View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7099_low_9 (Length: 258)
Name: NF7099_low_9
Description: NF7099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7099_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 35899981 - 35899889
Alignment:
| Q |
146 |
ttaaaatacccttcaaaaagcaacttgcgacacgcc-taagagtattggaacatgcaaacatggacaatcaaagccagaggcaagtattttga |
237 |
Q |
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| T |
35899981 |
ttaaaatacccttcaaaaagcaacttgcgacacgccgtaagagtattggaacatgcaaacatggacaatcaaagccagaggcaagtattttga |
35899889 |
T |
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Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35900126 - 35900078
Alignment:
| Q |
1 |
gggtgtgtttgtgagtagggttttagagggttttggagggtgttaagtc |
49 |
Q |
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| T |
35900126 |
gggtgtgtttgcgagtaggattttagagggttttggagggtgttaagtc |
35900078 |
T |
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