tagata---tgttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||   |||||||||||||| |||  || |||||||||||||||||||| |||||||||||||||||    
T  36891061 tagatatgttgttgttgttgaatgatattatgggtattccattttatgaagtggttgtttgtattggtga 36891130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 124 - 281
Target Start/End: Complemental strand, 19660037 - 19659877
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19660037 gtgaaaatgggtatttatgagttttgctcaaattgttgaattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaat 19659938  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagttgttgtttg 281  Q
    ||||| |||||||   ||||||||||||||| |||||||||||| ||||||||||||||||    
T  19659937 tagatgtgttgttgttgttgaattataccatgggtattccatttcatgaagttgttgtttg 19659877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 16935566 - 16935398
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  16935566 gtgaaaatgggtacttatgagttttgctcaa-ttgttggattggaatattgtgttgttgaattatggttgaattcatgtctaaatgaagtattgttgaat 16935468  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||||||||   ||||||||||||||| ||||||||||||| ||||||||| | ||| ||||||||    
T  16935467 tagatatgttgttgttgttgaattataccatgggtattccattttgtgaagttgtggcttgaattggtga 16935398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 17006226 - 17006058
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  17006226 gtgaaaatgggtacttatgagttttgctcaa-ttgttggattggaatattgtgttgttgaattatggttgaattcatgtctaaatgaagtattgttgaat 17006128  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||||||||   ||||||||||||||| ||||||||||||| ||||||||| | ||| ||||||||    
T  17006127 tagatatgttgttgttgttgaattataccatgggtattccattttgtgaagttgtggcttgaattggtga 17006058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 23821881 - 23822051
Alignment:
Q  124 gtgaaaatgggcac-ttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaa 222  Q
    ||||||||||| || || |||||||||||||||||| || |||| |||||||||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  23821881 gtgaaaatgggtaccttgtgagttttgctcaaattgatgaattgtgatattgtgttgttgaattatggttgaattcatgtctaaattaagtattgttgaa 23821980  T
Q  223 ttagata---tgttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||   |||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  23821981 ttagatatgttgttgttgttgaattataccatgggtattccattttgtgaagttgttgtttgaattggtga 23822051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 23830960 - 23831130
Alignment:
Q  124 gtgaaaatgggcac-ttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaa 222  Q
    ||||||||||| || || |||||||||||||||||| || |||| |||||||||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  23830960 gtgaaaatgggtaccttgtgagttttgctcaaattgatgaattgtgatattgtgttgttgaattatggttgaattcatgtctaaattaagtattgttgaa 23831059  T
Q  223 ttagata---tgttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||   |||||||||||||||||| ||| ||||||||||||| ||||||||||||||| ||||||||    
T  23831060 ttagatatgttgttgttgttgaattatatcatgggtattccattttgtgaagttgttgtttgaattggtga 23831130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 21274332 - 21274501
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  21274332 gtgaaaatggatacttatgtgttttgctcaa-ttgttggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaag 21274430  T
Q  224 tagatatgtt---gttgttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||||||||||   ||| |||||| ||| |||  ||||||||||||||||| |  |||||||||||||||||    
T  21274431 tagatatgttgtggttcttgaatgatatcatgagtattccattttatgaaataagttgtttgtattggtga 21274501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 9653195 - 9653339
Alignment:
Q  138 ttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaattagatatgttgttg 237  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||    
T  9653195 ttatgtgttttgctcaa-ttgttggattgggatattgtgttgtt-----------gaattcatgtctaaatgaagtgttgttgaattagatatgttgttg 9653282  T
Q  238 tt---gaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||   |||| ||| |||  ||||||||||||||||| |  |||||||||| ||||||    
T  9653283 ttgtcgaatgataacatgagtattccattttatgaaataagttgtttgtaatggtga 9653339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 290
Target Start/End: Original strand, 24087529 - 24087644
Alignment:
Q  175 tgttgttaaattatggttgaattcatgtctaaatgaagt-gttgttgaattagatatgttgttgttgaattataccataggtattccattttatgaagtt 273  Q
    ||||||| | |||||||||||||||||| ||| |||||| ||||||||||| |||||||||||||||| || | |||| ||||||||||||| || ||||    
T  24087529 tgttgttgatttatggttgaattcatgtttaa-tgaagttgttgttgaattggatatgttgttgttgatttgttccatgggtattccattttgtggagtt 24087627  T
Q  274 gttgtttgtattggtga 290  Q
     ||||||| ||||||||    
T  24087628 attgtttggattggtga 24087644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 9653079 - 9653144
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  9653079 gatgttgatgttgttaagtgatgttatggatgctaattcatggcttgggtatgcatgattcataat 9653144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 290
Target Start/End: Complemental strand, 20279522 - 20279416
Alignment:
Q  188 tggttgaattcatgtctaaatgaagt-gttgttgaattagatatgtt---gttgttgaattataccataggtattccattttatgaagttgttgtttgta 283  Q
    ||||||||||||||| |||| | ||| ||||||||||| ||||||||   |||||||| || |||||| ||||||||||||| ||||||||||||||| |    
T  20279522 tggttgaattcatgtttaaacggagttgttgttgaattggatatgttattgttgttgatttgtaccatgggtattccattttgtgaagttgttgtttgaa 20279423  T
Q  284 ttggtga 290  Q
    |||||||    
T  20279422 ttggtga 20279416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 21274232 - 21274296
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||| |||||    
T  21274232 gatgttgttgttgttaagtgatgttatggatgctaattcatggcttgggta-gcatgattcataat 21274296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 290
Target Start/End: Original strand, 45617580 - 45617682
Alignment:
Q  192 tgaattcatgtctaaatgaagt-gttgttgaattagatatgttgttgttg---aattataccataggtattccattttatgaagttgttgtttgtattgg 287  Q
    ||||||||||| |||||||||| |||||||||||  || |||||||||||   |||| || ||| ||| ||||||||| ||||||||||||||| |||||    
T  45617580 tgaattcatgtttaaatgaagttgttgttgaattgaatgtgttgttgttgctgaattgtatcatgggtgttccattttgtgaagttgttgtttgaattgg 45617679  T
Q  288 tga 290  Q
    |||    
T  45617680 tga 45617682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 22775385 - 22775465
Alignment:
Q  213 tgttgttgaattagatatg---ttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||||||||||||||   |||||||||| || |||||| ||||| ||||||| ||||||||| ||||| ||||||||    
T  22775385 tgttgttgaattagatatgctattgttgttgatttgtaccatgggtataccattttgtgaagttgtagtttgaattggtga 22775465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 22780763 - 22780843
Alignment:
Q  213 tgttgttgaattagatatg---ttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||||||||||||||   |||||||||| || |||||| ||||| ||||||| ||||||||| ||||| ||||||||    
T  22780763 tgttgttgaattagatatgctattgttgttgatttgtaccatgggtataccattttgtgaagttgtagtttgaattggtga 22780843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 36890862 - 36890919
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||| ||||| ||||| |||||| | |||||||||||||||||||||||||    
T  36890862 tgttgttgttgctaagtgatgttgtggatgattattcatggcttgggtatgcatgatt 36890919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 28974121 - 28974062
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||||||||||| |||||||||    
T  28974121 gatgttgttgttgctaagtcatgttgttgatgataattcatggcttgggtttgcatgatt 28974062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 32465930 - 32465871
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||||| ||| ||||| | |||| ||||||||||||||||| |||||||||    
T  32465930 gatgttgttgttgtttagtcatgttgttgatgataattcatggcttgggtttgcatgatt 32465871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 290
Target Start/End: Complemental strand, 24383731 - 24383629
Alignment:
Q  192 tgaattcatgtctaaatgaag-tgttgttgaattagatatgttgt---tgttgaattataccataggtattccattttatgaagttgttgtttgtattgg 287  Q
    ||||||||||| ||||||||| |||||||||| | ||||||||||   || ||| || || ||| ||| ||||||||| |||| |||||||||| |||||    
T  24383731 tgaattcatgtttaaatgaagttgttgttgaaatggatatgttgttcctgctgatttgtatcatgggtgttccattttgtgaaattgttgtttgaattgg 24383632  T
Q  288 tga 290  Q
    |||    
T  24383631 tga 24383629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 4448308 - 4448367
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| || || ||||| | |||| ||||||||||||||||| |||||||||    
T  4448308 gatgttgttgttgatatgtcatgttgttgatgataattcatggcttgggtttgcatgatt 4448367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 27261874 - 27261819
Alignment:
Q  28 ttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||| ||||| ||||| | |||| ||||||||||||||||| |||||||||    
T  27261874 ttgttgttgctaagtcatgttgttgatgataattcatggcttgggtttgcatgatt 27261819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 2e-67; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 124 - 289
Target Start/End: Original strand, 12370116 - 12370281
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| |||||||||||||||||||||||| |||||| |||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||    
T  12370116 gtgaaaatgggtacttatgagttttgctcaaattgtgggattgagatattgtgtggttgaattatggttgagttcatgtctaaatgaagtgttgttgaat 12370215  T
Q  224 tagatatgttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtg 289  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||    
T  12370216 tagatatgttgttgttgaattataccatgggaattccattttatgaagtggttgtttgtattggtg 12370281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 26070540 - 26070709
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |    
T  26070540 gtgaaaatgggtacttatgagttttgctcaaattgttggattgagatattgtgttgttgaattatggttgaattcatgtctaaatgaagtattgttgatt 26070639  T
Q  224 tagatatg---ttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||||   |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  26070640 tagatatgtttttgttgttgaatgataccatgggtattccattttatgaagttgttgtttgtattggtga 26070709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 26094327 - 26094496
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |    
T  26094327 gtgaaaatgggtacttatgagttttgctcaaattgttggattgagatattgtgttgttgaattatggttgaattcatgtctaaatgaagtattgttgatt 26094426  T
Q  224 tagatatg---ttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||||   |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  26094427 tagatatgtttttgttgttgaatgataccatgggtattccattttatgaagttgttgtttgtattggtga 26094496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 32494330 - 32494498
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32494330 gtgaaaatgggtacttatgagttttgctcaa-ttgttggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaat 32494428  T
Q  224 tagatatgttgttgtt---gaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||||||||||||   |||| ||| ||| ||||||||||| | ||||||||| ||||| ||||||||    
T  32494429 tagatatgttgttgttgtagaatgatatcatgggtattccattgtgtgaagttgtggtttgaattggtga 32494498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 3049560 - 3049390
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||| ||||||||||||||||||||     
T  3049560 gtgaaaatgggtacttatgagttttgctcaaattgttggattggaacattgtgttgttgaattatggttgaattcatgcctaaatgaagtgttgttgaag 3049461  T
Q  224 tagatatgttgttgtt---gaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||||||||||||||||   |||| ||| ||| || || |||||||||||| |  |||||||||||||||||    
T  3049460 tagatatgttgttgttgtcgaatgatatcatgggcatcccattttatgaaataagttgtttgtattggtga 3049390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 124 - 286
Target Start/End: Complemental strand, 3894996 - 3894831
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||| | ||||||||||||||||||| |||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3894996 gtgaaaatgagtacttatgagttttgctcaa-ttgttggattgaaatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaat 3894898  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagt-tgttgtttgtattg 286  Q
    |||||||||||||   ||||||| ||| ||| |||||||||||||||||| |  |||||||||||||    
T  3894897 tagatatgttgttgttgttgaatgatatcatgggtattccattttatgaaataagttgtttgtattg 3894831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 124 - 287
Target Start/End: Original strand, 111552 - 111718
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||     
T  111552 gtgaaaatgagtacttatgagttttgctcaa-ttgttggattgggatatggtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaaa 111650  T
Q  224 tagata---tgttgttgttgaattataccataggtattccattttatgaagt-tgttgtttgtattgg 287  Q
    |||| |   |||||||||||||| ||| ||| |||||||||||||||||| |  ||||||||||||||    
T  111651 tagacatgttgttgttgttgaatgatatcatgggtattccattttatgaaataagttgtttgtattgg 111718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 42056574 - 42056743
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  | ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  42056574 gtgaaaatggataattatgtgttttgctcaa-ttgttggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaag 42056672  T
Q  224 tagatatgttgttg---ttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||||||||||||||   |||||| ||| |||  ||||||||||||||||| |  |||||||||||||||||    
T  42056673 tagatatgttgttgtccttgaatgatatcatgagtattccattttatgaaataagttgtttgtattggtga 42056743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 2028890 - 2028776
Alignment:
Q  125 tgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaatt 224  Q
    |||||||||  ||||||| ||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  2028890 tgaaaatggatacttatgtgttttgctcaa-ttgttggatttggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaagt 2028792  T
Q  225 agatatgttgttgttg 240  Q
    ||||||||||||||||    
T  2028791 agatatgttgttgttg 2028776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 194 - 290
Target Start/End: Original strand, 13866110 - 13866209
Alignment:
Q  194 aattcatgtctaaatgaagtgttgttgaattagatatgtt---gttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13866110 aattcatgtctaaatgaagtgttgttgaattagatatgttgttgttgttgaattataccatgggtattccattttatgaagttgttgtttgtattggtga 13866209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 13863207 - 13863279
Alignment:
Q  125 tgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaatt 197  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13863207 tgaaaatgggtacttatgagttttgctcaaattgttggattgggatattgtgttgttgaattatggttgaatt 13863279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 2190471 - 2190629
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| ||||||||||||||||||||||||||           ||||||||||||| ||||||||||||||||     
T  2190471 gtgaaaatggatacttatgtgttttgctcaa-ttgttggattgggatattgtgttgtt-----------gaattcatgtctacatgaagtgttgttgaag 2190558  T
Q  224 tagatatgttgttg---ttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||||||||||||||   |||||| ||| |||  ||||||||||||||||| |  |||||||||||||||||    
T  2190559 tagatatgttgttgttcttgaatgatatcatgagtattccattttatgaaataagttgtttgtattggtga 2190629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 3049655 - 3049590
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  3049655 gatgttgttgttgttaagtgatgttatggatgttaattcatggcttgggtatgcatgattcataat 3049590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 3895097 - 3895032
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  3895097 gatgttgttgttgttaagtgatgttatggatgctaattcatggcttgggtatgcatgattcataat 3895032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 2190369 - 2190434
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  2190369 gatgttgatgttgttaagtgatgttatggatgctaattcatggcttgggtatgcatgattcataat 2190434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 28722243 - 28722111
Alignment:
Q  148 tgctcaaattgttggattgggatattgtgttgttaaattatggtt-gaattcatgtctaaatgaagt-gttgttgaattagatatgttgttgttg---aa 242  Q
    |||||||||||||| |||| | |||  ||||||| |||| || |  |||||||||| |||||||||| |||||||||||||||||||||||||||   |     
T  28722243 tgctcaaattgttgaattgtgctatgttgttgttgaattgtgatgagaattcatgtttaaatgaagttgttgttgaattagatatgttgttgttgttgat 28722144  T
Q  243 ttataccataggtattccattttatgaagttgt 275  Q
    || |||||| ||||||||||||| |||||||||    
T  28722143 ttgtaccatgggtattccattttgtgaagttgt 28722111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 2028993 - 2028928
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    |||||||| |||||||||| |||||||||||| ||||||||| ||||||||||||||||| |||||    
T  2028993 gatgttgtcgttgttaagtgatgttatggatgctaattcatgacttgggtatgcatgattcataat 2028928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 42056472 - 42056537
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| || ||||| ||| ||||||||||||||||||||||||||| |||||    
T  42056472 gatgttgttgttgttaagtgatattatgaatgctaattcatggcttgggtatgcatgattcataat 42056537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 16570181 - 16570240
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||  |||||| |||||||||||||||||||||||||||    
T  16570181 gatgttgttgttgctaagtgatgtcgtggatgataattcatggcttgggtatgcatgatt 16570240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 16595481 - 16595422
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||  |||||| |||||||||||||||||||||||||||    
T  16595481 gatgttgttgttgctaagtgatgtcgtggatgataattcatggcttgggtatgcatgatt 16595422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 26070439 - 26070498
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| |||||| | |||||||||||||||||||||||||    
T  26070439 gatgttgttgttgctaagtgatgttgtggatgattattcatggcttgggtatgcatgatt 26070498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 26094226 - 26094285
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| |||||| | |||||||||||||||||||||||||    
T  26094226 gatgttgttgttgctaagtgatgttgtggatgattattcatggcttgggtatgcatgatt 26094285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 12248295 - 12248355
Alignment:
Q  23 ggatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    |||||||||||||| ||||| ||||| |||||| |||| |||| |||||||||||||||||    
T  12248295 ggatgttgttgttgctaagtgatgttgtggatgataatgcatgacttgggtatgcatgatt 12248355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 11287489 - 11287430
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||||||||||| |||||||||    
T  11287489 gatgttgttgttgctaagtcatgttgttgatgataattcatggcttgggtttgcatgatt 11287430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 49047849 - 49047908
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| | | || |||||||||||||||||||||||||||    
T  49047849 gatgttgttgttgctaagtgatgttgttgctgataattcatggcttgggtatgcatgatt 49047908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 12759057 - 12758997
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttat 86  Q
    ||||||||||||||||| ||||| | | || ||||||||||||||||| |||| |||||||    
T  12759057 tgttgttgttgttaagtcatgttgttggtgataattcatggcttgggtttgcaggatttat 12758997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 13274859 - 13274800
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| | |||| | ||||||||||| |||||||||||||    
T  13274859 gatgttgttgttgctaagtgatgttgttgatgatgattcatggctttggtatgcatgatt 13274800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 32494231 - 32494294
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||| ||| || | || |||| |||||||||||||| |||||||||||| |||||    
T  32494231 tgttgttgttgtttagtcatatgattgatgataattcatggcttgtgtatgcatgattcataat 32494294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 111454 - 111511
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||| || |  | |||| |||||||||||||||||||||||||||    
T  111454 tgttgttgttgtttagtcatatggttgatgataattcatggcttgggtatgcatgatt 111511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 13377601 - 13377552
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggt 73  Q
    ||||||||||||| ||||||||||| | |||| | |||||||||||||||    
T  13377601 gatgttgttgttgctaagtaatgttgttgatgatgattcatggcttgggt 13377552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 39046800 - 39046853
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcat 79  Q
    ||||||||||||| ||| ||||| | |||| ||||||||||||||||| |||||    
T  39046800 tgttgttgttgtttagtcatgttgttgatgataattcatggcttgggtttgcat 39046853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 4e-66; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 20712047 - 20711878
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20712047 gtgaaaatgggtactgatgagttttgctcaaattgttggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaat 20711948  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||||||||   ||||||||||||||| ||||||  |||||||||||||||| |||||||||||||    
T  20711947 tagatatgttgttgttgttgaattataccatgggtattttattttatgaagttgttatttgtattggtga 20711878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 21204896 - 21204727
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  21204896 gtgaaaatggatacttatgtgttttgctcaa-ttgttgaattgggatattgtgttgttaaattatggttaaattcatgtctaaatgaagtgttgttgaag 21204798  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    |||||||||||||   ||||||  ||| |||| ||||||||||||||||| |  |||||||||||||||||    
T  21204797 tagatatgttgttgttgttgaacgatatcataagtattccattttatgaaataagttgtttgtattggtga 21204727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 124 - 270
Target Start/End: Complemental strand, 21650666 - 21650519
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||     
T  21650666 gtgaaaatggatacttatgtgttttgctcaa-ttgttagattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaaatgttgttgaag 21650568  T
Q  224 tagata--tgttgttgttgaattataccataggtattccattttatgaa 270  Q
    ||||||  |||||||||||||| ||| |||  |||||||||||||||||    
T  21650567 tagatatttgttgttgttgaatgatatcatgagtattccattttatgaa 21650519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 20712148 - 20712083
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||| |||||    
T  20712148 gatgttgttgttgttaagtcatgttgttgatgttaattcatggcttgggtatgcatgattcataat 20712083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 21650767 - 21650702
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||| ||| |||||||||| |||||||||||||||| |||||    
T  21650767 gatgttgttgttgttaagtgatgttatgaatgctaattcatggtttgggtatgcatgattcataat 21650702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 290
Target Start/End: Original strand, 21297316 - 21297431
Alignment:
Q  175 tgttgttaaattatggttgaattcatgtctaaatgaagt-gttgttgaattagatatgttgttgttgaattataccataggtattccattttatgaagtt 273  Q
    ||||||||| |||||||| ||||||||| ||| |||||| |||||||||||||||| ||||||||||| || | |||| ||||||| ||||| || ||||    
T  21297316 tgttgttaatttatggttaaattcatgtttaa-tgaagttgttgttgaattagatacgttgttgttgatttgttccatgggtattcgattttgtggagtt 21297414  T
Q  274 gttgtttgtattggtga 290  Q
      |||||| ||||||||    
T  21297415 aatgtttggattggtga 21297431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 21204996 - 21204933
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||| |||||||  ||  ||||||||||||||||||||||||||| |||||    
T  21204996 tgttgttgttgttaagtgatgttatttattctaattcatggcttgggtatgcatgattcataat 21204933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 1168379 - 1168438
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||||||||||| |||||||||    
T  1168379 gatgttgttgttgctaagtcatgttgttgatgataattcatggcttgggtttgcatgatt 1168438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 21906787 - 21906733
Alignment:
Q  29 tgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    |||||||||||||| ||||| | |||| ||||||||||||||||| |||||||||    
T  21906787 tgttgttgttaagtcatgttgttgatgataattcatggcttgggtttgcatgatt 21906733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 28902258 - 28902178
Alignment:
Q  213 tgttgttgaattagatatgttgt---tgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||| | |||||||||||||   |||||| || |||||| ||||||||||||| ||||||||| ||||| ||||||||    
T  28902258 tgttgttaagttagatatgttgtcgttgttgatttgtaccatgggtattccattttgtgaagttgtagtttgaattggtga 28902178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 28938653 - 28938573
Alignment:
Q  213 tgttgttgaattagatatgttgt---tgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||| | |||||||||||||   |||||| || |||||| ||||||||||||| ||||||||| ||||| ||||||||    
T  28938653 tgttgttaagttagatatgttgtcgttgttgatttgtaccatgggtattccattttgtgaagttgtagtttgaattggtga 28938573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 21397159 - 21397102
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    |||| |||||||||||| ||||| | |||| ||||||||||||||||| |||||||||    
T  21397159 tgttattgttgttaagtcatgttgttgatgataattcatggcttgggtttgcatgatt 21397102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 23466529 - 23466470
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||| | | |||| || ||||||||||||||||||||||||    
T  23466529 gatgttgttgttgctaagtgatgatgttgatgatagttcatggcttgggtatgcatgatt 23466470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 14342368 - 14342398
Alignment:
Q  183 aattatggttgaattcatgtctaaatgaagt 213  Q
    |||||||||||||||||||||||||||||||    
T  14342368 aattatggttgaattcatgtctaaatgaagt 14342398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 2031880 - 2031823
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||| || || | |||| ||||||||||||||||| |||||||||    
T  2031880 tgttgttgttgtttagtcatattgttgatgataattcatggcttgggtttgcatgatt 2031823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 24475653 - 24475600
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcat 79  Q
    ||||||||||||| ||| ||||| | |||| ||||||||||||||||| |||||    
T  24475653 tgttgttgttgtttagtcatgttgttgatgataattcatggcttgggtttgcat 24475600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 4e-66; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 30232793 - 30232962
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30232793 gtgaaaatgggtacttatgagttttgctcaaattgttggattgagatattatgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaat 30232892  T
Q  224 tagata---tgttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||   |||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||    
T  30232893 tagatatgttgttgttgttgaatcataccatgggtatttcattttatgaagttgttgtttgtattggtga 30232962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 52265784 - 52265953
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| |||||||||||||||||||||||||  |||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  52265784 gtgaaaatgggtacttatgagttttgctcaaattgttaaattgagatattgtgttgttgaattatggttgaattcatgtcaaaatgaagtgttgttgaat 52265883  T
Q  224 tagatatgttgttgttg---aattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||||||||||||   ||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  52265884 tagatatgttgttgttgttaaattataccatgggtattccattttatgaagttgttgtttgaattggtga 52265953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 12837472 - 12837642
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  12837472 gtgaaaatgggtacttatgagttttgctcaaattgttggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaag 12837571  T
Q  224 tagatatgtt---gttgttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||||||||||   |||||||||| ||| ||| || || |||||||||||| |  ||||| |||||||||||    
T  12837572 tagatatgttgttgttgttgaatgatatcatgggcatcccattttatgaaataagttgtctgtattggtga 12837642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 15272597 - 15272766
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  | ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  15272597 gtgaaaatggataattatgtgttttgctcaa-ttgttggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaag 15272695  T
Q  224 tagatatgttgttg---ttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||||||||||||||   |||||| ||| |||  ||||||||||||||||| |  |||||||||||||||||    
T  15272696 tagatatgttgttgtccttgaatgatatcatgagtattccattttatgaaataagttgtttgtattggtga 15272766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 15851632 - 15851806
Alignment:
Q  124 gtgaaaatgggcac-ttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagt----gttgt 218  Q
    ||||||||||| || || |||||||||||||||||| || |||  |||||||||||||| |||||||||||||||||||| ||||||||||     ||||    
T  15851632 gtgaaaatgggtaccttgtgagttttgctcaaattgatgaattatgatattgtgttgttgaattatggttgaattcatgtttaaatgaagtattaattgt 15851731  T
Q  219 tgaattagata---tgttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||||||   |||||||||||||||||||||| | ||||||||||| ||||||||||||||| ||||||||    
T  15851732 tgaattagatatgttgttgttgttgaattataccatggttattccattttgtgaagttgttgtttgaattggtga 15851806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 12837374 - 12837434
Alignment:
Q  23 ggatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12837374 ggatgttgttgttgttaagtgatgttatggatgttaattcatggcttgggtatgcatgatt 12837434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 30232670 - 30232736
Alignment:
Q  23 ggatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||    
T  30232670 ggatgttgttgttgttaagtgatgttatggatgttaattcatggcttgggtatgcattattcataat 30232736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 290
Target Start/End: Original strand, 15213783 - 15213885
Alignment:
Q  192 tgaattcatgtctaaatgaagt-gttgttgaattagatatgtt---gttgttgaattataccataggtattccattttatgaagttgttgtttgtattgg 287  Q
    ||||||||| | |||||||||| ||||||||||||||||||||   |||||||| ||||||||||||||||||||||| ||||||||| ||||  |||||    
T  15213783 tgaattcatatttaaatgaagttgttgttgaattagatatgttgttgttgttgatttataccataggtattccattttgtgaagttgtagtttcaattgg 15213882  T
Q  288 tga 290  Q
    |||    
T  15213883 tga 15213885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 15272495 - 15272560
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| |||||    
T  15272495 gatgttgttgttgttaagtgatgttatgaatgctaattcatggcttgggtatgcatgattcataat 15272560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 286
Target Start/End: Original strand, 19622341 - 19622436
Alignment:
Q  192 tgaattcatgtctaaatgaagt-gttgttgaattagatatgttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattg 286  Q
    ||||||||||| |||| ||||| ||||||||| |||||||||||||||||| || ||||||  ||||| ||||||||||||||| |||||| ||||    
T  19622341 tgaattcatgtttaaacgaagttgttgttgaactagatatgttgttgttgatttgtaccatgtgtatttcattttatgaagttgatgtttgaattg 19622436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 290
Target Start/End: Original strand, 54363453 - 54363555
Alignment:
Q  192 tgaattcatgtctaaatgaagt-gttgttgaattagatatgttgttgttg---aattataccataggtattccattttatgaagttgttgtttgtattgg 287  Q
    ||||||||||| ||||| |||| || ||||||||||||||||||||||||   | || ||||||  |||||||||||| ||||||||| ||||| |||||    
T  54363453 tgaattcatgtttaaataaagttgtggttgaattagatatgttgttgttgctgatttgtaccatgagtattccattttgtgaagttgtagtttgaattgg 54363552  T
Q  288 tga 290  Q
    |||    
T  54363553 tga 54363555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 23270109 - 23270168
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||||||||| ||||| | |||| ||||||||||||||||| |||||||||    
T  23270109 gatgttgttgttgttaagtcatgttgttgatgataattcatggcttgggtttgcatgatt 23270168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 27961043 - 27960984
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||||||||| ||||| | |||| |||||||||| ||||||||||||||||    
T  27961043 gatgttgttgttgttaagtgatgttgttgatgataattcatggtttgggtatgcatgatt 27960984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 18494508 - 18494562
Alignment:
Q  29 tgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    |||||||||||||| ||||| | |||| ||| |||||||||||||||||||||||    
T  18494508 tgttgttgttaagtgatgttgttgatggtaactcatggcttgggtatgcatgatt 18494562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 820090 - 820146
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||||||| ||||| | |||| ||||||||||||||||| |||||||||    
T  820090 tgttgttgttgttaagtcatgttgttgatgataattcatggcttgggt-tgcatgatt 820146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 275
Target Start/End: Original strand, 17375454 - 17375540
Alignment:
Q  192 tgaattcatgtctaaatgaagt-gttgttgaattagatatgtt---gttgttgaattataccataggtattccattttatgaagttgt 275  Q
    ||||||||||| ||| |||||| ||||| ||||||||||||||   |||||||| || |||||| ||||||||||||| |||||||||    
T  17375454 tgaattcatgtttaactgaagttgttgt-gaattagatatgttgttgttgttgatttgtaccatgggtattccattttgtgaagttgt 17375540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 55376774 - 55376831
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||||| | ||||| | |||| ||||||||||||||||| |||||||||    
T  55376774 tgttgttgttgttaaattatgttgttgatgataattcatggcttgggtttgcatgatt 55376831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 13809685 - 13809744
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||| | ||||| | |||| ||||||||||||||| |||||||||||    
T  13809685 gatgttgttgttgctaattgatgttgttgatgataattcatggcttggatatgcatgatt 13809744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 16732241 - 16732182
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||| ||||||| ||||| ||||| | |||| ||||||||||||||||| |||||||||    
T  16732241 gatgtcgttgttgctaagtcatgttgttgatgataattcatggcttgggtttgcatgatt 16732182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 21959638 - 21959697
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||||| ||| ||||| | |||| ||||||||||||||||  |||||||||    
T  21959638 gatgttgttgttgtttagtcatgttgttgatgataattcatggcttgggcttgcatgatt 21959697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 15109524 - 15109573
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggt 73  Q
    ||||||||||||| ||||||||||| | |||| | |||||||||||||||    
T  15109524 gatgttgttgttgctaagtaatgttgttgatgatgattcatggcttgggt 15109573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 53704910 - 53704963
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcat 79  Q
    ||||||||||||| ||| ||||| | |||| ||||||||||||||||| |||||    
T  53704910 tgttgttgttgtttagtcatgttgttgatgataattcatggcttgggtttgcat 53704963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 4e-66; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 27330028 - 27330197
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27330028 gtgaaaataggtacttatgagttttgctcaaattgttggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaat 27330127  T
Q  224 tagata---tgttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||   |||||||||||||| ||| ||| |||||||||||||||||||| |||||||||||||||||    
T  27330128 tagatatgttgttgttgttgaatgatatcatgggtattccattttatgaagtagttgtttgtattggtga 27330197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 21859982 - 21859814
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||| |  |||||||||||| ||||| |||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  21859982 gtgaaaatgagtgcttatgagtttttctcaa-ttgttggattaggatattgtgttgttgatttatggttgaattcatgtctaaatgaagtgttgttgaat 21859884  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||||||||   ||||||| ||| ||||||||||||||||| |||| | || ||||| ||||||||    
T  21859883 tagatatgttgttgttgttgaatgatatcataggtattccattttgtgaaatggtggtttgaattggtga 21859814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 35054727 - 35054621
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||| ||||||||| |||| |||||||||||||||||||||| |||||||| |||||||||    
T  35054727 gtgaaaatgggtacttatgagttttactcaa-ttgttggattgagatattgtgctgttgaattatggttgaattcatgtctcaatgaagtattgttgaat 35054629  T
Q  224 tagatatg 231  Q
    ||||||||    
T  35054628 tagatatg 35054621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 27329929 - 27329995
Alignment:
Q  23 ggatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  27329929 ggatgttgttgttgttaagtgatgttatggatgttaattcatggcttgggtatgcatgattcataat 27329995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 35054829 - 35054763
Alignment:
Q  23 ggatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  35054829 ggatgttgttgttgttaagtgatgttatggatgctaattcatggcttgggtatgcatgattcataat 35054763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 51627839 - 51627898
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||| | | |||| |||||||||||||||||||||||||||    
T  51627839 gatgttgttgttgctaagtgatgatgttgatgataattcatggcttgggtatgcatgatt 51627898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 16656705 - 16656625
Alignment:
Q  213 tgttgttgaattagatatgttgt---tgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||| | |||||||||||||   |||||| || |||||| ||||||||||||| ||||||||| ||||| ||||||||    
T  16656705 tgttgttaagttagatatgttgtcgttgttgatttgtaccatgggtattccattttgtgaagttgtagtttgaattggtga 16656625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 21718300 - 21718241
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| || || ||||| | |||| ||||||||||||||||| |||||||||    
T  21718300 gatgttgttgttgatatgtcatgttgttgatgataattcatggcttgggtttgcatgatt 21718241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 22403287 - 22403334
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggt 73  Q
    ||||||||||||||||| ||||| | |||| |||||||||||||||||    
T  22403287 tgttgttgttgttaagtcatgttgttgatgataattcatggcttgggt 22403334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 35522494 - 35522553
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| || || ||||| | |||| ||||||||||||||||| |||||||||    
T  35522494 gatgttgttgttgatacgtcatgttgttgatgataattcatggcttgggtttgcatgatt 35522553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 49967722 - 49967663
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||||||||| ||||| | |||| |||||||| |||| ||| |||||||||    
T  49967722 gatgttgttgttgttaagtcatgttgttgatgataattcattgcttcggtttgcatgatt 49967663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 41212139 - 41212086
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcat 79  Q
    ||||||||||||| ||| ||||| | |||| ||||||||||||||||| |||||    
T  41212139 tgttgttgttgtttagtcatgttgttgatgataattcatggcttgggtttgcat 41212086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 18852900 - 18852954
Alignment:
Q  213 tgttgttgaattagatatgttgttgttg---aattataccataggtattccattt 264  Q
    |||||||||||| |||| ||||||||||   ||||||||||| ||||||||||||    
T  18852900 tgttgttgaattggatacgttgttgttgctgaattataccatgggtattccattt 18852954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 124; Significance: 9e-64; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 147527 - 147358
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||  |||||||||||||    
T  147527 gtgaaaatgggtacttatgagttttgcttaaattgttggattgggatattgtgttgttgaattatggttgaattcaagtctaaattgagtgttgttgaat 147428  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||||||||   ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  147427 tagatatgttgttgttgttgaattataccatgggtattccattttatgaagttgttgtttgaattggtga 147358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 5911 - 5743
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||    
T  5911 gtgaaaatgggtacttatgagttt-gctcaaattgttggattgagatattgtgttgttgaattatggttgatttcatgtcttaatgaagtgttgttgaat 5813  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||||||||   ||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  5812 tagatatgttgttgttgttgaattataccatgggtattcccttttatgaagttgttgtttgtattggtga 5743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 8604982 - 8604813
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| |||| |||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  8604982 gtgaaaatgggtacttgtgagttttgctcaaattgatggattgtgatattgtgttgttgaattatggttgaattcatgtctaaatgaagttttgttgaat 8604883  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||||||||   ||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  8604882 tagatatgttgttgttgttgaattataccatgggtattccattttgtgaagttgttgtttgaattggtga 8604813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 11061282 - 11061454
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||    
T  11061282 gtgaaaatgggtacttatgagttttgctcaaattgttggattgaaatattgtgttgttgaattatggttgaatttatgtctaaatgaagtgtttttgaat 11061381  T
Q  224 tagata------tgttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||      ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  11061382 tagatatgttgttgttgttgttgaattataccataggtattccattttatgaagttgttgtctgtattagtga 11061454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 136 - 290
Target Start/End: Original strand, 13326641 - 13326798
Alignment:
Q  136 acttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaattagata---tgt 232  Q
    ||||||||||||||||||||||| || |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |||    
T  13326641 acttatgagttttgctcaaattgatgaattgtgatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaattagatatgttgt 13326740  T
Q  233 tgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||| ||| ||||    
T  13326741 tgttgttgaattataccatgggtattccatttcatgaagttgttgtttgaatttgtga 13326798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 54038408 - 54038576
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  54038408 gtgaaaatggatacttatgagttttgctcaa-ttgttggattgggatattgtgttgttgaattatggttaaattcatgtctaaatgaagtgttgttgaat 54038506  T
Q  224 tagata---tgttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||   |||||||||||||| ||| ||| ||||||||||||| ||||||||| ||||||||||||||    
T  54038507 tagatatgttgttgttgttgaatgatatcatgggtattccattttgtgaagttgtggtttgtattggtga 54038576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 136 - 290
Target Start/End: Complemental strand, 3992508 - 3992353
Alignment:
Q  136 acttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaattagatatgtt-- 233  Q
    ||||||| ||||||||||| |   |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||      
T  3992508 acttatgtgttttgctcaatta--tggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaagtagatatgttgt 3992411  T
Q  234 -gttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3992410 ggttgttgaattataccatgggtattccattttatgaagttgttgtttgtattggtga 3992353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 17100623 - 17100454
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||| |||||||||||    
T  17100623 gtgaaaatggatacttatgagttttgctcaaattgttggattgggatattgtgtggttgaattatggttgaatttctgtctaaatgaaatgttgttgaat 17100524  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||| |||||||||   ||||||| ||||||| |||| ||||||||||||| | |||||||||||||||||    
T  17100523 taggtatgttgttgttgttgaatgataccatgggtaatccattttatgaaatggttgtttgtattggtga 17100454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 28558177 - 28558009
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||| | ||||||||||||||||||| ||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||     
T  28558177 gtgaaaatgagtacttatgagttttgctcaa-ttgttggattgagatattatgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaaa 28558079  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||||||||   |||||||||||||||  |||||||||||| ||||||||| ||||| ||||||||    
T  28558078 tagatatgttgttgttgttgaattataccatgtgtattccattttgtgaagttgtggtttgaattggtga 28558009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 45581602 - 45581434
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| |||||||| |||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  45581602 gtgaaaatgggtacttatgaattttgctcaa-ttgttggattgggatattgtgctgttgaattatggttgaattcatgtctaaatgaagtgttgttgaat 45581504  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||||||||   ||||||| ||| ||||||||||||||||| |||||| || |||||  |||||||    
T  45581503 tagatatgttgttgttgttgaatgatatcataggtattccattttgtgaagtggtggtttgatttggtga 45581434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 124 - 288
Target Start/End: Complemental strand, 54423984 - 54423817
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  54423984 gtgaaaatggctacttatgagttttgctcaaattgttcgattgtgatattgtgttgttgaattatggttgaattcatgtctaaatgaaatgttgttgaat 54423885  T
Q  224 tagatat---gttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggt 288  Q
    ||| |||   ||| ||||||||| ||||||| |||| ||||||||||||| | |||||||||||||||    
T  54423884 taggtatgtcgttattgttgaatgataccatgggtaatccattttatgaaatggttgtttgtattggt 54423817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 16261432 - 16261263
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  16261432 gtgaaaatggatacttatgtgttttgctcaa-ttgttggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaag 16261334  T
Q  224 tagatatgttgttg---ttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||||||||||||||   |||||| ||| |||| ||||||||||||||||| |  |||||||||||||||||    
T  16261333 tagatatgttgttgttcttgaatgatatcataagtattccattttatgaaataagttgtttgtattggtga 16261263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 19261112 - 19261228
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  19261112 gtgaaaatgggtacttatgagttttgctcaaattgttggattggaatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaaa 19261211  T
Q  224 tagatatgttgttgttg 240  Q
    |||||||||||||||||    
T  19261212 tagatatgttgttgttg 19261228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 124 - 240
Target Start/End: Complemental strand, 38167885 - 38167769
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  38167885 gtgaaaatgggtacttatgagttttgctcaaattgttggattggaatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaag 38167786  T
Q  224 tagatatgttgttgttg 240  Q
    |||||||||||||||||    
T  38167785 tagatatgttgttgttg 38167769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 124 - 281
Target Start/End: Original strand, 11882308 - 11882467
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| ||||| ||||||||| ||||||| || |||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  11882308 gtgaaaatgggtacttacgagttttgc-caaattgatgaattgagatattgcgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaat 11882406  T
Q  224 tagata---tgttgttgttgaattataccataggtattccattttatgaagttgttgtttg 281  Q
    ||||||   |||||||||||||||||||||| ||||| |||||| ||||||||||||||||    
T  11882407 tagatatgttgttgttgttgaattataccatgggtatcccatttcatgaagttgttgtttg 11882467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 53771011 - 53770842
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  | ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  53771011 gtgaaaatggataattatgtgttttgctcaa-ttgttggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaag 53770913  T
Q  224 tagatatgttgttg---ttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||||||||||||||   |||||| ||| |||  ||||||||||||||||| |  |||||||||||||||||    
T  53770912 tagatatgttgttgtccttgaatgatatcatgagtattccattttatgaaataagttgtttgtattggtga 53770842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 124 - 270
Target Start/End: Complemental strand, 2844161 - 2844013
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||     
T  2844161 gtgaaaatggatacttatgtgttttgctcaa-ttgttggattgggatattgtgttgttgaattatggttgaattcatgtctaattgaagtgttgttgaag 2844063  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaa 270  Q
    |||||||||||||   ||||||| ||| ||| | ||||||||||||||||    
T  2844062 tagatatgttgttgttgttgaatgatatcatggatattccattttatgaa 2844013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 23492344 - 23492175
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| ||||||||||||||||||||||  || ||||||| |||||||||||||||||||| |||||||| ||     
T  23492344 gtgaaaatggatacttatgtgttttgctcaa-ttgttggattgggatattgtgtaattgaattatgattgaattcatgtctaaatgaggtgttgttaaag 23492246  T
Q  224 tagatatgt---tgttgttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    |||||||||   ||||||||||| ||| ||| |||||||||||| |||||||  |||||||||||||||||    
T  23492245 tagatatgttgatgttgttgaatgataacatgggtattccatttcatgaagtaagttgtttgtattggtga 23492175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 38167986 - 38167921
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  38167986 gatgttgttgttgttaagtgatgttatggatgttaattcatggcttgggtatgcatgattcataat 38167921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 195
Target Start/End: Complemental strand, 17101308 - 17101237
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaa 195  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  17101308 gtgaaaatggatacttatgagttttgctcaaattgttggattgggatattgtgtggttgaattatggttgaa 17101237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 2844263 - 2844198
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  2844263 gatgttgttgttgttaagtgatgttatggatgctaattcatggcttgggtatgcatgattcataat 2844198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 3992622 - 3992557
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  3992622 gatgttgttgttgttaagtgatgttatggatgctaattcatggcttgggtatgcatgattcataat 3992557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 16261525 - 16261460
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  16261525 gatgttgttgttgttaagtgatgttatggatgctaattcatggcttgggtatgcatgattcataat 16261460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 17100725 - 17100660
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  17100725 gatgttattgttgttaagtgatgttatggatgttaattcatggcttgggtatgcatgattcataat 17100660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 17101410 - 17101345
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  17101410 gatgttattgttgttaagtgatgttatggatgttaattcatggcttgggtatgcatgattcataat 17101345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 23492445 - 23492386
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  23492445 gatgttgttgttgttaagtgatgttatggatgctaattcatggcttgggtatgcatgatt 23492386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 19261014 - 19261079
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| |||||    
T  19261014 gatgttgttgttgttaaatgatgttatgaatgttaattcatggcttgggtatgcatgattcataat 19261079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 53771113 - 53771048
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| |||||    
T  53771113 gatgttgttgttgttaagtgatgttatgaatgctaattcatggcttgggtatgcatgattcataat 53771048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 12560410 - 12560470
Alignment:
Q  23 ggatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    |||||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  12560410 ggatgttgttgttgctaagtgatgttgtggatgttaattcctggcttgggtatgcatgatt 12560470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 290
Target Start/End: Original strand, 40039089 - 40039191
Alignment:
Q  192 tgaattcatgtctaaatgaagt-gttgttgaattagatatgtt---gttgttgaattataccataggtattccattttatgaagttgttgtttgtattgg 287  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||   |||||||| || || |||  |||||||||||| ||||||||| ||||| |||||    
T  40039089 tgaattcatgtttaaataaagttgttgttgaattagatatgttgttgttgttgatttgtatcatgagtattccattttgtgaagttgtagtttgaattgg 40039188  T
Q  288 tga 290  Q
    |||    
T  40039189 tga 40039191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 11329136 - 11329195
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| | |||| |||||||||||||||||||||||||||    
T  11329136 gatgttgttgttgctaagtgatgttgttgatgataattcatggcttgggtatgcatgatt 11329195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 17139580 - 17139521
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| | |||| |||||||||||||||||||||||||||    
T  17139580 gatgttgttgttgctaagtgatgttgttgatgataattcatggcttgggtatgcatgatt 17139521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 14528187 - 14528246
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| | |||| |||||||||||||||||||| ||||||    
T  14528187 gatgttgttgttgctaagtgatgttgttgatggtaattcatggcttgggtatgaatgatt 14528246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 290
Target Start/End: Complemental strand, 15517736 - 15517619
Alignment:
Q  175 tgttgttaaattatggttgaattcatgtctaaatgaagtgtt-gttgaattagatatgttgttgttg--aattataccataggtattccattttatgaag 271  Q
    ||||||| | |||||||||||||||||| ||| |||||| || |||||||| |||||||||||||||   ||| | |||| | ||||||||||| || ||    
T  15517736 tgttgttgatttatggttgaattcatgtttaa-tgaagtttttgttgaattggatatgttgttgttgttgattgttccatggatattccattttgtggag 15517638  T
Q  272 ttgttgtttgtattggtga 290  Q
    || ||||||| ||||||||    
T  15517637 ttattgtttggattggtga 15517619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 12349907 - 12349963
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||||||| ||||| | |||| ||||||||||||||||| |||||||||    
T  12349907 tgttgttgttgttaagtcatgttgttgatgataattcatggcttgggt-tgcatgatt 12349963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 30207261 - 30207204
Alignment:
Q  233 tgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||||| || |||||| ||||||||||||| ||||||||| ||||| ||||||||    
T  30207261 tgttgttgatttgtaccatgggtattccattttgtgaagttgtggtttgaattggtga 30207204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 6154508 - 6154570
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||| ||||||||| ||||| | |||| ||||||||||||||||| ||||||||| |||||    
T  6154508 tgttgttattgttaagtcatgttgttgatgataattcatggcttgggt-tgcatgattcataat 6154570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 14295510 - 14295451
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||  ||||| ||||| | |||| ||||||||||||||||| |||||||||    
T  14295510 gatgttgttgtttctaagtgatgttgttgatgataattcatggcttgggtttgcatgatt 14295451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 16880195 - 16880140
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcat 79  Q
    |||||| |||||| ||||| ||||| |||||| ||||||||||||||||| |||||    
T  16880195 gatgttattgttgctaagtgatgttgtggatgataattcatggcttgggtgtgcat 16880140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 17523064 - 17523127
Alignment:
Q  24 gatgttgttgttgttaagt-aatgttatggatgttaattcatggcttgggtatgcatgatttat 86  Q
    ||||||||||||| ||||| ||| || | |||| ||||||||||||||||| ||||||||||||    
T  17523064 gatgttgttgttgctaagtcaattttgttgatgataattcatggcttgggtttgcatgatttat 17523127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 45581701 - 45581638
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||| ||| || |  | |||| ||||||||||||||||||||||||||| |||||    
T  45581701 tgttgttgttgtttagtcatatggttgatgataattcatggcttgggtatgcatgattcataat 45581638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 50112226 - 50112285
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||||| ||| ||||| | |||| |||||||||||||| || |||||||||    
T  50112226 gatgttgttgttgtttagtcatgttgttgatgataattcatggcttgagtttgcatgatt 50112285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 54038309 - 54038372
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||| ||| || |  | |||| ||||||||||||||||||||||||||| |||||    
T  54038309 tgttgttgttgtttagtcatatagttgatgataattcatggcttgggtatgcatgattcataat 54038372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 54424084 - 54424025
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||| ||| ||||| | ||| |||||| | |||||||||||||||||||||||||    
T  54424084 gatgttgttattgctaagtgacgttgtggatgattattcatggcttgggtatgcatgatt 54424025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 12488901 - 12488950
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggt 73  Q
    ||||||||||||| ||||| ||||| | |||| |||||||||||||||||    
T  12488901 gatgttgttgttgctaagtgatgttgttgatgataattcatggcttgggt 12488950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 13817585 - 13817532
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcat 79  Q
    ||||||||||||| ||| ||||| | |||| ||||||||||||||||| |||||    
T  13817585 tgttgttgttgtttagtcatgttgttgatgataattcatggcttgggtttgcat 13817532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 22144449 - 22144506
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||||||  ||||| | |||| |||| |||||||||||| |||||||||    
T  22144449 tgttgttgttgttaagccatgttgttgatgataatacatggcttgggtttgcatgatt 22144506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 28558250 - 28558213
Alignment:
Q  52 gatgttaattcatggcttgggtatgcatgatttataat 89  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  28558250 gatgataattcatggcttgggtatgcatgattcataat 28558213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 116; Significance: 5e-59; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 4534 - 4370
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||      ||||||||||||||    
T  4534 gtgaaaattggtacttatgagttttgctcaaattgttggattgggatattgtgttgttgaattatggttgaattcatgtc-----aaagtgttgttgaat 4440  T
Q  224 tagata---tgttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||   |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4439 tagatatgttgttgttgttgaattataccatgggtattccattttatgaagttgttgtttgtattggtga 4370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 9148 - 8984
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||      ||||||||||||||    
T  9148 gtgaaaattggtacttatgagttttgctcaaattgttggattgggatattgtgttgttgaattatggttgaattcatgtc-----aaagtgttgttgaat 9054  T
Q  224 tagata---tgttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||   |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9053 tagatatgttgttgttgttgaattataccatgggtattccattttatgaagttgttgtttgtattggtga 8984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 7142 - 6978
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||      ||||||||||||||    
T  7142 gtgaaaattggtacttatgagttttgctcaaattgttggattgggatattgtgttgttgaattatggttgaattcatgtc-----aaagtgttgttgaat 7048  T
Q  224 tagata---tgttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||   |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7047 tagatatgttgttgttgttgaattataccatgggtattccattttatgaagttgttgtttgtattggtga 6978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 108; Significance: 3e-54; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 79832 - 79664
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  79832 gtgaaaatgggtacttatgagttttgctcac-ttgttggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtattgttgaat 79734  T
Q  224 tagatatg---ttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||||   |||||||||||| ||| ||||||||||||||||| |||||| || ||||| ||||||||    
T  79733 tagatatgttattgttgttgaatgatatcataggtattccattttgtgaagtggtggtttgaattggtga 79664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 46136 - 45966
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagt-gttgttgaa 222  Q
    ||||||||||| |||||||||||||||||||||||||||||||  ||| ||||||||| ||||||||||||||||||||  || ||| || |||||||||    
T  46136 gtgaaaatgggtacttatgagttttgctcaaattgttggattgaaatactgtgttgttgaattatggttgaattcatgttcaattgaggttgttgttgaa 46037  T
Q  223 ttagatatgttgttgttgaa---ttataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||||||||||||||     || | |||| ||||||||||||| ||||||||| ||||| ||||||||    
T  46036 ttagatatgttgttgttgttgttttgttccatgggtattccattttgtgaagttgtggtttgaattggtga 45966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 40612 - 40552
Alignment:
Q  142 gagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgt 202  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||||| |||||||||    
T  40612 gagttttgctcaaattgttggattggaatactgtgttgttgaattatggttcaattcatgt 40552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 79934 - 79871
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||| ||| || |  | |||| ||||||||||||||||||||||||||| |||||    
T  79934 tgttgttgttgtttagtcatatggttgatgataattcatggcttgggtatgcatgattcataat 79871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 104; Significance: 7e-52; HSPs: 3)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 19185 - 19353
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    |||||||| || ||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  19185 gtgaaaataggtacttatgagttttgctcaa-ttgttgaattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtattgttgaat 19283  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||||||||   ||||||| ||| ||||||||||||||||| |||||| || ||||| ||||||||    
T  19284 tagatatgttgttgtcgttgaatgatatcataggtattccattttgtgaagtggtagtttgaattggtga 19353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 12705 - 12768
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||| ||| || |  | |||| ||||||||||||||||||||||||||| |||||    
T  12705 tgttgttgttgtttagtcatatggttgatgataattcatggcttgggtatgcatgattcataat 12768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 19086 - 19149
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||| ||| || |  | |||| ||||||||||||||||||||||||||| |||||    
T  19086 tgttgttgttgtttagtcatatggttgatgataattcatggcttgggtatgcatgattcataat 19149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 101; Significance: 5e-50; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 124 - 240
Target Start/End: Complemental strand, 146572 - 146456
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  146572 gtgaaaatgggtacttatgagttttgctcaaattgttggattggaatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaag 146473  T
Q  224 tagatatgttgttgttg 240  Q
    |||||||||||||||||    
T  146472 tagatatgttgttgttg 146456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 146673 - 146608
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||    
T  146673 gatgttgttgttgttaagtgatgttatgcatgttaattcatggcttgggtatgcatgattcataat 146608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 5e-50; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 20481576 - 20481406
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| |||||||||||||||||||||||||||||||  |||||||||| || ||||||||||||||||||||||||||||||||||||||||     
T  20481576 gtgaaaatgggtacttatgagttttgctcaaattgttggattgttatattgtgttttttaattatggttgaattcatgtctaaatgaagtgttgttgaag 20481477  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    |||||||||||||   ||||||| ||| ||| || ||||||||||||||| |  |||||||||||||||||    
T  20481476 tagatatgttgttgttgttgaatgatatcatgggcattccattttatgaaataagttgtttgtattggtga 20481406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 274414 - 274245
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  274414 gtgaaaatggatacttatgtgttttgctcaa-ttgttggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaag 274316  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    |||||||||||||   ||||||| ||| |||  ||||||||||||||||| |  |||||||||||||||||    
T  274315 tagatatgttgttgttgttgaatgatatcatgtgtattccattttatgaaataagttgtttgtattggtga 274245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 641435 - 641604
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  641435 gtgaaaatggatacttatgtgttttgctcaa-ttgttggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaag 641533  T
Q  224 tagata---tgttgttgttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||||||   |||||||||||||| ||| |||  ||||||||||||||||| |  |||||||||||||||||    
T  641534 tagatatgttgttgttgttgaatgatatcatgtgtattccattttatgaaataagttgtttgtattggtga 641604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 827241 - 827410
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  827241 gtgaaaatggatacttatgtgttttgctcaa-ttgttggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaag 827339  T
Q  224 tagata---tgttgttgttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||||||   |||||||||||||| ||| |||  ||||||||||||||||| |  |||||||||||||||||    
T  827340 tagatatgttgttgttgttgaatgatatcatgtgtattccattttatgaaataagttgtttgtattggtga 827410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 124 - 286
Target Start/End: Complemental strand, 39115247 - 39115083
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||| | | ||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  39115247 gtgaaaatgagtatttatgagttttgctcaa-ttgttggattggaatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttcttgaat 39115149  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagttgttgtttgtattg 286  Q
    |||||||||||||   ||||||| ||| ||| ||||||||||||| ||||||||| ||||| ||||    
T  39115148 tagatatgttgttgttgttgaatgatatcatgggtattccattttgtgaagttgtggtttgaattg 39115083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 24386028 - 24386197
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||  ||||||     
T  24386028 gtgaaaatggatacttatgtgttttgctcaa-ttgttggattggaatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgcggttgaag 24386126  T
Q  224 tagata---tgttgttgttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||||||   |||||||||||||| ||| |||| ||||||||||||||||| |  |||||||||||||||||    
T  24386127 tagatatgttgttgttgttgaatgatatcataagtattccattttatgaaataagttgtttgtattggtga 24386197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 16039165 - 16039334
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| ||||||| ||||||||||| |||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||    
T  16039165 gtgaaaatgggtacttatgtgttttgctcaa-ttgttggattaggatattgtgttgttgaatgatggttgaattcatgtctaaatgaagtattgttgaat 16039263  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    |||||||||||||   ||||||  ||| ||| ||||| |||||||||||| |  ||||||||| |||||||    
T  16039264 tagatatgttgttgtggttgaaaaatatcatgggtatcccattttatgaaataagttgtttgtgttggtga 16039334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 20481677 - 20481612
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||| |||||    
T  20481677 gatgttgttgttgttaagtcatgttgttgatgttaattcatggcttgggtatgcatgattcataat 20481612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 24385926 - 24385991
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||| |||||    
T  24385926 gatgttgttgttgttaagtgattttatggatgctaattcatggcttgggtatgcatgattcataat 24385991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 286
Target Start/End: Complemental strand, 17502252 - 17502154
Alignment:
Q  192 tgaattcatgtctaaatgaagt-gttgttgaattagatatgttgttgttg---aattataccataggtattccattttatgaagttgttgtttgtattg 286  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||   | || |||||| ||||||||||||| ||||||||| ||||| ||||    
T  17502252 tgaattcatgtttaaatgaagttgttgttgaattagatatgttgttgttgttgatttgtaccatgggtattccattttgtgaagttgtagtttgaattg 17502154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 274515 - 274458
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatga 81  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  274515 gatgttgttattgttaagtgatgttatggatgctaattcatggcttgggtatgcatga 274458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 641334 - 641391
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatga 81  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  641334 gatgttgttattgttaagtgatgttatggatgctaattcatggcttgggtatgcatga 641391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 827140 - 827197
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatga 81  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  827140 gatgttgttattgttaagtgatgttatggatgctaattcatggcttgggtatgcatga 827197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 16039064 - 16039129
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||||| ||||||||||| |||||    
T  16039064 gatgttgttgttgttaagtgatgttatggatgctaatttatggcttggatatgcatgattcataat 16039129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 41246730 - 41246671
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||||||||| ||||| | |||| ||||||||||||||||| |||||||||    
T  41246730 gatgttgttgttgttaagtcatgttgttgatgataattcatggcttgggtttgcatgatt 41246671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 4233924 - 4233864
Alignment:
Q  230 tgttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||||||| || |||||| ||||||||||||| ||||||||| ||||| ||||||||    
T  4233924 tgttgttgttgatttgtaccatgggtattccattttgtgaagttgtagtttgaattggtga 4233864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 273
Target Start/End: Complemental strand, 24239703 - 24239618
Alignment:
Q  192 tgaattcatgtctaaatgaagt-gttgttgaattagatatgttgttgt---tgaattataccataggtattccattttatgaagtt 273  Q
    ||||||||||| |||||||||| |||| ||||||||||||||||||||   ||| || |||||| |||||| |||||| |||||||    
T  24239703 tgaattcatgtttaaatgaagttgttgctgaattagatatgttgttgttactgatttgtaccatgggtatttcattttgtgaagtt 24239618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 39446941 - 39447000
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| | |||  |||||||||||||||||||||||||||    
T  39446941 gatgttgttgttgctaagtgatgttgttgataataattcatggcttgggtatgcatgatt 39447000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 290
Target Start/End: Original strand, 18118464 - 18118523
Alignment:
Q  231 gttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||||||||||| |  |||||| ||||||||||||| ||||||||||||||| ||| ||||    
T  18118464 gttgttgttgattggtaccattggtattccattttgtgaagttgttgtttgaatttgtga 18118523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 20567333 - 20567392
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| || || ||||| | |||| ||||||||||||||||| |||||||||    
T  20567333 gatgttgttgttgatatgtcatgttgttgatgataattcatggcttgggtttgcatgatt 20567392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 20573367 - 20573426
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| || || ||||| | |||| ||||||||||||||||| |||||||||    
T  20573367 gatgttgttgttgatatgtcatgttgttgatgataattcatggcttgggtttgcatgatt 20573426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 20573526 - 20573585
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| || || ||||| | |||| ||||||||||||||||| |||||||||    
T  20573526 gatgttgttgttgatatgtcatgttgttgatgataattcatggcttgggtttgcatgatt 20573585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 25122608 - 25122550
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||||| ||| ||||| | |||| ||||||||||||||||| |||||||||    
T  25122608 gatgttgttgttgtttagtcatgttgttgatgataattcatggcttgggt-tgcatgatt 25122550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 41506994 - 41507051
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||| || || | |||| ||||||||||||||||| |||||||||    
T  41506994 tgttgttgttgtttagtcatattgttgatgataattcatggcttgggtttgcatgatt 41507051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 5e-50; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 25651208 - 25651038
Alignment:
Q  124 gtgaaaatgggcactta-tgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaa 222  Q
    ||||||||||| ||||  |||||||||||||||||| || |||| ||| | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25651208 gtgaaaatgggtactttgtgagttttgctcaaattgatgaattgtgatgtcgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaa 25651109  T
Q  223 ttagatatgttgtt---gttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    ||| ||||||||||   ||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  25651108 ttaaatatgttgttgttgttgaattataccatgggtattccattttgtgaagttgttgtttgaattggtga 25651038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 18570251 - 18570082
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||| | ||||||||||||||||||| ||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  18570251 gtgaaaatgagtacttatgagttttgctcaa-ttgttggattgagatattgtgttgttgaattatagttgaattcatgtctaaatgaagtgttgttgaat 18570153  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    |||||||||||||   ||||||  ||| ||| |||||||||||||||||| |  |||||||||||||||||    
T  18570152 tagatatgttgttgttgttgaacgatatcatgggtattccattttatgaaataagttgtttgtattggtga 18570082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 23994893 - 23994724
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  | ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  23994893 gtgaaaatggataattatgtgttttgctcaa-ttgttggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaag 23994795  T
Q  224 tagatatgttgttg---ttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||||||||||||||   |||||| ||| |||  ||||||||||||||||| |  |||||||||||||||||    
T  23994794 tagatatgttgttgtccttgaatgatatcatgagtattccattttatgaaataagttgtttgtattggtga 23994724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 136 - 290
Target Start/End: Complemental strand, 26089695 - 26089538
Alignment:
Q  136 acttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaattagatatgttgt 235  Q
    ||||||| ||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26089695 acttatgtgttttgctcaa-ttgttggattgagatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaagtagatatgttgt 26089597  T
Q  236 tg---ttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||   |||||| ||| |||  ||||||||||||||||| |  |||||||||||||||||    
T  26089596 tgttattgaatgatatcatgagtattccattttatgaaataagttgtttgtattggtga 26089538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 136 - 290
Target Start/End: Original strand, 18002791 - 18002948
Alignment:
Q  136 acttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaattagatatgttgt 235  Q
    ||||||| ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  18002791 acttatgtgttttgctcaa-ttattggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaattgttgttgaagtagatatgttgt 18002889  T
Q  236 tg---ttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||   ||||||  || ||| ||||||||||||||| || |  |||||||||||||||||    
T  18002890 tgttattgaatgttatcatgggtattccattttataaaataagttgtttgtattggtga 18002948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 124 - 222
Target Start/End: Original strand, 15742507 - 15742604
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaa 222  Q
    ||||||||||  | ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15742507 gtgaaaatggataattatgtgttttgctcaa-ttgttggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaa 15742604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 290
Target Start/End: Complemental strand, 19175256 - 19175137
Alignment:
Q  175 tgttgttaaattatggttgaattcatgtctaaatgaagt-gttgttgaattagatatgttgttgttg---aattataccataggtattccattttatgaa 270  Q
    ||||||| | || ||||||||||||||| |||||||||| ||||||||||| |||||||||||||||   | || |||||| ||||||||||||| ||||    
T  19175256 tgttgttgatttgtggttgaattcatgtttaaatgaagttgttgttgaattggatatgttgttgttgttgatttgtaccatgggtattccattttctgaa 19175157  T
Q  271 gttgttgtttgtattggtga 290  Q
    ||||||||||| ||||||||    
T  19175156 gttgttgtttgaattggtga 19175137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 18777217 - 18777153
Alignment:
Q  25 atgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  18777217 atgttgttgttgttaagtgatgttatggatgctaattcatggcttgggtatgcatgattcataat 18777153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 18777105 - 18776980
Alignment:
Q  136 acttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaattagatatgttgt 235  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||| ||||||||||||    
T  18777105 acttatgagttttgttcaa-ttgttggattgggatattgtgttgtt-----------gaattcaagtctaaatgaagtgttgttgaagtagatatgttgt 18777018  T
Q  236 t---gttgaattataccataggtattccattttatgaa 270  Q
    |   ||||||| |||  || ||||||||||||||||||    
T  18777017 tgttgttgaatgatattatgggtattccattttatgaa 18776980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 23994995 - 23994930
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| |||||    
T  23994995 gatgttgttgttgttaagtgatgttatgaatgctaattcatggcttgggtatgcatgattcataat 23994930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 26089807 - 26089742
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||| |||||    
T  26089807 gatgttgttgttgttaagtgatgttatggatgctaattcatggtttgggtatgcatgattcataat 26089742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 290
Target Start/End: Complemental strand, 19168936 - 19168834
Alignment:
Q  192 tgaattcatgtctaaatgaagt-gttgttgaattagatatgttgttgttg---aattataccataggtattccattttatgaagttgttgtttgtattgg 287  Q
    ||||||||||| |||| ||| | |||||||||||||||||||||||||||   | || |||||| ||||||||||||| ||||||||| |||||||||||    
T  19168936 tgaattcatgtttaaaagaaattgttgttgaattagatatgttgttgttgctgatttgtaccatgggtattccattttgtgaagttgtagtttgtattgg 19168837  T
Q  288 tga 290  Q
    |||    
T  19168836 tga 19168834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 15742408 - 15742471
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| |||||    
T  15742408 tgttgttgttgttaagtgatgttatgaatgctaattcatggcttgggtatgcatgattcataat 15742471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 18002679 - 18002738
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||    
T  18002679 gatgttgttgttgttaagtgacgttatggatgctaattcatggcttgggtatgcatgatt 18002738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 18570345 - 18570286
Alignment:
Q  30 gttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||| |||||    
T  18570345 gttgttgttaagtgatgttatggatgctaattcatggcctgggtatgcatgattcataat 18570286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 21931309 - 21931205
Alignment:
Q  175 tgttgttaaattatggttgaattcatgtctaaatgaagt-gttgttgaattagatatgttgttg--ttgaattataccataggtattccattttatgaag 271  Q
    ||||||| | || |||||||||||||||  ||||||||| ||||||||||||||||||||||||  |||| |||||| || ||||||| ||||| ||| |    
T  21931309 tgttgttgatttgtggttgaattcatgttcaaatgaagttgttgttgaattagatatgttgttgttttgatttatacaatgggtattctattttgtgagg 21931210  T
Q  272 ttgtt 276  Q
    |||||    
T  21931209 ttgtt 21931205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 16136349 - 16136269
Alignment:
Q  213 tgttgttgaattagatatgttgttgttg---aattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||||||| |||||||||||||||   | || |||||| |||||| |||||| ||||||||||||||| ||||||||    
T  16136349 tgttgttgaattggatatgttgttgttgttgatttgtaccatgggtatttcattttgtgaagttgttgtttgaattggtga 16136269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 290
Target Start/End: Original strand, 31467739 - 31467857
Alignment:
Q  175 tgttgttaaattatggttgaattcatgtctaaatgaagt-gttgttgaattagatatgttgttg---ttgaattataccataggtattccattttatgaa 270  Q
    ||||||| | |||||||||||||||||| ||| |||||| ||| ||||||| ||||||||||||   |||| || | |||| ||||||||||||| || |    
T  31467739 tgttgttgatttatggttgaattcatgtttaa-tgaagttgttattgaatttgatatgttgttgctgttgatttgttccatgggtattccattttgtgga 31467837  T
Q  271 gttgttgtttgtattggtga 290  Q
    ||| ||||||| ||||||||    
T  31467838 gttattgtttggattggtga 31467857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 22441004 - 22440948
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||||||| ||||| | |||| ||||||||||||||||| |||||||||    
T  22441004 tgttgttgttgttaagtcatgttgttgatgataattcatggcttgggt-tgcatgatt 22440948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 18399010 - 18398955
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcat 79  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||||||||||| |||||    
T  18399010 gatgttgttgttgctaagtgatgttgttgatgataattcatggcttgggtgtgcat 18398955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 31628340 - 31628281
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| || || ||||| | |||| ||||||||||||||||| |||||||||    
T  31628340 gatgttgttgttgatatgtcatgttgttgatgataattcatggcttgggtttgcatgatt 31628281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 25744390 - 25744443
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcat 79  Q
    ||||||||||||| ||| ||||| | |||| ||||||||||||||||| |||||    
T  25744390 tgttgttgttgtttagtcatgttgttgatgataattcatggcttgggtttgcat 25744443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 32898859 - 32898803
Alignment:
Q  27 gttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    |||||||||||| ||| ||||| | |||| ||||| ||||||||||| |||||||||    
T  32898859 gttgttgttgtttagtcatgttgttgatgataattaatggcttgggtttgcatgatt 32898803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 124 - 286
Target Start/End: Original strand, 15750 - 15914
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  15750 gtgaaaatgggtacttatgagttttgctcaa-ttgttggattgggatattgagttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaat 15848  T
Q  224 tagatatgttg---ttgttgaattataccataggtattccattttatgaagttgttgtttgtattg 286  Q
    |||||||||||   |||||||||  || ||| ||||||||||||| |||||| || ||||| ||||    
T  15849 tagatatgttgttattgttgaatggtatcatgggtattccattttgtgaagtggtggtttgaattg 15914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 15651 - 15714
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||| ||| ||||||| |||| ||||||||||||||||||||||||||| |||||    
T  15651 tgttgttgttgtttagtcatgttatagatgctaattcatggcttgggtatgcatgattcataat 15714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 100; Significance: 2e-49; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 124 - 289
Target Start/End: Original strand, 193772 - 193940
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  193772 gtgaaaatggatacttatgtgttttgctcaa-ttgttggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaag 193870  T
Q  224 tagata---tgttgttgttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtg 289  Q
    ||||||   |||||||||||||| ||| |||| ||||||||||||||||| |  ||||||||||||||||    
T  193871 tagatatcttgttgttgttgaatgatatcataagtattccattttatgaaataagttgtttgtattggtg 193940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 124 - 289
Target Start/End: Original strand, 186813 - 186981
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  186813 gtgaaaatggatacttatgtgttttgctcaa-ttgttggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaag 186911  T
Q  224 tagata---tgttgttgttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtg 289  Q
    ||||||   ||||||| |||||| ||| |||| ||||||||||||||||| |  ||||||||||||||||    
T  186912 tagatatattgttgttattgaatgatatcataagtattccattttatgaaataagttgtttgtattggtg 186981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 186708 - 186773
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  186708 gatgttgttgttgttaagtgatgttatggatgctaattcatggcttgggtatgcatgattcataat 186773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 193670 - 193735
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  193670 gatgttgttgttgttaagtgatgttatggatgctaattcatggcttgggtatgcatgattcataat 193735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 6822 - 6991
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||     
T  6822 gtgaaaatggatacttatgtgttttgctcaa-ttgttggattgggatattgtattgttaaattatgattgaattcatgtctaaatgaagtgttgttgaag 6920  T
Q  224 tagatatgttgttg---ttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||||||||||||||   |||||| ||| |||| ||||||||||||||||| |  |||||||||||||||||    
T  6921 tagatatgttgttgttcttgaatgataacataagtattccattttatgaaataagttgtttgtattggtga 6991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 6730 - 6791
Alignment:
Q  28 ttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  6730 ttgttgttgttaagtgatgttatggatgctaattcatggcttgggtatgcatgattcataat 6791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 97; Significance: 1e-47; HSPs: 4)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 13671 - 13840
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  13671 gtgaaaatggatacttatgtgttttgctcaa-ttgttggattgggatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttgaag 13769  T
Q  224 tagatatgttgttg---ttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||||||||||||||   |||||| ||| |||  ||||||||||||||||| |  |||||||||||||||||    
T  13770 tagatatgttgttgttcttgaatgatatcatgagtattccattttatgaaataagttgtttgtattggtga 13840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 144 - 290
Target Start/End: Original strand, 21665 - 21814
Alignment:
Q  144 gttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaattagata---tgttgttgttg 240  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||| ||||||   |||||||||||    
T  21665 gttttgctcaa-ttgttggattgggatattgtgttgttgaattatggttgaattcatgtctacatgaaatgttgttgaagtagatatgttgttgttgttg 21763  T
Q  241 aattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||| ||| |||  ||||||||||||||||| |  |||||||||||||||||    
T  21764 aatgatatcatgagtattccattttatgaaataagttgtttgtattggtga 21814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 13569 - 13634
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  13569 gatgttgttgttgttaagtgatgttatggatgctaattcatggcttgggtatgcatgattcataat 13634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 21543 - 21608
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| |||||    
T  21543 gatgttgttgttgttaagtgatgttatgaatgctaattcatggcttgggtatgcatgattcataat 21608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 22788 - 22957
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||     
T  22788 gtgaaaatggatacttatgtgttttgctcaa-ttgttggattgtgatattgtgttgttgaattatgattgaattcatgtctaaatgaagtgttgttgaag 22886  T
Q  224 tagata---tgttgttgttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||||||   |||||||||||||| ||| ||| |||||||||||||||||| |  |||||||||||||||||    
T  22887 tagatatgttgttgttgttgaatgataacatgggtattccattttatgaaataagttgtttgtattggtga 22957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 22701 - 22752
Alignment:
Q  38 taagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||| |||||||||||| |||||||||| |||||||||||||||| |||||    
T  22701 taagtgatgttatggatgctaattcatggtttgggtatgcatgattcataat 22752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 1263 - 1432
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| |||||||||||| ||||||||  ||| ||||||||||||||||||||||||||||||||||||||||     
T  1263 gtgaaaatggatacttatgtgttttgctcaa-ttgttggattggaatattgtgaagttgaattatggttgaattcatgtctaaatgaagtgttgttgaag 1361  T
Q  224 tagatatgttgttg---ttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||||||||||||||   |||||| ||| |||| ||||||||||||||||| |  |||||||||||||||||    
T  1362 tagatatgttgttgttattgaatgatatcataagtattccattttatgaaataagttgtttgtattggtga 1432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 1161 - 1226
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| |||||    
T  1161 gatgttgttgttgttaagtgatgttatgaatgctaattcatggcttgggtatgcatgattcataat 1226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 33636 - 33466
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaag-tgttgttgaa 222  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||  || ||||| ||||||| ||    
T  33636 gtgaaaatgggtacttatgaattttgctcaaattgttggattgagatattgtgttgttgaattatggttgaattcatgttcaattgaagttgttgttaaa 33537  T
Q  223 ttagata---tgttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||   |||||||||||| || ||| || ||||||||||||| ||||||||| ||||| ||||||||    
T  33536 ttagatatgttgttgttgttgatttgtacaatgggtattccattttgtgaagttgtggtttgaattggtga 33466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 55551 - 55382
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||     
T  55551 gtgaaaatggatacttatgtgttttgctcaa-ttgttggattgggatattgtgttgttgaattatggttcaattcatgtctaagtgaagtgttgttgaag 55453  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    |||||||||||||   ||||||| ||| ||| ||||||||||||||| ||||  |||||||||||| ||||    
T  55452 tagatatgttgttgttgttgaatgatatcatgggtattccattttataaagtaagttgtttgtattcgtga 55382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 55653 - 55588
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  55653 gatgttgttgttgttaagtgatgttatggatgctaattcatggcttgggtatgcatgattcataat 55588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 9791 - 9960
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||| |||||||||    
T  9791 gtgaaaatggatacttatgtgttttgctcaa-ttgttggattgggatattgtgttgtcgaatgatggttgaattcatgtctaaatgaagtattgttgaat 9889  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    |||||||||||||   ||||||| ||| ||| ||||| |||||||||||| |  ||||||||| |||||||    
T  9890 tagatatgttgttgtggttgaatgatatcatgggtatcccattttatgaaataagttgtttgtgttggtga 9960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 9690 - 9755
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||| |||||    
T  9690 gatgttgttgttgttaagtgacgttatggatgctaattcatggcttgggtatgcatgattcataat 9755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 85; Significance: 2e-40; HSPs: 4)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 94946 - 94777
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| ||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||| |     
T  94946 gtgaaaatggatacttatgtgttttgctcaa-ttgttggattgtgatattgtgttgttgaattatgattgaattcatgtctaaatgaagtgttgttggag 94848  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    |||||||||||||   ||||||| ||| ||| | |||||||||||||||| |  |||||||||||||||||    
T  94847 tagatatgttgttgttgttgaatgataacatggttattccattttatgaaataagttgtttgtattggtga 94777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 154 - 290
Target Start/End: Original strand, 25029 - 25169
Alignment:
Q  154 aattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaattagata---tgttgttgttgaattatacca 250  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||   |||||||||||||| ||| ||    
T  25029 aattgttgaattgggatattgtgttgttgaattatggttgaattcatgtttaaatgaagtgttgttgaattggatatgctgttgttgttgaatgatatca 25128  T
Q  251 taggtattccattttatgaagtt-gttgtttgtattggtga 290  Q
    | | |||||||||||||||| || |||||||||||||||||    
T  25129 tggttattccattttatgaaattagttgtttgtattggtga 25169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 24903 - 24968
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||| |||||    
T  24903 gatgttgttgttgttaagtgatgttatggatgttaattcttggcttgggtattcatgattcataat 24968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 95047 - 94982
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||| ||||| |||||||||||| |||||||||| |||||||||||||||| |||||    
T  95047 gatgttgttgttgataagtgatgttatggatgctaattcatggtttgggtatgcatgattcataat 94982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 85; Significance: 2e-40; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 88267 - 88098
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||| | |||||||||||||| |||| ||||| ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  88267 gtgaaaatgagtacttatgagttttggtcaa-ttgtttgattgggatattgtgttgttgcattatggttgaattcatgtttaaatgaagtgttgttgaat 88169  T
Q  224 tagatatgttgtt---gttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
     ||||||||||||   ||||||| ||| ||| | |||||||||||||||| |  |||||||||||||||||    
T  88168 aagatatgttgttgttgttgaatgatatcatggttattccattttatgaaataagttgtttgtattggtga 88098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 88347 - 88289
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgat 82  Q
    ||||||| ||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  88347 gatgttgctgttgttaagtgatgttatggatgctaattcttggcttgggtatgcatgat 88289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 132425 - 132484
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||||||||| ||||| | |||| ||||||||||||||||| |||||||||    
T  132425 gatgttgttgttgttaagtcatgttgttgatgataattcatggcttgggtttgcatgatt 132484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 11759 - 11700
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| | ||| | |||| ||||||||||||||| |||||||||||    
T  11759 gatgttgttgttgctaagtgacgttgttgatgataattcatggcttggttatgcatgatt 11700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 11063 - 10970
Alignment:
Q  127 aaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttg 220  Q
    |||||||| |||| |||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11063 aaaatgggtacttgtgagttttgctcaaattgatggattgtgatattgtgttgttgaattatggttgaattcatgtctaaatgaagtgttgttg 10970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 10974 - 10914
Alignment:
Q  230 tgttgttgttgaattataccataggtattccattttatgaagttgttgtttgtattggtga 290  Q
    |||||||||||||||||| ||| | ||||||||||| ||||||||| ||||| ||||||||    
T  10974 tgttgttgttgaattatagcatggatattccattttgtgaagttgtagtttgaattggtga 10914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 144 - 290
Target Start/End: Original strand, 17708 - 17857
Alignment:
Q  144 gttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaattagata---tgttgttgttg 240  Q
    ||||||||||| ||||| |||||  ||||||||||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||   |||||||||||    
T  17708 gttttgctcaa-ttgttagattgatatattgtgttgttgaattatggttgaattaatgtctaaatgaaatgttgttgaagtagatatgttgttgttgttg 17806  T
Q  241 aattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||| ||| |||  ||||||||||||||||| |  |||||||||||||||||    
T  17807 aatgatatcatgagtattccattttatgaaataagttgtttgtattggtga 17857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 17587 - 17652
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  17587 gatgttgttgttgttaagtgatgttatggatgctaattcatggcttgggtatgcatgattcataat 17652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 14919 - 14750
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||| ||||| || |||||||  |||||||||||||  ||||||||||||||| ||||||||||||||||||||||||     
T  14919 gtgaaaatggatacttatgtgtttttctcaa-ttattggattcagatattgtgttgtcgaattatggttgaatttatgtctaaatgaagtgttgttgaag 14821  T
Q  224 tagata---tgttgttgttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||||||   |||||||||||||| ||| |||| | ||||||||||||||| |  |||||||||||| ||||    
T  14820 tagatatgctgttgttgttgaatgatatcataagcattccattttatgaaataagttgtttgtattagtga 14750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 15021 - 14956
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  15021 gatgttgttgttgttaagtgatgttatggatgctaattcatggcttgggtatgcatgattcataat 14956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 288
Target Start/End: Original strand, 10264 - 10417
Alignment:
Q  138 ttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaattagatatgttgttg 237  Q
    ||||| ||||||||||| ||||| ||||| |||||||||||||| ||||| |||||||||||||| ||| ||||||| ||||||| ||||||||||||||    
T  10264 ttatgtgttttgctcaa-ttgttagattgagatattgtgttgttgaattacggttgaattcatgtataattgaagtgctgttgaagtagatatgttgttg 10362  T
Q  238 tt---gaattataccataggtattccattttatgaagt-tgttgtttgtattggt 288  Q
    ||   |||| ||| |||  ||||||||||| ||||| |  |||||||||||||||    
T  10363 ttacggaatgatatcatgagtattccatttgatgaaataagttgtttgtattggt 10417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 10148 - 10214
Alignment:
Q  23 ggatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  10148 ggatgttgttgttgttaagtgatgttatggatgctaattcatggcttgggtatgcatgattcataat 10214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 307 - 465
Alignment:
Q  124 gtgaaaatgggcacttatgagttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatgtctaaatgaagtgttgttgaat 223  Q
    ||||||||||  ||||||| ||||||||||| ||||||||||| ||||||||||||||           ||||||||||| ||||||||||||||||||     
T  307 gtgaaaatggatacttatgtgttttgctcaa-ttgttggattgtgatattgtgttgtt-----------gaattcatgtccaaatgaagtgttgttgaag 394  T
Q  224 tagata---tgttgttgttgaattataccataggtattccattttatgaagt-tgttgtttgtattggtga 290  Q
    ||||||   |||||||||||||| ||| |||  ||||||||||||||||| |  |||||||||||||||||    
T  395 tagatatgttgttgttgttgaatgataacatgagtattccattttatgaaataagttgtttgtattggtga 465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 212 - 276
Alignment:
Q  25 atgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatttataat 89  Q
    |||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  212 atgttgttgttgttaagtgatgttatggatgctaattcatggcttgagtatgcatgattcataat 276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1204 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 290
Target Start/End: Original strand, 250 - 352
Alignment:
Q  192 tgaattcatgtctaaatgaagt-gttgttgaattagatatgtt---gttgttgaattataccataggtattccattttatgaagttgttgtttgtattgg 287  Q
    ||||||||| | |||||||||| ||||||||||||||||||||   |||||||| ||||||||||||||||||||||| ||||||||| ||||  |||||    
T  250 tgaattcatatttaaatgaagttgttgttgaattagatatgttgttgttgttgatttataccataggtattccattttgtgaagttgtagtttcaattgg 349  T
Q  288 tga 290  Q
    |||    
T  350 tga 352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 276
Target Start/End: Original strand, 20290 - 20387
Alignment:
Q  183 aattatggttgaattcatgtctaaatgaagt-gttgttgaattagatatgttgttgttg---aattataccataggtattccattttatgaagttgtt 276  Q
    |||| ||||| |||||||||||||||||||| |||||||||||| ||||||||||||||   |||||||||||  |||||||||||| ||||||||||    
T  20290 aattgtggttcaattcatgtctaaatgaagttgttgttgaattatatatgttgttgttgctgaattataccatgagtattccattttgtgaagttgtt 20387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 7906 - 7847
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  7906 gatgttgttgttgctaagtgatgttgtggatgttaattcatggcttgggtatgcatgatt 7847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 3391 - 3332
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  3391 gatgttgatgttgctaagtgatgttgtggatgttaattcatggcttgggtatgcatgatt 3332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 290
Target Start/End: Original strand, 1505 - 1607
Alignment:
Q  192 tgaattcatgtctaaatgaagtgttg-ttgaattagatatgtt---gttgttgaattataccataggtattccattttatgaagttgttgtttgtattgg 287  Q
    ||||||||||| ||||||||||  || ||||||||||||||||   |||||||| || |||||| ||||||||||||| ||||||||  ||||| |||||    
T  1505 tgaattcatgtttaaatgaagttatggttgaattagatatgttgttgttgttgacttgtaccatgggtattccattttgtgaagttgaagtttgaattgg 1604  T
Q  288 tga 290  Q
    |||    
T  1605 tga 1607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 290
Target Start/End: Original strand, 9760 - 9862
Alignment:
Q  192 tgaattcatgtctaaatgaagtgttg-ttgaattagatatgtt---gttgttgaattataccataggtattccattttatgaagttgttgtttgtattgg 287  Q
    ||||||||||| ||||||||||  || ||||||||||||||||   |||||||| || |||||| ||||||||||||| ||||||||  ||||| |||||    
T  9760 tgaattcatgtttaaatgaagttatggttgaattagatatgttgttgttgttgacttgtaccatgggtattccattttgtgaagttgaagtttgaattgg 9859  T
Q  288 tga 290  Q
    |||    
T  9860 tga 9862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 7641 - 7582
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||||||||| ||||| | |||| ||||||||||||||||| |||||||||    
T  7641 gatgttgttgttgttaagtcatgttgttgatgataattcatggcttgggtttgcatgatt 7582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 290
Target Start/End: Original strand, 2945 - 3050
Alignment:
Q  192 tgaattcatgtctaaatgaagt-gttgttgaattagata------tgttgttgttgaattataccataggtattccattttatgaagttgttgtttgtat 284  Q
    ||||||||||| |||||||||| ||| ||||||||||||      |||||||||||| || |||||| ||||||||||||| ||||||||| ||||  ||    
T  2945 tgaattcatgtttaaatgaagttgtttttgaattagatatgttgttgttgttgttgatttgtaccatgggtattccattttgtgaagttgtagtttaaat 3044  T
Q  285 tggtga 290  Q
    ||||||    
T  3045 tggtga 3050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 9057 - 9116
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||||||| |||||||||||||    
T  9057 gatgttgttgttgctaagtgatgttgttgatgataattcatggcttaggtatgcatgatt 9116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 5421 - 5480
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| | |||| |||||||||| |||||| |||||||||    
T  5421 gatgttgttgttgctaagtcatgttgttgatgataattcatggtttgggtttgcatgatt 5480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 21584 - 21525
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||||||||||| |||||||||    
T  21584 gatgttgttgttgctaagtcatgttgttgatgataattcatggcttgggtttgcatgatt 21525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 31283 - 31224
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    |||||| |||||| ||||| ||||| | |||| ||||||||||||||||| |||||||||    
T  31283 gatgtttttgttgctaagtcatgttgttgatgataattcatggcttgggtttgcatgatt 31224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 33903 - 33962
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| | |||  |||||||||||||||||||||||||||    
T  33903 gatgttgttgttgctaagtgatgttgttgataataattcatggcttgggtatgcatgatt 33962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 109662 - 109603
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| | |||| |||||||||||||||||||||| ||||    
T  109662 gatgttgttgttgctaagtgatgttgttgatgataattcatggcttgggtatgcacgatt 109603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 112721 - 112776
Alignment:
Q  25 atgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    |||||||||||||||||| ||||| | |||   |||||||||||||||| |||||||||    
T  112721 atgttgttgttgttaagtcatgttgttgat---aattcatggcttgggtttgcatgatt 112776  T

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Target: scaffold1518 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1518
Description:

Target: scaffold1518; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 244 - 188
Alignment:
Q  145 ttttgctcaaattgttggattgggatattgtgttgttaaattatggttgaattcatg 201  Q
    |||||||||||||| || |||| |||||||||||||| |||| ||| ||||||||||    
T  244 ttttgctcaaattggtgaattgtgatattgtgttgttgaattgtggatgaattcatg 188  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 70796 - 70856
Alignment:
Q  23 ggatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    |||||||||||||||| ||| ||||| | |||| ||||||||| ||||||| |||||||||    
T  70796 ggatgttgttgttgtttagtcatgttgttgatgataattcatgacttgggtttgcatgatt 70856  T

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Target: scaffold1867 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 216 - 157
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| || || ||||| | |||| ||||||||||||||||| |||||||||    
T  216 gatgttgttgttgatatgtcatgttgttgatgataattcatggcttgggtttgcatgatt 157  T

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Target: scaffold0833 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 3371 - 3312
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| || || ||||| | |||| ||||||||||||||||| |||||||||    
T  3371 gatgttgttgttgatatgtcatgttgttgatgataattcatggcttgggtttgcatgatt 3312  T

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Target: scaffold0610 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 751 - 810
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| | |||| |||||||||||||||||  ||||||||    
T  751 gatgttgttgttgctaagtcatgttgttgatgataattcatggcttgggttggcatgatt 810  T

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Target: scaffold0359 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 11828 - 11875
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggt 73  Q
    ||||||||||||||||| ||||| | |||| |||||||||||||||||    
T  11828 tgttgttgttgttaagtcatgttgttgatgataattcatggcttgggt 11875  T

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Target: scaffold0338 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 9059 - 9000
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||||||||||| ||| |||||    
T  9059 gatgttgttgttgctaagtcatgttgttgatgataattcatggcttgggtttgcttgatt 9000  T

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Target: scaffold0035 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 109637 - 109696
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||||||||||  |||||||||    
T  109637 gatgttgttgttgctaagtcatgttgttgatgataattcatggcttgggattgcatgatt 109696  T

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Target: scaffold0035; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 118138 - 118197
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| | |||| ||||||||||||||||  |||||||||    
T  118138 gatgttgttgttgctaagtcatgttgttgatgataattcatggcttggggttgcatgatt 118197  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 85404 - 85345
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||||| ||||| | |||| |||||||||| |||||| |||||||||    
T  85404 gatgttgttgttgctaagtcatgttgttgatgataattcatggtttgggtttgcatgatt 85345  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 22763 - 22704
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    |||||||||||||||  || ||||| | |||| ||||||||||||||||| |||||||||    
T  22763 gatgttgttgttgttttgtcatgttgttgatgataattcatggcttgggtttgcatgatt 22704  T

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Target: scaffold0673 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 999 - 1056
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||| || || ||||| | |||| ||||||||||||||||| |||||||||    
T  999 tgttgttgttgatatgtcatgttgttgatgataattcatggcttgggtttgcatgatt 1056  T

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Target: scaffold0673; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 7025 - 7078
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcat 79  Q
    ||||||||||||| ||| ||||| | |||| ||||||||||||||||| |||||    
T  7025 tgttgttgttgtttagtcatgttgttgatgataattcatggcttgggtttgcat 7078  T

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Target: scaffold0116 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 30161 - 30104
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatgatt 83  Q
    ||||||||||||| ||| || || | |||| ||||||||||||||||| |||||||||    
T  30161 tgttgttgttgtttagtcatattgttgatgataattcatggcttgggtttgcatgatt 30104  T

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Target: scaffold0091 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 32273 - 32220
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcat 79  Q
    ||||||||||||| ||| ||||| | |||| ||||||||||||||||| |||||    
T  32273 tgttgttgttgtttagtcatgttgttgatgataattcatggcttgggtttgcat 32220  T

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Target: scaffold0091; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 42030 - 42083
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcat 79  Q
    ||||||||||||| ||| ||||| | |||| ||||||||||||||||| |||||    
T  42030 tgttgttgttgtttagtcatgttgttgatgataattcatggcttgggtttgcat 42083  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 14287 - 14234
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcat 79  Q
    ||||||||||||| ||| ||||| | |||| ||||||||||||||||| |||||    
T  14287 tgttgttgttgtttagtcatgttgttgatgataattcatggcttgggtttgcat 14234  T

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Target: scaffold0083; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 14947 - 14894
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcat 79  Q
    ||||||||||||| ||| ||||| | |||| ||||||||||||||||| |||||    
T  14947 tgttgttgttgtttagtcatgttgttgatgataattcatggcttgggtttgcat 14894  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 164285 - 164232
Alignment:
Q  26 tgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcat 79  Q
    ||||||||||||| ||| ||||| | |||| ||||||||||||||||| |||||    
T  164285 tgttgttgttgtttagtcatgttgttgatggtaattcatggcttgggtttgcat 164232  T

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Target: scaffold0396 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 11883 - 11939
Alignment:
Q  24 gatgttgttgttgttaagtaatgttatggatgttaattcatggcttgggtatgcatg 80  Q
    ||||||||||||| ||||| ||||| | |||| |||||||||||||| || ||||||    
T  11883 gatgttgttgttgctaagtcatgttgttgatgataattcatggcttgagtttgcatg 11939  T

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