View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7099_low_12 (Length: 227)
Name: NF7099_low_12
Description: NF7099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7099_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 46875115 - 46875329
Alignment:
| Q |
1 |
tctgaaataaaccgattcaatatgctcctgtccaaaaacaacgactggatcgtagctcctgataggatttgcgcaatcgagagttacaatcagataaata |
100 |
Q |
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| T |
46875115 |
tctgaaataaaccgattcaatatgctcctgtccaaaaacaacgactggatcgtagctcctgataggatttgcgcaatcgagagttacaatcagataaata |
46875214 |
T |
|
| Q |
101 |
tgaggggattttaagcaaattgaagggtctgcaaagcaaaggtcatactggcaagaaaatctaatgtatcccatgagcaggagtaggatgtacctttgtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46875215 |
tgaggggattttaagcaaattgaagggtctgcaaagcaaatctcatattggcaagaaaatctaatgtatcccatgagcaggagtaggatgtacctttgtt |
46875314 |
T |
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| Q |
201 |
ttgaaccacacaggt |
215 |
Q |
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||||||||||||||| |
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| T |
46875315 |
ttgaaccacacaggt |
46875329 |
T |
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