View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7100_low_2 (Length: 509)

Name: NF7100_low_2
Description: NF7100
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7100_low_2
NF7100_low_2
[»] chr1 (68 HSPs)
chr1 (48-440)||(3544248-3544640)
chr1 (50-440)||(1247733-1248123)
chr1 (48-439)||(20987756-20988146)
chr1 (48-406)||(13867021-13867372)
chr1 (47-419)||(5809181-5809553)
chr1 (1-358)||(32352541-32352896)
chr1 (52-255)||(45795880-45796083)
chr1 (1-358)||(48072655-48073017)
chr1 (53-367)||(19014203-19014518)
chr1 (1-386)||(25504193-25504580)
chr1 (45-327)||(40562818-40563100)
chr1 (144-415)||(28358586-28358859)
chr1 (30-277)||(38070415-38070661)
chr1 (48-201)||(52692072-52692225)
chr1 (441-509)||(30077601-30077669)
chr1 (252-358)||(5497891-5497997)
chr1 (441-509)||(18107278-18107346)
chr1 (441-509)||(52279996-52280064)
chr1 (227-379)||(6051383-6051535)
chr1 (441-509)||(6948787-6948855)
chr1 (446-509)||(36004878-36004941)
chr1 (10-95)||(37531120-37531205)
chr1 (1-126)||(39430831-39430956)
chr1 (233-334)||(45271027-45271128)
chr1 (164-304)||(48434867-48435007)
chr1 (11-157)||(7396152-7396298)
chr1 (251-319)||(7395988-7396056)
chr1 (444-504)||(18107397-18107457)
chr1 (1-157)||(28097396-28097552)
chr1 (251-330)||(26721437-26721516)
chr1 (227-298)||(35541814-35541885)
chr1 (444-504)||(6948907-6948967)
chr1 (251-319)||(17708862-17708930)
chr1 (253-328)||(33259961-33260036)
chr1 (253-328)||(33280120-33280195)
chr1 (1-301)||(49264251-49264550)
chr1 (165-304)||(32642589-32642728)
chr1 (440-509)||(13615297-13615366)
chr1 (239-379)||(47622285-47622425)
chr1 (446-509)||(20507601-20507664)
chr1 (27-126)||(20796237-20796336)
chr1 (239-298)||(20796452-20796511)
chr1 (30-169)||(27393367-27393506)
chr1 (228-298)||(19042904-19042974)
chr1 (239-301)||(39431078-39431140)
chr1 (251-296)||(3074548-3074593)
chr1 (252-324)||(5283140-5283212)
chr1 (48-124)||(31068727-31068803)
chr1 (229-301)||(42475184-42475256)
chr1 (77-124)||(44890076-44890123)
chr1 (251-309)||(10710482-10710539)
chr1 (53-115)||(11649769-11649831)
chr1 (77-126)||(45270871-45270920)
chr1 (54-121)||(13112754-13112821)
chr1 (251-314)||(43943750-43943813)
chr1 (69-124)||(51799595-51799650)
chr1 (227-301)||(2654889-2654963)
chr1 (252-330)||(22191039-22191117)
chr1 (452-509)||(35078496-35078554)
chr1 (448-509)||(36004789-36004851)
chr1 (261-379)||(51052695-51052813)
chr1 (73-122)||(26131897-26131946)
chr1 (81-118)||(34352985-34353022)
chr1 (53-94)||(43943971-43944012)
chr1 (234-286)||(16586500-16586552)
chr1 (479-507)||(18976299-18976327)
chr1 (270-330)||(27889548-27889608)
chr1 (258-298)||(30650308-30650348)
[»] chr6 (72 HSPs)
chr6 (48-440)||(14843284-14843676)
chr6 (48-440)||(25350823-25351216)
chr6 (51-417)||(26514328-26514695)
chr6 (48-436)||(14686159-14686547)
chr6 (1-352)||(15674383-15674737)
chr6 (1-386)||(33640471-33640856)
chr6 (48-367)||(19350545-19350864)
chr6 (27-331)||(502788-503092)
chr6 (48-418)||(32186284-32186654)
chr6 (10-358)||(26205904-26206244)
chr6 (1-122)||(23346932-23347053)
chr6 (48-218)||(29976377-29976547)
chr6 (441-509)||(2142250-2142318)
chr6 (54-352)||(13563165-13563469)
chr6 (441-509)||(24484929-24484997)
chr6 (439-509)||(7098150-7098220)
chr6 (227-360)||(10362927-10363059)
chr6 (1-158)||(13086093-13086250)
chr6 (444-504)||(7098271-7098331)
chr6 (1-149)||(33805334-33805482)
chr6 (30-325)||(13938302-13938596)
chr6 (48-297)||(1104237-1104486)
chr6 (441-509)||(7507856-7507924)
chr6 (69-386)||(21629323-21629640)
chr6 (1-319)||(11060130-11060448)
chr6 (251-319)||(649341-649409)
chr6 (441-509)||(7506791-7506859)
chr6 (56-325)||(17605596-17605865)
chr6 (1-133)||(19256194-19256326)
chr6 (227-298)||(2554385-2554456)
chr6 (450-504)||(7507758-7507812)
chr6 (239-301)||(13086335-13086397)
chr6 (440-509)||(7545688-7545757)
chr6 (227-336)||(17576968-17577077)
chr6 (441-498)||(32737705-32737762)
chr6 (189-298)||(18681863-18681972)
chr6 (189-298)||(24766703-24766812)
chr6 (72-124)||(34600891-34600943)
chr6 (72-124)||(34627436-34627488)
chr6 (72-124)||(34722168-34722220)
chr6 (14-93)||(25318414-25318493)
chr6 (75-126)||(34434888-34434939)
chr6 (6-97)||(4478550-4478641)
chr6 (152-300)||(17712882-17713030)
chr6 (251-297)||(17078357-17078403)
chr6 (234-300)||(19616166-19616232)
chr6 (1-155)||(23065478-23065632)
chr6 (251-352)||(2923634-2923735)
chr6 (1-122)||(21549402-21549523)
chr6 (239-296)||(21549639-21549696)
chr6 (440-509)||(24484805-24484873)
chr6 (236-300)||(33753458-33753522)
chr6 (234-337)||(1307917-1308020)
chr6 (455-509)||(7545582-7545639)
chr6 (239-286)||(11469365-11469412)
chr6 (257-304)||(32198012-32198059)
chr6 (48-102)||(5668346-5668400)
chr6 (69-155)||(10576682-10576768)
chr6 (7-121)||(11469128-11469242)
chr6 (239-285)||(14372293-14372339)
chr6 (258-328)||(24573864-24573934)
chr6 (227-300)||(12673406-12673479)
chr6 (76-109)||(12687244-12687277)
chr6 (45-94)||(24573714-24573763)
chr6 (30-94)||(10919957-10920021)
chr6 (70-118)||(15161265-15161313)
chr6 (70-118)||(15472096-15472144)
chr6 (1-109)||(17078668-17078776)
chr6 (30-126)||(18682035-18682131)
chr6 (59-155)||(20882465-20882561)
chr6 (70-126)||(26586823-26586879)
chr6 (453-509)||(32738013-32738069)
[»] chr3 (93 HSPs)
chr3 (48-440)||(31675532-31675924)
chr3 (48-440)||(31920499-31920890)
chr3 (48-433)||(40512878-40513263)
chr3 (48-436)||(34829994-34830382)
chr3 (48-415)||(19875844-19876211)
chr3 (1-358)||(6175706-6176064)
chr3 (194-440)||(53941993-53942239)
chr3 (45-414)||(55367208-55367576)
chr3 (1-158)||(30166773-30166930)
chr3 (1-106)||(29309962-29310067)
chr3 (30-378)||(962372-962720)
chr3 (138-367)||(14309263-14309499)
chr3 (444-509)||(49679230-49679295)
chr3 (439-509)||(42613130-42613200)
chr3 (441-509)||(27959140-27959208)
chr3 (1-126)||(21739984-21740109)
chr3 (227-379)||(2365058-2365210)
chr3 (10-330)||(43120931-43121251)
chr3 (56-386)||(12341456-12341786)
chr3 (446-509)||(31523630-31523693)
chr3 (239-386)||(48569224-48569371)
chr3 (183-298)||(19919518-19919633)
chr3 (231-360)||(17270969-17271098)
chr3 (227-379)||(34332023-34332175)
chr3 (45-298)||(18381656-18381899)
chr3 (1-296)||(15481049-15481344)
chr3 (233-343)||(16672265-16672375)
chr3 (228-298)||(52907331-52907401)
chr3 (1-158)||(36709464-36709621)
chr3 (448-509)||(45799132-45799193)
chr3 (239-319)||(23819357-23819437)
chr3 (239-331)||(46907926-46908018)
chr3 (441-509)||(53642069-53642137)
chr3 (441-496)||(28792331-28792386)
chr3 (234-364)||(8130760-8130890)
chr3 (48-158)||(25024273-25024383)
chr3 (228-330)||(50545024-50545126)
chr3 (255-333)||(52250379-52250457)
chr3 (239-300)||(24925972-24926033)
chr3 (192-294)||(36731638-36731740)
chr3 (1-122)||(42674904-42675025)
chr3 (1-122)||(45684730-45684851)
chr3 (45-126)||(48930324-48930405)
chr3 (30-126)||(3141434-3141530)
chr3 (42-126)||(10868198-10868282)
chr3 (52-124)||(53941908-53941980)
chr3 (239-298)||(16179732-16179791)
chr3 (48-296)||(22734014-22734262)
chr3 (239-301)||(14863742-14863804)
chr3 (239-301)||(21739774-21739836)
chr3 (230-316)||(30166594-30166680)
chr3 (1-126)||(14863926-14864051)
chr3 (239-296)||(17077588-17077645)
chr3 (42-158)||(24926117-24926233)
chr3 (441-485)||(28219540-28219584)
chr3 (72-124)||(35502975-35503027)
chr3 (30-126)||(48569500-48569596)
chr3 (233-319)||(6825598-6825684)
chr3 (255-337)||(7164296-7164378)
chr3 (258-328)||(8948278-8948348)
chr3 (132-210)||(20356787-20356865)
chr3 (252-330)||(44888709-44888787)
chr3 (72-126)||(52250586-52250640)
chr3 (56-157)||(10323001-10323102)
chr3 (240-301)||(10868437-10868498)
chr3 (441-502)||(28792436-28792497)
chr3 (239-300)||(36709701-36709762)
chr3 (239-300)||(42674725-42674786)
chr3 (45-126)||(43284812-43284893)
chr3 (233-298)||(48930512-48930577)
chr3 (239-327)||(19891469-19891557)
chr3 (48-124)||(38456753-38456829)
chr3 (48-100)||(42807270-42807322)
chr3 (251-315)||(47538071-47538135)
chr3 (54-106)||(47772921-47772973)
chr3 (54-121)||(1231690-1231757)
chr3 (86-157)||(16179586-16179657)
chr3 (30-141)||(46190075-46190186)
chr3 (3-106)||(54439588-54439691)
chr3 (48-102)||(6893257-6893311)
chr3 (80-158)||(8943969-8944047)
chr3 (30-152)||(9510335-9510457)
chr3 (30-152)||(9518310-9518432)
chr3 (230-328)||(17914449-17914547)
chr3 (444-480)||(20494572-20494608)
chr3 (258-298)||(20797918-20797958)
chr3 (70-126)||(30188413-30188469)
chr3 (441-509)||(31523749-31523816)
chr3 (70-178)||(35273710-35273818)
chr3 (441-509)||(42613007-42613074)
chr3 (441-509)||(49679351-49679418)
chr3 (42-102)||(52907700-52907760)
chr3 (441-509)||(53642180-53642248)
[»] chr5 (69 HSPs)
chr5 (48-440)||(380502-380894)
chr5 (1-158)||(10486348-10486506)
chr5 (52-358)||(42259885-42260193)
chr5 (42-331)||(22094505-22094795)
chr5 (1-214)||(34481502-34481715)
chr5 (22-352)||(588082-588412)
chr5 (99-297)||(26261608-26261805)
chr5 (441-509)||(3041264-3041332)
chr5 (30-298)||(33170241-33170509)
chr5 (48-126)||(476814-476892)
chr5 (441-509)||(2984347-2984415)
chr5 (441-509)||(36290652-36290720)
chr5 (56-296)||(10780810-10781050)
chr5 (189-377)||(28534886-28535074)
chr5 (27-212)||(35637715-35637899)
chr5 (227-379)||(42514500-42514652)
chr5 (51-325)||(22174258-22174530)
chr5 (56-298)||(8299471-8299713)
chr5 (232-337)||(21084666-21084771)
chr5 (56-298)||(30731603-30731845)
chr5 (1-158)||(35122135-35122292)
chr5 (1-330)||(20207977-20208305)
chr5 (39-171)||(26262292-26262424)
chr5 (441-509)||(11960546-11960614)
chr5 (227-379)||(23239163-23239315)
chr5 (441-504)||(40162666-40162729)
chr5 (1-300)||(38358021-38358320)
chr5 (446-507)||(8675073-8675134)
chr5 (10-158)||(31864797-31864945)
chr5 (255-330)||(6050048-6050123)
chr5 (239-298)||(27796276-27796335)
chr5 (201-337)||(35983041-35983177)
chr5 (233-328)||(41590875-41590970)
chr5 (462-509)||(41660156-41660203)
chr5 (234-364)||(36256562-36256692)
chr5 (233-334)||(4297562-4297663)
chr5 (88-298)||(25856728-25856938)
chr5 (239-300)||(35121975-35122036)
chr5 (10-158)||(31864352-31864500)
chr5 (449-509)||(40162780-40162840)
chr5 (230-309)||(15861963-15862042)
chr5 (251-337)||(19838368-19838455)
chr5 (39-170)||(26262848-26262979)
chr5 (228-379)||(30509231-30509382)
chr5 (27-158)||(30509476-30509607)
chr5 (228-379)||(30549574-30549725)
chr5 (27-158)||(30549816-30549947)
chr5 (257-331)||(10486158-10486232)
chr5 (239-301)||(19506790-19506852)
chr5 (251-309)||(29572148-29572206)
chr5 (251-309)||(29573525-29573583)
chr5 (251-309)||(29574902-29574960)
chr5 (251-309)||(29576279-29576337)
chr5 (251-309)||(29577656-29577714)
chr5 (251-309)||(29579033-29579091)
chr5 (227-296)||(22437998-22438067)
chr5 (86-166)||(26263407-26263487)
chr5 (441-509)||(36290529-36290596)
chr5 (164-296)||(3580884-3581016)
chr5 (441-491)||(2883775-2883825)
chr5 (251-293)||(6885717-6885759)
chr5 (452-509)||(31110285-31110342)
chr5 (261-386)||(33385174-33385299)
chr5 (1-105)||(19512947-19513051)
chr5 (48-103)||(22437817-22437872)
chr5 (66-120)||(27796103-27796157)
chr5 (48-102)||(28455889-28455943)
chr5 (449-509)||(2883129-2883189)
chr5 (441-509)||(3041388-3041455)
[»] scaffold0043 (1 HSPs)
scaffold0043 (48-266)||(33930-34148)
[»] chr4 (88 HSPs)
chr4 (48-335)||(43516000-43516287)
chr4 (1-358)||(23872706-23873062)
chr4 (48-418)||(2072141-2072511)
chr4 (1-379)||(55299166-55299553)
chr4 (10-158)||(3129418-3129566)
chr4 (1-358)||(19114990-19115347)
chr4 (42-331)||(8935669-8935958)
chr4 (5-316)||(7662579-7662890)
chr4 (48-379)||(9691023-9691355)
chr4 (1-214)||(20675576-20675789)
chr4 (27-386)||(19648282-19648634)
chr4 (5-107)||(2631956-2632058)
chr4 (144-346)||(29553042-29553244)
chr4 (441-509)||(56269033-56269101)
chr4 (437-509)||(36688141-36688213)
chr4 (441-509)||(42010167-42010235)
chr4 (30-298)||(55724996-55725263)
chr4 (441-509)||(1015811-1015879)
chr4 (441-509)||(5524497-5524565)
chr4 (441-509)||(47834614-47834682)
chr4 (56-379)||(23641799-23642122)
chr4 (441-509)||(5361476-5361544)
chr4 (440-504)||(46238902-46238966)
chr4 (39-379)||(2365598-2365937)
chr4 (441-504)||(53526025-53526088)
chr4 (252-358)||(20675840-20675946)
chr4 (443-504)||(28405263-28405324)
chr4 (83-325)||(38296342-38296583)
chr4 (227-379)||(1827748-1827900)
chr4 (227-379)||(23647457-23647609)
chr4 (441-509)||(32146553-32146621)
chr4 (239-331)||(34976733-34976825)
chr4 (441-509)||(46239017-46239085)
chr4 (441-504)||(17492939-17493002)
chr4 (441-504)||(55160446-55160509)
chr4 (439-509)||(17493053-17493123)
chr4 (449-509)||(25219047-25219107)
chr4 (441-509)||(28405375-28405443)
chr4 (441-509)||(37002208-37002276)
chr4 (441-509)||(53526139-53526207)
chr4 (51-126)||(42952966-42953041)
chr4 (56-379)||(47419413-47419736)
chr4 (48-163)||(56336925-56337039)
chr4 (1-300)||(26694482-26694781)
chr4 (441-509)||(17317257-17317325)
chr4 (444-504)||(32146442-32146502)
chr4 (251-319)||(42779054-42779122)
chr4 (251-330)||(10562581-10562660)
chr4 (234-337)||(19308837-19308940)
chr4 (239-298)||(19733277-19733336)
chr4 (239-298)||(48312886-48312945)
chr4 (239-298)||(54482449-54482508)
chr4 (239-301)||(42952817-42952879)
chr4 (227-379)||(19756047-19756199)
chr4 (227-379)||(19783607-19783759)
chr4 (442-494)||(25218935-25218987)
chr4 (266-337)||(15342639-15342710)
chr4 (227-286)||(15741000-15741059)
chr4 (441-504)||(17317145-17317207)
chr4 (42-133)||(23657892-23657983)
chr4 (251-297)||(20396386-20396432)
chr4 (455-509)||(28701805-28701859)
chr4 (234-319)||(19837922-19838007)
chr4 (267-328)||(29133683-29133744)
chr4 (268-377)||(55464091-55464200)
chr4 (227-327)||(29328041-29328141)
chr4 (461-509)||(55160347-55160395)
chr4 (258-337)||(3129226-3129305)
chr4 (1-155)||(10562765-10562919)
chr4 (234-364)||(19162392-19162522)
chr4 (48-170)||(55464290-55464412)
chr4 (1-122)||(53810395-53810516)
chr4 (440-480)||(5361369-5361409)
chr4 (441-509)||(5524374-5524441)
chr4 (30-126)||(48312677-48312773)
chr4 (66-126)||(54482620-54482680)
chr4 (232-287)||(17826062-17826117)
chr4 (258-300)||(20509258-20509300)
chr4 (227-301)||(45636290-45636364)
chr4 (45-158)||(7099080-7099193)
chr4 (440-509)||(37002332-37002400)
chr4 (86-159)||(40688705-40688778)
chr4 (77-126)||(51072154-51072203)
chr4 (480-509)||(56453816-56453845)
chr4 (138-170)||(13158220-13158252)
chr4 (234-338)||(14538269-14538373)
chr4 (251-319)||(53486197-53486265)
chr4 (441-509)||(56269158-56269225)
[»] chr8 (71 HSPs)
chr8 (48-440)||(25193689-25194081)
chr8 (1-330)||(7452906-7453235)
chr8 (47-367)||(6245682-6246004)
chr8 (45-379)||(29721119-29721452)
chr8 (45-286)||(36025119-36025360)
chr8 (48-331)||(12341168-12341451)
chr8 (145-328)||(15539755-15539938)
chr8 (27-384)||(4987268-4987625)
chr8 (48-277)||(37165431-37165660)
chr8 (1-314)||(36157708-36158021)
chr8 (441-509)||(26749505-26749573)
chr8 (49-297)||(18187748-18187995)
chr8 (441-509)||(1937111-1937179)
chr8 (189-377)||(9923343-9923531)
chr8 (56-325)||(17700089-17700358)
chr8 (441-509)||(24241714-24241782)
chr8 (446-509)||(17867621-17867684)
chr8 (252-358)||(16375332-16375438)
chr8 (227-337)||(7925166-7925276)
chr8 (48-126)||(15439718-15439796)
chr8 (48-126)||(15531022-15531100)
chr8 (48-170)||(16048333-16048455)
chr8 (56-298)||(20824908-20825151)
chr8 (227-324)||(4991959-4992056)
chr8 (233-334)||(36493167-36493268)
chr8 (227-331)||(12332628-12332732)
chr8 (441-509)||(30905012-30905080)
chr8 (441-504)||(17867735-17867798)
chr8 (1-301)||(23942641-23942941)
chr8 (51-126)||(24794350-24794425)
chr8 (189-379)||(26774455-26774645)
chr8 (251-319)||(17659645-17659713)
chr8 (449-509)||(34612614-34612674)
chr8 (227-298)||(8300583-8300654)
chr8 (239-298)||(13878776-13878835)
chr8 (239-301)||(24794512-24794574)
chr8 (239-296)||(6901729-6901786)
chr8 (1-102)||(44082497-44082598)
chr8 (453-509)||(11090556-11090612)
chr8 (164-337)||(41691010-41691183)
chr8 (48-296)||(5585290-5585538)
chr8 (51-126)||(11393809-11393884)
chr8 (445-504)||(30904902-30904961)
chr8 (228-379)||(32267335-32267486)
chr8 (227-298)||(41664657-41664728)
chr8 (27-126)||(43249265-43249364)
chr8 (251-330)||(45255097-45255176)
chr8 (239-301)||(11393617-11393679)
chr8 (42-103)||(8902422-8902483)
chr8 (239-296)||(43612476-43612533)
chr8 (56-126)||(25090996-25091066)
chr8 (252-346)||(28453711-28453805)
chr8 (227-301)||(43775057-43775131)
chr8 (251-296)||(28992510-28992555)
chr8 (230-286)||(8445596-8445652)
chr8 (446-502)||(11090445-11090501)
chr8 (48-103)||(7180011-7180066)
chr8 (450-509)||(26749629-26749687)
chr8 (251-297)||(10530464-10530510)
chr8 (84-126)||(12332485-12332527)
chr8 (66-120)||(13878954-13879008)
chr8 (69-155)||(37434391-37434477)
chr8 (239-301)||(43249090-43249152)
chr8 (239-296)||(12135015-12135072)
chr8 (60-121)||(24425355-24425416)
chr8 (444-509)||(34612493-34612557)
chr8 (48-124)||(460066-460142)
chr8 (1-97)||(12134881-12134977)
chr8 (1-109)||(17659385-17659493)
chr8 (54-158)||(25320418-25320522)
chr8 (438-478)||(31007789-31007829)
[»] scaffold0002 (3 HSPs)
scaffold0002 (1-159)||(327563-327721)
scaffold0002 (1-159)||(312109-312267)
scaffold0002 (257-334)||(311926-312003)
[»] scaffold0029 (2 HSPs)
scaffold0029 (1-159)||(134282-134440)
scaffold0029 (257-334)||(134098-134175)
[»] chr7 (90 HSPs)
chr7 (48-367)||(27218342-27218661)
chr7 (45-394)||(33820752-33821101)
chr7 (48-344)||(19544647-19544941)
chr7 (1-386)||(45993129-45993515)
chr7 (1-316)||(46626376-46626691)
chr7 (1-358)||(13440607-13440969)
chr7 (1-159)||(15653136-15653291)
chr7 (48-284)||(34104078-34104314)
chr7 (67-219)||(39658755-39658907)
chr7 (439-509)||(47080479-47080549)
chr7 (441-509)||(47799857-47799925)
chr7 (441-509)||(28528601-28528669)
chr7 (189-377)||(17721377-17721565)
chr7 (56-379)||(4937336-4937659)
chr7 (440-509)||(14696713-14696782)
chr7 (441-509)||(32520286-32520354)
chr7 (441-504)||(4269116-4269179)
chr7 (441-504)||(32520385-32520448)
chr7 (78-298)||(29968605-29968825)
chr7 (441-509)||(30102544-30102612)
chr7 (78-298)||(11276537-11276757)
chr7 (441-504)||(30102430-30102493)
chr7 (446-509)||(31236217-31236280)
chr7 (45-159)||(23887681-23887795)
chr7 (45-159)||(23898857-23898971)
chr7 (447-509)||(30588585-30588647)
chr7 (455-509)||(35737163-35737217)
chr7 (447-504)||(14696833-14696890)
chr7 (441-500)||(19027763-19027822)
chr7 (442-509)||(19888992-19889059)
chr7 (441-500)||(20726814-20726873)
chr7 (227-334)||(41805012-41805119)
chr7 (227-333)||(25018556-25018662)
chr7 (30-172)||(39931011-39931153)
chr7 (1-158)||(5327317-5327474)
chr7 (1-126)||(13553645-13553770)
chr7 (5-122)||(41340091-41340208)
chr7 (440-496)||(4269240-4269296)
chr7 (228-296)||(41340330-41340398)
chr7 (48-219)||(20918561-20918731)
chr7 (20-158)||(17856302-17856439)
chr7 (1-300)||(18767962-18768261)
chr7 (239-301)||(19735310-19735372)
chr7 (56-126)||(31423211-31423281)
chr7 (234-364)||(45164770-45164900)
chr7 (239-316)||(28173254-28173331)
chr7 (251-319)||(34232505-34232573)
chr7 (441-509)||(19027636-19027708)
chr7 (51-126)||(19735122-19735197)
chr7 (441-509)||(20726928-20727000)
chr7 (239-298)||(23054259-23054318)
chr7 (239-298)||(36227440-36227499)
chr7 (48-125)||(2820185-2820261)
chr7 (251-300)||(4078081-4078130)
chr7 (183-337)||(4164775-4164929)
chr7 (449-509)||(33057207-33057268)
chr7 (183-337)||(34207066-34207220)
chr7 (1-122)||(34457623-34457744)
chr7 (258-298)||(34791964-34792004)
chr7 (239-286)||(31423386-31423433)
chr7 (227-298)||(45871543-45871614)
chr7 (252-330)||(17056334-17056412)
chr7 (251-296)||(2820012-2820057)
chr7 (234-327)||(6335652-6335745)
chr7 (228-297)||(18671952-18672021)
chr7 (251-296)||(29917024-29917069)
chr7 (251-296)||(39930887-39930932)
chr7 (67-126)||(2678822-2678881)
chr7 (257-328)||(22818976-22819047)
chr7 (303-394)||(23887829-23887920)
chr7 (229-300)||(28740222-28740293)
chr7 (479-509)||(989179-989209)
chr7 (72-126)||(20562828-20562882)
chr7 (479-509)||(47271142-47271172)
chr7 (227-292)||(4344630-4344695)
chr7 (30-126)||(11341379-11341476)
chr7 (1-102)||(18671724-18671825)
chr7 (55-124)||(29375687-29375756)
chr7 (1-122)||(36227615-36227736)
chr7 (234-319)||(45460099-45460184)
chr7 (87-219)||(6335772-6335904)
chr7 (445-477)||(8256408-8256440)
chr7 (86-166)||(9895537-9895617)
chr7 (230-286)||(18317138-18317194)
chr7 (67-159)||(32815743-32815835)
chr7 (479-507)||(33450559-33450587)
chr7 (479-507)||(34985940-34985968)
chr7 (234-298)||(37942143-37942207)
chr7 (48-124)||(40681747-40681823)
chr7 (441-509)||(47799981-47800048)
[»] scaffold0131 (2 HSPs)
scaffold0131 (10-219)||(3924-4133)
scaffold0131 (257-316)||(3819-3878)
[»] chr2 (74 HSPs)
chr2 (1-316)||(45422074-45422389)
chr2 (86-436)||(33583579-33583928)
chr2 (47-366)||(11196951-11197271)
chr2 (45-436)||(6824009-6824398)
chr2 (10-379)||(13551133-13551514)
chr2 (1-331)||(15018231-15018561)
chr2 (1-214)||(26893985-26894198)
chr2 (1-214)||(26899424-26899637)
chr2 (10-214)||(13550680-13550884)
chr2 (27-333)||(26146795-26147101)
chr2 (441-509)||(23459803-23459871)
chr2 (441-509)||(29188704-29188772)
chr2 (441-509)||(3354737-3354805)
chr2 (441-504)||(3594794-3594857)
chr2 (448-509)||(8988905-8988966)
chr2 (441-509)||(375043-375111)
chr2 (27-158)||(11233919-11234050)
chr2 (1-300)||(28399837-28400136)
chr2 (439-504)||(40254225-40254290)
chr2 (441-509)||(13780549-13780617)
chr2 (441-509)||(41435160-41435228)
chr2 (441-505)||(42380248-42380312)
chr2 (441-504)||(41435279-41435342)
chr2 (446-507)||(40254111-40254172)
chr2 (54-219)||(44028588-44028753)
chr2 (441-509)||(3594908-3594976)
chr2 (1-309)||(35488391-35488700)
chr2 (441-504)||(6287979-6288042)
chr2 (441-504)||(13780435-13780498)
chr2 (27-333)||(43310839-43311145)
chr2 (441-509)||(6288095-6288163)
chr2 (449-509)||(8008735-8008795)
chr2 (441-509)||(23464303-23464370)
chr2 (251-331)||(25380650-25380730)
chr2 (227-327)||(34357588-34357688)
chr2 (1-297)||(9668296-9668592)
chr2 (234-364)||(13416473-13416603)
chr2 (86-364)||(2207045-2207323)
chr2 (48-298)||(14440345-14440595)
chr2 (48-155)||(12646122-12646229)
chr2 (239-298)||(12646342-12646401)
chr2 (240-331)||(22724695-22724786)
chr2 (234-300)||(3153106-3153172)
chr2 (239-297)||(8065551-8065609)
chr2 (27-121)||(36804699-36804793)
chr2 (255-328)||(10689346-10689419)
chr2 (1-149)||(11028424-11028572)
chr2 (48-124)||(21579629-21579705)
chr2 (53-108)||(13138961-13139016)
chr2 (251-298)||(33515482-33515529)
chr2 (30-121)||(33515673-33515764)
chr2 (233-292)||(43722321-43722380)
chr2 (270-352)||(4222175-4222257)
chr2 (239-301)||(11233775-11233837)
chr2 (48-126)||(20004560-20004638)
chr2 (239-296)||(28253521-28253578)
chr2 (234-319)||(44028481-44028566)
chr2 (270-330)||(2282605-2282665)
chr2 (258-338)||(20946838-20946918)
chr2 (10-158)||(25380823-25380971)
chr2 (48-103)||(40430015-40430070)
chr2 (479-509)||(2063404-2063434)
chr2 (234-364)||(6724855-6724985)
chr2 (90-168)||(9006414-9006492)
chr2 (258-328)||(10289325-10289395)
chr2 (227-337)||(12605693-12605803)
chr2 (252-298)||(18669506-18669552)
chr2 (441-471)||(36402389-36402419)
chr2 (478-508)||(36758855-36758885)
chr2 (63-145)||(37437606-37437688)
chr2 (81-126)||(7301297-7301342)
chr2 (441-509)||(8008622-8008691)
chr2 (45-126)||(43722504-43722585)
chr2 (441-509)||(8988783-8988850)
[»] scaffold0418 (1 HSPs)
scaffold0418 (1-316)||(8158-8473)
[»] scaffold0048 (1 HSPs)
scaffold0048 (51-366)||(63521-63835)
[»] scaffold0016 (1 HSPs)
scaffold0016 (27-333)||(28354-28660)
[»] scaffold1350 (1 HSPs)
scaffold1350 (56-298)||(153-395)
[»] scaffold0189 (1 HSPs)
scaffold0189 (42-327)||(6683-6971)
[»] scaffold0034 (1 HSPs)
scaffold0034 (56-379)||(105051-105374)
[»] scaffold0664 (2 HSPs)
scaffold0664 (441-509)||(4657-4725)
scaffold0664 (444-504)||(4776-4836)
[»] scaffold0308 (1 HSPs)
scaffold0308 (6-158)||(17704-17856)
[»] scaffold0171 (2 HSPs)
scaffold0171 (441-509)||(17261-17331)
scaffold0171 (441-509)||(17387-17454)
[»] scaffold0712 (1 HSPs)
scaffold0712 (441-509)||(3030-3098)
[»] scaffold0709 (1 HSPs)
scaffold0709 (441-509)||(3050-3118)
[»] scaffold0472 (1 HSPs)
scaffold0472 (56-298)||(3861-4103)
[»] scaffold0179 (4 HSPs)
scaffold0179 (253-330)||(8338-8415)
scaffold0179 (253-330)||(13272-13349)
scaffold0179 (1-155)||(8086-8240)
scaffold0179 (1-155)||(13020-13174)
[»] scaffold0238 (1 HSPs)
scaffold0238 (440-502)||(25689-25751)
[»] scaffold0026 (1 HSPs)
scaffold0026 (239-386)||(67872-68019)
[»] scaffold0007 (1 HSPs)
scaffold0007 (251-309)||(182919-182977)
[»] scaffold0061 (1 HSPs)
scaffold0061 (232-333)||(55450-55551)
[»] scaffold0017 (1 HSPs)
scaffold0017 (232-333)||(143082-143183)
[»] scaffold0112 (1 HSPs)
scaffold0112 (239-298)||(14950-15009)
[»] scaffold0094 (1 HSPs)
scaffold0094 (252-300)||(26105-26153)
[»] scaffold1809 (1 HSPs)
scaffold1809 (251-294)||(1093-1136)
[»] scaffold0233 (1 HSPs)
scaffold0233 (69-124)||(11011-11066)
[»] scaffold0113 (1 HSPs)
scaffold0113 (51-103)||(36108-36160)


Alignment Details
Target: chr1 (Bit Score: 312; Significance: 1e-176; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 48 - 440
Target Start/End: Complemental strand, 3544640 - 3544248
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||| ||||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  3544640 accctataccaaaaaccatctctatctaccaacattcgccaacaccatttacctaacaaaacacaattaaactccctcagctatctcactcccaaccctc 3544541  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  3544540 catactccttttgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccaaaaaaatttattaaaaatagattcaat 3544441  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagag 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  3544440 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagtcttgagaagaatcaaccgacccccaaaagag 3544341  T
Q  348 agaaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggctaacctcttcggatcaccaccaatagaa 440  Q
    ||| |||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3544340 agagagcgactttgccaccccgataatctagactttatagtcttcaacacaggttcccaaaaggctaacctcttcggatcaccaccaatagaa 3544248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 50 - 440
Target Start/End: Complemental strand, 1248123 - 1247733
Alignment:
Q  50 cctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctcca 149  Q
    ||||||||| |||||| || |||||||||| || | ||||||| |||| |||||||||||||||||||||||||| | ||| ||||| || ||||| |||    
T  1248123 cctataccaaaaaccacctttatccaccaatatacaccaacactatttacctaacaaagcactattaaactcccttaactgcctcacccctaacccccca 1248024  T
Q  150 tactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatga 249  Q
    ||||||||| |||||||||||||| ||||||||| ||| ||||||||| |||||||||||| ||||||||       |||||||||||||||||||||||    
T  1248023 tactccttttgtaaacaaacagagctccaagcgatccatgaaattttcttgttatcctcacgccctccccaaatttttttattaaaaatagattcaatga 1247924  T
Q  250 cagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagag 349  Q
    ||||||||||||| |||| ||||||||| |||||||| ||||||||| | || ||||||| ||||||||||||||||||||||||  |  ||||||||||    
T  1247923 cagagattatacccgacgaagctttgaaaaaggaaagagcatagacatgtaacgaggtcaggacagacttgagaagaaccaaccgggctccaaaagagag 1247824  T
Q  350 aaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggctaacctcttcggatcaccaccaatagaa 440  Q
    |||||||||||||||||| |||| ||||||||| || |||||||||||| |||||||||||||||||||   | |||||||||||||||||    
T  1247823 aaagcgactttgccaccccgatagtctagacttaatggttttcaacacaggttcccaaaaggctaaccttcgcagatcaccaccaatagaa 1247733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 48 - 439
Target Start/End: Original strand, 20987756 - 20988146
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||| ||| || || ||||||||||||||||||| ||| ||||||||||||||||| ||| ||||||| ||||||| ||| || || |||| ||| |    
T  20987756 accctatgccataacccttctctatccaccaacatcctccagcaccatttccctaacaacgcagtattaaattccctcaactgcctaacccccagcccac 20987855  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    || ||||||| |||||||| | |||| ||||||| |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  20987856 caaactccttacgtaaacagatagagctccaagcaacccaggaaattttcctgttatcctcactccctccccaaaaaaatttattaaaaatagattcaat 20987955  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagag 347  Q
    || |||||| |||| |||||||||||||||||||||||| ||||||||||| |  ||||||| |||| ||||||||||||||||||||||| | || |||    
T  20987956 gatagagatgatacatgacggagctttgaagaaggaaagagcatagacaggtagcgaggtcaggacacacttgagaagaaccaaccgaccc-cgaaggag 20988054  T
Q  348 agaaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggctaacctcttcggatcaccaccaataga 439  Q
    ||||| | ||||| |||||| || ||||||||||||||| | | || || | | ||||| || |||||||   |||||| ||||||||||||    
T  20988055 agaaaacaacttttccaccccgacaatctagactttataatatgcaccatatgatcccagaatgctaaccggctcggattaccaccaataga 20988146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 48 - 406
Target Start/End: Complemental strand, 13867372 - 13867021
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||  || ||  ||||| ||||| ||||    
T  13867372 accctataccataaaccacctctatccaccaacatccgccaacaccatttacctaacaaagcactattaaattcctgcaacttcctcacccccaaacctc 13867273  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    |||||       |||| ||||| ||| || |||| ||||||||||||||||||||||||||||||||||||          |||||||||||||||||||    
T  13867272 catac-------gtaagcaaaccgagctctaagcaacccaggaaattttcctgttatcctcactccctcccaaaaaaaaaatattaaaaatagattcaat 13867180  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagag 347  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||||  |||| ||||||||| ||||| |||||||||||  ||||||||    
T  13867179 gacagagattatacctgacggagccttgaagaaggaaagagcatatacaggtaatgcagtcaggacagacttaagaaggaccaaccgacctccaaaagag 13867080  T
Q  348 agaaagcgactttgccaccctgataatctagactttatagttttcaacacaagttccca 406  Q
    ||||| |||||||| |||||  | | |||||| || || |||||||||||| |||||||    
T  13867079 agaaaacgactttgtcaccccaacagtctagatttaattgttttcaacacaggttccca 13867021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 47 - 419
Target Start/End: Original strand, 5809181 - 5809553
Alignment:
Q  47 aaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccct 146  Q
    |||||||||||| |  ||| || | |||||||||||||||||||||||| | ||||||||||| |||||||| |||  || ||  ||||| ||||||| |    
T  5809181 aaccctataccagagcccacctttgtccaccaacatccgccaacaccatgtacctaacaaagcgctattaaattcctgcaacttcctcacccccaaccgt 5809280  T
Q  147 ccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaa 246  Q
    | ||||||||| |||||||||||| || ||||||  | ||||||||||||||| ||||||||| |||||||||       ||||||||||||||||| ||    
T  5809281 ctatactccttacgtaaacaaacaaagctccaagaaaaccaggaaattttcctattatcctcattccctccccaattttttttattaaaaatagatttaa 5809380  T
Q  247 tgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaaga 346  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||| || | ||||| ||||||||| ||||| |||||| ||||| || ||||    
T  5809381 tgacaaagattatacctgacggagctttgaagaaggaaagagcatagacaggtaacgcggtcaggacagacttaagaaggaccaactgacccccataaga 5809480  T
Q  347 gagaaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggctaacctc 419  Q
    || ||| | ||||||||||||||| |||||||  || || |  || |||||| ||||||| || |||||||||    
T  5809481 gaaaaaacaactttgccaccctgacaatctagttttaatggcctttaacacaggttcccagaatgctaacctc 5809553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 358
Target Start/End: Complemental strand, 32352896 - 32352541
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  32352896 ccccaacctccaacctgccacctaattcgccatacctagcgactaaaaccctataccacaaaccacctctatccaccaacatccgccaacaccattttcc 32352797  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    |||||||||   |||||||||| |||  |  ||||| ||||| || ||||||||||||  |||||||||||  | ||||   | ||| |||||||||||     
T  32352796 taacaaagctaaattaaactccttcaatttcctcacccccaaaccgccatactccttttttaaacaaacagtttgccaacttaaccaagaaattttccta 32352697  T
Q  201 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    |||||||||||||  ||||         || |||| | ||| |||||    |||||||||||||  |||||||||||||||||||| |||||||||||||    
T  32352696 ttatcctcactcc--cccccaaaaaaaataataaacaaagaatcaatagaggagattatacctgctggagctttgaagaaggaaagtgcatagacaggca 32352599  T
Q  301 atgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgact 358  Q
      |||||||||||||| ||||| |||||||| |||||  ||||||||||||| |||||    
T  32352598 gagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaaaccgact 32352541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 52 - 255
Target Start/End: Original strand, 45795880 - 45796083
Alignment:
Q  52 tataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccata 151  Q
    ||||||| |||||| || |||||||||||||||||||||||||||| |||||||||||||||||||| |||  || ||  ||||| ||||||||||||||    
T  45795880 tataccataaaccacctttatccaccaacatccgccaacaccatttacctaacaaagcactattaaattcctgcaacttcctcacccccaaccctccata 45795979  T
Q  152 ctcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgaca 251  Q
    |||||| ||||||||||||||| ||||||| |||||  ||| |||||||||||||||||||||||||        |||||||||||||||||||||||||    
T  45795980 ctccttacgtaaacaaacagagctccaagcaacccaaaaaaatttcctgttatcctcactccctccctaaaaaaatttattaaaaatagattcaatgaca 45796079  T
Q  252 gaga 255  Q
    ||||    
T  45796080 gaga 45796083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 358
Target Start/End: Complemental strand, 48073017 - 48072655
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| ||||||||||||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  48073017 ccccaacctccaacctgccacctaattcgccatacctgtcgactaaaacccgataccacaaaccacctctatccaccaacatccgccaacaccattttcc 48072918  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    |||||||||   |||||||||| |||  |  | |||  |||| || ||| ||||||||  |||||||||||  | ||||   | ||| |||||||||||     
T  48072917 taacaaagctaaattaaactccttcaatttccgcacctccaaaccgccacactccttttttaaacaaacagtttgccaacttaaccaagaaattttccta 48072818  T
Q  201 ttatcctcactccctccc-----cnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagac 295  Q
    |||| ||||||||| |||     |        ||| |||| | ||| |||||    |||||||||||||  |||||||||||||||||||| ||||||||    
T  48072817 ttatactcactccccccccccctcaaaaaaaattaataaacaaagaatcaatagaggagattatacctgctggagctttgaagaaggaaagcgcatagac 48072718  T
Q  296 aggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgact 358  Q
    |||||  |||||||||||||| ||||| |||||||| |||||  ||||||||||||| |||||    
T  48072717 aggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaaaccgact 48072655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 53 - 367
Target Start/End: Complemental strand, 19014518 - 19014203
Alignment:
Q  53 ataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatac 152  Q
    |||||| || ||| |||| ||||||||||||||||||| |||||| |||| ||||||   |||||||||||||| |||||| || ||||||  ||||  |    
T  19014518 ataccaaaacccacctctgtccaccaacatccgccaactccatttacctagcaaagctaaattaaactccctcaactgtctaacccccaacattccaccc 19014419  T
Q  153 tcctttcgtaaa-caaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgaca 251  Q
    |||||  ||||| |||| |||| ||||||| | |||| |||||||| |||||||||||||||||||||       ||  ||||||||||||||||||  |    
T  19014418 tccttcggtaaaacaaatagagctccaagcaatccagtaaattttcatgttatcctcactccctccccaaaaaaattgtttaaaaatagattcaatggaa 19014319  T
Q  252 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaa 351  Q
    ||||||||| ||||| ||||||||||||||||||| ||||||||| | |   ||||||||||| |||||||||  |||||||| ||| ||||||| ||||    
T  19014318 gagattatatctgacagagctttgaagaaggaaagagcatagacaagaagccaggtcaagacaaacttgagaaagaccaaccggcccccaaaagatagaa 19014219  T
Q  352 agcgactttgccaccc 367  Q
    || |||| ||||||||    
T  19014218 agtgactatgccaccc 19014203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 386
Target Start/End: Complemental strand, 25504580 - 25504193
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| | ||  |  |||||||| | ||| |||||||| |||||||| |||||| | |||||||| ||||||| |||||||||||||||    
T  25504580 ccccaacctccaacctcccacacacctcgccataacgggcgactaaaactctataccaaaaaccacccctatccactaacatcctccaacaccatttccc 25504481  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    ||  || ||| ||||||||||| ||| |||||| || || ||||||||| |||||||  | | |||||||||| ||||| | | ||| || ||||||||     
T  25504480 tagtaaggcaatattaaactccatcaactgtctaacccctaaccctccaaactccttctggagacaaacagagctccaacctatccaagatattttccta 25504381  T
Q  201 ttatcctcactccctcccc--nnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    | |||||||||||  ||||          |||||||| | |||||||| |  |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  25504380 tgatcctcactcctaccccaaaaaaaaaattattaaataaagattcaagggtagagattatacctgacggagctttgaagaaagaaagagcatagacagg 25504281  T
Q  299 caatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctagactttata 386  Q
     |  |||||||| ||||| |||||||||||||| || ||  |||||||||| || ||||| | ||| ||||| | |||||| ||||||    
T  25504280 aagagaggtcaacacagatttgagaagaaccaaacggccaccaaaagagaggaaacgactattccaacctgacagtctagattttata 25504193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 45 - 327
Target Start/End: Complemental strand, 40563100 - 40562818
Alignment:
Q  45 aaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaacc 144  Q
    ||||| ||||||||||| || ||||||||||||||||||| ||||||| | || |||||||| ||| |||| || ||| ||| ||  ||||| || ||||    
T  40563100 aaaactctataccacaacccgtctctatccaccaacatcctccaacacaacttgcctaacaaggcaatattgaattccttcaactacctcacccctaacc 40563001  T
Q  145 ctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattc 244  Q
    |||||| ||||||| | | ||||| |||| ||||||| |  |||||||||||||||||| |||||| |||| |||       ||| ||||||||||||||    
T  40563000 ctccatcctccttttgaagacaaatagagctccaagcaattcaggaaattttcctgttaacctcacaccctgcccaaaaaattttgttaaaaatagattc 40562901  T
Q  245 aatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 327  Q
    ||||| ||| || ||||||||| |||||||||| || ||||| ||||||||||| |  ||||||| |||| |||| |||||||    
T  40562900 aatgagagaaatgatacctgacagagctttgaaaaaagaaagcgcatagacaggaaccgaggtcaggacaaactttagaagaa 40562818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 144 - 415
Target Start/End: Original strand, 28358586 - 28358859
Alignment:
Q  144 cctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttatta--aaaataga 241  Q
    |||||| |||||||   |||||| |||||| ||||||| | |||| ||||||| ||||||||||||||||||||||       ||| ||   ||||||||    
T  28358586 cctccaaactccttatttaaacacacagagctccaagcaatccagaaaatttttctgttatcctcactccctccccaatattttttttttttaaaataga 28358685  T
Q  242 ttcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctca 341  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||| | |  || || | |||| |||| ||||||| ||| |||||| |     
T  28358686 ttcaatgagagagattatacctgacggagctttgaagaaggaaagagcatagacatgaagcgatgttaggacaaacttaagaagaatcaagcgacccccg 28358785  T
Q  342 aaagagagaaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggctaa 415  Q
    || || ||||| |||||||||||||| ||||||||||| || |||||   || |||| |||||||||| |||||    
T  28358786 aaggatagaaaacgactttgccaccccgataatctagatttaatagtagacaccacatgttcccaaaaagctaa 28358859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 30 - 277
Target Start/End: Original strand, 38070415 - 38070661
Alignment:
Q  30 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagct 129  Q
    |||||||| || || ||||| ||||||||||| ||  ||||||||||||||| ||||||||||||||| | ||| ||| || ||||||| ||  ||| ||    
T  38070415 ccataccttgccaccaaaactctataccacaaccctcctctatccaccaacaaccgccaacaccattttcttaataaaacaatattaaattcattcaact 38070514  T
Q  130 gtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnnttt 229  Q
    ||||||| || ||||| ||||  ||||| ||||||||||||| | ||||||||| ||| ||||||||||||||||||||||||||||||        |||    
T  38070515 gtctcaccccaaaccc-ccatcttccttacgtaaacaaacagtgctccaagcgatccatgaaattttcctgttatcctcactccctccctaattttgttt 38070613  T
Q  230 attaaaaatagattcaatgacagagattatacctgacggagctttgaa 277  Q
     || ||| |||| | ||||  |||||||||| ||||||||||||||||    
T  38070614 tttcaaagtagagttaatggaagagattatatctgacggagctttgaa 38070661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 48 - 201
Target Start/End: Original strand, 52692072 - 52692225
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| || || ||||||||||||||||||| |||||||||||| ||||| ||||||| |||||| ||||| |  || |||||||| || ||||    
T  52692072 accctataccagaacccctctctatccaccaacatcctccaacaccattttcctaataaagcacaattaaattcccttaattgcctcactcctaatcctc 52692171  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgt 201  Q
    || |||||||||||| |||||| ||| ||||||| |  ||||||||||||||||    
T  52692172 caaactcctttcgtagacaaaccgagctccaagcaattcaggaaattttcctgt 52692225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 30077601 - 30077669
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30077601 gggtcaagatcctctccatttataaattttttcatttattgcaatttggagagagatagacacaaaaaa 30077669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 252 - 358
Target Start/End: Original strand, 5497891 - 5497997
Alignment:
Q  252 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaa 351  Q
    |||||||||||||| |||||||||||||||||||  |||||||||||||| ||||||| |||||| |||||||||||||| |||||  ||||||| ||||    
T  5497891 gagattatacctgatggagctttgaagaaggaaattgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaa 5497990  T
Q  352 agcgact 358  Q
    | |||||    
T  5497991 accgact 5497997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 18107278 - 18107346
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18107278 gggtaaagatcctctccatttataacttttttcatttgttgcaatttggagagagatagacacaaaaaa 18107346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 52279996 - 52280064
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  52279996 gggttaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacataaaaaa 52280064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 227 - 379
Target Start/End: Original strand, 6051383 - 6051535
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    ||||||||| | ||||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||| |  |  |||| ||||||||| ||||||    
T  6051383 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 6051482  T
Q  327 accaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctaga 379  Q
    | ||| |||||  | ||||| || || ||||||||||| || || ||||||||    
T  6051483 atcaaacgaccaccgaaagataggaaccgactttgccaaccagacaatctaga 6051535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 6948787 - 6948855
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  6948787 gggtaaagatcctctccatttataatttttttcatttgttgcaatttggagagagatagacaaaaaaaa 6948855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 446 - 509
Target Start/End: Complemental strand, 36004941 - 36004878
Alignment:
Q  446 aagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  36004941 aagatcctctccatttataacttttttcatttgttgcaatttggagagagatagacaaaaaaaa 36004878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 37531120 - 37531205
Alignment:
Q  10 ccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccat 95  Q
    ||||||||| |||||| |||||||||||| |||||||||||||||||||||| ||| |||| || |||||||||||||||| ||||    
T  37531120 ccaacctgccacctaactcgccatacctgacaactaaaaccctataccacaacccacctctgtctaccaacatccgccaacgccat 37531205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 39430831 - 39430956
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| | ||| |  |||||||| | ||| |||| ||| ||||||||||| ||  ||||||| |||||||||| ||||||||| || ||    
T  39430831 ccccaacctccaacctcccaccaacctcgccataacgggcgactagaacactataccacaaccctactctatctaccaacatcctccaacaccacttacc 39430930  T
Q  101 taacaaagcactattaaactccctca 126  Q
    ||||||||||| ||||||||||||||    
T  39430931 taacaaagcacaattaaactccctca 39430956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 233 - 334
Target Start/End: Original strand, 45271027 - 45271128
Alignment:
Q  233 aaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaac 332  Q
    ||||||||| |||| |  ||| ||||||||||||||||| |||||||||||||| ||||||||||| |  ||||||||||||||||| || |||||||||    
T  45271027 aaaaatagaatcaagggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggaagagaggtcaagacagacttaaggagaaccaac 45271126  T
Q  333 cg 334  Q
    ||    
T  45271127 cg 45271128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 304
Target Start/End: Original strand, 48434867 - 48435007
Alignment:
Q  164 acaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacct 263  Q
    ||||| |||||||||| | ||||| | |||||||||| ||||||||||||| ||||        ||| ||| |||||||||||||  |||||||||||||    
T  48434867 acaaatagagttccaatcaacccacgcaattttcctggtatcctcactcccaccccaaaaaaaattaataagaatagattcaatggaagagattatacct 48434966  T
Q  264 gacggagctttgaagaaggaaagggcatagacaggcaatga 304  Q
    |  ||||||||||| |||||||| || ||||||||||||||    
T  48434967 gcgggagctttgaaaaaggaaagagcgtagacaggcaatga 48435007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 7396298 - 7396152
Alignment:
Q  11 caacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagca 110  Q
    |||||| | ||||| ||||||||| | ||| |||||||| ||||| || |||||| |  |||| |||||||||| |||||||||  | ||||| ||||||    
T  7396298 caacctcccacctacttcgccatagcgggcgactaaaactctatatcaaaaaccacccatatcaaccaacatcctccaacaccacatgcctaaaaaagca 7396199  T
Q  111 ctattaaactccctcagctgtctcactcccaaccctccatactcctt 157  Q
      |||||||||||||| |||||| || | ||||||||||||||||||    
T  7396198 taattaaactccctcaactgtctaaccctcaaccctccatactcctt 7396152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 251 - 319
Target Start/End: Complemental strand, 7396056 - 7395988
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 319  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||| ||| |||||||||||||||||    
T  7396056 agagattatacctgatggagctttgaagaaggaaagatcatagacagacaaagaggtcaagacagactt 7395988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 444 - 504
Target Start/End: Complemental strand, 18107457 - 18107397
Alignment:
Q  444 tcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    |||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  18107457 tcaagatcctctccatttataactttttccatttgttacaatttggagagagatagacaca 18107397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 28097552 - 28097396
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| | ||||| ||||||||| | ||| |||||||| | |||||||||| ||   ||||| || | ||| | ||||||||| || ||    
T  28097552 ccccaacctccaacctcccacctacttcgccataacgggcgactaaaactcgataccacaaatcactactatcaacaagcatactccaacaccactttcc 28097453  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctt 157  Q
    |||||||||   |||||||||| ||| ||||||||| ||||| |||||| |||||||    
T  28097452 taacaaagcctgattaaactccttcaactgtctcacccccaaacctccaaactcctt 28097396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 251 - 330
Target Start/End: Original strand, 26721437 - 26721516
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 330  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||  ||||||| |||| |||| | ||||||||    
T  26721437 agagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcaggacaaactttaaaagaacca 26721516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 227 - 298
Target Start/End: Original strand, 35541814 - 35541885
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||| | ||||||||||  ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  35541814 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 35541885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 444 - 504
Target Start/End: Complemental strand, 6948967 - 6948907
Alignment:
Q  444 tcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    ||||||| ||||| |||||||| |||||||||||||||||||||| |||||||||||||||    
T  6948967 tcaagattctctctatttataacttttttcatttgttgcaatttgaagagagatagacaca 6948907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 17708862 - 17708930
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 319  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||  |||||||  ||||||||    
T  17708862 agagattatacctgatggagctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagactt 17708930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 33260036 - 33259961
Alignment:
Q  253 agattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 328  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||| |  ||| ||||||||||||| ||||||||    
T  33260036 agatgatacctgagggagctttgaagaaggaaagagcatagacagggagagagatcaagacagacttaagaagaac 33259961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 33280195 - 33280120
Alignment:
Q  253 agattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 328  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||| |  ||| ||||||||||||| ||||||||    
T  33280195 agatgatacctgagggagctttgaagaaggaaagagcatagacagggagagagatcaagacagacttaagaagaac 33280120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 49264550 - 49264251
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| |  || |  |||||||| | ||| |||| ||| ||| ||||||| ||  ||||||| |||||||||  |||||||||||| ||    
T  49264550 ccccaacctccaacctccctccaacctcgccataacgggcgactataacactacaccacaaccctactctatctaccaacatcttccaacaccatttacc 49264451  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    ||||||| ||   ||||||||||||| |   || || |||||||||||| |||||||| |  |||| | ||  |||||| | | ||| | ||||||||      
T  49264450 taacaaaacaaagttaaactccctcaacctcctaacccccaaccctccagactcctttggagaacacaaagtattccaacctatccaagtaattttccga 49264351  T
Q  201 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
       ||||||||||| ||||        ||||| || | ||||||||||  ||||||||||||||| |||||||| ||||| ||||| |||||||||||||    
T  49264350 cggtcctcactccc-ccccaaaaaaagttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaagaaagagcatagacaggca 49264252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 165 - 304
Target Start/End: Original strand, 32642589 - 32642728
Alignment:
Q  165 caaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctg 264  Q
    ||||| || |||||| | ||||| | ||||||||| |||||||||| ||||||||        ||| ||||||||||||| |||  ||||||||||||||    
T  32642589 caaacggaattccaatcaacccaagcaattttcctattatcctcaccccctccccaaaaaaaattaataaaaatagattcgatggaagagattatacctg 32642688  T
Q  265 acggagctttgaagaaggaaagggcatagacaggcaatga 304  Q
      |||||| |||| ||||| ||||| ||||||||||||||    
T  32642689 cgggagctctgaaaaaggatagggcgtagacaggcaatga 32642728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 440 - 509
Target Start/End: Original strand, 13615297 - 13615366
Alignment:
Q  440 agggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||| |||||||||| ||||||||| ||||| ||||||||||||||| |||| ||||||||||| ||||    
T  13615297 agggtaaagatcctctacatttataactttttccatttgttgcaattttgagaaagatagacacataaaa 13615366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 239 - 379
Target Start/End: Complemental strand, 47622425 - 47622285
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 338  Q
    ||||||||||  |||||||||| |||||||||||||||| |||||||| ||||||||||| |  |  |||| ||||||||| ||||| |  |  |||||     
T  47622425 agattcaatggaagagattatatctgacggagctttgaaaaaggaaagtgcatagacaggaagagcagtcaggacagactttagaaggattaggcgacca 47622326  T
Q  339 tcaaaagagagaaagcgactttgccaccctgataatctaga 379  Q
     ||||||||||||| |||||  |||| || || ||||||||    
T  47622325 ccaaaagagagaaaccgactacgccaaccagacaatctaga 47622285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 509
Target Start/End: Complemental strand, 20507664 - 20507601
Alignment:
Q  446 aagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||||| ||| ||||| ||||| ||||||||| |||||||||||||||||||||| ||||    
T  20507664 aagatcctctacatatataactttttccatttgttgtaatttggagagagatagacacataaaa 20507601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 20796237 - 20796336
Alignment:
Q  27 tcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||| | ||| |||| |||  |||||||||| ||  ||||||  |||||||||| |||||||||||| ||||||||||||  ||||||||||||||    
T  20796237 tcgccataacgggcgactagaacattataccacaaccctactctatttaccaacatcctccaacaccatttacctaacaaagcaaaattaaactccctca 20796336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 20796452 - 20796511
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||||  ||||||||||||||| |||||||| ||||||||||| |||||||||||    
T  20796452 agattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacagg 20796511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 27393506 - 27393367
Alignment:
Q  30 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagct 129  Q
    |||||||| ||||| || ||| ||||||| |||||  ||||||| ||||||| || ||||||||| || |||||||| |||  ||||||||||| || ||    
T  27393506 ccatacctagcaaccaacaccatataccataaacctcctctatcaaccaacaacctccaacaccactttcctaacaatgcaagattaaactcccgcaact 27393407  T
Q  130 gtctcactcccaaccctccatactcctttcgtaaacaaac 169  Q
      ||||| ||||| || | || ||||||| ||||||||||    
T  27393406 tcctcacccccaaaccacaatgctccttttgtaaacaaac 27393367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 228 - 298
Target Start/End: Original strand, 19042904 - 19042974
Alignment:
Q  228 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    |||||||| | ||||||||| | ||||||||||||||| ||||||  |||||||||||||||||| |||||    
T  19042904 ttattaaacaaagattcaataaaagagattatacctgatggagctcagaagaaggaaagggcataaacagg 19042974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 39431078 - 39431140
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 301  Q
    ||||||||||  ||||||||||||||| |||||||| || |||||||| ||||||||||||||    
T  39431078 agattcaatggaagagattatacctgatggagctttaaataaggaaagagcatagacaggcaa 39431140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 3074548 - 3074593
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagaca 296  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||    
T  3074548 agagattatacctgatggagctctgaagaaggaaagggcatagaca 3074593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 324
Target Start/End: Complemental strand, 5283212 - 5283140
Alignment:
Q  252 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaa 324  Q
    ||||| |||||||| ||||||||||||||||||||  |||||||  | |||||| ||||||||||||| ||||    
T  5283212 gagatgatacctgaaggagctttgaagaaggaaagatcatagactagtaatgagatcaagacagactttagaa 5283140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 31068803 - 31068727
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccct 124  Q
    |||||| |||| ||||  || ||||||||||||| |||||||||||| |||||||| ||||||  ||||||||||||    
T  31068803 accctaaaccataaactctccctatccaccaacaaccgccaacaccacttccctaataaagcaaaattaaactccct 31068727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 42475256 - 42475184
Alignment:
Q  229 tattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 301  Q
    |||||||||||||||||||    || |  |||||||||||||| |||||||||||||||||||| ||||||||    
T  42475256 tattaaaaatagattcaatagaggatacgatacctgacggagccttgaagaaggaaagggcataaacaggcaa 42475184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 44890076 - 44890123
Alignment:
Q  77 caacatccgccaacaccatttccctaacaaagcactattaaactccct 124  Q
    ||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  44890076 caacaaccgccaacaccacttccctaataaagcactattaaactccct 44890123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 10710539 - 10710482
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 309  Q
    ||||||||||||||| |||||||||||||||| ||| |||||||||| ||| |||||||    
T  10710539 agagattatacctgatggagctttgaagaagg-aagcgcatagacagacaaagaggtca 10710482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 11649769 - 11649831
Alignment:
Q  53 ataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactatt 115  Q
    |||||||||||||||  |||| |||||||||| ||||||||| |||||||||| |||| ||||    
T  11649769 ataccacaaaccatccttatcaaccaacatcctccaacaccacttccctaacagagcaatatt 11649831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 45270871 - 45270920
Alignment:
Q  77 caacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    ||||| ||||||||||||||| |||||||| ||| |||||||||||||||    
T  45270871 caacagccgccaacaccatttacctaacaatgcaatattaaactccctca 45270920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 13112821 - 13112754
Alignment:
Q  54 taccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactc 121  Q
    |||||||| || ||| | ||||||||||||| ||||||||||||||| ||||||| |  |||||||||    
T  13112821 taccacaacccctctttgtccaccaacatcctccaacaccatttccccaacaaagaaaaattaaactc 13112754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 43943813 - 43943750
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagaca 314  Q
    ||||||||||| ||  |||||| ||||||||||||||||||| ||||||| ||| | |||||||    
T  43943813 agagattatacatgcgggagctctgaagaaggaaagggcatatacaggcagtgaagacaagaca 43943750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 51799650 - 51799595
Alignment:
Q  69 ctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccct 124  Q
    ||||| ||||||| |||||||||||| ||||| || || |||||||||||||||||    
T  51799650 ctatcaaccaacaaccgccaacaccacttccccaataaggcactattaaactccct 51799595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 2654889 - 2654963
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 301  Q
    |||||||||||||||||||||    || || |||||||||||||||||||| || |||||  |||| ||||||||    
T  2654889 tttattaaaaatagattcaatagaggaaatgatacctgacggagctttgaaaaaagaaagaacataaacaggcaa 2654963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 330
Target Start/End: Complemental strand, 22191117 - 22191039
Alignment:
Q  252 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 330  Q
    |||||||||||||| || ||| ||||||||||||  ||||||||||| |  || | |||||||||||| || |||||||    
T  22191117 gagattatacctgatggtgctctgaagaaggaaaaagcatagacaggaagagaagacaagacagacttaaggagaacca 22191039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 509
Target Start/End: Complemental strand, 35078554 - 35078496
Alignment:
Q  452 ctctccatttataaattttttcatttgttgc-aatttggagagagatagacacaaaaaa 509  Q
    ||||| |||||||| |||||||||||||||| |||||  ||| ||||||||||||||||    
T  35078554 ctctctatttataacttttttcatttgttgcaaatttaaagaaagatagacacaaaaaa 35078496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 509
Target Start/End: Original strand, 36004789 - 36004851
Alignment:
Q  448 gatcctctccatttataaatttttt-catttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||  |||||||| |||||| ||||||||| |||||||||||||||| ||| ||||||    
T  36004789 gatcctctttatttataatttttttacatttgttgtaatttggagagagataaacaaaaaaaa 36004851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 379
Target Start/End: Original strand, 51052695 - 51052813
Alignment:
Q  261 cctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgacttt 360  Q
    |||| ||||||||||||||||||||| ||||||||||| |  |  |||| ||| ||||| || |||| ||| |||||  | ||||| || || |||||||    
T  51052695 cctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacggactttagtagaatcaaacgaccaccgaaagataggaaccgacttt 51052794  T
Q  361 gccaccctgataatctaga 379  Q
    |||| || || ||||||||    
T  51052795 gccaaccagacaatctaga 51052813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 26131897 - 26131946
Alignment:
Q  73 ccaccaacatccgccaacaccatttccctaacaaagcactattaaactcc 122  Q
    |||||||||||| |||||||||||| ||||||| ||||  ||||||||||    
T  26131897 ccaccaacatcctccaacaccatttacctaacagagcaacattaaactcc 26131946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 34352985 - 34353022
Alignment:
Q  81 atccgccaacaccatttccctaacaaagcactattaaa 118  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  34352985 atccaccaacaccatttacctaacaaagcactattaaa 34353022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 43944012 - 43943971
Alignment:
Q  53 ataccacaaaccatctctatccaccaacatccgccaacacca 94  Q
    ||||||||||||||||||||| || ||||||| |||||||||    
T  43944012 ataccacaaaccatctctatcaactaacatcctccaacacca 43943971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 16586552 - 16586500
Alignment:
Q  234 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaag 286  Q
    |||||||||||||| | ||| ||||||||||  ||||||||||| ||||||||    
T  16586552 aaaatagattcaataaaagaaattatacctgcaggagctttgaaaaaggaaag 16586500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 479 - 507
Target Start/End: Original strand, 18976299 - 18976327
Alignment:
Q  479 ttgcaatttggagagagatagacacaaaa 507  Q
    |||||||||||||||||||||||||||||    
T  18976299 ttgcaatttggagagagatagacacaaaa 18976327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 27889548 - 27889608
Alignment:
Q  270 gctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 330  Q
    |||||||||||||||| |||||| ||||| |  ||||||| ||||||||| || |||||||    
T  27889548 gctttgaagaaggaaatggcatacacaggaagcgaggtcaggacagacttaaggagaacca 27889608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 298
Target Start/End: Complemental strand, 30650348 - 30650308
Alignment:
Q  258 atacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    |||||| | |||||||||||||||||||| |||||||||||    
T  30650348 atacctaagggagctttgaagaaggaaagcgcatagacagg 30650308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 304; Significance: 1e-171; HSPs: 72)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 48 - 440
Target Start/End: Complemental strand, 14843676 - 14843284
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  14843676 accctataccaaaaaccatctctatctaccaacattcgccaacaccatttacctaacaaatcactattaaactccctcagctttctcactcccaaccctc 14843577  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||       |||||||||||||||||||||    
T  14843576 catactccttttgtaaacaaacagagttccaagcgacccaggaaattttccttttatcctcactccctccccaaaaaaatttattaaaaatagattcaat 14843477  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagag 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  14843476 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagtcttgagaagaatcaaccgacccccaaaagag 14843377  T
Q  348 agaaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggctaacctcttcggatcaccaccaatagaa 440  Q
    ||| ||| |||||||||||| |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14843376 agatagctactttgccaccccgataatctagactttatattcttcaacacaggttcccaaaaggctaacctcttcggatcaccaccaatagaa 14843284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 48 - 440
Target Start/End: Original strand, 25350823 - 25351216
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| || |||||||||||||||||||||| |||| ||||||| ||||| ||||||| |||||| ||| | |  |  ||||| ||||| ||||    
T  25350823 accctataccagaacccatctctatccaccaacatcctccaaaaccattttcctaataaagcacaattaaattcctttaatttcctcacacccaatcctc 25350922  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnnttt-attaaaaatagattcaa 246  Q
    || ||||||||||||||||||| ||| ||||||| | |||||||||||||||||||||||||||||||||||       ||| |||||||||||||||||    
T  25350923 caaactcctttcgtaaacaaactgagctccaagcaatccaggaaattttcctgttatcctcactccctccccaaattttttttattaaaaatagattcaa 25351022  T
Q  247 tgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaaga 346  Q
    ||| |||||||||||||||||||||||||||||||||||| ||||||||||| |  |||||||||||| |||| | ||| |||||||||||  || | ||    
T  25351023 tgatagagattatacctgacggagctttgaagaaggaaagagcatagacaggaagcgaggtcaagacaaactttaaaaggaccaaccgaccaccatagga 25351122  T
Q  347 gagaaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggctaacctcttcggatcaccaccaatagaa 440  Q
     ||||||||||| |||||||| || ||||| ||||| || || | ||||||| | ||||| || |||||||  ||||||| |||||||||||||    
T  25351123 tagaaagcgactctgccaccccgacaatctggacttaattgtatgcaacacaggatcccagaatgctaaccgattcggattaccaccaatagaa 25351216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 51 - 417
Target Start/End: Original strand, 26514328 - 26514695
Alignment:
Q  51 ctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccat 150  Q
    |||||||| || || ||||||||||||| ||||| ||||||||  |||||||| |||||||||||||| ||||| | ||||||||| |||||||||||||    
T  26514328 ctataccagaacccctctctatccaccagcatcctccaacacctattccctaataaagcactattaaattcccttatctgtctcacccccaaccctccat 26514427  T
Q  151 actcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctcccc-nnnnnnntttattaaaaatagattcaatga 249  Q
    |||||||||||||||| || ||| ||||||| | ||||||||||||||| |||||||||||||||||||        ||| |||||||||||||||||||    
T  26514428 actcctttcgtaaacatactgagctccaagcaatccaggaaattttcctattatcctcactccctccccaaaaaaattttgttaaaaatagattcaatga 26514527  T
Q  250 cagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagag 349  Q
     ||||| |||||||||| ||||||||||||| ||||| ||||||||||| |  ||||||||||| ||||| | ||| ||||| |||||  ||||||| ||    
T  26514528 tagagagtatacctgacagagctttgaagaaagaaagagcatagacaggaagcgaggtcaagaccgacttcaaaaggaccaaacgaccaccaaaagatag 26514627  T
Q  350 aaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggctaacc 417  Q
    ||||||||| |||||||| || |||| |||||||||| | | ||||||  | |||||||| |||||||    
T  26514628 aaagcgactatgccaccccgacaatcgagactttataatatgcaacactgggtcccaaaaagctaacc 26514695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 48 - 436
Target Start/End: Complemental strand, 14686547 - 14686159
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| || ||  ||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||  | |   ||||||||||| || |    
T  14686547 accctataccaaaatccgcctctatccaccaacatccgccaacaccatttacctaacaaagcgctattaaattcccgtaacctcctcactcccaaaccac 14686448  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    |||| ||||| |||||||||| ||||| |||||| | |||||| ||||||||||||||||||||||||||||        |||||||| |||||||||||    
T  14686447 catattccttacgtaaacaaatagagtgccaagcaatccaggagattttcctgttatcctcactccctccccaaaaaaaattattaaacatagattcaat 14686348  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagag 347  Q
    || ||||||||||||||||||||| |||||||||||||| ||||||||||| |||| || || |||||| || ||||| |||||||||||  || ||||     
T  14686347 gatagagattatacctgacggagccttgaagaaggaaagagcatagacaggtaatgcggacaggacagaattcagaaggaccaaccgacctccataagaa 14686248  T
Q  348 agaaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggctaacctcttcggatcaccaccaat 436  Q
    || || ||||||||||||||  | | |||||| || || |||||||||||| | |||||||| |||| || |   ||||||||||||||    
T  14686247 aggaaacgactttgccaccccaacagtctagatttaattgttttcaacacagggtcccaaaaagctatccgccgaggatcaccaccaat 14686159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 352
Target Start/End: Original strand, 15674383 - 15674737
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||    
T  15674383 ccccaacctccaacctgccacctaattcaccatatctggcgactaaaaccctataccacaaaccatctcggtccaccaacatccgccaacaccattttcc 15674482  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    |||||||||   |||||||||| |||  |  | ||| ||||| || ||||||||||||  |||||||||||  | |||    | ||| |||||||||||     
T  15674483 taacaaagctaaattaaactccttcaatttccgcacccccaaaccgccatactccttttttaaacaaacagtttgccagcttaaccaagaaattttccta 15674582  T
Q  201 ttatcctcact---ccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacag 297  Q
    |||||||||||   ||| ||||        ||| |||| | |||||||||    |||||||||||||  |||||||||||||||||||| ||||||||||    
T  15674583 ttatcctcactcccccccccccaaaaaaaattaataaataaagattcaatagaggagattatacctgctggagctttgaagaaggaaagtgcatagacag 15674682  T
Q  298 gcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaa 352  Q
    |||  |||||||||||||| ||||| |||||| | |||||  |||||||||||||    
T  15674683 gcagagaggtcaagacagatttgagtagaacccagcgaccaccaaaagagagaaa 15674737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 33640471 - 33640856
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| | ||  |  |||||||| | ||| |||||||| |||||||| |||||| | |||||||| ||||||| |||||||||||||||    
T  33640471 ccccaacctccaacctcccacacacctcgccataacgggcgactaaaactctataccaaaaaccacccctatccactaacatcctccaacaccatttccc 33640570  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    ||  || |||  |||||||||| ||| |||||| || || ||||||||| |||||||  | | |||||||||||||||| | | ||| || ||||||||     
T  33640571 tagtaaggcaacattaaactccttcaactgtctaacccctaaccctccaaactccttctggagacaaacagagttccaacctatccaagacattttccta 33640670  T
Q  201 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    | |||||||||||| ||||        |||||||| | |||||||| |  ||| |||||||| ||| ||||||||||||| ||||| |||||||||||||    
T  33640671 tgatcctcactcccaccccaaaaaaaattattaaataaagattcaagggtagaaattatacccgacagagctttgaagaaagaaagagcatagacaggca 33640770  T
Q  301 atgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctagactttata 386  Q
      |||||||| ||||| |||||||||||||| || ||  |||||||||| || ||||| | ||| ||||| | |||||||||||||    
T  33640771 gagaggtcaacacagatttgagaagaaccaaacggccaccaaaagagaggaaacgactattccaacctgacagtctagactttata 33640856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 48 - 367
Target Start/End: Original strand, 19350545 - 19350864
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| || ||| ||||||| | ||||| ||||||||||||||| || | ||||||   |||||| |||  || ||| ||||| ||||  ||||    
T  19350545 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcctgcaactgcctcacccccagacctc 19350644  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    || ||||||||   |||||||||||| || |||||| ||||||||||||||| ||||||||||| |||||||       ||||||||| | |||||||||    
T  19350645 caaactcctttttcaaacaaacagagctctaagcgatccaggaaattttcctattatcctcactacctccccaaaaaaatttattaaacaaagattcaat 19350744  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagag 347  Q
    || ||| ||||||||||||||||||||||||||||||||  |||||||||| |  ||  |||  |||||||| ||||||||||| |||||| | |||||     
T  19350745 gagagaaattatacctgacggagctttgaagaaggaaagtacatagacaggaagcgaactcagtacagacttaagaagaaccaaacgacccccgaaagat 19350844  T
Q  348 agaaagcgactttgccaccc 367  Q
    ||||| ||||||||||||||    
T  19350845 agaaaacgactttgccaccc 19350864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 27 - 331
Target Start/End: Complemental strand, 503092 - 502788
Alignment:
Q  27 tcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||| | ||| |||||||| ||||| || |||||| | |||||||| ||||||| |||||||||||||||||  || ||| ||||||||||| |||    
T  503092 tcgccataacgggcgactaaaactctatatcaaaaaccacccctatccactaacatcctccaacaccatttccctagtaaggcaatattaaactccttca 502993  T
Q  127 gctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnn 226  Q
     |||||| || || ||||||||| |||||||| ||| |||||||||| ||||| | | ||| || |||||||| | |||||||||||| ||||           
T  502992 actgtctaacccctaaccctccaaactccttttgtagacaaacagagctccaacctatccaagacattttcctatgatcctcactcccaccccaaaaaaa 502893  T
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
     |||||||| | |||||||| |  |||||||||||||||||||||||||||||| ||||| |||||||||||||  |||||||   |||| |||||||||    
T  502892 attattaaataaagattcaagggtagagattatacctgacggagctttgaagaaagaaagagcatagacaggcatagaggtcagcgcagatttgagaaga 502793  T
Q  327 accaa 331  Q
    |||||    
T  502792 accaa 502788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 48 - 418
Target Start/End: Original strand, 32186284 - 32186654
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| || ||| ||||||||||||||| | |||||||||||||  | ||||| ||   ||||||||| || | ||| ||||| |||| ||||     
T  32186284 accctataccaaaacccacctctatccaccaacaactgccaacaccatttatccaacaaggctaaattaaactctctaaactgcctcacccccagccctt 32186383  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    |||||||||| | |||||||| |||| ||||||| | ||||||||||||||||||||||||||||||||           || ||||| | || ||||||    
T  32186384 catactccttacctaaacaaatagagctccaagcaatccaggaaattttcctgttatcctcactccctctttaaaaaaaattcttaaataaagtttcaat 32186483  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagag 347  Q
    |  |||||||||| ||| ||||||||||||||| ||||| |  |||||||| |  ||||||| ||||||||| ||||||| ||| || ||| |||||||     
T  32186484 ggaagagattatatctgtcggagctttgaagaaagaaagagtgtagacaggaagcgaggtcaggacagacttaagaagaatcaagcggcccccaaaagat 32186583  T
Q  348 agaaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggctaacct 418  Q
    ||||||||||| ||||||  ||| | |||||| || |||||   || || | |||||||||||||||||||    
T  32186584 agaaagcgactctgccactttgacagtctagatttaatagtagacatcataggttcccaaaaggctaacct 32186654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 10 - 358
Target Start/End: Original strand, 26205904 - 26206244
Alignment:
Q  10 ccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagc 109  Q
    ||||||||| ||||||||||||||| ||||| ||||||||| |||||||||||||| ||||||| ||||| | ||||||||||||||||| |||||| |     
T  26205904 ccaacctgccacctaattcgccatatctggcgactaaaaccgtataccacaaaccacctctatcaaccaataaccgccaacaccatttccttaacaatgt 26206003  T
Q  110 actattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctca 209  Q
      ||||||||||| |||     ||||| ||||| || ||| ||||||||  |||||||||||  | ||||   | ||| ||||||||||| |||||||||    
T  26206004 tatattaaactccttcaatctcctcacccccaaaccgccacactccttttttaaacaaacagtttgccaacttaaccaagaaattttcctattatcctca 26206103  T
Q  210 ctccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 309  Q
    |                |||| |||| | |||||||||    |||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||    
T  26206104 ca--------aaaaaaatttaataaacaaagattcaatagaggagattatacctgatggagctttgaagaaggaaagtgcatagacaggcaaagaggtca 26206195  T
Q  310 agacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgact 358  Q
     |||||| |||||||||||||| |||||  ||||||| ||||| |||||    
T  26206196 ggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgact 26206244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 23347053 - 23346932
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||    
T  23347053 ccccaacctccaacctgccacctaattcgccatacctggcgactaaaaccctataccacaaaccacctctatccaccagcatccgccaacaccattttcc 23346954  T
Q  101 taacaaagcactattaaactcc 122  Q
    |||||||||   ||||||||||    
T  23346953 taacaaagctaaattaaactcc 23346932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 48 - 218
Target Start/End: Complemental strand, 29976547 - 29976377
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| || ||| ||||||| | ||||| |||||||| |||||| || | ||||||   |||||| |||| || ||| ||||| ||||  ||||    
T  29976547 accctataccaaaacccacctctatctatcaacaaccgccaacgccatttacccatcaaagctaaattaaattcccgcaactgcctcacccccagacctc 29976448  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccc 218  Q
    || ||||||||  ||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||    
T  29976447 caaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccc 29976377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 2142250 - 2142318
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2142250 gggttaagatcctctccatttataaatttttccatttgttgcaatttggagagagatagacacaaaaaa 2142318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 54 - 352
Target Start/End: Complemental strand, 13563469 - 13563165
Alignment:
Q  54 taccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatact 153  Q
    ||||| || ||| ||||||| || | ||||| ||| ||| | || |||| |||||||  ||||||||||||||| || ||||| ||||  || |||||||    
T  13563469 taccataacccacctctatcaactagcatcctccagcacaacttacctagcaaagcaagattaaactccctcagttgcctcacacccagacccccatact 13563370  T
Q  154 cctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnn-------tttattaaaaatagattcaa 246  Q
    |||||||  |||| | |  | ||||||||| |||||||||||||||||||| |||||| ||||||               ||| ||||||||| ||||||    
T  13563369 cctttcgagaacatatatcgctccaagcgatccaggaaattttcctgttattctcacttcctcccgaatttttatttttattttttaaaaata-attcaa 13563271  T
Q  247 tgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaaga 346  Q
    ||  | ||||||||||||||||||||||||| |||||||| |||||||||||||  ||||| | |||| | |||| || ||||||||| || || |||||    
T  13563270 tggaaaagattatacctgacggagctttgaaaaaggaaagagcatagacaggcagagaggttaggacaaatttgataaaaaccaaccggccttcgaaaga 13563171  T
Q  347 gagaaa 352  Q
    ||||||    
T  13563170 gagaaa 13563165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 24484997 - 24484929
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  24484997 gggtcaagatcctcttcatttataaatttttccgtttgttgcaatttggagagagatagacacaaaaaa 24484929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 439 - 509
Target Start/End: Original strand, 7098150 - 7098220
Alignment:
Q  439 aagggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  7098150 aagggtaaagatcctctccatttataactttttccatttgttgcaatttggagagagatagacaaaaaaaa 7098220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 227 - 360
Target Start/End: Original strand, 10362927 - 10363059
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    ||||||||||||||| ||||||  ||| ||||||  ||||||| | |||||||||||||| ||||||||||| |  ||||||||||||||||||||||||    
T  10362927 tttattaaaaatagaatcaatggaagaaattatat-tgacggaaccttgaagaaggaaagagcatagacaggtagagaggtcaagacagacttgagaaga 10363025  T
Q  327 accaaccgaccctcaaaagagagaaagcgacttt 360  Q
    || || |||||  |||| || ||||| |||||||    
T  10363026 actaaacgaccaccaaacgacagaaaccgacttt 10363059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 13086093 - 13086250
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| |  || |  |||||||| | ||| |||| ||| ||||||||||||||  ||||||| |||||||||| |||||||||||| ||    
T  13086093 ccccaacctccaacctccctccaacctcgccataacgggcgactagaacactataccacaaacctactctatctaccaacatcctccaacaccatttacc 13086192  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactccttt 158  Q
    ||||||||||  |||||||||| ||| ||  || || ||||||||||||  |||||||    
T  13086193 taacaaagcaacattaaactccttcaacttcctaacccccaaccctccagcctccttt 13086250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 444 - 504
Target Start/End: Complemental strand, 7098331 - 7098271
Alignment:
Q  444 tcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  7098331 tcaagatcctctctatttataatttttttcatttgttgcaatttggagagagatagacaca 7098271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 33805334 - 33805482
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | ||||| ||||||||| | ||| ||||||||   ||||||||| || ||||||||||| ||||||| |||||||||||||||    
T  33805334 cccccacctccaacctcccacctatttcgccatagcgggcgactaaaacatgataccacaatccttctctatccactaacatcctccaacaccatttccc 33805433  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctcca 149  Q
    || ||| |||  |||||||||| ||| ||  || || ||||||||||||    
T  33805434 tagcaatgcaacattaaactccttcaacttcctgacccccaaccctcca 33805482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 325
Target Start/End: Original strand, 13938302 - 13938596
Alignment:
Q  30 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagct 129  Q
    |||||||| || ||||| ||||||  |||||| |||||||| || || |||| || |||||||||||| | |||||||||| | |||||||| ||||       
T  13938302 ccatacctagccactaacaccctacgccacaa-ccatctctctctactaacaacctccaacaccattttcttaacaaagcaatgttaaactctctcaatc 13938400  T
Q  130 gtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnnttt 229  Q
      || || |||| |||||| |||||||| |  ||||| | ||| ||||||   | ||| || ||||| || ||||||||||| || ||||       |||    
T  13938401 tcctaacacccatccctccgtactccttcctcaaacataaagaattccaactaatccacgatatttttcttttatcctcacttccccccccaaaaaattt 13938500  T
Q  230 attaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaag 325  Q
    ||| || | ||||||||||  ||||||||||||||||||||||||||| |||||||| ||||||| ||| | ||  |||| |||||| ||||||||    
T  13938501 atttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagataggaagtgcagtcaggacagatttgagaag 13938596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 48 - 297
Target Start/End: Complemental strand, 1104486 - 1104237
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||||||||||  |||||  || ||||  | |||||||||||| |||||||||||| | |||| |||||||| ||| || || || |||||||    
T  1104486 accctataccacaaaccacatctatttactaacaaactccaacaccatttacctaacaaagcagtgttaatctccctcatctgcctaaccccaaaccctc 1104387  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    || | ||||||| |  |||||||   |||||   || |||  ||||||| || || ||||||||||||||||        ||||| || | |||||||||    
T  1104386 cagaatcctttcctggacaaacatttttccagctgatccaaaaaattttgctattgtcctcactccctccccaaaaaaaattattcaataaagattcaat 1104287  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacag 297  Q
       ||||||| ||||| | |||||||||||||||||||| ||||||||||    
T  1104286 ataagagattgtacctaatggagctttgaagaaggaaagagcatagacag 1104237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 7507924 - 7507856
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| ||||    
T  7507924 gggttaagatcctctccatttataactttttccatttgttgcaatttgaagagagatagacacacaaaa 7507856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 69 - 386
Target Start/End: Complemental strand, 21629640 - 21629323
Alignment:
Q  69 ctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaa 168  Q
    ||||| || |||| |||||||||| ||||||| ||||||||| | |||||||| |||| |   || || |||||||||||||||||| | |  ||||| |    
T  21629640 ctatcaactaacagccgccaacacaatttccccaacaaagcaatgttaaactctctcaacctcctaacacccaaccctccatactccctcctcaaacaca 21629541  T
Q  169 cagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacgg 268  Q
     |||  ||||| | ||||| ||||| || || ||||||||||  || ||||        ||||| || |  ||||||||   ||||||||||||||||||    
T  21629540 aagaactccaaccaacccaagaaatctttcttttatcctcacaacccccccaaaaaaaattatttaacaaggattcaatagaagagattatacctgacgg 21629441  T
Q  269 agctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgactttgccaccct 368  Q
    ||||||||| |||||||| ||||||||||| |  |  ||||||||||| |||||||| | ||| |||||  |||| || ||  | | ||| ||||| ||     
T  21629440 agctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagatttgagaagtatcaagcgaccaccaaaggaaaggtacctactatgccaacca 21629341  T
Q  369 gataatctagactttata 386  Q
    || |||||||||||||||    
T  21629340 gacaatctagactttata 21629323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 319
Target Start/End: Complemental strand, 11060448 - 11060130
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| | ||||||||||||||| | ||||||||| || | |||||| || |||   ||||| || | ||||| ||||||||| || ||    
T  11060448 ccccaacctccaacctcccacctaattcgccataacgggcaactaagactcgataccaaaagccactcctatcaactagcatcctccaacaccacttacc 11060349  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    ||||||| |   |||||| ||  ||| | ||||||| ||||| |||||| ||||| |  | || || |||   | |||| | | ||| || ||||| ||     
T  11060348 taacaaaaccacattaaattctttcaaccgtctcacccccaaacctccaaactccctatgaaagcacacatcatgccaacctatccaagatatttttcta 11060249  T
Q  201 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    |  ||||||||| | ||||       |||| |||| | ||| ||||||  ||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  11060248 tggtcctcactctccccccaaaaaaatttaataaataaagaatcaatggaagagattatacctgatggaactttgaagaaggaaagcgcatagacaggca 11060149  T
Q  301 atgaggtcaagacagactt 319  Q
    |  |||||| |||||||||    
T  11060148 aaaaggtcaggacagactt 11060130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 319
Target Start/End: Complemental strand, 649409 - 649341
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 319  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||  |||||||  ||||||||    
T  649409 agagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcagaacagactt 649341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 7506791 - 7506859
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| ||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||||| ||||    
T  7506791 gggttaagatcctctctatttataactttttccatttattgcaatttggagagagatagacacacaaaa 7506859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 56 - 325
Target Start/End: Complemental strand, 17605865 - 17605596
Alignment:
Q  56 ccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcc 155  Q
    |||||||||  | ||||| || |||| || ||||||||||||||| ||||||||| | |||||||| |||| |   || || ||||||||||||||||||    
T  17605865 ccacaaacctcccctatcaactaacagccaccaacaccatttccccaacaaagcaatgttaaactctctcaacctcctaacacccaaccctccatactcc 17605766  T
Q  156 tttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagaga 255  Q
     | |  ||||| | |||  ||||| | ||||| ||||| || || ||||| ||||  || ||||        ||||| || | |||||||||   |||||    
T  17605765 ctcctcaaacacaaagaactccaaccaacccaagaaatctttcttttatcatcacaacccccccaaaaaaaattatttaacaaagattcaatagaagaga 17605666  T
Q  256 ttatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaag 325  Q
    |||||||||| ||||||||||| |||||||| ||||||||||| |  |  ||||||||||| ||||||||    
T  17605665 ttatacctgatggagctttgaaaaaggaaagcgcatagacaggaagcgcagtcaagacagatttgagaag 17605596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 19256194 - 19256326
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| | ||  |  |||||||| | ||| |||||||| |||||||| |||||| | |||||||| ||||||| |||||||||||||||    
T  19256194 ccccaacctccaacctcccacacacctcgccataacgggcgactaaaactctataccaaaaaccacccctatccactaacatcctccaacaccatttccc 19256293  T
Q  101 taacaaagcactattaaactccctcagctgtct 133  Q
    ||  || |||  |||||||||| ||| ||||||    
T  19256294 tagtaatgcaacattaaactccttcaactgtct 19256326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 227 - 298
Target Start/End: Original strand, 2554385 - 2554456
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||| | ||||||||||  |||||||||||| |||||||||||||| |||||||| |||||||||||    
T  2554385 tttattaaacaaagattcaatggaagagattatacccgacggagctttgaaaaaggaaagtgcatagacagg 2554456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 450 - 504
Target Start/End: Original strand, 7507758 - 7507812
Alignment:
Q  450 tcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||    
T  7507758 tcctctccatttataactttttccatttgttgcaatttagagagagatagacaca 7507812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 13086335 - 13086397
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 301  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||| ||||| ||||||||    
T  13086335 agattcaatgaaagagattatacctgatggagctttaaagaaggaaagagcataaacaggcaa 13086397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 440 - 509
Target Start/End: Complemental strand, 7545757 - 7545688
Alignment:
Q  440 agggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||| || ||| ||||||||||||| |||||  |||||||||||||||||||||||||||||| |||||    
T  7545757 agggtaaaaatcatctccatttataactttttctatttgttgcaatttggagagagatagacaccaaaaa 7545688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 336
Target Start/End: Complemental strand, 17577077 - 17576968
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    ||||||||| | |||||||||   ||||||||||||||||||||||||||| |||||||| | ||||||||| |  |  ||||||||||| ||||| |||    
T  17577077 tttattaaacaaagattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgaatagacaggaagcgcagtcaagacagatttgagcaga 17576978  T
Q  327 accaaccgac 336  Q
    | ||| ||||    
T  17576977 atcaagcgac 17576968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 441 - 498
Target Start/End: Original strand, 32737705 - 32737762
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagata 498  Q
    |||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||    
T  32737705 gggtaaagatcctctcgatttataactttttccatttgttgcaatttggagagagata 32737762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 189 - 298
Target Start/End: Complemental strand, 18681972 - 18681863
Alignment:
Q  189 gaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaaggg 288  Q
    |||||||| || |||||||||||||||||||       |||||| || | ||||||||||  |||||||||||| || ||||||||||| |||||||| |    
T  18681972 gaaatttttcttttatcctcactccctccccaaaaaaatttatttaacaaagattcaatgggagagattatacccgatggagctttgaaaaaggaaagag 18681873  T
Q  289 catagacagg 298  Q
    | ||||||||    
T  18681872 cgtagacagg 18681863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 189 - 298
Target Start/End: Complemental strand, 24766812 - 24766703
Alignment:
Q  189 gaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaaggg 288  Q
    |||||||| || |||||||||| | ||||||       |||||| || | ||||| ||||  ||||||||||||||||||||||||||| |||||||| |    
T  24766812 gaaatttttcttttatcctcaccctctccccaaaaaaatttatttaacaaagatttaatggaagagattatacctgacggagctttgaaaaaggaaagtg 24766713  T
Q  289 catagacagg 298  Q
    ||||||||||    
T  24766712 catagacagg 24766703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 34600891 - 34600943
Alignment:
Q  72 tccaccaacatccgccaacaccatttccctaacaaagcactattaaactccct 124  Q
    ||||||||||||||||||||||| |||| |||||| |||||||||||||||||    
T  34600891 tccaccaacatccgccaacaccacttccttaacaacgcactattaaactccct 34600943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 34627436 - 34627488
Alignment:
Q  72 tccaccaacatccgccaacaccatttccctaacaaagcactattaaactccct 124  Q
    ||||||||||||||||||||||| |||| |||||| |||||||||||||||||    
T  34627436 tccaccaacatccgccaacaccacttccttaacaacgcactattaaactccct 34627488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 34722168 - 34722220
Alignment:
Q  72 tccaccaacatccgccaacaccatttccctaacaaagcactattaaactccct 124  Q
    ||||||||||||||||||||||| |||| |||||| |||||||||||||||||    
T  34722168 tccaccaacatccgccaacaccacttccttaacaacgcactattaaactccct 34722220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 25318414 - 25318493
Alignment:
Q  14 cctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacacc 93  Q
    ||||||||||||||||||||| ||||| || |||||| |||||||||||||  ||||||| ||||| | ||||| |||||    
T  25318414 cctgcgacctaattcgccatatctggcgacaaaaaccgtataccacaaaccccctctatcaaccaaaaaccgcccacacc 25318493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 34434888 - 34434939
Alignment:
Q  75 accaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  34434888 accaacatccgccaacaccatttacctaacaatgcaatattaaactccctca 34434939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 4478550 - 4478641
Alignment:
Q  6 acctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccattt 97  Q
    ||||||||||| | ||||| ||||||||| | ||| ||||||||   ||||||||| || || |||||||| ||||||| ||||||||||||    
T  4478550 acctccaacctcccacctacttcgccataacgggcgactaaaacatgataccacaacccttccctatccactaacatcctccaacaccattt 4478641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 17713030 - 17712882
Alignment:
Q  152 ctcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgaca 251  Q
    |||||| | ||||||||||||||||||| | ||||| | ||||||||| |||||||||| ||| ||||        ||| ||| ||||||||| |||  |    
T  17713030 ctccttacttaaacaaacagagttccaatcaacccaagcaattttcctattatcctcacccccaccccaaaaaaaattaataagaatagattcgatggaa 17712931  T
Q  252 gagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    ||||||||| |||  |||||| |||| ||| | ||||| ||||||||||    
T  17712930 gagattataactgtgggagctctgaaaaagaatagggcgtagacaggca 17712882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 17078403 - 17078357
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacag 297  Q
    ||||||||||||||| |||||||||||||||||||| ||||| ||||    
T  17078403 agagattatacctgatggagctttgaagaaggaaagcgcataaacag 17078357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 19616232 - 19616166
Alignment:
Q  234 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    |||||||||||||||  ||||||||||||||  |||||| | || || |||||||||||||||||||    
T  19616232 aaaatagattcaatggaagagattatacctgcaggagctctaaaaaaagaaagggcatagacaggca 19616166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 23065632 - 23065478
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | ||||| ||||||||| | ||| ||||||||   |||||||||||| |||||||| || |||| || | |||||||||| ||    
T  23065632 cccccacctccaacctcccacctacttcgccataacgggcgactaaaacatgataccacaaaccttctctatcaactaacaacctctaacaccatttacc 23065533  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcc 155  Q
    ||  ||| ||  |||||||||| ||| || ||| || || || ||||||| ||||    
T  23065532 tagtaaatcaacattaaactccttcaactttctaaccccgaaacctccatgctcc 23065478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 352
Target Start/End: Original strand, 2923634 - 2923735
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagaga 350  Q
    ||||||||||||||||||| |||||||||||||||   ||||||||  ||| || | |||| ||||||| || |||||||  |||||  ||||||| |||    
T  2923634 agagattatacctgacggaactttgaagaaggaaaaaacatagacaaacaaggaagacaaggcagactttaggagaaccaggcgaccaccaaaagaaaga 2923733  T
Q  351 aa 352  Q
    ||    
T  2923734 aa 2923735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 21549402 - 21549523
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | | ||| ||||||||| | ||| ||||||| |  ||| ||||| || | |||||| || ||||||| |||||||||||| ||    
T  21549402 cccccacctccaacctcccatctacttcgccataacgggcgactaaaatctgatatcacaacccttatctatcaactaacatcctccaacaccatttacc 21549501  T
Q  101 taacaaagcactattaaactcc 122  Q
    ||  |||||| |||||||||||    
T  21549502 tagtaaagcaatattaaactcc 21549523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 21549639 - 21549696
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagaca 296  Q
    ||||||||||  ||||||||||||||  |||||||||||||| ||||| |||||||||    
T  21549639 agattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatagaca 21549696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 440 - 509
Target Start/End: Original strand, 24484805 - 24484873
Alignment:
Q  440 agggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||| ||||| |||||||||||||||||||||||||| | |||| |||||| | ||||||| ||||    
T  24484805 agggtcaatatcctatccatttataaattttttcatttgtt-ccatttagagagataaagacacataaaa 24484873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 33753522 - 33753458
Alignment:
Q  236 aatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    ||||||||| |||  ||||||||||||||  ||||||||||| ||||| ||||| ||||||||||    
T  33753522 aatagattcgatggaagagattatacctgcgggagctttgaaaaaggatagggcgtagacaggca 33753458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 1308020 - 1307917
Alignment:
Q  234 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 333  Q
    |||||||||||||||  ||||||||||||||  |||||| |||| || |||||| | |||||||||| ||| | || ||| ||||| || |||| ||| |    
T  1308020 aaaatagattcaatggaagagattatacctgctggagctctgaaaaaagaaaggacgtagacaggcagtgaagacaggacggacttaaggagaatcaagc 1307921  T
Q  334 gacc 337  Q
    ||||    
T  1307920 gacc 1307917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 509
Target Start/End: Original strand, 7545582 - 7545639
Alignment:
Q  455 tccatttataaatttttt---catttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||| ||||||   |||||||||||||||||||||||||||| | ||||||    
T  7545582 tccatttataatttttttttccatttgttgcaatttggagagagatagataaaaaaaa 7545639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 11469365 - 11469412
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaag 286  Q
    ||||||||||  |||||||| |||||| ||||||||||||||||||||    
T  11469365 agattcaatggaagagattaaacctgatggagctttgaagaaggaaag 11469412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 304
Target Start/End: Original strand, 32198012 - 32198059
Alignment:
Q  257 tatacctgacggagctttgaagaaggaaagggcatagacaggcaatga 304  Q
    ||||||||||||||||||||| || ||||| ||||| |||||||||||    
T  32198012 tatacctgacggagctttgaaaaaagaaagagcataaacaggcaatga 32198059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 5668346 - 5668400
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttcccta 102  Q
    |||||| ||||||||| |||  | ||||||||||||||||||||||| |||||||    
T  5668346 accctaaaccacaaactatccttctccaccaacatccgccaacaccacttcccta 5668400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 10576768 - 10576682
Alignment:
Q  69 ctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcc 155  Q
    ||||| || |||| |||||||||||||||||| |||||| || | |||||||| |||| |   || || ||||||||||||||||||    
T  10576768 ctatcaactaacagccgccaacaccatttccccaacaaaacaatgttaaactctctcaacctcctaacacccaaccctccatactcc 10576682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 11469128 - 11469242
Alignment:
Q  7 cctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaa 106  Q
    |||||||||| | |||||  || ||||| | ||| ||||| || | ||||||||| || ||| |||| |||||||||| |||||||||||| |||| |||    
T  11469128 cctccaacctcccacctacgtcaccatatcgggcgactaacacacgataccacaacccttctttatctaccaacatcctccaacaccatttacctagcaa 11469227  T
Q  107 agcactattaaactc 121  Q
     ||  ||||||||||    
T  11469228 tgctatattaaactc 11469242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 14372339 - 14372293
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaa 285  Q
    ||||||||||  |||||||||||||| |||||||||||| |||||||    
T  14372339 agattcaatggaagagattatacctggcggagctttgaaaaaggaaa 14372293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 24573864 - 24573934
Alignment:
Q  258 atacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 328  Q
    |||||| | |||||||||||||||||||| || |||| ||| |  |||||||||||| |||| ||||||||    
T  24573864 atacctaagggagctttgaagaaggaaagagcctagatagggagagaggtcaagacatacttaagaagaac 24573934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 12673479 - 12673406
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    |||||| |||| |||||| |||  |||||||||||  || ||| | |||||||||||||| |||||||||||||    
T  12673479 tttattcaaaagagattctatggaagagattatactagatggatcgttgaagaaggaaagagcatagacaggca 12673406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 12687277 - 12687244
Alignment:
Q  76 ccaacatccgccaacaccatttccctaacaaagc 109  Q
    ||||||||||||||||||| ||||||||||||||    
T  12687277 ccaacatccgccaacaccacttccctaacaaagc 12687244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 24573714 - 24573763
Alignment:
Q  45 aaaaccctataccacaaaccatctctatccaccaacatccgccaacacca 94  Q
    ||||| ||| |||||||||||||||||||||| | ||||| |||||||||    
T  24573714 aaaactctaaaccacaaaccatctctatccactaccatcctccaacacca 24573763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 10920021 - 10919957
Alignment:
Q  30 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacacca 94  Q
    |||||||| ||||| || ||||||||||| || ||  ||||||| |||||||||| |||||||||    
T  10920021 ccatacctagcaaccaacaccctataccaaaacccccctctatcaaccaacatcctccaacacca 10919957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 15161265 - 15161313
Alignment:
Q  70 tatccaccaacatccgccaacaccatttccctaacaaagcactattaaa 118  Q
    |||| |||||||| ||||||||||| ||||||||||||||  |||||||    
T  15161265 tatcaaccaacatacgccaacaccacttccctaacaaagctatattaaa 15161313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 15472144 - 15472096
Alignment:
Q  70 tatccaccaacatccgccaacaccatttccctaacaaagcactattaaa 118  Q
    |||| |||||||| ||||||||||| ||||||||||||||  |||||||    
T  15472144 tatcaaccaacatacgccaacaccacttccctaacaaagctatattaaa 15472096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 17078776 - 17078668
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| | ||||| ||||||||| | ||| ||||| || | |||||| ||||||   ||||| || | ||||| ||||||||| || ||    
T  17078776 ccccaacctccaacctcccacctacttcgccataacgggcgactaagactcgataccaaaaaccactcctatcaactagcatcctccaacaccactttcc 17078677  T
Q  101 taacaaagc 109  Q
    ||| |||||    
T  17078676 taataaagc 17078668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 18682131 - 18682035
Alignment:
Q  30 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    ||||||||||| || || ||| || |||| || || ||||| || || |||| || |||||||||||| |||||||||||| | ||||| |||||||    
T  18682131 ccatacctggccaccaacaccttacaccataacccctctctgtcaactaacaacctccaacaccattttcctaacaaagcagtgttaaaatccctca 18682035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 155
Target Start/End: Complemental strand, 20882561 - 20882465
Alignment:
Q  59 caaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcc 155  Q
    ||||||||| ||| | || |||| |||||||||||||||| | ||||||||| | |||||||| |||| |   || || |||| |||||||||||||    
T  20882561 caaaccatccctaacaactaacaaccgccaacaccatttctccaacaaagcaatgttaaactctctcaacctcctaacacccatccctccatactcc 20882465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 26586823 - 26586879
Alignment:
Q  70 tatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||| |||||||||| ||||||||| ||||||||||| |||  |||||| |||||||    
T  26586823 tatcaaccaacatccaccaacaccacttccctaacaatgcaacattaaattccctca 26586879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 453 - 509
Target Start/End: Complemental strand, 32738069 - 32738013
Alignment:
Q  453 tctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||  |||||  |||| |||||||||| | ||||||||||||||||||    
T  32738069 tctccatttatatctttttcaatttcttgcaatttgaaaagagatagacacaaaaaa 32738013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 268; Significance: 1e-149; HSPs: 93)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 48 - 440
Target Start/End: Original strand, 31675532 - 31675924
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| |||||| |||||||||||||||| |||||||||||||| ||||||||||||   ||||||||||||| ||||||||| || |||||||    
T  31675532 accctataccaaaaaccacctctatccaccaacattcgccaacaccatttacctaacaaagcatggttaaactccctcaactgtctcacccctaaccctc 31675631  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||          |||||||||||||||||||    
T  31675632 catactcctttcgtaaacaaacagagtttcaagcgacccaggagattttcctgttatcctcactccctcccaaaaaaaaaatattaaaaatagattcaat 31675731  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagag 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  31675732 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaggacagacttgagtagaaccaaccgacccccaaaagag 31675831  T
Q  348 agaaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggctaacctcttcggatcaccaccaatagaa 440  Q
    ||||||||| |||||||||| |||||||||||||| || || ||||||||| | |||||||| ||||||||||||||||||||||||||||||    
T  31675832 agaaagcgattttgccaccccgataatctagacttaatggtcttcaacacaggctcccaaaatgctaacctcttcggatcaccaccaatagaa 31675924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 48 - 440
Target Start/End: Complemental strand, 31920890 - 31920499
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| |||||| |||||||||||||||| |||||||||||||| ||||||||||||   ||||||||||||| |||||||||||| |||||||    
T  31920890 accctataccaaaaaccacctctatccaccaacattcgccaacaccatttacctaacaaagcatggttaaactccctcaactgtctcactcctaaccctc 31920791  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||        |||||||||||||||||||||    
T  31920790 catactcctttcgtaaacaaacagagtttcaagcgacccaggagattttcctgttatcctcactccctccc-aaatttttttattaaaaatagattcaat 31920692  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagag 347  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  31920691 gacagagattatacttgacgaagctttgaagaaggaaagggcatagacaggcaatgaggtcaggacagacttgagtagaaccaaccgacccccaaaagag 31920592  T
Q  348 agaaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggctaacctcttcggatcaccaccaatagaa 440  Q
    ||||||||| |||||||||| |||||||||||||| || || ||||||||| | |||||||| ||||||||||||||||||||||||||||||    
T  31920591 agaaagcgattttgccaccccgataatctagacttaatggtcttcaacacaggctcccaaaatgctaacctcttcggatcaccaccaatagaa 31920499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 48 - 433
Target Start/End: Complemental strand, 40513263 - 40512878
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||  || ||  ||||| ||||| || |    
T  40513263 accctataccataaaccacctctatccaccaacatccgccaacaccatttacctaacaaagcactattaaaatcctgcaacttcctcacccccaaacccc 40513164  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    |||||||||| ||||| ||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||       ||||||||||| |||||||||    
T  40513163 catactccttacgtaagcaaacagagctccaagctacccaggaaattttcctgttttcctcactccctccccaaaaaaatttattaaaaagagattcaat 40513064  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagag 347  Q
    || ||||||||||||||||||||| |||||||||||||| ||||||||||| ||||  |||| ||||||||| ||||| |||||||||||  ||||||||    
T  40513063 gatagagattatacctgacggagccttgaagaaggaaagagcatagacaggtaatgcagtcaggacagacttaagaaggaccaaccgacctccaaaagag 40512964  T
Q  348 agaaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggctaacctcttcggatcaccacc 433  Q
    ||||| ||||||||||||||  | | |||||| || || |||| |||||||   ||||| || ||||| ||| | |||||||||||    
T  40512963 agaaaacgactttgccaccccaacagtctagatttaattgtttgcaacacagaatcccagaatgctaatctccttggatcaccacc 40512878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 48 - 436
Target Start/End: Original strand, 34829994 - 34830382
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||| |||||||||||||||||||| ||   || ||  ||||| ||||||||||    
T  34829994 accctataccataacccaactatatccaccaacatccgccaacaccatttacctaacaaagcactattaaattcatgcaacttcctcacccccaaccctc 34830093  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    |||||||||| ||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||| |||        ||||||||||||||||||||    
T  34830094 catactccttacgtaaacaaacagagctccaagcaatccaggaaattttcctgttatcctcactccct-cccaaaaaaaattattaaaaatagattcaat 34830192  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccga-ccctcaaaaga 346  Q
    | ||||||||||||||||||||||   |||||||||||| ||||||||||| ||   ||||| ||||||||| ||||| ||||||||| ||| || ||||    
T  34830193 ggcagagattatacctgacggagccaggaagaaggaaagagcatagacaggtaacacggtcaggacagacttaagaaggaccaaccgaccccccataaga 34830292  T
Q  347 gagaaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggctaacctcttcggatcaccaccaat 436  Q
    |||||| |||||||||||||| || |||||||| || || || |||| |||  ||||||| || |||||||||  ||| |||||||||||    
T  34830293 gagaaaacgactttgccaccccgacaatctagatttaatggtattcatcactggttcccagaatgctaacctccacgggtcaccaccaat 34830382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 48 - 415
Target Start/End: Original strand, 19875844 - 19876211
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| || ||| ||||||| | ||||| ||||||||||||||| |  | ||||||   |||||| |||| || | | ||||| ||||  ||||    
T  19875844 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttactcatcaaagctaaattaaattcccgcaacagcctcacccccagacctc 19875943  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    || ||||||||  ||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||       ||||||||| | |||||||||    
T  19875944 caaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctcgccaaaaaaatttattaaacaaagattcaat 19876043  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagag 347  Q
    || ||| |||||||||||||||| ||||||||||||||| ||||||||||| |  || |||| ||||||||| ||||||||||| |||||| | |||||     
T  19876044 gagagaaattatacctgacggagatttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaaccaagcgacccccgaaagat 19876143  T
Q  348 agaaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggctaa 415  Q
    ||||| | |||||||||||| || |||||||  || |||||   || |||| |||||||||| |||||    
T  19876144 agaaaacaactttgccaccccgacaatctagttttaatagtagacaccacaggttcccaaaaagctaa 19876211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 358
Target Start/End: Complemental strand, 6176064 - 6175706
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| ||    
T  6176064 ccccaacctccaacctgccacctaattcgccatacctggcgactaaaaccctataccacaaaccacctctgtccaccagcatccgccaacaccattttcc 6175965  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    |||||||||   |||||||||| |||  |  | ||| ||||| || | |||||| | |  |||||||||||  | ||||   | ||| |||||||||||     
T  6175964 taacaaagctaaattaaactccttcaatttccgcacccccaaaccgcaatactcatgttttaaacaaacagtttgccaacttaaccaagaaattttccta 6175865  T
Q  201 ttatcctcactccctcccc--nnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    |||||||||||||| ||||         || ||||| || |||||||||    |||||||||||||  |||| ||||||||||||||| |||||||||||    
T  6175864 ttatcctcactccccccccaaaaaaaaattaattaacaa-agattcaatagaggagattatacctgttggagttttgaagaaggaaagtgcatagacagg 6175766  T
Q  299 caatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgact 358  Q
    ||  || ||||||||||| ||||| |||||||| |||||  ||||||||||||| |||||    
T  6175765 cagagatgtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaaaccgact 6175706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 194 - 440
Target Start/End: Original strand, 53941993 - 53942239
Alignment:
Q  194 tttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatag 293  Q
    |||| |||||||||||||||||||||       ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  53941993 tttcatgttatcctcactccctccccaaaattttttattaaaaatagattcaatgatagagattatacctgacggagctttgaagaaggaaagagcatag 53942092  T
Q  294 acaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctagactttatagttttca 393  Q
    ||| | |  ||||||||||||||||| | ||| |||||||||||  || | || ||||||||||| |||||||| || ||||| ||||| || || | ||    
T  53942093 acaagaagcgaggtcaagacagactttaaaaggaccaaccgaccaccataggatagaaagcgactctgccaccccgacaatctggacttaattgtatgca 53942192  T
Q  394 acacaagttcccaaaaggctaacctcttcggatcaccaccaatagaa 440  Q
    ||||| | ||||| || |||||||  ||||||| |||||||||||||    
T  53942193 acacaggatcccagaatgctaaccgattcggattaccaccaatagaa 53942239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 45 - 414
Target Start/End: Original strand, 55367208 - 55367576
Alignment:
Q  45 aaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaacc 144  Q
    |||||| |||||||||| ||| ||||||| || ||||||| |||||||||||| |||||||| |||  |||||| ||| ||| ||  ||||| |||||||    
T  55367208 aaaaccttataccacaacccacctctatcaactaacatcctccaacaccattttcctaacaacgcaagattaaattccttcaacttcctcacccccaacc 55367307  T
Q  145 ctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattc 244  Q
    | ||||||||||||||| |||||| | | |||||||||| |||||||||||||||||| ||||||||||||||||         | ||||| | ||||||    
T  55367308 c-ccatactcctttcgtgaacaaatataattccaagcgatccaggaaattttcctgttgtcctcactccctccccaaaaaaacattttaaacaaagattc 55367406  T
Q  245 aatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaa 344  Q
     |||  ||||||||||||||||| ||||||||| |||||||| || |||||| |||| |||| || |||||||||||  | |||||| || ||  | ||     
T  55367407 tatggaagagattatacctgacgcagctttgaaaaaggaaagagcgtagacaagcaaagaggacaggacagacttgatcaaaaccaatcggcctccgaat 55367506  T
Q  345 gagagaaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggcta 414  Q
    |||||||| ||||| |||||||| || |||||||| || || || | ||||||| | |||||||| ||||    
T  55367507 gagagaaaacgactctgccacccggacaatctagatttaatggtatgcaacacagggtcccaaaatgcta 55367576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 30166930 - 30166773
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||| |||| || ||||||||||||||||||||||| ||    
T  30166930 ccccaacctccaacctgccacctaattcgccatacctggcaactaagacactataccacaaaccacctctgtcaaccaacatccgccaacaccatttacc 30166831  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactccttt 158  Q
    |||||||||||||||||| ||| ||| ||| ||||| ||||| ||||||| |||||||    
T  30166830 taacaaagcactattaaattccttcaactgcctcacccccaaacctccattctccttt 30166773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 29309962 - 29310067
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||| || | |||||||||||||||||||||||||| ||    
T  29309962 ccccaacctccaacctgccacctaattcggcatacctggcgactaaaaccctataccacaaaccacctttgtccaccaacatccgccaacaccattttcc 29310061  T
Q  101 taacaa 106  Q
    ||||||    
T  29310062 taacaa 29310067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 30 - 378
Target Start/End: Complemental strand, 962720 - 962372
Alignment:
Q  30 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagct 129  Q
    |||||||| || ||||| ||||||  |||||| |||||||| || || |||| || |||||||||||| |||||||||||| |||||||||||||||       
T  962720 ccatacctagccactaacaccctacgccacaacccatctctctctactaacaacctccaacaccattttcctaacaaagcaatattaaactccctcaaac 962621  T
Q  130 gtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnnttt 229  Q
      || || |||| |||||| |||||||| |  ||||| | ||| ||||||   | ||| |  ||||| || ||||||||||| || ||||       |||    
T  962620 tcctaacacccatccctccgtactccttcctcaaacataaagaattccaactaatccacgttatttttcttttatcctcacttcccccccaaaaaaattt 962521  T
Q  230 attaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacc 329  Q
    ||| || | ||||||||||  ||||||||||||||||||||||||||| |||||||| ||||||||||| | ||  |||| |||||| |||||||| | |    
T  962520 atttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacaggaagtgcagtcaggacagatttgagaaggatc 962421  T
Q  330 aaccgaccctcaaaagagagaaagcgactttgccaccctgataatctag 378  Q
    ||||| ||  ||||||| || || ||||| ||||| || || |||||||    
T  962420 aaccggccaccaaaagaaaggaaccgactatgccaaccagacaatctag 962372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 138 - 367
Target Start/End: Original strand, 14309263 - 14309499
Alignment:
Q  138 cccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctcccc-nnnnnnntttattaaa- 235  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||| | | |||||||||||||||||||||||||||||||||         |||  |||     
T  14309263 cccaaccctccatactccttttgtaaacaaatagagctccaagcaatctaggaaattttcctgttatcctcactccctccccaaaaaaaaattaaaaaat 14309362  T
Q  236 -----aatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 330  Q
         |||||||||||| | ||| || ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||| |||||| ||||| ||||| |    
T  14309363 agattaatagattcaataagagaaatgatacctgacggagctatgaagaaggaaagagcatagacaagaagcgaggtcaggacagatttgaggagaacta 14309462  T
Q  331 accgaccctcaaaagagagaaagcgactttgccaccc 367  Q
    | || ||| | ||||| | ||||||||||||||||||    
T  14309463 atcggcccccgaaagataaaaagcgactttgccaccc 14309499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 444 - 509
Target Start/End: Original strand, 49679230 - 49679295
Alignment:
Q  444 tcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49679230 tcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 49679295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 439 - 509
Target Start/End: Complemental strand, 42613200 - 42613130
Alignment:
Q  439 aagggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  42613200 aagggtcaagatcctctccatttataaattttttcatttgttgcaatttgaagagagatagacaaaaaaaa 42613130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 27959208 - 27959140
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  27959208 gggtcaagatcctctccatttataaatttttccatttgttgcaatttggggagagatagacacaaaaaa 27959140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 21740109 - 21739984
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| | ||||| ||||||||| | ||| |||| ||| | |||||| |||||  ||||||| |||||||||| |||||||||||| ||    
T  21740109 ccccaacctccaacctcccacctacttcgccataacgggcgactagaacacaataccataaacctactctatctaccaacatcctccaacaccatttacc 21740010  T
Q  101 taacaaagcactattaaactccctca 126  Q
    ||||||||||  ||||||||||||||    
T  21740009 taacaaagcaaaattaaactccctca 21739984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 227 - 379
Target Start/End: Original strand, 2365058 - 2365210
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    ||||||||| | ||||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||| |  |  |||| ||||||||| ||||||    
T  2365058 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 2365157  T
Q  327 accaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctaga 379  Q
    | ||| |||||  | ||||| || || ||||||||||| || || ||||||||    
T  2365158 atcaaacgaccaccgaaagataggaaccgactttgccaaccagacaatctaga 2365210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 10 - 330
Target Start/End: Complemental strand, 43121251 - 43120931
Alignment:
Q  10 ccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagc 109  Q
    ||||||| | ||||| ||||||||| | ||| |||||||| | |||||| ||||||   ||||| || | ||||| |||||||||||| |||||||||||    
T  43121251 ccaacctcctacctatttcgccataacgggcgactaaaactcgataccaaaaaccactcctatcaacaagcatcctccaacaccattttcctaacaaagc 43121152  T
Q  110 actattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctca 209  Q
       |||||||| | ||| || |||||| ||||| |||||| |||||||  | |  || |||   | |||  | | ||| || |||||||| | |||||||    
T  43121151 ctgattaaacttcttcaactatctcacccccaaacctccaaactccttatggaggcacacattatgccaccctatccaagatattttcctatgatcctca 43121052  T
Q  210 ctccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 309  Q
    ||||| ||||       ||||||||| | ||||||||||  ||||||||||||| | |||||||||||||||||||  |||||||||| ||  |||||||    
T  43121051 ctcccaccccaaaaaaatttattaaacaaagattcaatggaagagattatacctaatggagctttgaagaaggaaaacgcatagacagacagagaggtca 43120952  T
Q  310 agacagacttgagaagaacca 330  Q
     |||||| || | ||||||||    
T  43120951 ggacagattttaaaagaacca 43120931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 56 - 386
Target Start/End: Complemental strand, 12341786 - 12341456
Alignment:
Q  56 ccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcc 155  Q
    |||||||||  | ||||| || |||| |||||||||||||||||| ||||||||| | |||||||| |||| |   ||||| ||||||||||||||||||    
T  12341786 ccacaaacctcccctatcaactaacagccgccaacaccatttccccaacaaagcaatgttaaactctctcaacctcctcacacccaaccctccatactcc 12341687  T
Q  156 tttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagaga 255  Q
     | |  ||||| | |||  ||||| | ||||| ||||| || || ||||||||||  || ||||       |||||| || | |||||||||   |||||    
T  12341686 ctcctcaaacacaaagaactccaaccaacccaagaaatctttcttttatcctcacaacccccccaaaaaaatttatttaacaaagattcaatagaagaga 12341587  T
Q  256 ttatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcg 355  Q
    ||||||| ||||||||||| || |||||||| | ||||||||| |  |  ||||||||||| |||||||| | ||| |||||  |||| || ||  | |     
T  12341586 ttatacccgacggagctttaaaaaaggaaagtgtatagacaggaagcgcagtcaagacagatttgagaagtatcaagcgaccaccaaaggaaaggtacct 12341487  T
Q  356 actttgccaccctgataatctagactttata 386  Q
    ||| ||||| || || |||||||||||||||    
T  12341486 actatgccaaccagacaatctagactttata 12341456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 446 - 509
Target Start/End: Original strand, 31523630 - 31523693
Alignment:
Q  446 aagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||    
T  31523630 aagatcctctccatttataaatttctccatttattgcaatttggagagagatagacacaaaaaa 31523693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 239 - 386
Target Start/End: Complemental strand, 48569371 - 48569224
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 338  Q
    ||||||||||  ||||||||||||||| ||||||||||| |||||||| ||||||||||| | ||  |||| ||| || |||||||||| ||| |||||     
T  48569371 agattcaatggaagagattatacctgatggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacggatttgagaagaatcaaacgacca 48569272  T
Q  339 tcaaaagagagaaagcgactttgccaccctgataatctagactttata 386  Q
     ||||||| || || ||||| ||||| || || |||||||| ||||||    
T  48569271 ccaaaagaaaggaaccgactatgccaaccagacaatctagattttata 48569224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 183 - 298
Target Start/End: Complemental strand, 19919633 - 19919518
Alignment:
Q  183 acccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaagg 282  Q
    ||||| || ||||| || || ||||||||||||||||       ||||||||| | ||||||||||  |||||||||||||| |||||||||||||||||    
T  19919633 acccaagatatttttcttttttcctcactccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaagg 19919534  T
Q  283 aaagggcatagacagg 298  Q
    |||| |||||||||||    
T  19919533 aaagtgcatagacagg 19919518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 360
Target Start/End: Complemental strand, 17271098 - 17270969
Alignment:
Q  231 ttaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 330  Q
    ||||||||||||||||||  | |||||||||||||| || ||||||| ||| |||| || |||||| | |  ||||||| ||||||||| |||| || ||    
T  17271098 ttaaaaatagattcaatggaacagattatacctgacagaactttgaaaaagaaaagagcgtagacatgaagagaggtcaggacagacttcagaaaaatca 17270999  T
Q  331 accgaccctcaaaagagagaaagcgacttt 360  Q
    | |||||| ||||||||||||| |||||||    
T  17270998 aacgacccccaaaagagagaaaacgacttt 17270969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 227 - 379
Target Start/End: Complemental strand, 34332175 - 34332023
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    ||||||||| | ||||||||||  |||||||||||||||||||||||| || |||||||| ||||||||||| |  |  |||| ||||||||| || |||    
T  34332175 tttattaaacaaagattcaatggaagagattatacctgacggagctttaaaaaaggaaagtgcatagacaggtagagcagtcaggacagactttagtaga 34332076  T
Q  327 accaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctaga 379  Q
    | ||| |||||  | ||||| || || ||||||||||| || || ||||||||    
T  34332075 atcaaacgaccaccgaaagaaaggaaccgactttgccaaccagacaatctaga 34332023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 298
Target Start/End: Original strand, 18381656 - 18381899
Alignment:
Q  45 aaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaacc 144  Q
    ||||||| |||||| || ||  ||||||| |||||||| | ||||||||| || |||| ||||||   |||||| || |||| |||||||||      ||    
T  18381656 aaaacccaataccataaccctcctctatcaaccaacattctccaacaccacttacctagcaaagctaaattaaagtctctcaactgtctcac------cc 18381749  T
Q  145 ctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattc 244  Q
    ||  ||||||||||||  |||||||| || ||||||||| ||||||||||||||| |||||||||||||| |||           | | |||||||||||    
T  18381750 ct--atactcctttcgagaacaaacatagctccaagcgatccaggaaattttcctattatcctcactcccacccaaaaaaaa--aaatcaaaatagattc 18381845  T
Q  245 aatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||  ||| ||||||||||| ||||||||||| |||||||  |||||||||||    
T  18381846 aatggaagatattatacctgatggagctttgaaaaaggaaatagcatagacagg 18381899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 15481344 - 15481049
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | ||||| || |||||| | ||| |||| |||   ||||||||| || ||||| || || ||||||| |||||||||||| ||    
T  15481344 cccccacctccaacctcccacctactttgccataacgggcgactagaacatgataccacaacccttctctgtcaactaacatcctccaacaccatttacc 15481245  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    ||| |||||| ||||||||||| ||| ||  || || ||||| ||||||| |||||||    |||| |  |  |||||| | | ||| | |||||| ||     
T  15481244 taataaagcaatattaaactccttcaacttcctaacccccaaacctccatgctcctttttagaacacaaggtattccaacctatccaagtaatttttcta 15481145  T
Q  201 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagaca 296  Q
      |||||||||||| ||||        ||||| || | ||||||||||  ||||||||||||||| |||||||||||||| ||||| |||||||||    
T  15481144 caatcctcactcccaccccaaaaaaaattattcaataaagattcaatggaagagattatacctgatggagctttgaagaaagaaagagcatagaca 15481049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 343
Target Start/End: Complemental strand, 16672375 - 16672265
Alignment:
Q  233 aaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaac 332  Q
    ||||||||| |||| |  ||| ||||||||||||||||| ||||||||||||||  |||||||||| |  ||||||||||||||||| || ||||| |||    
T  16672375 aaaaatagaatcaagggaagaaattatacctgacggagccttgaagaaggaaagaacatagacaggtagagaggtcaagacagactttaggagaactaac 16672276  T
Q  333 cgaccctcaaa 343  Q
    || || |||||    
T  16672275 cggccatcaaa 16672265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 298
Target Start/End: Complemental strand, 52907401 - 52907331
Alignment:
Q  228 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    |||||||| |||||||||||   ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  52907401 ttattaaacatagattcaatagaagagattatacctgatggagctttgaagaaggaaagggcataaacagg 52907331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 36709464 - 36709621
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | ||||| ||||||||| | ||| ||||||||   ||||||||| || ||||| || || ||||||| |||||||||||| ||    
T  36709464 cccccacctccaacctcccacctacttcgccataacgggcgactaaaacatgataccacaacccttctctgtcaactaacatcctccaacaccatttacc 36709563  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactccttt 158  Q
    ||  |||||| ||||||||||| ||| ||  || || ||||| ||||||| |||||||    
T  36709564 tagtaaagcaatattaaactccttcaacttcctaacccccaaacctccatgctccttt 36709621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 448 - 509
Target Start/End: Complemental strand, 45799193 - 45799132
Alignment:
Q  448 gatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||| | ||||||    
T  45799193 gatcctctccatttataacatttttcatttgttgcaatttggagagagatagataaaaaaaa 45799132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 319
Target Start/End: Original strand, 23819357 - 23819437
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 319  Q
    ||||||||||  ||||||||||| ||| |||||||||||||||||||| ||||| |||||||  ||||||| |||||||||    
T  23819357 agattcaatggaagagattatacttgatggagctttgaagaaggaaagcgcatatacaggcagagaggtcaggacagactt 23819437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 46908018 - 46907926
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaa 331  Q
    ||||||||||  ||||||||||| ||| |||||||||||||||||||| ||||||| |||||  |||||||  |||||||| | |||||||||    
T  46908018 agattcaatggaagagattatacttgatggagctttgaagaaggaaagagcatagataggcagagaggtcagaacagactttaaaagaaccaa 46907926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 53642069 - 53642137
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| ||||| |||||||||||||| |||||  ||||||||||||||||||||||||||||| ||||||    
T  53642069 gggttaagattctctccatttataattttttctatttgttgcaatttggagagagatagacaaaaaaaa 53642137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 441 - 496
Target Start/End: Original strand, 28792331 - 28792386
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagaga 496  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  28792331 gggtaaagatcctctccatttataatatttttcatttgttgcaatttggagagaga 28792386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 364
Target Start/End: Original strand, 8130760 - 8130890
Alignment:
Q  234 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 333  Q
    ||||||||||| |||  ||||||| ||||||  ||||| |||||||||||||| |||||||| ||    | ||||||||||||||| ||||||| ||| |    
T  8130760 aaaatagattctatggaagagattctacctgctggagccttgaagaaggaaagagcatagaccggttgcgcggtcaagacagactttagaagaatcaagc 8130859  T
Q  334 gaccctcaaaagagagaaagcgactttgcca 364  Q
    ||||  |||| || ||||| |||||||||||    
T  8130860 gacctccaaatgaaagaaatcgactttgcca 8130890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 48 - 158
Target Start/End: Complemental strand, 25024383 - 25024273
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||||||||| ||| | | ||    ||||||||||| || ||| || |||||||||||||    
T  25024383 accctataccaaaaaccatctctatccactaacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctc 25024284  T
Q  148 catactccttt 158  Q
    ||  |||||||    
T  25024283 caagctccttt 25024273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 228 - 330
Target Start/End: Original strand, 50545024 - 50545126
Alignment:
Q  228 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 327  Q
    |||||||| | ||||||||||  ||||||||||||||| ||| |||||||||||||||  |||||||| || |  ||||||| ||||||||| | |||||    
T  50545024 ttattaaataaagattcaatggaagagattatacctgatggacctttgaagaaggaaaacgcatagacgggtagagaggtcaggacagactttaaaagaa 50545123  T
Q  328 cca 330  Q
    |||    
T  50545124 cca 50545126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 333
Target Start/End: Complemental strand, 52250457 - 52250379
Alignment:
Q  255 attatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 333  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| |  |||||||||||| |||| || ||||| ||||    
T  52250457 attatacctgacggagccttgaagaaggaaagcgcatagacaggtagagaggtcaagacaaactttaggagaactaacc 52250379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 24926033 - 24925972
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    ||||||||||  ||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  24926033 agattcaatggaagagattatacctgatggagctttgaagaaagaaagtgcatagacaggca 24925972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 294
Target Start/End: Original strand, 36731638 - 36731740
Alignment:
Q  192 attttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcat 291  Q
    |||||||| ||||||||||| || ||||       |||||| || | ||||||||||  ||||||||||||||||||||||||||| |||||||| ||||    
T  36731638 attttcctattatcctcacttcccccccccaaaaatttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcat 36731737  T
Q  292 aga 294  Q
    |||    
T  36731738 aga 36731740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 42675025 - 42674904
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | | ||| ||||||||| | ||| |||||||||  ||||||||| || |||||||| || ||||||| |||||||||||| ||    
T  42675025 cccccacctccaacctcccatctacttcgccataacgggcgactaaaacctgataccacaacccttctctatcaactaacatcctccaacaccatttacc 42674926  T
Q  101 taacaaagcactattaaactcc 122  Q
    ||  ||| || |||||||||||    
T  42674925 tagtaaaacaatattaaactcc 42674904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 45684730 - 45684851
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | ||||| ||||||||| |  || |||||||||  ||||||||  || |||||||| || ||||||| |||||||||||| ||    
T  45684730 cccccacctccaacctcccacctacttcgccataacgagcgactaaaacctgataccacagcccttctctatcgactaacatcctccaacaccatttacc 45684829  T
Q  101 taacaaagcactattaaactcc 122  Q
    ||  |||||| |||||||||||    
T  45684830 tagtaaagcaatattaaactcc 45684851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 48930324 - 48930405
Alignment:
Q  45 aaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||||||||| |||| ||  || || ||||||| ||||||||||||||| |||||||| ||| |||||||||||||||    
T  48930324 aaaaccctataccataaactattcctctctaccaacagccgccaacaccatttacctaacaatgcaatattaaactccctca 48930405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 3141434 - 3141530
Alignment:
Q  30 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||| || ||||| ||||||  |||||| |||||||| || || |||| || |||||||||||| |||||||||||| | |||||||||||||    
T  3141434 ccatacctagccactaacaccctacgccacaacccatctctctctactaacaacctccaacaccattttcctaacaaagcagtgttaaactccctca 3141530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 10868198 - 10868282
Alignment:
Q  42 actaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||| ||| ||||| || |||||  ||||||| |||||||||| |||||||||||| ||||||||||||  ||||||||||||||    
T  10868198 actagaacactatatcagaaacctactctatctaccaacatcctccaacaccatttacctaacaaagcaaaattaaactccctca 10868282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 53941908 - 53941980
Alignment:
Q  52 tataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccct 124  Q
    ||||||| || || ||||||||||||||||||| |||||||||||| ||||| ||||||  ||||||||||||    
T  53941908 tataccagaacccctctctatccaccaacatcctccaacaccattttcctaataaagcataattaaactccct 53941980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 16179732 - 16179791
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||||  |||||||||||||||| |||||||||| |||||||| |||||||||||    
T  16179732 agattcaatggaagagattatacctgacagagctttgaaaaaggaaagtgcatagacagg 16179791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 296
Target Start/End: Complemental strand, 22734262 - 22734014
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||| ||| || | ||||||| || |||| |  |||||||||||| ||||  |||||| ||||||| ||||| | ||  |||||  |||| ||||    
T  22734262 accctatacaacagactacctctatcgactaacaactaccaacaccatttacctagtaaagcaatattaaattcccttaacttcctcacctccaatcctc 22734163  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    |||||||||| || |||||||||   ||||||   | ||| || |||||||| | |||||||||||| |||         ||||| || |||||||||||    
T  22734162 catactccttacgcaaacaaacaatattccaacgtaaccaagatattttcctatgatcctcactcccccccaaaaaaaaattattcaatatagattcaat 22734063  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagaca 296  Q
    |  ||||||||||| ||| ||||| ||||||||| | || |||||||||    
T  22734062 ggaagagattatacatgatggagccttgaagaagaacagagcatagaca 22734014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 14863804 - 14863742
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 301  Q
    ||||||||||  ||||||||||||| | |||||||| ||||||||||| ||||||||||||||    
T  14863804 agattcaatggaagagattatacctaatggagctttaaagaaggaaagagcatagacaggcaa 14863742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 21739836 - 21739774
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 301  Q
    ||||||||||  |||||||||| |||| |||||||| ||||||||||| ||||||||||||||    
T  21739836 agattcaatggaagagattataactgatggagctttaaagaaggaaagagcatagacaggcaa 21739774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 230 - 316
Target Start/End: Complemental strand, 30166680 - 30166594
Alignment:
Q  230 attaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacaga 316  Q
    |||||| | |||||||| |  ||| ||||||||||| |||||||||||||| ||||||||||||||||| |  || |||||||||||    
T  30166680 attaaataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 30166594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 14864051 - 14863926
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | ||| |  |||||||| | ||| || | ||| |||||||| |||||  || |||| |||||||||| |||||||||||| ||    
T  14864051 cccccacctccaacctcccacccacctcgccataacaggcgacaagaacactataccataaacctactttatcgaccaacatcctccaacaccatttacc 14863952  T
Q  101 taacaaagcactattaaactccctca 126  Q
    |||||| |||  ||||||||||||||    
T  14863951 taacaatgcaaaattaaactccctca 14863926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 17077645 - 17077588
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagaca 296  Q
    ||||||||||  |||||||||||||||| |||||||||| |||||||| |||||||||    
T  17077645 agattcaatggaagagattatacctgacagagctttgaaaaaggaaagtgcatagaca 17077588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 158
Target Start/End: Complemental strand, 24926233 - 24926117
Alignment:
Q  42 actaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactccca 141  Q
    |||||||| | |||||||||||| ||||||||||| ||||||| ||||||||||||  |||  || ||| ||||||||||  ||| ||  || || | ||    
T  24926233 actaaaacacgataccacaaaccttctctatccactaacatcctccaacaccatttttctagtaaggcaatattaaactctttcaacttcctaaccctca 24926134  T
Q  142 accctccatactccttt 158  Q
    ||||||||| |||||||    
T  24926133 accctccatgctccttt 24926117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 485
Target Start/End: Complemental strand, 28219584 - 28219540
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaat 485  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||    
T  28219584 gggtcaagatcctctccatttataaatttttccatttgttccaat 28219540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 35503027 - 35502975
Alignment:
Q  72 tccaccaacatccgccaacaccatttccctaacaaagcactattaaactccct 124  Q
    |||| ||||| |||||||||||| ||||| |||||||||||||||||||||||    
T  35503027 tccatcaacaaccgccaacaccacttcccaaacaaagcactattaaactccct 35502975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 48569596 - 48569500
Alignment:
Q  30 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||| || || || ||||||  |||||| ||||||||||| || |||| |||||||||||||||| ||| ||||||| | |||||||| ||||    
T  48569596 ccatacctagccaccaacaccctacgccacaacccatctctatcaactaacaaccgccaacaccatttctctagcaaagcaatgttaaactctctca 48569500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 319
Target Start/End: Original strand, 6825598 - 6825684
Alignment:
Q  233 aaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 319  Q
    ||||||||| |||| |  ||| ||||||| ||||||||| |||||||||||||| ||||||||||| |   |||||||||| |||||    
T  6825598 aaaaatagaatcaagggaagaaattatacttgacggagccttgaagaaggaaagagcatagacaggtagaaaggtcaagacggactt 6825684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 337
Target Start/End: Original strand, 7164296 - 7164378
Alignment:
Q  255 attatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacc 337  Q
    ||||||||||| |||||  ||||||||||||| ||||| | ||| |  |||||||||||| |||| |||||||| ||||||||    
T  7164296 attatacctgatggagccctgaagaaggaaagagcataaataggaagagaggtcaagacaaactttagaagaactaaccgacc 7164378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 8948348 - 8948278
Alignment:
Q  258 atacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 328  Q
    |||||||| |||||||||||||||||||  ||||||||||| |  ||||||| |||| |||| ||||||||    
T  8948348 atacctgagggagctttgaagaaggaaatagcatagacagggagagaggtcaggacaaacttaagaagaac 8948278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 20356865 - 20356787
Alignment:
Q  132 ctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcac 210  Q
    ||||| ||||||||||||| ||||||| ||||||| ||||||| |||| | ||||| || ||||||||  |||||||||    
T  20356865 ctcacacccaaccctccatcctcctttggtaaacacacagagtcccaatcaacccatgagattttcctaatatcctcac 20356787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 330
Target Start/End: Original strand, 44888709 - 44888787
Alignment:
Q  252 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 330  Q
    |||||||||||||| || ||| ||||||||||||  ||||||||||| |  |||| |||||||||||| || |||||||    
T  44888709 gagattatacctgatggtgctctgaagaaggaaaaagcatagacaggaagagaggacaagacagacttaaggagaacca 44888787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 52250640 - 52250586
Alignment:
Q  72 tccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    ||||||||||  ||||||||||||||||||||||| |||  ||||||||||||||    
T  52250640 tccaccaacaaacgccaacaccatttccctaacaacgcaacattaaactccctca 52250586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 157
Target Start/End: Complemental strand, 10323102 - 10323001
Alignment:
Q  56 ccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcc 155  Q
    ||||||| |||| || |||| ||||| || |||||||||||| || ||||||||| | |||||||||||||||    | || |||||||||||| |||||    
T  10323102 ccacaaagcatccctctccaacaacaacctccaacaccatttacccaacaaagcaatgttaaactccctcagcctcttaacccccaaccctccaaactcc 10323003  T
Q  156 tt 157  Q
    ||    
T  10323002 tt 10323001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 10868437 - 10868498
Alignment:
Q  240 gattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 301  Q
    |||||||||  |||||||||||||||  ||||||| ||||||||||| ||||| ||||||||    
T  10868437 gattcaatggaagagattatacctgatagagctttaaagaaggaaagagcatatacaggcaa 10868498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 441 - 502
Target Start/End: Complemental strand, 28792497 - 28792436
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagaca 502  Q
    |||| |||||| |||||||||||||   |||  |||||||||||||||||||||||||||||    
T  28792497 gggttaagatcatctccatttataaccatttctatttgttgcaatttggagagagatagaca 28792436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 36709701 - 36709762
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    ||||||||||  ||||||||||||||  |||||||||||||| ||||| |||| ||||||||    
T  36709701 agattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatcgacaggca 36709762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 42674786 - 42674725
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    ||||||||||  |||||||| |||||  |||||||||||||| ||||| |||||||||||||    
T  42674786 agattcaatggaagagattacacctgttggagctttgaagaaagaaagagcatagacaggca 42674725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 43284893 - 43284812
Alignment:
Q  45 aaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||| |||||||||| || ||| ||||||  ||||||| | |||||||||||||||| | |||| |||||||||| ||||    
T  43284893 aaaaccttataccacaatccctctttatccattaacatcctctaacaccatttccctaaaatagcaatattaaactctctca 43284812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 233 - 298
Target Start/End: Original strand, 48930512 - 48930577
Alignment:
Q  233 aaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||| |||| |  ||| ||||||||||||||||| |||||||||| ||| |||||||||||    
T  48930512 aaaaatagaatcaagggaagaaattatacctgacggagccttgaagaaggtaagagcatagacagg 48930577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 327
Target Start/End: Original strand, 19891469 - 19891557
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 327  Q
    ||||||||||  ||| ||||||||||||||||||||||| ||||||||  |||| ||||| |  |  ||||||||||| ||||| ||||    
T  19891469 agattcaatggaagatattatacctgacggagctttgaaaaaggaaagttcataaacaggaagcgcagtcaagacagatttgagtagaa 19891557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 38456753 - 38456829
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccct 124  Q
    |||||||||||||||| ||| |||||||||||   || ||||| ||| || ||||| |||||| |||||||||||||    
T  38456753 accctataccacaaactatccctatccaccaaacacctccaaccccacttgcctaataaagcaatattaaactccct 38456829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 42807270 - 42807322
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||| |||| |||| ||| ||||| ||||||||||||||||||||||||||    
T  42807270 accctaaaccataaactatccctatctaccaacatccgccaacaccatttccc 42807322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 315
Target Start/End: Original strand, 47538071 - 47538135
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacag 315  Q
    |||||||||| |||| |||| ||||||||||||||| ||||||||||| |  ||||||| |||||    
T  47538071 agagattatatctgatggagttttgaagaaggaaagcgcatagacaggtagagaggtcaggacag 47538135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 47772921 - 47772973
Alignment:
Q  54 taccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaa 106  Q
    |||||||| || ||| | ||||||||||||||||||||||||||||| |||||    
T  47772921 taccacaacccctctttgtccaccaacatccgccaacaccatttccccaacaa 47772973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 1231757 - 1231690
Alignment:
Q  54 taccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactc 121  Q
    |||||||| || ||| | ||||||||||||| ||||||||||||||| ||||||| |  |||||||||    
T  1231757 taccacaacccctctttttccaccaacatcctccaacaccatttccccaacaaagaaaaattaaactc 1231690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 16179586 - 16179657
Alignment:
Q  86 ccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctt 157  Q
    ||||||||||||||| ||||||||   |||||||||||||| |   || |||||||||||| ||||||||||    
T  16179586 ccaacaccatttccccaacaaagcgacattaaactccctcaacctcctaactcccaacccttcatactcctt 16179657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 46190075 - 46190186
Alignment:
Q  30 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagct 129  Q
    |||||||| || || || ||||| |||||||||||  || |||||||||||| ||||||||| || || | ||||||||||  |||||| ||||| | ||    
T  46190075 ccatacctcgccaccaataccctgtaccacaaacctcctttatccaccaacaaccgccaacatcactttcttaacaaagcaagattaaattccctaaact 46190174  T
Q  130 gtctcactccca 141  Q
    | ||||| ||||    
T  46190175 gcctcaccccca 46190186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 54439691 - 54439588
Alignment:
Q  3 ccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttcccta 102  Q
    ||||||||| | || ||||||| ||||||||| ||    ||||||||   |||||||||||| ||||||||||| || |||| |||||| ||||| ||||    
T  54439691 ccaacctcccatctccgacctatttcgccatatctaatgactaaaacgtaataccacaaaccttctctatccactaatatcctccaacatcatttaccta 54439592  T
Q  103 acaa 106  Q
    ||||    
T  54439591 acaa 54439588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 6893311 - 6893257
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttcccta 102  Q
    |||||| ||||||||| |||  | ||||||||||||||||||||||| |||||||    
T  6893311 accctaaaccacaaactatccttctccaccaacatccgccaacaccacttcccta 6893257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 8943969 - 8944047
Alignment:
Q  80 catccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactccttt 158  Q
    ||||| ||||||||||||  |||| | ||||  |||||||||| | | ||||||||| || ||||||||||||||||||    
T  8943969 catcctccaacaccatttatctaagatagcaaaattaaactccttaaactgtctcaccccaaaccctccatactccttt 8944047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 9510335 - 9510457
Alignment:
Q  30 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagct 129  Q
    |||||||| ||| | || |||| |||||| |||||| ||||||  || ||||||| ||||||||| || ||||||| ||   ||||||||||||||| ||    
T  9510335 ccataccttgcagccaacacccgataccaaaaaccacctctattaactaacatcctccaacaccactttcctaacatagatatattaaactccctcaact 9510434  T
Q  130 gtctcactcccaaccctccatac 152  Q
     | | |  |||||||||||||||    
T  9510435 atgtaaaccccaaccctccatac 9510457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 9518310 - 9518432
Alignment:
Q  30 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagct 129  Q
    |||||||| ||| | || |||| |||||| |||||| ||||||  || ||||||| ||||||||| || ||||||| ||   ||||||||||||||| ||    
T  9518310 ccataccttgcagccaacacccgataccaaaaaccacctctattaactaacatcctccaacaccactttcctaacatagatatattaaactccctcaact 9518409  T
Q  130 gtctcactcccaaccctccatac 152  Q
     | | |  |||||||||||||||    
T  9518410 atgtaaaccccaaccctccatac 9518432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 328
Target Start/End: Original strand, 17914449 - 17914547
Alignment:
Q  230 attaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 328  Q
    ||||||||||||||||||    || || |||||||  ||||||||||||||||||||   |||||| || |  |||| |||||||||||| ||||||||    
T  17914449 attaaaaatagattcaatagaggaaatgatacctgcgggagctttgaagaaggaaagaaaatagaccggaagagaggacaagacagacttaagaagaac 17914547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 20494608 - 20494572
Alignment:
Q  444 tcaagatcctctccatttataaattttttcatttgtt 480  Q
    |||||||||||||||||||||||||| | ||||||||    
T  20494608 tcaagatcctctccatttataaatttctccatttgtt 20494572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 20797918 - 20797958
Alignment:
Q  258 atacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    |||||||| |||||||||||||||||||  |||||||||||    
T  20797918 atacctgagggagctttgaagaaggaaaaagcatagacagg 20797958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 30188413 - 30188469
Alignment:
Q  70 tatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    ||||||||||||| ||||||||||| || |||||||| ||   ||||||||||||||    
T  30188413 tatccaccaacatacgccaacaccactttcctaacaacgctacattaaactccctca 30188469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 31523816 - 31523749
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||| ||||||||||||||||||||| | |||||||| | |||| |||||| | ||||||| ||||    
T  31523816 gggtcaatatcctctccatttataaatttctccatttgtt-ccatttagagagataaagacacataaaa 31523749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 35273710 - 35273818
Alignment:
Q  70 tatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaac 169  Q
    |||| |||||||||  ||||||||| |||||||||| || |  ||||||||| | || | |||| || |||||||||||||  |||||  | | ||||||    
T  35273710 tatcaaccaacatcttccaacaccacttccctaacagagaaaaattaaactctcccaaccgtctaacccccaaccctccatcttccttgggaacacaaac 35273809  T
Q  170 agagttcca 178  Q
    |||||||||    
T  35273810 agagttcca 35273818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 42613007 - 42613074
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||| ||||||||||||||||||||| | |||||||| | |||| |||||| | ||||||| ||||    
T  42613007 gggtcaatatcctctccatttataaatttctccatttgtt-ctatttagagagataaagacacataaaa 42613074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 49679418 - 49679351
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||| ||||||||||||||||||||| | |||||||| | |||| |||||| | ||||||| ||||    
T  49679418 gggtcaatatcctctccatttataaatttctccatttgtttc-atttagagagataaagacacataaaa 49679351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 52907760 - 52907700
Alignment:
Q  42 actaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttcccta 102  Q
    ||||| |||||||||||||| || |||||||| || ||||| | ||||||||| |||||||    
T  52907760 actaacaccctataccacaacccctctctatcaactaacattctccaacaccacttcccta 52907700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 53642248 - 53642180
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| ||||| ||||||||||||||  |||| |||||||||||||  ||||||||| | ||| ||||||    
T  53642248 gggttaagattctctccatttataacgttttccatttgttgcaatccggagagagacaaacataaaaaa 53642180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 184; Significance: 2e-99; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 48 - 440
Target Start/End: Original strand, 380502 - 380894
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  ||  |||||||||||||||||| ||| || || ||||| ||||    
T  380502 accctataccagaaaccatctctatccaccaacatccgccaacaccatttgcctagtaagacactattaaactccctcaactgcctgacccccaaacctc 380601  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    |||||||||| | |||||| | |||| ||||||| |||||||||||||||||||| ||||  ||||||||||        ||||||||||||||||||||    
T  380602 catactccttacataaacagatagagctccaagcaacccaggaaattttcctgttctccttgctccctccccaaaaaaaattattaaaaatagattcaat 380701  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagag 347  Q
    || ||| || |||||||| | |||||||||||||||||| ||||||||| |||  |||||||||||| |||| |||||||||||||| |||  |||||||    
T  380702 gatagaaatgatacctgatgaagctttgaagaaggaaagagcatagacatgcagagaggtcaagacaaactttagaagaaccaaccggcccctaaaagag 380801  T
Q  348 agaaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggctaacctcttcggatcaccaccaatagaa 440  Q
    ||||| |||||||||||||| || ||||||||||| || | |||||||||| | |||||||| ||||||||| ||| |||||| |||||||||    
T  380802 agaaaacgactttgccaccccgacaatctagacttaatggatttcaacacaggatcccaaaatgctaacctcctcgaatcacctccaatagaa 380894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 10486506 - 10486348
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||    
T  10486506 ccccaacctccaacctgccacctaattcgccatacctggcaactaaaaccgtataccacaaaccatctatgtccaccaacatccgccaacaccatttccc 10486407  T
Q  101 t-aacaaagcactattaaactccctcagctgtctcactcccaaccctccatactccttt 158  Q
    | ||||||||||||||||||||| ||| || |||||| ||||| |||||||||||||||    
T  10486406 taaacaaagcactattaaactccttcaactttctcacccccaaacctccatactccttt 10486348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 52 - 358
Target Start/End: Original strand, 42259885 - 42260193
Alignment:
Q  52 tataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccata 151  Q
    ||||||| || ||| ||||||||||||||||||| ||||||||||| |||||||| ||  ||||||||| |  || ||||||||| ||||  ||||||||    
T  42259885 tataccaaaacccacctctatccaccaacatccgtcaacaccatttacctaacaaggctatattaaacttcgccaactgtctcacccccagacctccata 42259984  T
Q  152 ctcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctcccc--nnnnnnntttattaaaaatagattcaatga 249  Q
    |||||| | ||||||| ||||| ||||||| | |||||||||||||| ||||||||||||||||||||         ||| ||||| | || |||||||     
T  42259985 ctccttacctaaacaagcagagctccaagcaatccaggaaattttccagttatcctcactccctccccaatttttttttttttaaataaagtttcaatgg 42260084  T
Q  250 cagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagag 349  Q
     | |||||||| |||| |||||||||||||||||||| || |||||||| |  ||||||||||||||||||||||||| ||| || ||  |||| || ||    
T  42260085 aaaagattatatctgatggagctttgaagaaggaaagagcgtagacaggaagcgaggtcaagacagacttgagaagaatcaaacggcctccaaatgatag 42260184  T
Q  350 aaagcgact 358  Q
    |||||||||    
T  42260185 aaagcgact 42260193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 42 - 331
Target Start/End: Complemental strand, 22094795 - 22094505
Alignment:
Q  42 actaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactccca 141  Q
    |||||||| |||||||| |||||| | |||||||| ||||||| ||||||||| |||||||  |||||| ||||||||||| ||| |||||| || || |    
T  22094795 actaaaactctataccaaaaaccacccctatccactaacatcctccaacaccacttccctagtaaagcaatattaaactccttcaactgtctaaccccta 22094696  T
Q  142 accctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnnt-ttattaaaaatag 240  Q
    |||||||| |||||||| | | |||||||||   |||  | | ||| || ||||||||||  ||||||| ||| ||||         |||||||| | ||    
T  22094695 accctccaaactccttttggagacaaacagaagaccagcctatccaagatattttcctgtgttcctcacccccaccccaaaaaaaaattattaaataaag 22094596  T
Q  241 attcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaa 331  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||  ||||||||||||||    
T  22094595 attcaatggcagagattatacctgacggagctttgaagaaggaaagagcatagacaggcaaagaagtcaagacagctttgagaagaaccaa 22094505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 34481502 - 34481715
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||||| ||| |||| || ||||||||||||||||||||||||||    
T  34481502 ccccaacctccaacctgccacctaactcgccatacctggcggctaaaaccctataccacaacccacctctgtctaccaacatccgccaacaccatttccc 34481601  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    |||||||||  | ||||||||| |||  |  ||||| ||||| || ||||||||||||  |||||||||||  | ||||   | ||| ||||||||||||    
T  34481602 taacaaagctatgttaaactccttcactttcctcacccccaaaccaccatactccttttttaaacaaacagtttgccaacttaaccaagaaattttcctg 34481701  T
Q  201 ttatcctcactccc 214  Q
    ||||||||||||||    
T  34481702 ttatcctcactccc 34481715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 22 - 352
Target Start/End: Original strand, 588082 - 588412
Alignment:
Q  22 ctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactc 121  Q
    ||||||||||||| ||||||||||| ||||||||||| ||||||  |||||| |||| ||||| ||||||||| || ||||||| || | | ||||||||    
T  588082 ctaattcgccatatctggcaactaacaccctataccataaaccacatctatcaaccagcatcctccaacaccactttcctaacatagaagtgttaaactc 588181  T
Q  122 cctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnn 221  Q
    | ||| ||||||||| | ||| |||||||| ||||||    | || | ||  ||| |||  | ||| |  ||||| || | |||||||||||||||||      
T  588182 cttcaactgtctcaccctcaaacctccatattcctttttagagcacaaagtattctaagatatccaagtgatttttctatgatcctcactccctccccaa 588281  T
Q  222 nnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttga 321  Q
          ||||| || | ||||||||||  ||||||||||| | | ||||||||||||||  |||| |||||||||||||  |||||||||||||| || |    
T  588282 aaaaaattattcaatagagattcaatggaagagattatacataatggagctttgaagaaacaaagagcatagacaggcagagaggtcaagacagatttta 588381  T
Q  322 gaagaaccaaccgaccctcaaaagagagaaa 352  Q
    |||| ||||| || ||  | |||||||||||    
T  588382 gaagtaccaagcggccaccgaaagagagaaa 588412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 99 - 297
Target Start/End: Complemental strand, 26261805 - 26261608
Alignment:
Q  99 cctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcc 198  Q
    |||||||||||  | ||||||||||||| ||| || || ||||||| ||||||||| |||| |||||||||||  |||||| | | ||| ||||||||||    
T  26261805 cctaacaaagcggtgttaaactccctcatctgccttacccccaaccatccatactcttttcttaaacaaacagttttccaaccaatccaagaaattttcc 26261706  T
Q  199 tgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacag 297  Q
    | | |||||||||||| ||||        ||||| |||||| |||||||   ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  26261705 tatgatcctcactcccaccccaaaaaaa-ttattcaaaataaattcaatagaagagattatacctgaaggagctttgaagaaggaaagagcatagacag 26261608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 3041264 - 3041332
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3041264 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagatacaaaaaa 3041332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 30 - 298
Target Start/End: Original strand, 33170241 - 33170509
Alignment:
Q  30 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagct 129  Q
    |||||||| || ||||| ||||||  |||||| |||||||| || || |||| || |||||||||||| |||||||||||| |||||||||||||||       
T  33170241 ccatacctagccactaacaccctacgccacaacccatctctctctactaacaacctccaacaccattttcctaacaaagcaatattaaactccctcaaac 33170340  T
Q  130 gtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnnttt 229  Q
      || || |||| ||||||||||||||| |  ||||| | ||| ||||||   | ||| |  ||||| || ||||||||||| || ||||       |||    
T  33170341 tcctaacacccatccctccatactccttcctcaaacataaagaattccaactaatccacgttatttttcttttatcctcacttcccccccaaaaaaattt 33170440  T
Q  230 attaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||| || | ||||||||||  | ||||||||||||||||||||||||| |||||||| |||||||||||    
T  33170441 atttaacaaagattcaatggaatagattatacctgacggagctttgaaaaaggaaagagcatagacagg 33170509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 476814 - 476892
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  476814 accctataccaaaaaccatctctatctaccaacattcgccaacaccatttacctaacaaagcactattaaactccctca 476892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 2984347 - 2984415
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  2984347 gggtcaagatcctctccatttataaattttttcatttgttgtaatttggagagagatagacacataaaa 2984415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 36290720 - 36290652
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  36290720 gggtcaagatcctctccatttataaatttttctatttgttgcaatttggagagagatagacacaaaaaa 36290652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 56 - 296
Target Start/End: Original strand, 10780810 - 10781050
Alignment:
Q  56 ccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcc 155  Q
    |||||||||  | ||||| || |||| |||||||||||||||||| ||||||||| | |||||||| |||| |   ||||| ||||||||||||||||||    
T  10780810 ccacaaacctcccctatcaactaacagccgccaacaccatttccccaacaaagcaatgttaaactctctcaacctcctcacacccaaccctccatactcc 10780909  T
Q  156 tttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagaga 255  Q
     | |  ||||| | |||  ||||| | ||||| ||||| || || ||||||||||  || ||||       |||||| || | |||||||||   |||||    
T  10780910 ctcctcaaacacaaagaactccaaccaacccaagaaatctttcttttatcctcacaacccccccaaaaaaatttatttaacaaagattcaatagaagaga 10781009  T
Q  256 ttatacctgacggagctttgaagaaggaaagggcatagaca 296  Q
    |||||||||||||||||||||| |||||||| |||||||||    
T  10781010 ttatacctgacggagctttgaaaaaggaaagtgcatagaca 10781050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 377
Target Start/End: Complemental strand, 28535074 - 28534886
Alignment:
Q  189 gaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaaggg 288  Q
    |||||||| || |||||||||| |||||| |       ||||||||| | ||||||||||  ||||||||||||||||||||||||||| |||||||| |    
T  28535074 gaaatttttcttttatcctcaccccctcctcaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtg 28534975  T
Q  289 catagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgactttgccaccctgataatcta 377  Q
    |||||||||| |  |  |||| ||| ||||| ||||||| ||| |||||  ||||||| || || ||||||||||| ||||| ||||||    
T  28534974 catagacaggtagagcagtcaggacggacttaagaagaatcaaacgaccaccaaaagaaaggaaccgactttgccaacctgacaatcta 28534886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 27 - 212
Target Start/End: Original strand, 35637715 - 35637899
Alignment:
Q  27 tcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    ||||||||||| ||||| || ||| | ||||| |||||  ||||||| ||||||| || ||||||||| || ||||| || |||  ||| ||||||||||    
T  35637715 tcgccatacctcgcaaccaacaccttgtaccataaacctcctctatcaaccaacaacctccaacaccactttcctaataatgcaaaatttaactccctca 35637814  T
Q  127 gctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactc 212  Q
      || ||||| ||||| ||||||| ||||||||||||||||| ||  |||||||||| ||| || |||||||| ||||||||||||    
T  35637815 attgcctcac-cccaaacctccatgctcctttcgtaaacaaatagtattccaagcgatccatgatattttcctattatcctcactc 35637899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 227 - 379
Target Start/End: Original strand, 42514500 - 42514652
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    ||||||||| | ||||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||| |  |  |||| ||||||||| ||||||    
T  42514500 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 42514599  T
Q  327 accaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctaga 379  Q
    | ||| |||||  | ||||| || || ||||||||||| || || ||||||||    
T  42514600 atcaaacgaccaccgaaagataggaaccgactttgccaaccagacaatctaga 42514652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 51 - 325
Target Start/End: Complemental strand, 22174530 - 22174258
Alignment:
Q  51 ctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccat 150  Q
    |||||||| || ||| ||||||||||||||| || |||||||||| | |||||||||||  | ||||||||| ||| ||| ||||| || |  || ||||    
T  22174530 ctataccataacccacctctatccaccaacaacctccaacaccatctacctaacaaagctatgttaaactccttcaactgcctcacccctagtccaccat 22174431  T
Q  151 actcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgac 250  Q
      || |||   |||||||||| | ||||||| |  || ||||||||| |||||||||||||||||| ||       || |  ||||| ||||||||||      
T  22174430 gttcttttttgaaacaaacagcgctccaagcaatacaagaaattttcatgttatcctcactccctcgccaatttttttaaaaaaaaagagattcaatgga 22174331  T
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaag 325  Q
    ||||||||||||||| ||| | |||||||| ||||  ||||||||||| | ||| |||| |||||| ||||||||    
T  22174330 agagattatacctgatggaaccttgaagaaagaaa--gcatagacaggaattgaagtcatgacagatttgagaag 22174258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 56 - 298
Target Start/End: Complemental strand, 8299713 - 8299471
Alignment:
Q  56 ccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcc 155  Q
    |||||||||  | ||||| || |||| || ||||||||||||||| ||||||||| | |||||||| | || |   || || ||||||||||||||||||    
T  8299713 ccacaaacctcccctatcaactaacagcctccaacaccatttccccaacaaagcaatgttaaactctcgcaacctcctaacacccaaccctccatactcc 8299614  T
Q  156 tttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagaga 255  Q
     | |  || || |||||  ||||| | ||||| ||||| || || ||||||||||  || ||||       ||||||||| | |||||||||   |||||    
T  8299613 ctcctcaagcacacagaactccaaccaacccacgaaatctttcttttatcctcacatcccccccaaaaaaatttattaaacaaagattcaatagaagaga 8299514  T
Q  256 ttatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  8299513 ttatacctgacggagctttgaaaaaggaaagtgcatagacagg 8299471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 21084666 - 21084771
Alignment:
Q  232 taaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaa 331  Q
    |||||||||| |||| |  ||| ||||||||||||||||| |||||||||||||| ||||||||||| |  ||||||||||||||||| ||||| || ||    
T  21084666 taaaaatagaatcaagggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttagaaggactaa 21084765  T
Q  332 ccgacc 337  Q
    ||||||    
T  21084766 ccgacc 21084771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 56 - 298
Target Start/End: Complemental strand, 30731845 - 30731603
Alignment:
Q  56 ccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcc 155  Q
    ||||||| |||| || ||||  |||| || |||||||||||| || ||||||||| | ||||||||||||| |    | |||||||||||||||||||||    
T  30731845 ccacaaagcatccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaactcccaaccctccatactcc 30731746  T
Q  156 tttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagaga 255  Q
    || |  | ||  | ||  | |||    ||||| || ||||| || || ||||||||||||||||       ||||||||| | ||||||||||  |||||    
T  30731745 ttcctcatactcaaagtctcccacctaacccaagatatttttcttttttcctcactccctccccaaaaaaatttattaaacaaagattcaatggaagaga 30731646  T
Q  256 ttatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||| ||||||||||||||||||||| |||||||||||    
T  30731645 ttatacctgtcggagctttgaagaaggaaagtgcatagacagg 30731603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 35122292 - 35122135
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | ||||| ||||||||| | ||| |||||||||  ||||||||| || ||||||||||| ||||||| |||||||||||||||    
T  35122292 cccccacctccaaccttccacctatttcgccataacgggcgactaaaacctgataccacaatccttctctatccactaacatcctccaacaccatttccc 35122193  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactccttt 158  Q
    ||  || |||  |||||||| ||||| |   || || |||||||||||| ||||||||    
T  35122192 tagtaatgcaacattaaacttcctcaacctcctaacccccaaccctccagactccttt 35122135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 330
Target Start/End: Complemental strand, 20208305 - 20207977
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| | ||||| ||||||||||  ||| ||||| || | |||||| ||||||   ||||| || | ||||| ||||||||| || ||    
T  20208305 ccccaacctccaacctcccacctacttcgccatacg-ggcgactaagactcgataccaaaaaccactcctatctactagcatcctccaacaccactttcc 20208207  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    |||||||||   ||| ||||| |||| ||||||||| ||||| || ||| ||||| |  | |  || |||   | |||| | | ||| || ||||||||     
T  20208206 taacaaagccaaattgaactctctcaactgtctcacccccaaaccaccaaactccctgtgaaggcacacatcatgccaacctatccaagatattttccta 20208107  T
Q  201 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    |||||||||||||| ||||       |||| ||| || ||| | ||||  ||||||||||| ||| |||||||||||||||||||| |||||||||||||    
T  20208106 ttatcctcactcccaccccaaaaaaatttaataagaagagaattaatggaagagattatacatgatggagctttgaagaaggaaagcgcatagacaggca 20208007  T
Q  301 atgaggtcaagacagacttgagaagaacca 330  Q
      ||||| | ||||||||| | ||||||||    
T  20208006 gagaggttaggacagactttaaaagaacca 20207977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 171
Target Start/End: Complemental strand, 26262424 - 26262292
Alignment:
Q  39 gcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactc 138  Q
    |||| ||| ||||||||||| |||||  ||||||  || ||||||| |||||||||||| |||||||||||| ||||||||||||||| || ||| |  |    
T  26262424 gcaagtaacaccctataccaaaaacctactctatttactaacatcctccaacaccattttcctaacaaagcagtattaaactccctcatctctcttaacc 26262325  T
Q  139 ccaaccctccatactcctttcgtaaacaaacag 171  Q
     ||||||| |||| ||||||| |||||||||||    
T  26262324 tcaacccttcatattcctttcttaaacaaacag 26262292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 11960546 - 11960614
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||||| ||||||    
T  11960546 gggtcaagatcctctccatttataaatttttctatttgttacaatttagagagagatagacaaaaaaaa 11960614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 227 - 379
Target Start/End: Original strand, 23239163 - 23239315
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    ||||||||| | ||||||||||  ||||||||||||||||||||||||||| |||||||| ||||||||||| |  |  |||| ||| ||||| ||||||    
T  23239163 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaaga 23239262  T
Q  327 accaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctaga 379  Q
    | | | |||||  | ||||| || || ||||||||||| || || ||||||||    
T  23239263 atcgaacgaccaccgaaagaaaggaaccgactttgccaaccagacaatctaga 23239315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 441 - 504
Target Start/End: Original strand, 40162666 - 40162729
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||||||    
T  40162666 gggtcaagatcctctccatttataactttttctatttgttgcaatttgaagagagatagacaca 40162729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 38358021 - 38358320
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | ||||| ||||||||| | ||| ||||||| |  |||||||||  | |||||||| || ||||||| |||||||||||| ||    
T  38358021 cccccacctccaacctcccacctacttcgccataacgggcgactaaaatctgataccacaactcttctctatcaactaacatcctccaacaccatttacc 38358120  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    ||  |||||| ||||||||||| |||     || || ||||| |||||| ||||||||    |||| | ||| | |||| | | ||| | |||||| ||     
T  38358121 tagtaaagcaatattaaactccttcaatctcctaacccccaaacctccaaactcctttttagaacataaagaatcccaacctatccaagtaatttttcta 38358220  T
Q  201 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
      |||||||||||| ||||        ||||| || | ||||||||||  ||||||||||||||  |||||||||||||| ||||| |||||||||||||    
T  38358221 caatcctcactcccaccccagaaaaaattattcaataaagattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatagacaggca 38358320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 446 - 507
Target Start/End: Complemental strand, 8675134 - 8675073
Alignment:
Q  446 aagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaa 507  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  |||| ||||||||    
T  8675134 aagatcctctccatttataacttttttcatttgttgcaatttggagattgatacacacaaaa 8675073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 158
Target Start/End: Original strand, 31864797 - 31864945
Alignment:
Q  10 ccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagc 109  Q
    ||||||| | ||||| ||||||||| ||||  | ||||||||||||||| || ||  |||||||||| ||||||| |||||||||||| ||||||| |      
T  31864797 ccaacctcccacctatttcgccatagctggtgattaaaaccctataccataagcctcctctatccactaacatcctccaacaccatttacctaacataat 31864896  T
Q  110 actattaaactccctcagctgtctcactcccaaccctccatactccttt 158  Q
    | ||||||||||| |||  |||| ||| | || |||||||||| |||||    
T  31864897 aatattaaactccttcaattgtcccaccctcagccctccatacaccttt 31864945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 6050048 - 6050123
Alignment:
Q  255 attatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 330  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||  |||||||  |||||||| | ||||||||    
T  6050048 attatacctgatggagctttgaagaaggaaagcgcatagacaggcagcgaggtcagaacagactttaaaagaacca 6050123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 27796276 - 27796335
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  27796276 agattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 27796335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 201 - 337
Target Start/End: Complemental strand, 35983177 - 35983041
Alignment:
Q  201 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    |||||||||| ||||||||       ||||||||| | ||||||||||  | |||||||||||||| |||||||||| |||||||| ||||||||||| |    
T  35983177 ttatcctcaccccctccccaaaaaattttattaaacaaagattcaatggaaaagattatacctgacagagctttgaaaaaggaaagtgcatagacaggta 35983078  T
Q  301 atgaggtcaagacagacttgagaagaaccaaccgacc 337  Q
      |  |||| ||||||||| ||||||| ||| |||||    
T  35983077 gagcagtcaggacagacttaagaagaatcaaacgacc 35983041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 233 - 328
Target Start/End: Original strand, 41590875 - 41590970
Alignment:
Q  233 aaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 328  Q
    ||||||||| |||| |  ||| ||||||||||||||||| |||||||||||||| | ||||||||| |  ||||||||||||||||| || |||||    
T  41590875 aaaaatagaatcaagggaagaaattatacctgacggagccttgaagaaggaaagagtatagacaggtagagaggtcaagacagactttaggagaac 41590970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 462 - 509
Target Start/End: Complemental strand, 41660203 - 41660156
Alignment:
Q  462 ataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  41660203 ataaatttttccatttgttgcaatttggagagagatagacacaaaaaa 41660156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 364
Target Start/End: Original strand, 36256562 - 36256692
Alignment:
Q  234 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 333  Q
    |||||||| || |||  |||||||  |||||  ||||| |||||||||||||| ||||||||||| |  | ||||||||||||||| | ||||| ||| |    
T  36256562 aaaatagaatctatggaagagattgcacctgttggagccttgaagaaggaaagagcatagacaggtagcgcggtcaagacagactttaaaagaatcaagc 36256661  T
Q  334 gaccctcaaaagagagaaagcgactttgcca 364  Q
    ||||  ||||||| ||||| |||||||||||    
T  36256662 gacctccaaaagaaagaaaccgactttgcca 36256692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 334
Target Start/End: Complemental strand, 4297663 - 4297562
Alignment:
Q  233 aaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaac 332  Q
    ||||||||| |||| |  ||| ||||||||||||||||  |||||||||||||| ||||||||||| |  |||||||||| |||||| || ||||| |||    
T  4297663 aaaaatagaatcaagggaagaaattatacctgacggagtcttgaagaaggaaagagcatagacaggtagagaggtcaagatagactttaggagaactaac 4297564  T
Q  333 cg 334  Q
    ||    
T  4297563 cg 4297562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 298
Target Start/End: Complemental strand, 25856938 - 25856728
Alignment:
Q  88 aacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgaccca 187  Q
    ||||||||||||| ||||||||| | |||||||| | || |   || || |||||||||||||||||| | |  || || |||||  ||||  | |||||    
T  25856938 aacaccatttccccaacaaagcaatgttaaactctcgcaacctcctaacacccaaccctccatactccctcctcaagcacacagaactccacccaaccca 25856839  T
Q  188 ggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagg 287  Q
     ||||| || || ||||||||||  || ||||       ||||||||| | ||||| |||   ||||||||||||||||||||||||||| ||||||||     
T  25856838 cgaaatctttcttttatcctcacatcccccccaaaaaaatttattaaacaaagatttaatataagagattatacctgacggagctttgaaaaaggaaagt 25856739  T
Q  288 gcatagacagg 298  Q
    |||||||||||    
T  25856738 gcatagacagg 25856728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 35122036 - 35121975
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    ||||||||||  ||||||||||||||| |||||||| ||||||||||| |||||||||||||    
T  35122036 agattcaatggaagagattatacctgaaggagctttaaagaaggaaagagcatagacaggca 35121975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 10 - 158
Target Start/End: Original strand, 31864352 - 31864500
Alignment:
Q  10 ccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagc 109  Q
    ||||||| | ||||| ||||||||| ||||  | |||||| |||||||| || ||  |||||||||| ||||||| |||||||||||| || |||| | |    
T  31864352 ccaacctcccacctatttcgccatagctggtgattaaaacactataccataagcctcctctatccactaacatcctccaacaccatttacccaacataac 31864451  T
Q  110 actattaaactccctcagctgtctcactcccaaccctccatactccttt 158  Q
    | ||||||||||| |||  |||| ||| | || |||||||||| |||||    
T  31864452 aatattaaactccttcaattgtcccaccctcagccctccatacaccttt 31864500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 449 - 509
Target Start/End: Complemental strand, 40162840 - 40162780
Alignment:
Q  449 atcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||| |||||| |||||||| |||||||| ||||||||||| ||||||    
T  40162840 atcctctccatttataactttttttatttgttgtaatttggaaagagatagacaaaaaaaa 40162780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 309
Target Start/End: Complemental strand, 15862042 - 15861963
Alignment:
Q  230 attaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 309  Q
    |||||| | ||||||||||  |||||| |||||||||| | |||||||||| ||||| ||| ||||||||||||||||||    
T  15862042 attaaataaagattcaatggaagagataatacctgacgaatctttgaagaaagaaagagcacagacaggcaatgaggtca 15861963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 337
Target Start/End: Original strand, 19838368 - 19838455
Alignment:
Q  251 agagattatacctgacggagcttt-gaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacc 337  Q
    ||||||| |||||| | ||||||| ||||||||||||  ||||||||||||| || |||| ||||||||||||||||| ||| |||||    
T  19838368 agagattgtacctgtcagagcttttgaagaaggaaagaacatagacaggcaaagaagtcaggacagacttgagaagaatcaaacgacc 19838455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 170
Target Start/End: Complemental strand, 26262979 - 26262848
Alignment:
Q  39 gcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactc 138  Q
    |||||||| ||||||||| | |||||  ||||||  || ||||||| |||| ||||||| ||||||||||||  |||||||||||||| ||  || || |    
T  26262979 gcaactaacaccctatacaaaaaacctactctatttactaacatcctccaataccattttcctaacaaagcaggattaaactccctcatctcccttaccc 26262880  T
Q  139 ccaaccctccatactcctttcgtaaacaaaca 170  Q
     ||||||| || | ||||||| ||||||||||    
T  26262879 tcaacccttcacattcctttcttaaacaaaca 26262848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 379
Target Start/End: Complemental strand, 30509382 - 30509231
Alignment:
Q  228 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 327  Q
    |||||||| | ||| ||||||  ||||||||||||||  |||||||| ||||||||||| |||||||||||||  || ||||| || |  || ||||| |    
T  30509382 ttattaaacaaagaatcaatggaagagattatacctgttggagctttaaagaaggaaagagcatagacaggcagagaagtcaacacggctttcagaagga 30509283  T
Q  328 ccaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctaga 379  Q
     ||| |||||  ||||||||||||| || || | |||||| || ||||||||    
T  30509282 tcaagcgaccaccaaaagagagaaaccggctattccaccccgacaatctaga 30509231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 158
Target Start/End: Complemental strand, 30509607 - 30509476
Alignment:
Q  27 tcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||| | ||| |||||||||  ||||||||| ||||||||||| || |||| || ||||||||||||||||| ||||||   |||||| ||| |||    
T  30509607 tcgccataacgggcgactaaaacctgataccacaagccatctctatctactaacaacctccaacaccatttccctagcaaagctacattaaattccttca 30509508  T
Q  127 gctgtctcactcccaaccctccatactccttt 158  Q
     ||  || || |||||||||||  ||||||||    
T  30509507 acttcctaacccccaaccctcctaactccttt 30509476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 379
Target Start/End: Complemental strand, 30549725 - 30549574
Alignment:
Q  228 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 327  Q
    |||||||| | ||| ||||||  ||||||||||||||  |||||||| ||||||||||| |||||||||||||  || ||||| || |  || ||||| |    
T  30549725 ttattaaacaaagaatcaatggaagagattatacctgttggagctttaaagaaggaaagagcatagacaggcagagaagtcaacacggctttcagaagga 30549626  T
Q  328 ccaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctaga 379  Q
     ||| |||||  ||||||||||||| || || | |||||| || ||||||||    
T  30549625 tcaagcgaccaccaaaagagagaaaccggctattccaccccgacaatctaga 30549574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 158
Target Start/End: Complemental strand, 30549947 - 30549816
Alignment:
Q  27 tcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||| | ||| |||||||||  ||||||||| ||||||||||| || |||| || ||||||||||||||||| ||||||   |||||| ||| |||    
T  30549947 tcgccataacgggcgactaaaacctgataccacaagccatctctatctactaacaacctccaacaccatttccctagcaaagctacattaaattccttca 30549848  T
Q  127 gctgtctcactcccaaccctccatactccttt 158  Q
     ||  || || |||||||||||  ||||||||    
T  30549847 acttcctaacccccaaccctcctaactccttt 30549816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 257 - 331
Target Start/End: Complemental strand, 10486232 - 10486158
Alignment:
Q  257 tatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaa 331  Q
    ||||||||| |||||||||||||| |||| ||||||||||||||  || ||||||||||| || | |||||||||    
T  10486232 tatacctgatggagctttgaagaaagaaatggcatagacaggcagagaagtcaagacagattttaaaagaaccaa 10486158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 19506790 - 19506852
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 301  Q
    ||||||||||  ||||||||||||||| |||||||| ||||||||||| ||||||||| ||||    
T  19506790 agattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacaagcaa 19506852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 29572206 - 29572148
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 309  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||||||||  |||||||    
T  29572206 agagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtca 29572148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 29573583 - 29573525
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 309  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||||||||  |||||||    
T  29573583 agagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtca 29573525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 29574960 - 29574902
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 309  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||||||||  |||||||    
T  29574960 agagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtca 29574902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 29576337 - 29576279
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 309  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||||||||  |||||||    
T  29576337 agagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtca 29576279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 29577714 - 29577656
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 309  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||||||||  |||||||    
T  29577714 agagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtca 29577656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 29579091 - 29579033
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 309  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||||||||  |||||||    
T  29579091 agagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtca 29579033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 22437998 - 22438067
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagaca 296  Q
    ||||||||| |||||||||||   ||||||||||||||| |||||| ||||||||||||  |||||||||    
T  22437998 tttattaaacatagattcaatataagagattatacctgagggagctatgaagaaggaaaaagcatagaca 22438067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 26263487 - 26263407
Alignment:
Q  86 ccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaaca 166  Q
    |||||||||||| |||||||||||| ||||||||||||||| ||  || || ||||||||| |||| ||| ||| ||||||    
T  26263487 ccaacaccattttcctaacaaagcagtattaaactccctcatctcacttacccccaacccttcatattccgttcttaaaca 26263407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 36290529 - 36290596
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||| |||||||||||||||||||||||||||||||| | |||| |||||| | ||||||| ||||    
T  36290529 gggtcaatatcctctccatttataaattttttcatttgtt-ccatttagagagataaagacacataaaa 36290596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 3581016 - 3580884
Alignment:
Q  164 acaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacct 263  Q
    |||||||||||||||  | ||||| | ||||||||| |||||||||| ||| ||||       |||| ||| ||||||||| |||  |||||||||||||    
T  3581016 acaaacagagttccagtcaacccaagcaattttcctattatcctcacccccaccccaaatttttttaataagaatagattcgatggaagagattatacct 3580917  T
Q  264 gacggagctttgaagaaggaaagggcatagaca 296  Q
       |||||| |||| ||||| ||||||||||||    
T  3580916 acgggagctctgaaaaaggatagggcatagaca 3580884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 491
Target Start/End: Complemental strand, 2883825 - 2883775
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggag 491  Q
    |||| |||||||||||||||||| | |||||||||||||||||||| ||||    
T  2883825 gggttaagatcctctccatttattacttttttcatttgttgcaattaggag 2883775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 6885717 - 6885759
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatag 293  Q
    ||||||||||||||| |||||||||||||||||||| ||||||    
T  6885717 agagattatacctgatggagctttgaagaaggaaagagcatag 6885759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 452 - 509
Target Start/End: Complemental strand, 31110342 - 31110285
Alignment:
Q  452 ctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||||| ||||||||||||||| |  |||||| ||| ||||||    
T  31110342 ctctccatttataaatttttttatttgttgcaatttgaatggagataaacaaaaaaaa 31110285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 386
Target Start/End: Complemental strand, 33385299 - 33385174
Alignment:
Q  261 cctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgacttt 360  Q
    ||||||||||||||||| |||||||| ||||||||||| |  |  ||||||||||| |||||||| | ||| |||||  |||| || ||  | | ||| |    
T  33385299 cctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagatttgagaagtatcaagcgaccaccaaaggaaaggtacctactat 33385200  T
Q  361 gccaccctgataatctagactttata 386  Q
    |||| || || |||||||||||||||    
T  33385199 gccaaccagacaatctagactttata 33385174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 19513051 - 19512947
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | ||| |  |||||||| | ||| || | ||| ||||||||||||||  || |||| |||||||||| |||||||||||| ||    
T  19513051 cccccacctccaacctcccaccaacctcgccataacgggcgacaagaacactataccacaaacctactttatcgaccaacatcctccaacaccatttacc 19512952  T
Q  101 taaca 105  Q
    |||||    
T  19512951 taaca 19512947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 22437817 - 22437872
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaa 103  Q
    |||||||||||||||||||||||||| || ||||||| ||| | |||||| |||||    
T  22437817 accctataccacaaaccatctctatctactaacatcctccagccccatttacctaa 22437872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 27796103 - 27796157
Alignment:
Q  66 tctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaact 120  Q
    |||||||| || |||| |||||||||||||||||||| ||||||| | |||||||    
T  27796103 tctctatcaactaacaaccgccaacaccatttccctagcaaagcaatgttaaact 27796157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 28455889 - 28455943
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttcccta 102  Q
    |||||||| ||||| |||||| |||| |||||||||| |||||||||||| ||||    
T  28455889 accctatatcacaacccatctttatcaaccaacatcctccaacaccatttaccta 28455943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 449 - 509
Target Start/End: Original strand, 2883129 - 2883189
Alignment:
Q  449 atcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||| ||||| ||||| ||| ||||| |||||||| | ||| ||||||    
T  2883129 atcctctccatttataattttttccatttattgtaatttagagagagaaaaacataaaaaa 2883189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 3041455 - 3041388
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||| || |||| |||||||||||||||||||||||| | |||| |||||| | ||||||| ||||    
T  3041455 gggtcaatattctcttcatttataaattttttcatttgtt-ccatttagagagataaagacacataaaa 3041388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 166; Significance: 1e-88; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 48 - 266
Target Start/End: Complemental strand, 34148 - 33930
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| ||||||||||| || |||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34148 accctataccaaaaaccatctctctctaccaacattcgccaacaccttttacctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 34049  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  34048 catactccttttgtaaacaaacagagttccaagcgacctaggaaattttcctgttatcctcactccctccccaaaaaaatttattaaaaatagattcaat 33949  T
Q  248 gacagagattatacctgac 266  Q
    |||||||||||||||||||    
T  33948 gacagagattatacctgac 33930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 3e-80; HSPs: 88)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 48 - 335
Target Start/End: Complemental strand, 43516287 - 43516000
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| |||||| |||||||| |||||||| ||||||||||||| |||||||||||||||||||| |||  || ||  ||||| ||||||||||    
T  43516287 accctataccataaaccacctctatccgccaacatctgccaacaccatttacctaacaaagcactattaaattcctgcaacttcctcacccccaaccctc 43516188  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntt-tattaaaaatagattcaa 246  Q
    |||||||||| ||||| ||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||       || ||||||||||||||||||    
T  43516187 catactccttacgtaagcaaacagagctccaagcaacccaggaaattttcctgttatcc-cactccctccccaatttttttatattaaaaatagattcaa 43516089  T
Q  247 tgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccga 335  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||||| ||||  |||| ||||||||| ||||| |||||||||    
T  43516088 tgacagagattatacctgatggagccttgaagaaggaaagagcatagacaggtaatgcagtcaggacagactttagaaggaccaaccga 43516000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 358
Target Start/End: Complemental strand, 23873062 - 23872706
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| ||    
T  23873062 ccccaacctccaacctgccacctaattcgccatacctggcgactaaaacccgataccacaaaccacctctatctaccaacatccgccaacaccattttcc 23872963  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    |||||||||   |||||||||| |||  |  |  || ||||| || ||||||||||||  |||||||||||  | ||||   | ||| |||||||||||     
T  23872962 taacaaagctaaattaaactccttcaatttccgtacccccaaaccgccatactccttttttaaacaaacagtttgccaacttaaccaagaaattttccta 23872863  T
Q  201 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    |||||||||||||| ||||        ||| |||| | ||| |||||    |||||||||||||  |||||||||||||||||||| |||||||||||||    
T  23872862 ttatcctcactccc-ccccaaaaaaaattaataaacaaagaatcaatagaggagattatacctgctggagctttgaagaaggaaagtgcatagacaggca 23872764  T
Q  301 atgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgact 358  Q
      |||||||||||||| ||||| |||||||| |||||  ||||||||||||| |||||    
T  23872763 gagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaaaccgact 23872706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 48 - 418
Target Start/End: Original strand, 2072141 - 2072511
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    |||||||||||||  ||  ||||||||||||||||| |||| |||||||| ||||| |||||| |||||||  |||||| ||||||||  |||||  |||    
T  2072141 accctataccacatccctcctctatccaccaacatctgccatcaccatttacctaataaagcaatattaaatcccctcaactgtctcaaccccaaatctc 2072240  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    ||||||| |  ||||||  || |||| ||||||||| |||| |||||||| |||| ||||| ||||||||||       |||   ||||||||| |||||    
T  2072241 catactcttgacgtaaagtaatagagctccaagcgatccagtaaattttcatgttgtcctcgctccctccccaattttttttgaaaaaaatagagtcaat 2072340  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagag 347  Q
    || |||||||||| ||||||||||||||||||| ||||| ||||||||| |||  ||||||| |||| | ||||||||||||||||| ||  | || |||    
T  2072341 gaaagagattatatctgacggagctttgaagaaagaaagagcatagacatgcagagaggtcatgacaaatttgagaagaaccaaccggcctccgaaggag 2072440  T
Q  348 agaaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggctaacct 418  Q
    ||||| |||||||||||||| |||| ||||||||| || || ||||  ||  |||||||||| ||||||||    
T  2072441 agaaaacgactttgccaccccgatagtctagacttaatggtattcacaacgggttcccaaaaagctaacct 2072511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 379
Target Start/End: Original strand, 55299166 - 55299553
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  55299166 ccccaacctccaacctgccacctaattcgccatacctggcgactaaaacccgataccacaaaccacctctatccaccaacatccgccaacaccattttcc 55299265  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    |||||||||   |||||||||| |||  |  | ||| ||||| || ||| ||||||||  |||||||||||  | ||||   | ||| |||||||||||     
T  55299266 taacaaagctaaattaaactccttcaatttccgcacccccaaaccgccacactccttttttaaacaaacagtttgccaacttaaccaagaaattttccta 55299365  T
Q  201 ttatcctcactccctcccc---------nnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcat 291  Q
    |||||||||||||| ||||                 ||| |||| | ||| |||||    |||||||||||||  |||||||||||||||||||| ||||    
T  55299366 ttatcctcactccccccccccccccccaaaaaaaaattaataaacaaagaatcaatagaggagattatacctgttggagctttgaagaaggaaagtgcat 55299465  T
Q  292 agacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctaga 379  Q
    |||||||||  |||||||||||||| ||||| |||||||| |||||  ||||||||||||| ||||| | ||| || || ||||||||    
T  55299466 agacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaaaccgactattccaacccgacaatctaga 55299553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 10 - 158
Target Start/End: Complemental strand, 3129566 - 3129418
Alignment:
Q  10 ccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagc 109  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3129566 ccaacctgccacctaattcgccatacctgacaactaaaaccctataccacaaaccacctctatccaccaacatccgccaacaccatttccctaacaaagc 3129467  T
Q  110 actattaaactccctcagctgtctcactcccaaccctccatactccttt 158  Q
    | |||||||||||  |||||||||||| ||||| ||||||| |||||||    
T  3129466 attattaaactcctgcagctgtctcacccccaaacctccatgctccttt 3129418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 19114990 - 19115347
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| | || || ||||||||| |  || |||||||| |||||||| || ||| | |||||||| |||| || |||||||||||||||    
T  19114990 ccccaacctccaacctcccacatacttcgccataacgagcgactaaaactctataccaaaatccacccctatccactaacaacctccaacaccatttccc 19115089  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    ||| |||||| ||||||||||| ||| |||||| || || ||||||||| |||||||| | | |||||||||  ||||||| | ||| || ||||||||     
T  19115090 taataaagcaatattaaactccttcaactgtctaacccctaaccctccaaactccttttggagacaaacagaactccaagctatccaagatattttccta 19115189  T
Q  201 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
      |||||||| ||| ||||        |||||||| | ||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  19115190 caatcctcacccccaccccaaaaaaaattattaaataaagattcaatggtagagattatacctgacggagctttgaagaaggaaagtgcatagacagaca 19115289  T
Q  301 atgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgact 358  Q
      || ||||||||||  |||||||||||||| || ||  |||||||||| || |||||    
T  19115290 gagaagtcaagacagctttgagaagaaccaagcggccaccaaaagagaggaaacgact 19115347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 42 - 331
Target Start/End: Original strand, 8935669 - 8935958
Alignment:
Q  42 actaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactccca 141  Q
    |||||||| |||||||| |||||| | |||||||| ||||||| |||||||||||||||||  || ||| ||||||||||| ||| |||||| || || |    
T  8935669 actaaaactctataccaaaaaccacccctatccactaacatcctccaacaccatttccctagtaaggcaatattaaactccttcaactgtctaaccccta 8935768  T
Q  142 accctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaataga 241  Q
    |||||||| |||||||| | | |||||||||  ||||| | | | | || |||||||||| |||||||||||  |||         |||||||| | | |    
T  8935769 accctccaaactccttttggagacaaacagaactccaatctatctaagacattttcctgtgatcctcactccaccccaaaaaaaaattattaaataaaaa 8935868  T
Q  242 ttcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaa 331  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||  |||||||| ||||| ||||||||||||||    
T  8935869 ttcaatggcagagattatacctgacggagctttgaagaaggaaagagcatagacagacagagaggtcaacacagatttgagaagaaccaa 8935958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 5 - 316
Target Start/End: Complemental strand, 7662890 - 7662579
Alignment:
Q  5 aacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaac 104  Q
    ||||||||| |||| |||||||||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||||||||||||| ||||||    
T  7662890 aacctccaatctgccacctaattcgccatacctagcaactaagacactataccacaaaccacctctgtccaccaacatccgccaacaccatttacctaac 7662791  T
Q  105 aaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttat 204  Q
    |||||||||||||| ||| ||| ||||||||| ||||| ||||||| |||||||    ||||||||   |||||  | | ||| | |||||| || | ||    
T  7662790 aaagcactattaaattccttcaactgtctcacccccaaacctccattctcctttgtggaacaaacaattttccagcctatccaagtaatttttctatgat 7662691  T
Q  205 cctcac-tccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatg 303  Q
    |||||| ||||| |||        | |||||| | |||||||| |  ||| ||||||||||| |||||||||||||| ||||||||||||||||| |  |    
T  7662690 cctcacatccct-cccaaaaaaaatgattaaataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagag 7662592  T
Q  304 aggtcaagacaga 316  Q
    | |||||||||||    
T  7662591 aagtcaagacaga 7662579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 48 - 379
Target Start/End: Original strand, 9691023 - 9691355
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| || |||  |||||||||||||| || |||||||||||| || ||||| |    |||||| |||||||  || ||||| ||||  ||||    
T  9691023 accctataccaaaacccacatctatccaccaacaacctccaacaccatttacccaacaaggttaaattaaattccctcaagtgcctcacccccagacctc 9691122  T
Q  148 catactcctttcgt-aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaa 246  Q
    |  ||||||||  | ||||||| |||| ||||||| |  |||| |||||| |||||||||||||| || ||||       |||  |||||||||||||||    
T  9691123 ctaactcctttttttaaacaaatagagctccaagcaattcagggaatttttctgttatcctcactaccaccccaaattttttttgtaaaaatagattcaa 9691222  T
Q  247 tgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaaga 346  Q
     || |||||||||||||||| || |||||||||||||||| ||||| ||||| |  || || | |||||||||||||||||| |||||||||||||| ||    
T  9691223 agatagagattatacctgacagaactttgaagaaggaaagagcataaacaggaagcgaagtaaggacagacttgagaagaactaaccgaccctcaaagga 9691322  T
Q  347 gagaaagcgactttgccaccctgataatctaga 379  Q
     ||||| |||||||||||||| |||||||||||    
T  9691323 tagaaaacgactttgccaccccgataatctaga 9691355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 20675576 - 20675789
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||    
T  20675576 ccccaacctccaacctgccacctatttcgccatacctggcgactaaaaccctataccacaaaccacctctgtccaccaacatccgccaacaccattttcc 20675675  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    |||||||||   |||||||||| |||  |  | ||| ||||| || ||| |||| |||  |||||||||||  | ||||   | ||| |||||||||||     
T  20675676 taacaaagctaaattaaactccttcaatttccgcacccccaaaccaccaaactctttttttaaacaaacagtttgccaacataaccaagaaattttccta 20675775  T
Q  201 ttatcctcactccc 214  Q
    ||||||||||||||    
T  20675776 ttatcctcactccc 20675789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 27 - 386
Target Start/End: Original strand, 19648282 - 19648634
Alignment:
Q  27 tcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||| | ||| |||||||| |||||||| |||||| | |||||||| ||||||| |||||||||||||||||  || |||  |||||||||| |||    
T  19648282 tcgccataacaggcgactaaaactctataccaaaaaccacccctatccactaacatcctccaacaccatttccctagtaaggcaacattaaactccttca 19648381  T
Q  127 gctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnn 226  Q
     ||||||       ||||||||| |||||||  | | ||||| |||||||||| | | ||| || |||||||| | |||||||||||| ||||           
T  19648382 actgtct-------aaccctccaaactccttctggagacaaatagagttccaacctatccaagacattttcctatgatcctcactcccaccccaaaaaaa 19648474  T
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
     |||||||| | |||||||| |  ||| |||||||||||||||||||||||||| ||||| ||||||||||| |  |||||||| ||||| |||||||||    
T  19648475 attattaaataaagattcaagggtagaaattatacctgacggagctttgaagaaagaaagagcatagacaggtagagaggtcaacacagatttgagaaga 19648574  T
Q  327 accaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctagactttata 386  Q
    ||||| || ||  |||||||||| || ||||| | ||| ||||| | |||||| ||||||    
T  19648575 accaaacggccagcaaaagagaggaaacgactattccaacctgacactctagattttata 19648634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 2631956 - 2632058
Alignment:
Q  5 aacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaac 104  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||||||||||||||||||||||||||||||    
T  2631956 aacctccaacctgccacctaattcgccatacctggcaactaaaaccctataccacaaaccacccttgtccaccaacatccgccaacaccatttccctaac 2632055  T
Q  105 aaa 107  Q
    |||    
T  2632056 aaa 2632058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 144 - 346
Target Start/End: Complemental strand, 29553244 - 29553042
Alignment:
Q  144 cctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagatt 243  Q
    ||||||||||||||| | | ||||||| |  ||||| | | ||| || ||||||||||  ||||||| ||| ||||       ||||||||| | |||||    
T  29553244 cctccatactccttttggagacaaacataactccaacctatccaagagattttcctgtgttcctcacccccaccccaaaaaaatttattaaataaagatt 29553145  T
Q  244 caatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaa 343  Q
    |||||  |||||||||||||||||||||||||||||||||||| |||||||||||||  || ||||||||||  |||||||||||||| |||||  ||||    
T  29553144 caatggaagagattatacctgacggagctttgaagaaggaaagagcatagacaggcagagaagtcaagacagctttgagaagaaccaaacgaccaccaaa 29553045  T
Q  344 aga 346  Q
    |||    
T  29553044 aga 29553042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 56269033 - 56269101
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56269033 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 56269101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 437 - 509
Target Start/End: Original strand, 36688141 - 36688213
Alignment:
Q  437 agaagggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  36688141 agaagggtcaagatcctctccatttataaatttctccatttgttgcaatttggagagagatagacacaaaaaa 36688213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 42010235 - 42010167
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42010235 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagatacaaaaaa 42010167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 30 - 298
Target Start/End: Complemental strand, 55725263 - 55724996
Alignment:
Q  30 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagct 129  Q
    |||||||| || || || ||||||||||| || ||||||||||| || |||| || |||||||||||||||||||||||||   |||||||| |||| |     
T  55725263 ccatacctagccaccaacaccctataccataatccatctctatctactaacaacctccaacaccatttccctaacaaagcaaagttaaactctctcaacc 55725164  T
Q  130 gtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnnttt 229  Q
      || || |||||||||||||||||| | |  ||||| | ||| |||||| | | ||| |||||||| || || |||||||| || ||||       |||    
T  55725163 tcctaacacccaaccctccatactccctcctcaaacacaaagaattccaaccaatccaagaaatttttcttttttcctcactacc-ccccaaaaaaattt 55725065  T
Q  230 attaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||| || | ||||||||||  |||||||||||| |||||||||||||| ||||||||  ||||||||||    
T  55725064 atttaacaaagattcaatggaagagattatacccgacggagctttgaaaaaggaaagaacatagacagg 55724996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 1015811 - 1015879
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1015811 gggttaagatcctctccatttataaattttttcatttgttgcaatttagagagagatagacacaaaaaa 1015879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 5524565 - 5524497
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  5524565 gggtcaagatcctctccatttataaatttttccatttgttgcaatttggagagagatagacataaaaaa 5524497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 47834682 - 47834614
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  47834682 gggtcaagatcctctccatttataaatttttccatttgttgcaatttggagagagataggcacaaaaaa 47834614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 56 - 379
Target Start/End: Complemental strand, 23642122 - 23641799
Alignment:
Q  56 ccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcc 155  Q
    ||||||| |||| || ||||  |||| || |||||||||||| || ||||||||| | ||||||||||||| |    | || ||||||||||||||||||    
T  23642122 ccacaaagcatccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactcc 23642023  T
Q  156 tttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagaga 255  Q
    || |  | ||  | ||| | |||    ||||| || ||||| || || ||||||| ||||||||       ||||||||| | ||||||||||  |||||    
T  23642022 ttcctcatactcaaagaatcccacctaacccaagatatttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagaga 23641923  T
Q  256 ttatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcg 355  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| |  |  |||| ||||||||| ||||||| ||| |||||  | ||||| || || ||    
T  23641922 ttatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccg 23641823  T
Q  356 actttgccaccctgataatctaga 379  Q
    ||||||||| || || ||||||||    
T  23641822 actttgccaaccagacaatctaga 23641799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 5361544 - 5361476
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5361544 gggtcaaaatcctcttcatttataaatttttccatttgttgcaatttggagagagatagacacaaaaaa 5361476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 440 - 504
Target Start/End: Original strand, 46238902 - 46238966
Alignment:
Q  440 agggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  46238902 agggtcaagatcctctccatttataactttttccatttgttgcaatttggagagagatagacaca 46238966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 39 - 379
Target Start/End: Original strand, 2365598 - 2365937
Alignment:
Q  39 gcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactc 138  Q
    ||||| || ||||||||||| |||||  ||||||| || ||||||| ||| ||||||||  |||| |||||| |||||||||| |||| ||  || || |    
T  2365598 gcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaaccc 2365697  T
Q  139 ccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaat 238  Q
    |||| | ||||| ||||||   ||||||||||   |||||| | | ||| ||||||||||| |  |||||||||||||||         ||||| ||||     
T  2365698 ccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccctcccaaaaaaaaattatttaaaag 2365797  T
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 338  Q
    ||| |||||   |||||||||||||||| ||| |||||| ||||| ||  |||||||||| || || |||||||||||||| || | |||||| |||||     
T  2365798 agactcaatagaagagattatacctgacagag-tttgaaaaaggagagaacatagacaggtaaggaagtcaagacagacttaaggataaccaatcgacca 2365896  T
Q  339 tcaaaagagagaaagcgactttgccaccctgataatctaga 379  Q
     ||||||| ||||| ||||| | ||| || || ||||||||    
T  2365897 ccaaaagacagaaaacgactcttccaaccagacaatctaga 2365937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 441 - 504
Target Start/End: Original strand, 53526025 - 53526088
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  53526025 gggtcaagatcctctccatttataactttttccatttgttgcaatttggagagagatagacaca 53526088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 358
Target Start/End: Original strand, 20675840 - 20675946
Alignment:
Q  252 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaa 351  Q
    |||||||||||||  |||||||||||||| ||||| |||||||||||||  |||||||||||||| ||||| |||||||| |||||  ||||||||| ||    
T  20675840 gagattatacctgctggagctttgaagaatgaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagaaaa 20675939  T
Q  352 agcgact 358  Q
    | |||||    
T  20675940 accgact 20675946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 443 - 504
Target Start/End: Original strand, 28405263 - 28405324
Alignment:
Q  443 gtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28405263 gtcaagattctctccatttataatttttttcatttgttgcaatttggagagagatagacaca 28405324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 83 - 325
Target Start/End: Original strand, 38296342 - 38296583
Alignment:
Q  83 ccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcg 182  Q
    ||||||||||||||||||||| || ||   |||||||||||||| |   | ||||||||| || ||||||||| | |   |||||| |||| |||||  |    
T  38296342 ccgccaacaccatttccctaataacgcctcattaaactccctcaacctccgcactcccaaaccaccatactccctcctagaacaaatagaggtccaattg 38296441  T
Q  183 acccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaagg 282  Q
    ||||| ||||||||  ||| ||||| ||  || ||||       ||||  ||||||||||||||||  | | ||||||||||||||||| ||||||||||    
T  38296442 acccaagaaatttttttgtgatccttacaacc-ccccaaaaaaatttagaaaaaatagattcaatggaaaaaattatacctgacggagccttgaagaagg 38296540  T
Q  283 aaagggcatagacaggcaatgaggtcaagacagacttgagaag 325  Q
    |||| ||||||||||| |  |||||||| ||||||||||||||    
T  38296541 aaagagcatagacaggtagagaggtcaaaacagacttgagaag 38296583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 227 - 379
Target Start/End: Complemental strand, 1827900 - 1827748
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    ||||||||| | ||||||||||  ||||||||||||||||||||||||||| |||||||| ||||||||||| |  |  |||| ||| ||||| ||||||    
T  1827900 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggaagagcagtcaggacggactttagaaga 1827801  T
Q  327 accaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctaga 379  Q
    | ||| || ||  | |||||||| || ||||||||||| || || ||||||||    
T  1827800 atcaaacggccaccgaaagagaggaaccgactttgccaaccagacaatctaga 1827748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 227 - 379
Target Start/End: Complemental strand, 23647609 - 23647457
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    ||||||||| | ||||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||| |  |  |||| ||||||||| ||||||    
T  23647609 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 23647510  T
Q  327 accaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctaga 379  Q
    | |||  ||||  | ||||| || || ||||||||||| || || ||||||||    
T  23647509 atcaaatgaccaccgaaagataggaaccgactttgccaaccagacaatctaga 23647457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 32146621 - 32146553
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||    
T  32146621 gggtaaagatcctctccatttataactttttccatttgttgcaatttggagagagatagatacaaaaaa 32146553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 34976733 - 34976825
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaa 331  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||||| ||||| |||||||  ||||||| ||||||||| | |||||||||    
T  34976733 agattcaatggaagagattatacctgatggagctttgaagaaggaaagcgcataaacaggcagagaggtcaggacagactttaaaagaaccaa 34976825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 46239085 - 46239017
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||    
T  46239085 gggtaaagatcctctccatttataactttttccatttgttgcaatttgaagagagatagacacaaaaaa 46239017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 441 - 504
Target Start/End: Original strand, 17492939 - 17493002
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    |||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  17492939 gggtaaagatcctctccatttataactttttccatttgttgcaatttggagagagatagacaca 17493002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 441 - 504
Target Start/End: Complemental strand, 55160509 - 55160446
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  55160509 gggtcaagatcctctccatttataatcttttccatttgttgcaatttggagagagatagacaca 55160446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 439 - 509
Target Start/End: Complemental strand, 17493123 - 17493053
Alignment:
Q  439 aagggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||| ||||| ||||||||||| |||||  ||||||||||||||||||||||||||||||||||||    
T  17493123 aagggtcaacatcctttccatttataactttttctatttgttgcaatttggagagagatagacacaaaaaa 17493053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 449 - 509
Target Start/End: Complemental strand, 25219107 - 25219047
Alignment:
Q  449 atcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||    
T  25219107 atcctctccatttataactttttccatttgttgtaatttggagagagatagacacaaaaaa 25219047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 28405443 - 28405375
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||| ||||||    
T  28405443 gggtaaagatcctctccatttataaatttttccatttgttacaatttgaagagagatagacaaaaaaaa 28405375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 37002208 - 37002276
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||||||||||||||||| | ||||| |||||||||||| ||||||||||||||||||    
T  37002208 gggttaagatcctctccatttataaatttctccatttattgcaatttggaaagagatagacacaaaaaa 37002276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 53526207 - 53526139
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||||||||||||| || || |||||||||||||||||||||||||||||| ||||||    
T  53526207 gggtaaagatcctctccatttataacttcttccatttgttgcaatttggagagagatagacaaaaaaaa 53526139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 42953041 - 42952966
Alignment:
Q  51 ctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    ||||||||||||||  ||||||| |||||||||| |||||||||||| ||||||||||||  ||||||||||||||    
T  42953041 ctataccacaaacctactctatctaccaacatcctccaacaccatttacctaacaaagcaaaattaaactccctca 42952966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 56 - 379
Target Start/End: Original strand, 47419413 - 47419736
Alignment:
Q  56 ccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctca-ctcccaaccctccatactc 154  Q
    ||||||| |||| || |||| ||||| || |||||||||||| |||||||||||| | |||||||||||||||  ||| | | |||||||||||| ||||    
T  47419413 ccacaaagcatccctctccaacaacaacctccaacaccatttacctaacaaagcaatgttaaactccctcagcc-tctgaacccccaaccctccaaactc 47419511  T
Q  155 ctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagag 254  Q
    ||| |  | ||  | ||  | |||    ||||| || ||||| || || ||||||| ||||||||       ||||||||| | ||||||||||  ||||    
T  47419512 cttcctcatactcaaagtatcccatctaacccaagatatttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagag 47419611  T
Q  255 attatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagc 354  Q
    |||||||||| |||||||||||||||||| || ||||||||||| |  |  |||| ||| ||||| || |||| ||| |||||  | ||||| || || |    
T  47419612 attatacctgtcggagctttgaagaaggagagtgcatagacagggagagcagtcaggaccgactttagtagaatcaaacgaccaccgaaagataggaacc 47419711  T
Q  355 gactttgccaccctgataatctaga 379  Q
    |||||||||| || || ||||||||    
T  47419712 gactttgccaaccagacaatctaga 47419736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 56337039 - 56336925
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    |||||||||||||||||  ||||||||||||||| ||| |||||||| || ||||||||||||  |||||| ||||||| ||| ||||| ||||| || |    
T  56337039 accctataccacaaacctactctatccaccaacaaccgacaacaccactttcctaacaaagcaagattaaattccctcaactgcctcac-cccaaacccc 56336941  T
Q  148 catactcctttcgtaa 163  Q
    ||| ||||| ||||||    
T  56336940 cattctcctctcgtaa 56336925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 26694482 - 26694781
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | | ||| ||||||||| | | | |||||||||  ||||| ||| ||  |||||||||| ||||||| |||||||||||| ||    
T  26694482 cccccacctccaacctcccatctacttcgccataacggacgactaaaacctgataccgcaaccctactctatccactaacatcctccaacaccatttacc 26694581  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    ||  |||||| ||||||||||| |||     ||||| ||||| |||||||||| ||||    |||| | ||  | |||| | | ||| | |||||| ||     
T  26694582 tagtaaagcaatattaaactccttcaatctcctcacccccaaacctccatacttctttttagaacacaaagtatcccaacctatccaagtaatttttcta 26694681  T
Q  201 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
      |||||||||||| ||||        ||||| || | ||||||||||  ||||||||||||||  |||||||||||||| |||||||||||||||||||    
T  26694682 caatcctcactcccaccccagaaaaaattattcaataaagattcaatggaagagattatacctgttggagctttgaagaaagaaagggcatagacaggca 26694781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 17317325 - 17317257
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| ||||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  17317325 gggtaaagatgctctcaatttataactttttccatttgttgcaatttggagagagatagacaaaaaaaa 17317257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 444 - 504
Target Start/End: Original strand, 32146442 - 32146502
Alignment:
Q  444 tcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||    
T  32146442 tcaaaatcctctccatttataactttttccatttgttgcaatttgtagagagatagacaca 32146502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 42779054 - 42779122
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 319  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||| ||  |||||||| ||||||||    
T  42779054 agagattatacctgatggagctttgaagaaggaaagcgcatagacagacagagaggtcaaaacagactt 42779122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 251 - 330
Target Start/End: Complemental strand, 10562660 - 10562581
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 330  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||| ||  |||||||  |||||||| | ||||||||    
T  10562660 agagattatacctgatggagctttgaagaaggaaagcgcatagacagacagagaggtcagaacagactttaaaagaacca 10562581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 19308940 - 19308837
Alignment:
Q  234 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 333  Q
    |||||||||||||||  ||||||||||||||  |||||| |||| || |||||||| |||||||||| ||| | || ||||||||| ||||||| ||| |    
T  19308940 aaaatagattcaatggaagagattatacctgcgggagctctgaaaaaagaaagggcgtagacaggcagtgaagacaggacagacttaagaagaatcaagc 19308841  T
Q  334 gacc 337  Q
    ||||    
T  19308840 gacc 19308837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 19733336 - 19733277
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  19733336 agattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacagg 19733277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 48312886 - 48312945
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  48312886 agattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 48312945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 54482508 - 54482449
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  54482508 agattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 54482449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 42952879 - 42952817
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 301  Q
    ||||||||||  ||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  42952879 agattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacaggcaa 42952817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 379
Target Start/End: Original strand, 19756047 - 19756199
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    ||||||||| | ||||||||||  |||||||||||||||| ||| |||||| |||||||| ||||||||||| |  |  |||| ||| ||||| || |||    
T  19756047 tttattaaacaaagattcaatggaagagattatacctgacagagttttgaaaaaggaaagtgcatagacaggtagcgcagtcaggacggactttagtaga 19756146  T
Q  327 accaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctaga 379  Q
    | ||| |||||  | ||||| || || ||||||||||| || || ||||||||    
T  19756147 atcaaacgaccaccgaaagaaaggaaccgactttgccaaccagacaatctaga 19756199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 379
Target Start/End: Complemental strand, 19783759 - 19783607
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    ||||||||| | ||||||||||  |||||||||||||||| ||| |||||| |||||||| ||||||||||| |  |  |||| ||| ||||| || |||    
T  19783759 tttattaaacaaagattcaatggaagagattatacctgacagagttttgaaaaaggaaagtgcatagacaggtagcgcagtcaggacggactttagtaga 19783660  T
Q  327 accaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctaga 379  Q
    | ||| |||||  | ||||| || || ||||||||||| || || ||||||||    
T  19783659 atcaaacgaccaccgaaagaaaggaaccgactttgccaaccagacaatctaga 19783607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 442 - 494
Target Start/End: Original strand, 25218935 - 25218987
Alignment:
Q  442 ggtcaagatcctctccatttataaattttttcatttgttgcaatttggagaga 494  Q
    |||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  25218935 ggtcaagatcctctccatttataactttttctatttgttgcaatttggagaga 25218987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 337
Target Start/End: Original strand, 15342639 - 15342710
Alignment:
Q  266 cggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacc 337  Q
    |||||||||||| |||||||||||||||||||||||||  | || |||||| || ||||||||||| |||||    
T  15342639 cggagctttgaaaaaggaaagggcatagacaggcaatgctgacacgacagatttaagaagaaccaaacgacc 15342710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 286
Target Start/End: Original strand, 15741000 - 15741059
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaag 286  Q
    ||||||||| | ||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  15741000 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaag 15741059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 441 - 504
Target Start/End: Original strand, 17317145 - 17317207
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    |||||||||||||| |||||||||| ||||| ||||| ||| ||||||||||||||||||||||    
T  17317145 gggtcaagatcctc-ccatttataactttttccatttattgtaatttggagagagatagacaca 17317207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 133
Target Start/End: Original strand, 23657892 - 23657983
Alignment:
Q  42 actaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtct 133  Q
    |||||||| |||||||| |||||| | |||||||| |||||||  ||||||||||||||||  || ||| ||||||||||| ||| ||||||    
T  23657892 actaaaactctataccaaaaaccacccctatccactaacatccttcaacaccatttccctagtaaggcaatattaaactccttcaactgtct 23657983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 20396386 - 20396432
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacag 297  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  20396386 agagattatacctgatggagctttgaagaaggaaagcgcatagacag 20396432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 455 - 509
Target Start/End: Original strand, 28701805 - 28701859
Alignment:
Q  455 tccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||||| ||||||    
T  28701805 tccatttataaatttatccatttgttggaatttggagagagatagacaaaaaaaa 28701859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 234 - 319
Target Start/End: Original strand, 19837922 - 19838007
Alignment:
Q  234 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 319  Q
    |||||||||||||||  ||||||||||||||  |||||| |||| || |||||||| |||||||||| ||| | || |||||||||    
T  19837922 aaaatagattcaatggtagagattatacctgcgggagctctgaaaaaagaaagggcgtagacaggcagtgaagacaggacagactt 19838007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 328
Target Start/End: Original strand, 29133683 - 29133744
Alignment:
Q  267 ggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 328  Q
    |||||||||||||||||||| ||||||||||  |  ||||||||||||||||| ||||||||    
T  29133683 ggagctttgaagaaggaaagagcatagacagagagagaggtcaagacagacttaagaagaac 29133744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 377
Target Start/End: Complemental strand, 55464200 - 55464091
Alignment:
Q  268 gagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgactttgccaccc 367  Q
    ||||||||||||||||||| ||||||||| |||  || ||||| |||||||| ||||| | ||| |||||  ||||||| | ||||||||| | ||||||    
T  55464200 gagctttgaagaaggaaagagcatagacatgcagagaagtcaatacagacttaagaaggatcaaacgaccaccaaaagaaaaaaagcgactctcccaccc 55464101  T
Q  368 tgataatcta 377  Q
     || ||||||    
T  55464100 agacaatcta 55464091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 327
Target Start/End: Complemental strand, 29328141 - 29328041
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    ||||||||||||||||||| |   ||| ||||||| ||  ||||| ||||||||||||||  |||||||||| |  |||||||||||| |||| ||||||    
T  29328141 tttattaaaaatagattcagtagaagaaattatacttgttggagccttgaagaaggaaagaccatagacaggtagagaggtcaagacaaactttagaaga 29328042  T
Q  327 a 327  Q
    |    
T  29328041 a 29328041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 461 - 509
Target Start/End: Original strand, 55160347 - 55160395
Alignment:
Q  461 tataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||||||||    
T  55160347 tataactttttccatttgttgcaatttggaaagagatagacacaaaaaa 55160395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 258 - 337
Target Start/End: Complemental strand, 3129305 - 3129226
Alignment:
Q  258 atacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacc 337  Q
    |||||||| |||| ||||||||| |||||||||||||||||||  || ||||||||||| || | ||| ||||| |||||    
T  3129305 atacctgatggagttttgaagaaagaaagggcatagacaggcagagaagtcaagacagattttaaaagtaccaaacgacc 3129226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 10562919 - 10562765
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| | ||||| ||||||||| | ||| ||||| || | |||||| || |||   ||||| || | ||||| ||||||||| || ||    
T  10562919 ccccaacctccaacctcccacctacttcgccataacgggcgactaagactcgataccaaaagccactcctatctactagcatcctccaacaccactttcc 10562820  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcc 155  Q
    |||||||||   |||||| ||  ||| ||||||||| ||||| |||||| |||||    
T  10562819 taacaaagccaaattaaattctttcaactgtctcacccccaaacctccaaactcc 10562765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 364
Target Start/End: Complemental strand, 19162522 - 19162392
Alignment:
Q  234 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 333  Q
    |||||||| || |||  ||||||| ||||||  ||||| |||||||||||||| ||||||||||| |  | |||||||||| |||| | ||||| ||| |    
T  19162522 aaaatagaatctatggaagagattgtacctgctggagccttgaagaaggaaagagcatagacaggtagcgcggtcaagacatactttaaaagaatcaagc 19162423  T
Q  334 gaccctcaaaagagagaaagcgactttgcca 364  Q
    ||||  |||| || ||||| | |||||||||    
T  19162422 gacctccaaaggaaagaaacctactttgcca 19162392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 170
Target Start/End: Complemental strand, 55464412 - 55464290
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    |||||||||||||||||| ||||||| || |||| || ||||||| |||| ||||| ||  || | ||||||||||||| ||  || || | || |||||    
T  55464412 accctataccacaaaccacctctatctactaacaacctccaacactatttacctaaaaatccagtgttaaactccctcatcttcctaaccctcatccctc 55464313  T
Q  148 catactcctttcgtaaacaaaca 170  Q
    || ||| ||||| ||||||||||    
T  55464312 caaacttctttcctaaacaaaca 55464290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 53810395 - 53810516
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | ||||| ||||||||| | | | ||||||||    ||||||||||| |||||||| || ||||||| |||||||||||| |     
T  53810395 cccccacctccaacctcccacctacttcgccataacagacgactaaaacatggtaccacaaaccttctctatcgactaacatcctccaacaccatttaca 53810494  T
Q  101 taacaaagcactattaaactcc 122  Q
    ||  ||| || |||||||||||    
T  53810495 tagtaaaacaatattaaactcc 53810516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 440 - 480
Target Start/End: Original strand, 5361369 - 5361409
Alignment:
Q  440 agggtcaagatcctctccatttataaattttttcatttgtt 480  Q
    |||||||| ||||||||||||||||||||| ||||||||||    
T  5361369 agggtcaatatcctctccatttataaatttcttcatttgtt 5361409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 5524374 - 5524441
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||| ||||||||||||||||||||||| |||||||| | |||| |||||| | ||||||| ||||    
T  5524374 gggtcaatatcctctccatttataaatttttccatttgtt-ccatttagagagataaagacacataaaa 5524441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 48312677 - 48312773
Alignment:
Q  30 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||| || || || ||||||  |||||| || |||||||| || |||| |||| ||||||||||||||| ||||||| | |||||||| ||||    
T  48312677 ccatacctagccaccaacaccctacgccacaacccctctctatcaactaacaaccgctaacaccatttccctagcaaagcaatgttaaactctctca 48312773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 54482680 - 54482620
Alignment:
Q  66 tctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||| || |||| |||||||||||||||||||| ||||||| | |||||||| ||||    
T  54482680 tctctatcaactaacaaccgccaacaccatttccctagcaaagcaatgttaaactcgctca 54482620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 17826117 - 17826062
Alignment:
Q  232 taaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagg 287  Q
    |||||||||| ||||||| ||| || |||||||| |||||||||||||| ||||||    
T  17826117 taaaaatagagtcaatgatagaaatgatacctgagggagctttgaagaaagaaagg 17826062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 300
Target Start/End: Complemental strand, 20509300 - 20509258
Alignment:
Q  258 atacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    |||||||||||||| |||||||| ||||||||||| |||||||    
T  20509300 atacctgacggagccttgaagaaagaaagggcataaacaggca 20509258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 45636364 - 45636290
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 301  Q
    |||||||||||||||||||||    || || |||||||||||||||||||| || |||||  |||| ||||||||    
T  45636364 tttattaaaaatagattcaatagaggaaatgatacctgacggagctttgaaaaaagaaagaacataaacaggcaa 45636290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 7099080 - 7099193
Alignment:
Q  45 aaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaacc 144  Q
    ||||||| |||||||||||| |||| ||| || ||||  | ||||||| | || || ||||| ||   |||||||||||||| ||| || || ||||| |    
T  7099080 aaaacccgataccacaaaccctctcgatcaactaacaaactccaacacaactttcccaacaacgcctcattaaactccctcaactgcctaacacccaaac 7099179  T
Q  145 ctccatactccttt 158  Q
    ||||||||||||||    
T  7099180 ctccatactccttt 7099193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 509
Target Start/End: Complemental strand, 37002400 - 37002332
Alignment:
Q  440 agggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||| ||||||||||||||||||||| | |||||||| | |||| |||||| | ||||||| ||||    
T  37002400 agggtcaatatcctctccatttataaatttctccatttgtt-ccatttagagagataaagacacataaaa 37002332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 40688705 - 40688778
Alignment:
Q  86 ccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttc 159  Q
    ||||||||| ||||||||||| ||   |||||||||||||| ||| || ||||| || || |||||||||||||    
T  40688705 ccaacaccacttccctaacaacgcctcattaaactccctcaactgcctaactcctaaaccaccatactcctttc 40688778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 126
Target Start/End: Complemental strand, 51072203 - 51072154
Alignment:
Q  77 caacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||| | |||||||||||||||||||| ||||  ||||||||||||||    
T  51072203 caacatacaccaacaccatttccctaacagagcaacattaaactccctca 51072154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 480 - 509
Target Start/End: Original strand, 56453816 - 56453845
Alignment:
Q  480 tgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||||||||||||||    
T  56453816 tgcaatttggagagagatagacacaaaaaa 56453845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 170
Target Start/End: Complemental strand, 13158252 - 13158220
Alignment:
Q  138 cccaaccctccatactcctttcgtaaacaaaca 170  Q
    ||||||||||||||||||||| |||||||||||    
T  13158252 cccaaccctccatactccttttgtaaacaaaca 13158220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 338
Target Start/End: Original strand, 14538269 - 14538373
Alignment:
Q  234 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 333  Q
    |||||||||||||||  | ||||||||||||  |||||| |||| || |||||||| ||||||| || ||| | || ||| || || ||||||| ||| |    
T  14538269 aaaatagattcaatggaatagattatacctgcgggagctctgaaaaaagaaagggcgtagacagacagtgaagacatgacggatttaagaagaatcaagc 14538368  T
Q  334 gaccc 338  Q
    |||||    
T  14538369 gaccc 14538373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 319
Target Start/End: Complemental strand, 53486265 - 53486197
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 319  Q
    ||||||||||| ||| |||||||||||||||||||   |||||||||| |  |||||||  ||||||||    
T  53486265 agagattatacttgatggagctttgaagaaggaaaacacatagacaggaagagaggtcagaacagactt 53486197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 56269225 - 56269158
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||| ||||||||||||||||||||| | |||||||| | |||| |||||| | ||||||| ||||    
T  56269225 gggtcaatatcctctccatttataaatttctccatttgtt-ccatttagagagataaagacacataaaa 56269158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 2e-75; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 48 - 440
Target Start/End: Original strand, 25193689 - 25194081
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    |||| |||||| || |||||||||||||||||||||| ||| |||||||| ||||| ||||||| |||||| ||||| | ||| ||||| ||||| ||||    
T  25193689 acccgataccagaacccatctctatccaccaacatcctccagcaccattttcctaataaagcacaattaaattcccttaactgcctcacacccaatcctc 25193788  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    || |||||||| |||||||||| ||  ||||||  | ||||||||||||||||||||||||| |||||||||        |||| |||||||||||||||    
T  25193789 caaactccttttgtaaacaaactgatctccaagaaatccaggaaattttcctgttatcctcattccctccccaaattttgttataaaaaatagattcaat 25193888  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagag 347  Q
    || |||||||||||||||| ||||||||||||||||||| ||||||||||  |  |||||||||||| |||| | ||| | |||||||||  |  ||||     
T  25193889 gatagagattatacctgacagagctttgaagaaggaaagagcatagacagtaagcgaggtcaagacaaactttaaaaggatcaaccgaccaccgtaagat 25193988  T
Q  348 agaaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggctaacctcttcggatcaccaccaatagaa 440  Q
    ||||||||||| |||||||| || ||||| ||||| || || | ||||||| | ||||| || |||||||  ||||||| |||||||||||||    
T  25193989 agaaagcgactctgccaccccgacaatctggacttaattgtatgcaacacaggatcccagaatgctaaccgattcggattaccaccaatagaa 25194081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 330
Target Start/End: Original strand, 7452906 - 7453235
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| |||||||||||||||||||| |||||| | |||||||||||||||| |||| ||||||||||||||||||||||| || ||    
T  7452906 ccccaacctccaacctgccacctaattcgccatacctggaaactaagatcctataccacaaaccacctctgtccaccaacatccgccaacaccacttacc 7453005  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    |||||||||||||||||| ||  ||| ||||||||| ||||| |||||||||||||||  | |||||||||  |||||| | | |||||||||||| ||     
T  7453006 taacaaagcactattaaattcattcaactgtctcacccccaaacctccatactccttttttgaacaaacagttttccaacctatccaggaaatttttcta 7453105  T
Q  201 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    | ||||||||| || ||||        |||||||| | |||||||| |  ||||||||||||||| |||||||||||||| ||||| ||||||||||| |    
T  7453106 tgatcctcactgcccccccaaaaaaaattattaaataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagtgcatagacaggta 7453205  T
Q  301 atgaggtcaagacagacttgagaagaacca 330  Q
      || ||||||||||| || | ||||||||    
T  7453206 gagaagtcaagacagattttaaaagaacca 7453235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 47 - 367
Target Start/End: Original strand, 6245682 - 6246004
Alignment:
Q  47 aaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccct 146  Q
    |||||||||||| |  ||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||  || ||  ||||| |||||||||    
T  6245682 aaccctataccagagcccacctctatccaccaacatccgccaacacaatttacctaacaaagcgctattaaactcctgcaacttcctcacccccaaccct 6245781  T
Q  147 ccatac--tcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattc 244  Q
    ||||||  ||||| | |||||||||| || ||||||  | ||||||||||||||| ||||| |||||||||||||       ||||||||| ||| ||||    
T  6245782 ccatacgctccttacataaacaaacaaagctccaagaaatccaggaaattttcctattatcatcactccctccccaaatttttttattaaatataaattc 6245881  T
Q  245 aatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaa 344  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| | || | ||||| ||||||||| ||||  |||| | ||||  || ||    
T  6245882 aatgacagggattatacctgacggagctttgaagaaggaaagagcatagacaagtaacgcggtcaggacagacttaagaatgaccaccagaccaccataa 6245981  T
Q  345 gagagaaagcgactttgccaccc 367  Q
    ||||| || |||||| |||||||    
T  6245982 gagagcaaacgacttcgccaccc 6246004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 45 - 379
Target Start/End: Complemental strand, 29721452 - 29721119
Alignment:
Q  45 aaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaacc 144  Q
    ||||||||||||||||| ||| ||  ||| || ||||||| |||||||||||| |||||||| |||  |||||||||| |||  |  ||||| |||||||    
T  29721452 aaaaccctataccacaacccaccttgatcaactaacatcctccaacaccatttgcctaacaacgcaagattaaactccttcaatttcctcacacccaacc 29721353  T
Q  145 ctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattc 244  Q
    | ||||||||||| ||  |||||| | | |||||||||| |||||||||||||||||||||||||||||||||||           ||||| ||||||||    
T  29721352 c-ccatactccttacgagaacaaatataattccaagcgatccaggaaattttcctgttatcctcactccctccccaaaaaaacaatttaaacatagattc 29721254  T
Q  245 aatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaa 344  Q
    ||||  ||||||||||||||||||||||||||| |||||||| |||||||||||||| |||| || |||||||||||| | || ||| || ||| | ||     
T  29721253 aatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacaggcaaagaggacaggacagacttgagcaaaatcaatcggcccccgaat 29721154  T
Q  345 gagagaaagcgactttgccaccctgataatctaga 379  Q
    ||||| || ||||| ||||||||| | ||||||||    
T  29721153 gagaggaaacgactctgccaccctaacaatctaga 29721119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 45 - 286
Target Start/End: Original strand, 36025119 - 36025360
Alignment:
Q  45 aaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaacc 144  Q
    ||||| |||||||| || ||  ||||||||||||||||||||||||||||||  ||||| |||||| ||||||| || |||| ||| ||||| ||||| |    
T  36025119 aaaactctataccataaccctcctctatccaccaacatccgccaacaccattatcctaataaagcaatattaaattcactcaactgcctcacccccaatc 36025218  T
Q  145 ctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattc 244  Q
    | || |  || || ||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||       ||||||||||||||| |     
T  36025219 ccccctcttctttacgtaaacaaacagtgctccaagcgatccaggaaattttcctgttatcctcactccctccccaaatttttttattaaaaatagagtt 36025318  T
Q  245 aatgacagagattatacctgacggagctttgaagaaggaaag 286  Q
    ||||  ||||||||||||||||||||||||||||||||||||    
T  36025319 aatggaagagattatacctgacggagctttgaagaaggaaag 36025360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 48 - 331
Target Start/End: Original strand, 12341168 - 12341451
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    |||||| ||||||| ||  |||||||||| ||||||| ||||||||| || |||||||||||  ||||||| ||| ||| ||||||||| ||||| || |    
T  12341168 accctaaaccacaaccctcctctatccactaacatcctccaacaccactttcctaacaaagccatattaaattccttcaactgtctcacccccaaacccc 12341267  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    ||| ||||||||||||||| || ||  ||||||| | |||||||||||||||||||||||||||||||||||        ||   ||||||| |||||||    
T  12341268 cattctcctttcgtaaacataccgaactccaagcaatccaggaaattttcctgttatcctcactccctccccaaaatatatttaaaaaaataaattcaat 12341367  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaa 331  Q
    |  |||||||||||| ||| |||||||||| |||||||| || ||||||||||  |||| || ||| |||||||||||||||||    
T  12341368 ggaagagattatacccgacagagctttgaaaaaggaaagagcgtagacaggcagagaggacatgacggacttgagaagaaccaa 12341451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 145 - 328
Target Start/End: Original strand, 15539755 - 15539938
Alignment:
Q  145 ctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattc 244  Q
    ||||||||||||| | |||||| | |||| ||||||| ||||||||||||||| |||| ||||||||||||||||       ||||||||||||||||||    
T  15539755 ctccatactccttacataaacagatagagctccaagcaacccaggaaattttcatgttctcctcactccctccccaaaattttttattaaaaatagattc 15539854  T
Q  245 aatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 328  Q
    ||||| ||| || ||||||||||||||||||||||||||||| ||||| |||||||  ||||||||||||||||| ||||||||    
T  15539855 aatgatagaaatgatacctgacggagctttgaagaaggaaagagcataaacaggcagagaggtcaagacagactttagaagaac 15539938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 27 - 384
Target Start/End: Complemental strand, 4987625 - 4987268
Alignment:
Q  27 tcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||| | ||| |||||||| |||||||| |||||| | | |||||| ||||||| |||||||||||||||||  || |||  |||||||||| |||    
T  4987625 tcgccataacgggcgactaaaactctataccaaaaaccacccccatccactaacatcctccaacaccatttccctagtaaggcaacattaaactccttca 4987526  T
Q  127 gctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnn 226  Q
     |||||| || || ||||||||| |||||||  | | |||||||||||||||| | | ||| || |||||||| | ||||||||| || ||||           
T  4987525 actgtctaacccctaaccctccaaactccttctggagacaaacagagttccaacctatccaagacattttcctatgatcctcactaccaccccaaaaaaa 4987426  T
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
     |||||||| | |||||||| |  ||| |||||||||||||||||||||||||| ||||| ||||||||||| |  |||||||| ||||| |||||||||    
T  4987425 attattaaataaagattcaagggtagaaattatacctgacggagctttgaagaaagaaagagcatagacaggtagagaggtcaacacagatttgagaaga 4987326  T
Q  327 accaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctagacttta 384  Q
    ||||| || ||  ||||||| || || ||||| | ||| ||||| | |||||| ||||    
T  4987325 accaaacggccaccaaaagaaaggaaacgactattccaacctgacagtctagatttta 4987268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 48 - 277
Target Start/End: Complemental strand, 37165660 - 37165431
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    |||||||||||||| ||  |||||||||| ||||||| |||||| || || ||||| | |||| ||||||| ||| ||| | | ||||| ||||| || |    
T  37165660 accctataccacaagcctcctctatccactaacatcctccaacatcactttcctaatagagcaatattaaattccttcaaccgcctcacccccaaacccc 37165561  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    ||| |||||||||||| ||||| ||| ||||||| | |||||| |||||||||||||||||||||||||||         | ||||||||||||||||||    
T  37165560 cattctcctttcgtaagcaaaccgagctccaagctatccaggagattttcctgttatcctcactccctcccaaaaaaaaataattaaaaatagattcaat 37165461  T
Q  248 gacagagattatacctgacggagctttgaa 277  Q
    |  |||||||||||||||||||||||||||    
T  37165460 ggaagagattatacctgacggagctttgaa 37165431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 314
Target Start/End: Original strand, 36157708 - 36158021
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| | ||||| ||||||||||  ||| |||||||| | |||||||||||||   ||||| || | ||||| ||||||||| || ||    
T  36157708 ccccaacctccaacctcccacctacttcgccatacg-ggcgactaaaactcaataccacaaaccactcctatcaacaagcatcctccaacaccactttcc 36157806  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    |||||||||   |||||||||| ||| ||||||||| ||||| |||||| |||||||  | |  || |||   | |||  | | ||| || ||||||||     
T  36157807 taacaaagcctgattaaactccttcaactgtctcacccccaaacctccaaactccttatggaggcacacattatgccaccctatccaagatattttccta 36157906  T
Q  201 ttatcctcactccctccccnnnnnnnt-ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggc 299  Q
    |||||||||||||| ||||         |||||||| | ||||||||||  ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  36157907 ttatcctcactcccaccccaaaaaaaaattattaaacaaagattcaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacaggc 36158006  T
Q  300 aatgaggtcaagaca 314  Q
    |  ||||||||||||    
T  36158007 agagaggtcaagaca 36158021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 26749505 - 26749573
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26749505 gggtcaatatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 26749573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 49 - 297
Target Start/End: Original strand, 18187748 - 18187995
Alignment:
Q  49 ccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctcc 148  Q
    ||||||||||||||||| ||||||| || ||||  | |||||||||||| |||||||||||| | ||||||||||||   || || || |||||||||||    
T  18187748 ccctataccacaaaccacctctatctactaacaatctccaacaccatttacctaacaaagcagtgttaaactccctcgtatgcctaacccccaaccctcc 18187847  T
Q  149 atactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatg 248  Q
    | |||| |||| ||||||||||   ||||||   | ||| ||||||||||| || ||||||| ||||||||       |||||| || | | ||| |||     
T  18187848 agactcttttcctaaacaaaca-ttttccaactaatccaagaaattttcctattgtcctcacaccctccccaaaaaaatttattcaataaaaatttaata 18187946  T
Q  249 acagagattatacctgacggagctttgaagaaggaaagggcatagacag 297  Q
      ||||||| ||||||||||||||||||||| |||||| ||||||||||    
T  18187947 gaagagattgtacctgacggagctttgaagatggaaagagcatagacag 18187995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 1937111 - 1937179
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  1937111 gggtcaagatcctctccatttataaatttttcaatttgttgcaatttggagagagatagacacaaaaaa 1937179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 377
Target Start/End: Original strand, 9923343 - 9923531
Alignment:
Q  189 gaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaaggg 288  Q
    |||||||| || |||||||||| |||||||        ||||||||| | ||||||||||  ||||||||||||||||||||||||||| |||||||| |    
T  9923343 gaaatttttcttttatcctcaccccctcccgaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtg 9923442  T
Q  289 catagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgactttgccaccctgataatcta 377  Q
     ||||||||| |  |  |||||||| ||||| ||||||||||| |||||  ||||||| || || ||||||||||| || || ||||||    
T  9923443 tatagacaggtagagcagtcaagacggacttaagaagaaccaaacgaccaccaaaagaaaggaatcgactttgccaaccagacaatcta 9923531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 56 - 325
Target Start/End: Original strand, 17700089 - 17700358
Alignment:
Q  56 ccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcc 155  Q
    |||||||||  | ||||| || |||| |||||||||||||||||| ||||||||| | |||||||| |||| |   ||||| ||||||||||||||||||    
T  17700089 ccacaaacctcccctatcaactaacagccgccaacaccatttccccaacaaagcaatgttaaactctctcaacctcctcacacccaaccctccatactcc 17700188  T
Q  156 tttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagaga 255  Q
     | |  ||||| | |||  | ||| | ||||| ||||| || || ||||||||||  || ||||       |||||| || | |||||||||   |||||    
T  17700189 ctcctcaaacacaaagaacttcaaccaacccaagaaatctttcttttatcctcacaacccccccaaaaaaatttatttaacaaagattcaatagaagaga 17700288  T
Q  256 ttatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaag 325  Q
    ||||| |||||||||||||||| |||||||| ||||||||||| |  |  ||||||||||| ||||||||    
T  17700289 ttatatctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagatttgagaag 17700358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 24241782 - 24241714
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||    
T  24241782 gggtcaagatcctctccatttataaatttttccatttgttgcaagttagagagagatagacacaaaaaa 24241714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 446 - 509
Target Start/End: Original strand, 17867621 - 17867684
Alignment:
Q  446 aagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  17867621 aagatcctctccatttataactttttccatttgttgcaatttggagagagatagacacaaaaaa 17867684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 358
Target Start/End: Complemental strand, 16375438 - 16375332
Alignment:
Q  252 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaa 351  Q
    |||||||||||||  |||| ||||||||||||||| | |||||||||||  |||||||||||||| ||||| |||||||| |||||  ||||||||||||    
T  16375438 gagattatacctgttggaggtttgaagaaggaaagtgtatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaa 16375339  T
Q  352 agcgact 358  Q
    | |||||    
T  16375338 accgact 16375332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 227 - 337
Target Start/End: Original strand, 7925166 - 7925276
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    ||||||||| | ||||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||| |  |  |||| ||||||||| ||||||    
T  7925166 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 7925265  T
Q  327 accaaccgacc 337  Q
    | ||| |||||    
T  7925266 atcaaacgacc 7925276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 15439718 - 15439796
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    ||||||||||| ||||||||||||| |||||||||| ||||||||||||| ||||  || |||||||||||||||||||    
T  15439718 accctataccataaaccatctctattcaccaacatctgccaacaccatttacctagtaaggcactattaaactccctca 15439796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 15531022 - 15531100
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    ||||||||||| ||||||||||||| |||||||||| ||||||||||||| ||||  || |||||||||||||||||||    
T  15531022 accctataccataaaccatctctattcaccaacatctgccaacaccatttacctagtaaggcactattaaactccctca 15531100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 48 - 170
Target Start/End: Complemental strand, 16048455 - 16048333
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    |||||| | ||||||||  ||||||||| |||||||| |||||||||||| ||||| | |||  | ||||||||||||| ||| ||    ||||||||||    
T  16048455 accctaaagcacaaaccccctctatccatcaacatcctccaacaccatttacctaaaagagccatgttaaactccctcatctgcctagtccccaaccctc 16048356  T
Q  148 catactcctttcgtaaacaaaca 170  Q
    |||||||||||||||||||||||    
T  16048355 catactcctttcgtaaacaaaca 16048333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 56 - 298
Target Start/End: Original strand, 20824908 - 20825151
Alignment:
Q  56 ccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcc 155  Q
    |||||||||  | ||||| || |||| || ||||||||||||||| ||||||||| | |||||||| |||| |   || || ||||||||||||||||||    
T  20824908 ccacaaacctcccctatcaactaacagcctccaacaccatttccccaacaaagcaatgttaaactctctcaacctcctaacacccaaccctccatactcc 20825007  T
Q  156 tttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagaga 255  Q
     | |  || || |||||  ||||| | ||||| ||||| || || ||||||||||  || ||||       ||||||||| | |||||||||   |||||    
T  20825008 ctcctcaagcacacagaactccaaccaacccacgaaatctttcttttatcctcacatcccccccaaaaaaatttattaaacaaagattcaatagaagaga 20825107  T
Q  256 ttatacctgacggagctttg-aagaaggaaagggcatagacagg 298  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  20825108 ttatacctgacggagctttgaaaaaaggaaagtgcatagacagg 20825151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 324
Target Start/End: Complemental strand, 4992056 - 4991959
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaa 324  Q
    ||||||||||||||||||| ||  |||||||||| ||||| |||||||||||||||||||  |||||||| |||| || || |||||| |||||||||    
T  4992056 tttattaaaaatagattcagtggaagagattatatctgacagagctttgaagaaggaaagatcatagacatgcaaagaagtaaagacatacttgagaa 4991959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 334
Target Start/End: Original strand, 36493167 - 36493268
Alignment:
Q  233 aaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaac 332  Q
    ||||||||| |||| |  ||| ||||||||||||||||| |||||||||||||| ||||||||||| |  ||||||||||||||||| || ||||| |||    
T  36493167 aaaaatagaatcaagggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttaggagaactaac 36493266  T
Q  333 cg 334  Q
    ||    
T  36493267 cg 36493268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 227 - 331
Target Start/End: Original strand, 12332628 - 12332732
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    |||| |||||||||| |||| |  ||| ||||||||||| ||||| ||||||||||| || ||||||||||| |  ||||||||||||||||| ||||||    
T  12332628 tttagtaaaaatagagtcaagggaagaaattatacctgatggagccttgaagaaggagagagcatagacaggtagagaggtcaagacagactttagaaga 12332727  T
Q  327 accaa 331  Q
    |||||    
T  12332728 accaa 12332732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 30905080 - 30905012
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| | ||||||    
T  30905080 gggtaaagatcctctccatttataattttttccatttgttgcaatttggagagagatagataaaaaaaa 30905012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 441 - 504
Target Start/End: Complemental strand, 17867798 - 17867735
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    |||| |||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  17867798 gggttaagatcctctccatttataactttttccatttgttgaaatttggagagagatagacaca 17867735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 23942641 - 23942941
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | ||||| |||| || | | ||| ||||||||   ||||||||| || |||||||| || |||| || |||||||||||| ||    
T  23942641 cccccacctccaacctcccacctacttcgtcacaacgggcgactaaaacatgataccacaacccttctctatcaactaacaacctccaacaccatttacc 23942740  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    ||  ||||||  |||||||||| ||| ||  || || ||||| ||||||| |||||||    |||| |  |  |||||| | | ||| |||||||| ||     
T  23942741 tagtaaagcaacattaaactccttcaacttcctgacccccaaacctccatgctcctttttagaacacaaggtattccaacctatccaagaaatttttcta 23942840  T
Q  201 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
      |||||||||||| ||||        ||||| || | ||||||||||  ||||||||||| ||| |||||||||||||||||||| |||||||||||||    
T  23942841 aaatcctcactcccaccccaaaaaaaattattcaataaagattcaatggaagagattatacatgatggagctttgaagaaggaaagagcatagacaggca 23942940  T
Q  301 a 301  Q
    |    
T  23942941 a 23942941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 24794350 - 24794425
Alignment:
Q  51 ctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    ||||||||||||||  ||||||| |||||||||| |||||||||||| ||||||||||||  ||||||||||||||    
T  24794350 ctataccacaaacctactctatctaccaacatcctccaacaccatttacctaacaaagcaaaattaaactccctca 24794425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 189 - 379
Target Start/End: Complemental strand, 26774645 - 26774455
Alignment:
Q  189 gaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaaggg 288  Q
    ||||||||||| |  |||||||| |||||||       |||||| |||| | |||||||   ||||||||||| ||||||||||||||||||||| || |    
T  26774645 gaaattttcctatgttcctcacttcctccccaaaaaaatttatttaaaagatattcaatagaagagattatacatgacggagctttgaagaaggagagag 26774546  T
Q  289 catagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctaga 379  Q
    |||||| ||| || || |||| ||||||||| |  |||| ||| |||||  ||||||| ||||| ||||| | ||| || |||||||||||    
T  26774545 catagataggtaacgaagtcaggacagacttaatgagaatcaaacgaccaacaaaagacagaaaacgactcttccaaccagataatctaga 26774455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 17659645 - 17659713
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 319  Q
    ||||||||||| ||| |||||||| ||||||||||| |||||||||||||| ||||||| |||||||||    
T  17659645 agagattatacttgatggagcttttaagaaggaaagcgcatagacaggcaaagaggtcaggacagactt 17659713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 449 - 509
Target Start/End: Complemental strand, 34612674 - 34612614
Alignment:
Q  449 atcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||||||| ||||| ||| ||||| |||||||||||||||||||||    
T  34612674 atcctctccatttataaatttttccatttattgtaatttagagagagatagacacaaaaaa 34612614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 227 - 298
Target Start/End: Original strand, 8300583 - 8300654
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||| | ||||||||||  |||||||||||||| |||||||||||| |||||||| |||||||||||    
T  8300583 tttattaaacaaagattcaatggaagagattatacctgccggagctttgaaaaaggaaagtgcatagacagg 8300654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 13878835 - 13878776
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  13878835 agattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 13878776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 24794512 - 24794574
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 301  Q
    ||||||||||  ||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  24794512 agattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacaggcaa 24794574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 6901729 - 6901786
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagaca 296  Q
    ||||||||||  ||||||||||||| | ||||||||||||||||||||||||||||||    
T  6901729 agattcaatggaagagattatacctaatggagctttgaagaaggaaagggcatagaca 6901786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 44082598 - 44082497
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | ||||| ||||||||| | ||| |||||||||  ||||||||| || |||||||| || ||||||| |||||||||||| ||    
T  44082598 cccccacctccaacctcccacctacttcgccataacgggcgactaaaacctgataccacaacccttctctatcaactaacatcctccaacaccatttacc 44082499  T
Q  101 ta 102  Q
    ||    
T  44082498 ta 44082497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 453 - 509
Target Start/End: Complemental strand, 11090612 - 11090556
Alignment:
Q  453 tctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||||||||||||||  |||||||||||||||||||| |||||||| ||||||    
T  11090612 tctccatttataaatttttcaatttgttgcaatttggagagtgatagacaaaaaaaa 11090556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 164 - 337
Target Start/End: Complemental strand, 41691183 - 41691010
Alignment:
Q  164 acaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacct 263  Q
    |||||||||||||||| | ||||| | |||||| || | |||||||| ||| ||||       |||| | |||||||||||||||  |||||||||||||    
T  41691183 acaaacagagttccaatctacccaagcaatttttctatgatcctcacccccaccccaaaatattttaattaaaatagattcaatggaagagattatacct 41691084  T
Q  264 gacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacc 337  Q
    |  |||||| |||| || |||||||  |||||||||| ||| | || ||||||||| || |||| ||| |||||    
T  41691083 gcgggagctctgaaaaaagaaagggtgtagacaggcagtgaagacaggacagacttaaggagaatcaatcgacc 41691010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 296
Target Start/End: Original strand, 5585290 - 5585538
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||| ||| || | ||||||| || |||| |  |||||||||||| ||||  |||||| ||||||| ||||| | ||  |||||  |||| ||||    
T  5585290 accctatacaacagactacctctatcgactaacaactaccaacaccatttacctagtaaagcaatattaaattcccttaacttcctcacctccaatcctc 5585389  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    |||||||||| || |||||||||   ||||||   | ||| || |||||||| | |||||||||||| |||         ||||| || |||||||||||    
T  5585390 catactccttacgcaaacaaacaatattccaacgtaaccaagatattttcctatgatcctcactcccccccaaaaaaaaattattcaatatagattcaat 5585489  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagaca 296  Q
    |  ||||||||||| ||| ||||| ||||||||| | || |||||||||    
T  5585490 ggaagagattatacatgatggagccttgaagaagaacagagcatagaca 5585538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 11393884 - 11393809
Alignment:
Q  51 ctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    ||||||||||||||  ||||||| ||||||| || |||||||||||| |||||||| |||  ||||||||||||||    
T  11393884 ctataccacaaacctactctatcgaccaacaacctccaacaccatttacctaacaatgcaaaattaaactccctca 11393809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 445 - 504
Target Start/End: Original strand, 30904902 - 30904961
Alignment:
Q  445 caagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    ||||||||||||||||||||| ||||| ||||| || |||||| ||||||||||||||||    
T  30904902 caagatcctctccatttataactttttccatttattacaatttagagagagatagacaca 30904961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 379
Target Start/End: Original strand, 32267335 - 32267486
Alignment:
Q  228 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 327  Q
    |||||||| | ||||||||||  ||||||||||||||||  ||||||||| |||||||| ||||||||||| |  |  |||| ||| |||||  ||||||    
T  32267335 ttattaaacaaagattcaatggaagagattatacctgacaaagctttgaaaaaggaaagtgcatagacaggtagagcagtcatgacggacttttgaagaa 32267434  T
Q  328 ccaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctaga 379  Q
     ||| |||||  | ||||| || || ||||||||||| || || ||||||||    
T  32267435 tcaaacgaccaccgaaagaaaggaaccgactttgccaaccagacaatctaga 32267486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 298
Target Start/End: Complemental strand, 41664728 - 41664657
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||| | ||||||||||  | ||||||||||||||||||||||||| |||||||| || ||||||||    
T  41664728 tttattaaacaaagattcaatggaatagattatacctgacggagctttgaaaaaggaaagtgcgtagacagg 41664657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 43249364 - 43249265
Alignment:
Q  27 tcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||| | ||| |||| ||| ||||||||||| ||  ||||||| ||||| |||| |||||||||||| ||||||||||||  ||||||||| ||||    
T  43249364 tcgccatagcgggcgactagaacactataccacaaccctactctatctaccaatatcctccaacaccatttacctaacaaagcaaaattaaactctctca 43249265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 330
Target Start/End: Complemental strand, 45255176 - 45255097
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 330  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||||| ||  |||||||  |||||||| | ||||||||    
T  45255176 agagattatacctgatggagctttgaagaatgaaagcgcatagacagacagcgaggtcagaacagactttaaaagaacca 45255097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 11393679 - 11393617
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 301  Q
    ||||||||||  ||||||||||||||| |||||||| ||||| ||||| ||||||||||||||    
T  11393679 agattcaatggaagagattatacctgatggagctttaaagaatgaaagagcatagacaggcaa 11393617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 8902422 - 8902483
Alignment:
Q  42 actaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaa 103  Q
    ||||| |||||||||||||| ||| ||||||| || |||||||||||||||||||| |||||    
T  8902422 actaacaccctataccacaagccagctctatcaactaacatccgccaacaccattttcctaa 8902483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 43612533 - 43612476
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagaca 296  Q
    ||||||||||  ||||||||||||||| |||||||| ||||| |||||||||||||||    
T  43612533 agattcaatggaagagattatacctgatggagctttcaagaatgaaagggcatagaca 43612476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 25090996 - 25091066
Alignment:
Q  56 ccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||| || |||||||| || |||| |||| ||||||||||||||||||||||| | |||||||| ||||    
T  25090996 ccacaacccctctctatcaactaacaaccgctaacaccatttccctaacaaagcaatgttaaactctctca 25091066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 346
Target Start/End: Complemental strand, 28453805 - 28453711
Alignment:
Q  252 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaaga 346  Q
    |||||||||||||| ||||||||||| || |||||||| ||||||||||  || | ||| ||||| || || |||| ||| ||||| ||||||||    
T  28453805 gagattatacctgagggagctttgaaaaaagaaagggcgtagacaggcagagatgacaaaacagatttaaggagaatcaagcgaccatcaaaaga 28453711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 43775131 - 43775057
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 301  Q
    |||||||||||||||||| || |  || |  |||||||||||||| |||||||||||||||||||| ||| ||||    
T  43775131 tttattaaaaatagattcgataaaggaaacgatacctgacggagccttgaagaaggaaagggcataaacatgcaa 43775057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 28992555 - 28992510
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagaca 296  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||    
T  28992555 agagattatacctgacgggactttgaagaaggaaagagcatagaca 28992510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 286
Target Start/End: Original strand, 8445596 - 8445652
Alignment:
Q  230 attaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaag 286  Q
    |||||| ||||||||||||  ||| || |||||||| ||||||||||||||||||||    
T  8445596 attaaatatagattcaatggaagaaatgatacctgaaggagctttgaagaaggaaag 8445652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 502
Target Start/End: Original strand, 11090445 - 11090501
Alignment:
Q  446 aagatcctctccatttataaattttttcatttgttgcaatttggagagagatagaca 502  Q
    ||||| || ||||||||||| |||||  |||||||||||||| ||||||||||||||    
T  11090445 aagattctttccatttataactttttctatttgttgcaatttagagagagatagaca 11090501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 7180011 - 7180066
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaa 103  Q
    |||||| |||| |||| ||| ||||||||||||| |||||||||||| ||||||||    
T  7180011 accctaaaccataaactatccctatccaccaacacccgccaacaccacttccctaa 7180066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 509
Target Start/End: Complemental strand, 26749687 - 26749629
Alignment:
Q  450 tcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||||||||||||||| | |||| |||||| | ||||||| ||||    
T  26749687 tcctctccatttataaattttttcatttgtttc-atttagagagataaagacacataaaa 26749629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 10530464 - 10530510
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacag 297  Q
    ||||||||||||||| ||||||||||| |||||||| ||||| ||||    
T  10530464 agagattatacctgaaggagctttgaaaaaggaaagtgcataaacag 10530510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 126
Target Start/End: Original strand, 12332485 - 12332527
Alignment:
Q  84 cgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||||||||| |||||||| ||| |||||||||||||||    
T  12332485 cgccaacaccatttgcctaacaacgcaatattaaactccctca 12332527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 13879008 - 13878954
Alignment:
Q  66 tctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaact 120  Q
    |||||||| || |||| |||||||||||||||||||| ||||||| | |||||||    
T  13879008 tctctatcaactaacaaccgccaacaccatttccctagcaaagcaatgttaaact 13878954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 37434477 - 37434391
Alignment:
Q  69 ctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcc 155  Q
    ||||| || |||| ||||||||||||||| || ||||||||| | |||||||| |||| |   || || ||||||||||||||||||    
T  37434477 ctatcaactaacagccgccaacaccattttcccaacaaagcaatgttaaactctctcaacctcctaacacccaaccctccatactcc 37434391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 43249152 - 43249090
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 301  Q
    ||||||||||| ||||||||||||||| ||| |||| |||||| |||| |||| || ||||||    
T  43249152 agattcaatgaaagagattatacctgatggaactttaaagaagaaaagagcatggataggcaa 43249090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 12135015 - 12135072
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagaca 296  Q
    ||||||||||  |||||||||||| || | |||||| ||||||||||| |||||||||    
T  12135015 agattcaatggaagagattatacccgatgaagctttaaagaaggaaagtgcatagaca 12135072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 24425355 - 24425416
Alignment:
Q  60 aaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactc 121  Q
    ||||| ||| ||||||| ||||||| ||| |||||||||||||||||||   ||||||||||    
T  24425355 aaaccctctttatccactaacatcctccaccaccatttccctaacaaagatatattaaactc 24425416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 509
Target Start/End: Original strand, 34612493 - 34612557
Alignment:
Q  444 tcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| ||||||||||||||||||||||| |||||||| | |||| |||||| | ||||||| ||||    
T  34612493 tcaatatcctctccatttataaatttttccatttgtt-ccatttagagagataaagacacataaaa 34612557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 460066 - 460142
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccct 124  Q
    |||||| ||||||||| ||||||||| ||||||| || |||| || |||| ||||| || |||  ||||||||||||    
T  460066 accctaaaccacaaactatctctatcaaccaacaacctccaatacaattttcctaataatgcataattaaactccct 460142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 12134881 - 12134977
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccattt 97  Q
    |||||||||||||||| | | |||  |||||||| | ||| |||||||    |||||||||||| ||||| | ||| ||||||| ||||||||||||    
T  12134881 ccccaacctccaacctccaagctacctcgccataacgggcgactaaaatatgataccacaaaccttctctcttcactaacatcctccaacaccattt 12134977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 17659385 - 17659493
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| | ||||| ||||||||| | ||| ||||| || | |||||| || |||   ||||| || | ||||| ||||||||| || ||    
T  17659385 ccccaacctccaacctcccacctacttcgccataacgggcgactaagactcgataccaaaagccactcctatcaactagcatcctccaacaccacttacc 17659484  T
Q  101 taacaaagc 109  Q
    |||||||||    
T  17659485 taacaaagc 17659493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 25320418 - 25320522
Alignment:
Q  54 taccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatact 153  Q
    |||||||| || ||| | ||||||||||||| |||||||||||| || ||||||| |  ||||||||| || | | | || || |||||||| |||| ||    
T  25320418 taccacaacccctctttgtccaccaacatcctccaacaccattttcccaacaaagaaaaattaaactctcttaaccgcctaacccccaaccccccatcct 25320517  T
Q  154 ccttt 158  Q
    |||||    
T  25320518 ccttt 25320522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 438 - 478
Target Start/End: Complemental strand, 31007829 - 31007789
Alignment:
Q  438 gaagggtcaagatcctctccatttataaattttttcatttg 478  Q
    ||||||||||||||||||||||||||||  |||| ||||||    
T  31007829 gaagggtcaagatcctctccatttataaccttttccatttg 31007789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 139; Significance: 2e-72; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 327721 - 327563
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  327721 ccccaacctccaacctgccacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 327622  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttc 159  Q
    |||||||||||||||||||||| ||| ||||||||| ||||| ||||||||||||||||    
T  327621 taacaaagcactattaaactccttcaactgtctcacccccaaacctccatactcctttc 327563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 312267 - 312109
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  312267 ccccaacctccaacctgccacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 312168  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttc 159  Q
    |||||||||||||||||||||| ||| ||||||||| ||||| ||||| ||||||||||    
T  312167 taacaaagcactattaaactccttcaactgtctcacccccaaacctccgtactcctttc 312109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 334
Target Start/End: Complemental strand, 312003 - 311926
Alignment:
Q  257 tatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccg 334  Q
    ||||||||| || ||  ||||||| |||||||||||||||||||  || ||||||||||| || | ||| ||||||||    
T  312003 tatacctgatggggcactgaagaaagaaagggcatagacaggcagagaagtcaagacagattttaaaagtaccaaccg 311926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 135; Significance: 4e-70; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 134440 - 134282
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  134440 ccccaacctccaacctgccacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 134341  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttc 159  Q
    |||||||||||||||||||||| ||| ||||||||| ||||| ||||| ||||||||||    
T  134340 taacaaagcactattaaactccttcaactgtctcacccccaaacctccgtactcctttc 134282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 334
Target Start/End: Complemental strand, 134175 - 134098
Alignment:
Q  257 tatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccg 334  Q
    ||||||||| || ||  ||||||| |||||||||||||||||||  || ||||||||||| || | ||| ||||||||    
T  134175 tatacctgatggggcactgaagaaagaaagggcatagacaggcagagaagtcaagacagattttaaaagtaccaaccg 134098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 4e-70; HSPs: 90)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 48 - 367
Target Start/End: Complemental strand, 27218661 - 27218342
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| || ||| ||||||| | ||||| ||||||||||||||| |||||||||||   |||||| | || || ||| ||||| |||| |||||    
T  27218661 accctataccaaaatccacctctatctatcaacaaccgccaacaccatttacctaacaaagctaaattaaatttccgcaactgcctcacccccagccctc 27218562  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    || ||||||||  ||||||||||||| || |||||| ||||||||||||||||||||||||||| |||||||       ||||||||| | |||||||||    
T  27218561 caaactccttttttaaacaaacagagctctaagcgatccaggaaattttcctgttatcctcactacctccccaaaaaaatttattaaacaaagattcaat 27218462  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagag 347  Q
    || ||| ||||||||||||||||| |||||||||||||| ||||||||| | |  || |||||||||||||| ||||||||||| |||||| | |||||     
T  27218461 gagagaaattatacctgacggagccttgaagaaggaaagtgcatagacatgaagcgaagtcaagacagacttaagaagaaccaagcgacccccgaaagat 27218362  T
Q  348 agaaagcgactttgccaccc 367  Q
    ||||| ||||||||||||||    
T  27218361 agaaaacgactttgccaccc 27218342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 45 - 394
Target Start/End: Complemental strand, 33821101 - 33820752
Alignment:
Q  45 aaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaacc 144  Q
    |||||||||||||| || |||||||| || |||| ||||| ||||||||||||  |||| |||||  ||||||||||| |||  ||||| || |||||||    
T  33821101 aaaaccctataccagaacccatctctgtctaccagcatcctccaacaccatttttctaataaagctatattaaactccatcaagtgtctgacccccaacc 33821002  T
Q  145 ctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattc 244  Q
    ||||| ||||||||||  ||||||||| | ||||||||| ||| |||||||||||||||| ||||||||||||||       ||| ||||||||| ||||    
T  33821001 ctccaaactcctttcgagaacaaacagtgctccaagcgagccaagaaattttcctgttattctcactccctccccaaaaatttttgttaaaaataaattc 33820902  T
Q  245 aatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaa 344  Q
    ||||  |||||| |||||||| ||||||||||||||||||||  |||||| |||||  ||||||| |||||| |||||||||| |||||||||| |||||    
T  33820901 aatggaagagataatacctgatggagctttgaagaaggaaagaacatagataggcagagaggtcaggacagaattgagaagaatcaaccgacccgcaaaa 33820802  T
Q  345 gagagaaagcgactttgccaccctgataatctagactttatagttttcaa 394  Q
    || ||||| ||  ||||||| |  || ||||||||||| ||||| |||||    
T  33820801 gatagaaaacggttttgccatctcgacaatctagacttaatagtattcaa 33820752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 48 - 344
Target Start/End: Complemental strand, 19544941 - 19544647
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||| ||| || || || |||||||    
T  19544941 accctataccaaaacccatctctatccaccaacatccgccaacaccatttgcctaataaggcactattaaactccctcaactgcctgacccctaaccctc 19544842  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    |||||||||| |||||||||| |||| ||||||  ||||||||| |||||||||| |||||| ||||||||        | ||||||||||||||| |||    
T  19544841 catactccttacgtaaacaaatagagctccaagaaacccaggaagttttcctgttctcctcattccctccc--aatttttgtattaaaaatagatttaat 19544744  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaa 344  Q
    || ||| || ||||  | ||||||||||||||||||||| |||||||||| ||  ||||| |||||| |||| || ||||||||||| ||| |||||    
T  19544743 gatagaaatgatactcggcggagctttgaagaaggaaagagcatagacagacagagaggttaagacaaacttaagtagaaccaaccggcccccaaaa 19544647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 45993129 - 45993515
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| | ||  |  |||||||| | ||| |||||||| |||||||| |||||| | |||||||| ||||||| |||||||||||||||    
T  45993129 ccccaacctccaacctcccacacacctcgccataacgggcgactaaaactctataccaaaaaccacccctatccactaacatcctccaacaccatttccc 45993228  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    ||  || |||  |||||||||| ||| |||||| || || ||||||||| |||||||  | | |||||||||||||||| | | ||| || ||||||||     
T  45993229 tagtaatgcaacattaaactccttcaactgtctaacccctaaccctccaaactccttctggagacaaacagagttccaacctatccaagacattttccta 45993328  T
Q  201 ttatcctcactccctccccnnnnnnnt-ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggc 299  Q
    | |||||||||||| ||||         |||||||| | |||||||| |  |||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  45993329 tgatcctcactcccaccccaaaaaaaaattattaaataaagattcaagggtagagattatacctgacggagctttgaagaaagaaagagcatagacaggc 45993428  T
Q  300 aatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctagactttata 386  Q
    |  |||||||| ||||| |||||||||||||| |||||  |||||||||| || ||||| | ||| ||||| | |||||||||||||    
T  45993429 agagaggtcaacacagatttgagaagaaccaaacgaccaccaaaagagaggaaacgactattccaacctgacagtctagactttata 45993515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 46626376 - 46626691
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||| |||| |||| ||||||||||||||||||||| ||    
T  46626376 ccccaacctccaacctgccacctaattcgccatacctggcaactaagacactataccacaaaccacctctgtccaacaacatccgccaacaccatttacc 46626475  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    |||||||||||||||||| ||| |||  |||||||| ||||| ||||||| |||||||    |||||||||  |||||  | |   | | |||||| ||     
T  46626476 taacaaagcactattaaattccttcaattgtctcacccccaaacctccattctcctttgtggaacaaacagttttccagcctatttaagtaatttttcta 46626575  T
Q  201 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    | ||||||||| || ||||        |||||||| | |||||||| |  |||||||||| |||| |||||||||||||| ||||||||||||||||| |    
T  46626576 tgatcctcacttcccccccaaaaaaaattattaaataaagattcaagggaagagattatatctgatggagctttgaagaaagaaagggcatagacaggta 46626675  T
Q  301 atgaggtcaagacaga 316  Q
      || |||||||||||    
T  46626676 gagaagtcaagacaga 46626691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 13440607 - 13440969
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  13440607 ccccaacctccaacctgccacctaattcgccatacctggcgactaaaacccgataccacaaaccacctctatccaccaacatccgccaacaccattttcc 13440706  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    |||||||||   |||||||||| |||  |  | |||  |||| || ||| ||||||||  |||||||||||  | ||||   | ||| |||||||||||     
T  13440707 taacaaagctaaattaaactccttcaatttccgcaccaccaaaccgccacactccttttttaaacaaacagtttgccaacttaaccaagaaattttccta 13440806  T
Q  201 ttatcctcactccctccc-----cnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagac 295  Q
    |||| ||||||||| |||     |        ||| |||| | ||| |||||    |||||||||||||  |||||||||||||||||||| ||||||||    
T  13440807 ttatactcactccccccccccctcaaaaaaaattaataaacaaagaatcaatagaggagattatacctgctggagctttgaagaaggaaagcgcatagac 13440906  T
Q  296 aggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgact 358  Q
    |||||  |||||||||||| | ||||| |||||||| |||||  || |||||||||| |||||    
T  13440907 aggcagagaggtcaagacatatttgagtagaaccaagcgaccaccacaagagagaaaccgact 13440969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 15653291 - 15653136
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||  ||||| |||| |||||||||||||||||||||||||| ||    
T  15653291 ccccaacctccaacctgccacctaattcgccatacctggcaactaagaccctatacca--aaccacctctgtccaccaacatccgccaacaccatttacc 15653194  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttc 159  Q
    |||||||||||||||||| ||| ||| ||||||||| ||||| ||||||| ||||||||    
T  15653193 taacaaagcactattaaattccttcaactgtctcac-cccaaacctccattctcctttc 15653136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 48 - 284
Target Start/End: Original strand, 34104078 - 34104314
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    ||||||||||| || || ||| |||||| |||||||| ||| ||||||||  |||  ||  ||||||||||||||||||  || || || || |||||||    
T  34104078 accctataccaaaacccctctttatccatcaacatcctccagcaccatttgtctagtaagacactattaaactccctcaaatgcctgacccctaaccctc 34104177  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    |||||||||| |||||||| | |||| ||||||| |||||||||||||||||||| ||||||| ||||||||       | |||||||||||||||||||    
T  34104178 catactccttacgtaaacatatagagctccaagcaacccaggaaattttcctgttctcctcacgccctccccaaaattttgtattaaaaatagattcaat 34104277  T
Q  248 gacagagattatacctgacggagctttgaagaaggaa 284  Q
    || ||| || |||| ||||||||||||||||||||||    
T  34104278 gatagaaatgatacttgacggagctttgaagaaggaa 34104314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 67 - 219
Target Start/End: Complemental strand, 39658907 - 39658755
Alignment:
Q  67 ctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaaca 166  Q
    |||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||||| | ||| ||||| ||||| |||||| ||||||||||||||||    
T  39658907 ctctatccaccaacatcctccaacaccatttccctaataaagcacaattaaattcccttaactgcctcacccccaatcctccaaactcctttcgtaaaca 39658808  T
Q  167 aacagagttccaagcgacccaggaaattttcctgttatcctcactccctcccc 219  Q
    ||| ||| ||||||| | |||| ||||||| ||||||||||||||||||||||    
T  39658807 aactgagctccaagcaatccagaaaatttttctgttatcctcactccctcccc 39658755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 439 - 509
Target Start/End: Complemental strand, 47080549 - 47080479
Alignment:
Q  439 aagggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47080549 aagggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 47080479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 47799857 - 47799925
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47799857 gggtcaagatcctctccatttataaatttttccatttgttgcaatttggagagagatagacacaaaaaa 47799925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 28528669 - 28528601
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  28528669 gggtcaagatcctctccatttataaatttttttatttgttgcaatttggagagagatagacaaaaaaaa 28528601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 377
Target Start/End: Original strand, 17721377 - 17721565
Alignment:
Q  189 gaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaaggg 288  Q
    |||||||| || |||||||||| ||||||||       ||||||||| | ||||||||||  ||||||||||||||||||||||||||| |||||||| |    
T  17721377 gaaatttttcttttatcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtg 17721476  T
Q  289 catagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgactttgccaccctgataatcta 377  Q
    |||||||||| |  |  |||| |||  |||| ||||||||||| |||||  ||||||| || || ||||||||||| || || ||||||    
T  17721477 catagacaggtagagcagtcaggacgaacttaagaagaaccaaacgaccaccaaaagaaaggaaccgactttgccaaccagacaatcta 17721565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 56 - 379
Target Start/End: Complemental strand, 4937659 - 4937336
Alignment:
Q  56 ccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcc 155  Q
    ||||||| |||| || ||||  |||| || |||||||||||| || ||||||||| | ||||||||||||| |    | || ||||||||||||||||||    
T  4937659 ccacaaagcatccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactcc 4937560  T
Q  156 tttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagaga 255  Q
    || |  | ||  | ||| | |||    ||||| || ||||| || || ||||||| ||||||||       ||||||||| | ||||||||||  |||||    
T  4937559 ttcctcatactcaaagaatcccacctaacccaagatatttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagaga 4937460  T
Q  256 ttatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcg 355  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| |  |  |||| ||||||||| ||||||| ||| |||||  | ||||| || || ||    
T  4937459 ttatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccg 4937360  T
Q  356 actttgccaccctgataatctaga 379  Q
    ||||||||| || || ||||||||    
T  4937359 actttgccaaccagacaatctaga 4937336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 440 - 509
Target Start/End: Original strand, 14696713 - 14696782
Alignment:
Q  440 agggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  14696713 agggtaaagatcctctccatttataattttttccatttgttgcaatttggagagagatagacacaaaaaa 14696782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 32520286 - 32520354
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  32520286 gggtaaagatcctctccatttataactttttccatttgttgcaatttggagagagatagacacaaaaaa 32520354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 441 - 504
Target Start/End: Original strand, 4269116 - 4269179
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  4269116 gggtcaagatcctctccatttataactttttccatttgttgcaatttggagagagatagacaca 4269179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 441 - 504
Target Start/End: Complemental strand, 32520448 - 32520385
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  32520448 gggtcaagatcctctccatttataactttttccatttgttgcaatttggagagagatagacaca 32520385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 78 - 298
Target Start/End: Original strand, 29968605 - 29968825
Alignment:
Q  78 aacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtc-tcactcccaaccctccatactcctttcgtaaacaaacagagttc 176  Q
    |||| ||||||||||||||| || ||||||||| |||||||||||||||  | || | || |||||||||||||||||||| || | ||  | ||  | |    
T  29968605 aacaaccgccaacaccatttacccaacaaagcaatattaaactccctcaa-tctcgtaacccccaaccctccatactccttccgcagactcaaagtatcc 29968703  T
Q  177 caagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttga 276  Q
    ||    ||||| || ||||| || || ||||||| ||||||||       ||||||||| | ||||||||||  ||||||||||||||||||||||||||    
T  29968704 cacctaacccaagatatttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttga 29968803  T
Q  277 agaaggaaagggcatagacagg 298  Q
    | |||||||| |||||||||||    
T  29968804 aaaaggaaagagcatagacagg 29968825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 30102612 - 30102544
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  30102612 gggtaaagatcctctccatttataactttttccatttgttgcaatttggagagagatagacaaaaaaaa 30102544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 298
Target Start/End: Complemental strand, 11276757 - 11276537
Alignment:
Q  78 aacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttcc 177  Q
    |||| ||||||||||||||| || | ||||||| | ||||||||||||| |    | || |||||||||||||||||||| || ||||  | ||  | ||    
T  11276757 aacaaccgccaacaccatttacccaccaaagcaatgttaaactccctcaacctcgtaacccccaaccctccatactccttccgcaaactcaaagtatccc 11276658  T
Q  178 aagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaa 277  Q
    |    ||||| || ||||| || || ||||||| ||||||||       ||||||||| | ||||||||||  |||||||||||||||||||||||||||    
T  11276657 acctaacccaagatatttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaa 11276558  T
Q  278 gaaggaaagggcatagacagg 298  Q
     |||||||| |||||||||||    
T  11276557 aaaggaaagtgcatagacagg 11276537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 441 - 504
Target Start/End: Original strand, 30102430 - 30102493
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  30102430 gggtcaagatcctctccatttataaccttttccatttgttgcaatttggagagagatagacaca 30102493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 446 - 509
Target Start/End: Complemental strand, 31236280 - 31236217
Alignment:
Q  446 aagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||    
T  31236280 aagatcctctccatttataatttttttcatgtgttgcaatttggagagagatagacaaaaaaaa 31236217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 23887681 - 23887795
Alignment:
Q  45 aaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaacc 144  Q
    |||||||||||||| ||  || |||| || |||| ||||| |||||||||||| |||||||||||  ||||||||||||||| |||||| || |||||||    
T  23887681 aaaaccctataccagaactcacctctgtctaccagcatcctccaacaccattttcctaacaaagctatattaaactccctcaactgtctgacccccaacc 23887780  T
Q  145 ctccatactcctttc 159  Q
    ||||| |||| ||||    
T  23887781 ctccaaactcatttc 23887795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 23898857 - 23898971
Alignment:
Q  45 aaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaacc 144  Q
    |||||||||||||| ||  || |||| || |||| ||||| |||||||||||| |||||||||||  ||||||||||||||| |||||| || |||||||    
T  23898857 aaaaccctataccagaactcacctctgtctaccagcatcctccaacaccattttcctaacaaagctatattaaactccctcaactgtctgacccccaacc 23898956  T
Q  145 ctccatactcctttc 159  Q
    ||||| |||| ||||    
T  23898957 ctccaaactcatttc 23898971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 447 - 509
Target Start/End: Complemental strand, 30588647 - 30588585
Alignment:
Q  447 agatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||    
T  30588647 agatcctctccatttataaatttttccatttgttgcaatttgggaagagatagacacaaaaaa 30588585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 455 - 509
Target Start/End: Complemental strand, 35737217 - 35737163
Alignment:
Q  455 tccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35737217 tccatttataaatttttccatttgttgcaatttggagagagatagacacaaaaaa 35737163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 447 - 504
Target Start/End: Complemental strand, 14696890 - 14696833
Alignment:
Q  447 agatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  14696890 agatcctctccatttataactttttccatttgttgcaatttggagagagatagacaca 14696833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 441 - 500
Target Start/End: Complemental strand, 19027822 - 19027763
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagataga 500  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||    
T  19027822 gggtcaagatcctcttcatttataactttttccatttgttgcaatttggagagagataga 19027763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 442 - 509
Target Start/End: Original strand, 19888992 - 19889059
Alignment:
Q  442 ggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||| |||||||||||||||||||||||| |||||||||||||| || ||||||||| ||||||||    
T  19888992 ggtcaacatcctctccatttataaatttttttatttgttgcaatttagaaagagatagatacaaaaaa 19889059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 441 - 500
Target Start/End: Original strand, 20726814 - 20726873
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagataga 500  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||    
T  20726814 gggtcaagatcctcttcatttataactttttccatttgttgcaatttggagagagataga 20726873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 227 - 334
Target Start/End: Complemental strand, 41805119 - 41805012
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    |||| |||||||||| |||| |  ||| ||||||||||||| ||| ||||||||||| || ||||||||||| |  ||||||||||||||||| ||||||    
T  41805119 tttagtaaaaatagagtcaagggaagaaattatacctgacgaagccttgaagaaggagagagcatagacaggtagagaggtcaagacagactttagaaga 41805020  T
Q  327 accaaccg 334  Q
    || |||||    
T  41805019 actaaccg 41805012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 333
Target Start/End: Complemental strand, 25018662 - 25018556
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    |||| |||||||||| |||| |  ||| ||||||||||||| ||| ||||||||||||||  |||||| ||| || ||||||||||||||||| ||||||    
T  25018662 tttagtaaaaatagagtcaagggaagaaattatacctgacgaagccttgaagaaggaaagaacatagataggtaaagaggtcaagacagactttagaaga 25018563  T
Q  327 accaacc 333  Q
    || ||||    
T  25018562 actaacc 25018556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 39931153 - 39931011
Alignment:
Q  30 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagct 129  Q
    |||||||| || || || |||||| |||||||| |||| |  ||||| ||||  |||||||||||||| ||||||| |||| |||||| |||||||| |     
T  39931153 ccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaagctccctcaacc 39931054  T
Q  130 gtctcactcccaaccctccatactcctttcgtaaacaaacaga 172  Q
      || || ||||||||||||||||||||||  |||||||||||    
T  39931053 tcctaacccccaaccctccatactcctttctcaaacaaacaga 39931011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 5327317 - 5327474
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    ||||| |||||||||| | |||||  |||||||| | ||| ||||||||    ||||| ||||| ||||||||||| ||||||| |||||||||||||||    
T  5327317 ccccagcctccaacctcccacctacctcgccatatcgggcgactaaaacatggtaccataaaccttctctatccactaacatcctccaacaccatttccc 5327416  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactccttt 158  Q
    ||  ||||||  |||||||||| ||| ||  || ||||||||||| || | |||||||    
T  5327417 tagtaaagcaagattaaactccttcaacttcctaactcccaacccccctttctccttt 5327474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 13553770 - 13553645
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| |  || |  |||||||| | ||| |||| ||| ||||||||||| ||  ||||||| |||||||||| ||||||||||||  |    
T  13553770 ccccaacctccaacctccctccaacctcgccataacgggcgactagaacactataccacaaccctactctatctaccaacatcctccaacaccatttatc 13553671  T
Q  101 taacaaagcactattaaactccctca 126  Q
    ||||||||||  ||||||||||||||    
T  13553670 taacaaagcaaaattaaactccctca 13553645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 41340091 - 41340208
Alignment:
Q  5 aacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaac 104  Q
    |||||||||||| | |||||  |||||||| | ||| ||||||||    ||||||||||| ||||||||||| ||||||| |||||||||||||||||      
T  41340091 aacctccaacctcccacctacctcgccatatcgggcgactaaaacatggtaccacaaaccttctctatccactaacatcctccaacaccatttccctagt 41340190  T
Q  105 aaagcactattaaactcc 122  Q
    ||||||  ||||||||||    
T  41340191 aaagcaaaattaaactcc 41340208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 4269296 - 4269240
Alignment:
Q  440 agggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagaga 496  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  4269296 agggtaaagattctctccatttataatttttttcatttgttgcaatttggagagaga 4269240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 41340330 - 41340398
Alignment:
Q  228 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagaca 296  Q
    |||||||| | ||||||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||    
T  41340330 ttattaaataaagattcaatggaagagattataccttacgaagctttgaagaaggaaagggcatagaca 41340398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 20918561 - 20918731
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    |||||||||||||||||  ||||||| || |||| || | |||||||||| |||| ||||||| | |||||||||  ||  |  || || ||||||||||    
T  20918561 accctataccacaaacctcctctatctactaacaacctcgaacaccattttcctagcaaagcagtgttaaactcctgcattttcctaac-cccaaccctc 20918659  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctcccc 219  Q
     | ||||||||| ||||||||||   |||||| | |  || ||||||||||| |||||||||||||||||||    
T  20918660 tagactcctttcctaaacaaacatttttccaaccaatgcaagaaattttcctattatcctcactccctcccc 20918731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 158
Target Start/End: Original strand, 17856302 - 17856439
Alignment:
Q  20 acctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaac 119  Q
    ||||| ||||||||| | ||| ||||||||   ||||||||| || ||||||||||| ||||||| ||||||||||||||||| ||| ||   |||||||    
T  17856302 acctatttcgccataacgggcgactaaaacatgataccacaatccttctctatccactaacatcctccaacaccatttccctagcaatgctacattaaac 17856401  T
Q  120 tccctcagctgtctcactcccaaccctccatactccttt 158  Q
    ||| ||| ||  || || |||||||||||| ||||||||    
T  17856402 tccttcaacttcctgac-cccaaccctccaaactccttt 17856439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 18767962 - 18768261
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | ||||| || |||||| | ||  |||||||||  ||||||||| || |||||||| || ||||||| |||||||||||| ||    
T  18767962 cccccacctccaacctcccacctactttgccataacgggagactaaaacctgataccacaacccttctctatcaactaacatcctccaacaccatttacc 18768061  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    ||  |||||| ||||||||||| |||     || || ||||| |||||| ||||||||    |||| | ||| | |||| | | ||| | |||||| ||     
T  18768062 tagtaaagcaatattaaactccttcaatctcctaacccccaaacctccaaactcctttttagaacacaaagaatcccaacctatccaagtaatttttcta 18768161  T
Q  201 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
      |||||||||||| ||||        ||||| || | ||||||||||  ||||||||||| ||  |||||||||||||| ||||| |||||||||||||    
T  18768162 caatcctcactcccaccccagaaaaaattattcaataaagattcaatggaagagattatacttgttggagctttgaagaaagaaagagcatagacaggca 18768261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 19735310 - 19735372
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 301  Q
    ||||||||||  ||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  19735310 agattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacaggcaa 19735372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 31423211 - 31423281
Alignment:
Q  56 ccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||||||| ||||| || |||| |||||||||||||||||| ||||||||||| |||||||| ||||    
T  31423211 ccacaaaccatccctatcaactaacaaccgccaacaccatttccccaacaaagcactgttaaactctctca 31423281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 364
Target Start/End: Complemental strand, 45164900 - 45164770
Alignment:
Q  234 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 333  Q
    |||||||| || |||  ||||||| ||||||  ||||| |||||||||||||| ||||||||||| |  | ||||||||||||||| | ||||| ||| |    
T  45164900 aaaatagaatctatggaagagattgtacctgctggagccttgaagaaggaaagagcatagacaggtagcgcggtcaagacagactttaaaagaatcaagc 45164801  T
Q  334 gaccctcaaaagagagaaagcgactttgcca 364  Q
    ||||  |||| || ||||| |||||||||||    
T  45164800 gacctccaaaggaaagaaaccgactttgcca 45164770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 316
Target Start/End: Complemental strand, 28173331 - 28173254
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacaga 316  Q
    ||||||||||  |||||| ||| |||||||||||||||||||  |||| |||||||||| |||||||||||| |||||    
T  28173331 agattcaatggaagagataatatctgacggagctttgaagaaaaaaagagcatagacagacaatgaggtcaaaacaga 28173254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 34232505 - 34232573
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 319  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||| |||  |||||||  ||||||||    
T  34232505 agagattatacctgatggagctttgaagaaggaaagcgcatagacaagcagagaggtcagaacagactt 34232573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 19027636 - 19027708
Alignment:
Q  441 gggtcaagatcctctccatttataa----attttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| ||||||||||||||||||||     ||||| |||||||| ||||||||||||||||||||||||||||    
T  19027636 gggtaaagatcctctccatttataactttctttttccatttgttacaatttggagagagatagacacaaaaaa 19027708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 19735122 - 19735197
Alignment:
Q  51 ctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    ||||||||||||||  ||||||| |||||||||| |||||||||||| |||||||| |||  |||||||| |||||    
T  19735122 ctataccacaaacctactctatcgaccaacatcctccaacaccatttacctaacaatgcaaaattaaacttcctca 19735197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 20727000 - 20726928
Alignment:
Q  441 gggtcaagatcctctccatttataa----attttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| ||||||||||||||||||||     ||||| |||||||| ||||||||||||||||||||||||||||    
T  20727000 gggtaaagatcctctccatttataactttctttttccatttgttacaatttggagagagatagacacaaaaaa 20726928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 23054318 - 23054259
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||||  |||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  23054318 agattcaatggaagagattatacctgacagagctttaaagaaggaaagtgcatagacagg 23054259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 36227499 - 36227440
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||||  ||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  36227499 agattcaatggaagaaattatacctgatggagctttgaagaaagaaagggcatagacagg 36227440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 2820261 - 2820185
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctc 125  Q
    |||||||||||||||||  |||||||||  |||||||||||||| || ||||||||||||| |  |||||||||||||    
T  2820261 accctataccacaaaccc-ctctatccagtaacatccgccaacatcacttccctaacaaagtaagattaaactccctc 2820185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 4078081 - 4078130
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  4078081 agagattatacctgatggagctctgaagaaggaaagcgcatagacaggca 4078130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 337
Target Start/End: Original strand, 4164775 - 4164929
Alignment:
Q  183 acccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaagg 282  Q
    ||||||| |||||| || | |||||||||||| ||||       |||| | |||||||||||||||  ||||||||||||||  |||||| |||| || |    
T  4164775 acccaggcaatttttctatgatcctcactcccaccccaaaaaaatttaattaaaatagattcaatggaagagattatacctgcgggagctctgaaaaaag 4164874  T
Q  283 aaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacc 337  Q
    ||||||| ||||||||||  || | || ||||||||| || |||| ||| |||||    
T  4164875 aaagggcgtagacaggcagcgaagacaggacagacttaaggagaatcaagcgacc 4164929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 449 - 509
Target Start/End: Complemental strand, 33057268 - 33057207
Alignment:
Q  449 atcctctccatttataaatttttt-catttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||| |||||| | ||||||| |||||||||||||||||||||| ||||    
T  33057268 atcctctccatttataattttttttcgtttgttgtaatttggagagagatagacacacaaaa 33057207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 337
Target Start/End: Original strand, 34207066 - 34207220
Alignment:
Q  183 acccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaagg 282  Q
    ||||||| |||||| || | |||||||||||| ||||       |||| | |||||||||||||||  ||||||||||||||  |||||| |||| || |    
T  34207066 acccaggcaatttttctatgatcctcactcccaccccaaaaaaatttaattaaaatagattcaatggaagagattatacctgcgggagctctgaaaaaag 34207165  T
Q  283 aaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacc 337  Q
    ||||||| ||||||||||  || | || ||||||||| || |||| ||| |||||    
T  34207166 aaagggcgtagacaggcagcgaagacaggacagacttaaggagaatcaagcgacc 34207220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 34457744 - 34457623
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | ||||| || |||||| | ||  |||||||||  ||||||||| || |||||||| || ||||||  |||||||||||| ||    
T  34457744 cccccacctccaacctcccacctactttgccataacgggtgactaaaacctgataccacaacccttctctatcaactaacatcacccaacaccatttacc 34457645  T
Q  101 taacaaagcactattaaactcc 122  Q
    ||  |||||| |||||||||||    
T  34457644 tagtaaagcaatattaaactcc 34457623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 298
Target Start/End: Complemental strand, 34792004 - 34791964
Alignment:
Q  258 atacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  34792004 atacctgagggagctttgaagaaggaaagggcatagacagg 34791964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 31423386 - 31423433
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaag 286  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  31423386 agattcaatggaagagattatacctgacggagctttgaaaaaggaaag 31423433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 298
Target Start/End: Original strand, 45871543 - 45871614
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||| |||||||||||   ||| || |||||||| |||||||||||||||||||| ||||| |||||    
T  45871543 tttattaaatatagattcaatagaagaaataatacctgaaggagctttgaagaaggaaagagcataaacagg 45871614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 330
Target Start/End: Original strand, 17056334 - 17056412
Alignment:
Q  252 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 330  Q
    |||||||||||||| || ||| ||||||||||||  ||||||||||| |  |||| |||||||||||| || |||||||    
T  17056334 gagattatacctgatggtgctctgaagaaggaaaaagcatagacaggaagagaggacaagacagacttaaggagaacca 17056412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 2820057 - 2820012
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagaca 296  Q
    |||||||||||||||||| |||||||||||||||||  ||||||||    
T  2820057 agagattatacctgacggggctttgaagaaggaaagaacatagaca 2820012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 234 - 327
Target Start/End: Complemental strand, 6335745 - 6335652
Alignment:
Q  234 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 327  Q
    |||| |||||| |||  ||||||| ||| ||  ||||| |||||||||||||| ||||||||||| || |  |||||||||||||| |||||||    
T  6335745 aaaagagattctatggaagagattgtacatgctggagccttgaagaaggaaagagcatagacaggtaacgcagtcaagacagactttagaagaa 6335652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 18671952 - 18672021
Alignment:
Q  228 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacag 297  Q
    |||||||| | ||||||||||  |||||||||||||||   ||||||||||||||||||  |||||||||    
T  18671952 ttattaaataaagattcaatggaagagattatacctgatatagctttgaagaaggaaagatcatagacag 18672021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 29917024 - 29917069
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagaca 296  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||||    
T  29917024 agagattgtacctgagggagctttgaagaaggaaagtgcatagaca 29917069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 39930932 - 39930887
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagaca 296  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||||    
T  39930932 agagattatacatgatggagctttgaagaaggaaagagcatagaca 39930887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 2678881 - 2678822
Alignment:
Q  67 ctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||||||||||||  | |||||||||| |||||||||| |  ||||||||||||||    
T  2678881 ctctatccaccaacatcgtcaaacaccattttcctaacaaagaaaaattaaactccctca 2678822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 22819047 - 22818976
Alignment:
Q  257 tatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 328  Q
    ||||||||| |||||| ||||||||||||| ||||||||||| |  |||| || ||||| ||| ||||||||    
T  22819047 tatacctgatggagctctgaagaaggaaagtgcatagacaggaagagaggacaggacagccttaagaagaac 22818976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 394
Target Start/End: Original strand, 23887829 - 23887920
Alignment:
Q  303 gaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctagactttatagttttcaa 394  Q
    ||||||| ||||||||||||||||| ||| || ||| ||||||| ||||| |  |||||||| |  || ||||||||||| ||||| |||||    
T  23887829 gaggtcaggacagacttgagaagaatcaatcggcccccaaaagatagaaaccagctttgccatctcgacaatctagacttgatagtattcaa 23887920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 28740293 - 28740222
Alignment:
Q  229 tattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    |||| ||||||||||||||    | |||||||||| | |||||||||||||||||||| ||||| |||||||    
T  28740293 tatttaaaatagattcaatagatgggattatacctaagggagctttgaagaaggaaagagcataaacaggca 28740222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 509
Target Start/End: Complemental strand, 989209 - 989179
Alignment:
Q  479 ttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||||||||||||||||||||||||||    
T  989209 ttgcaatttggagagagatagacacaaaaaa 989179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 20562828 - 20562882
Alignment:
Q  72 tccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    ||||||||||||| |||||||||||| ||||||||| ||  |||||| |||||||    
T  20562828 tccaccaacatcctccaacaccatttacctaacaaaacaacattaaagtccctca 20562882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 509
Target Start/End: Original strand, 47271142 - 47271172
Alignment:
Q  479 ttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||||||||||||||||||||||||||    
T  47271142 ttgcaatttggagagagatagacacaaaaaa 47271172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 4344630 - 4344695
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcata 292  Q
    ||||||||| |||||||||||   ||||||||||| ||| ||||||||||| ||| ||| ||||||    
T  4344630 tttattaaacatagattcaatagaagagattatacatgagggagctttgaaaaagaaaatggcata 4344695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 11341379 - 11341476
Alignment:
Q  30 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagc-actattaaactccctca 126  Q
    |||||||| ||| | || ||||||||||| || || | |||||  |||||||||| |||||||||||| ||||||| ||| |  ||||||||||||||    
T  11341379 ccatacctagcagccaacaccctataccaaaatccctatctataaaccaacatcctccaacaccattttcctaacatagctaaaattaaactccctca 11341476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 18671724 - 18671825
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | ||||| ||||||||| |  || ||||||||   ||||||||| ||  ||||||| || ||||||| |||||||||||| ||    
T  18671724 cccccacctccaacctcccacctacttcgccataacgagcgactaaaacatgataccacaaccctgctctatcaactaacatcctccaacaccatttacc 18671823  T
Q  101 ta 102  Q
    ||    
T  18671824 ta 18671825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 29375687 - 29375756
Alignment:
Q  55 accacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccct 124  Q
    ||||||||| ||| |  ||||||||||||||||||||||| |||||||  || ||  |||||||||||||    
T  29375687 accacaaactatcccgctccaccaacatccgccaacaccacttccctagtaacgccatattaaactccct 29375756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 36227736 - 36227615
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | ||||| |||||||||||  || |||| |||  | ||||| ||||| |||||||| || ||||||| |||| |||| || ||    
T  36227736 cccccacctccaacctcccacctacttcgccataccgcgcgactagaacattgtaccataaaccttctctatcaactaacatcctccaataccacttacc 36227637  T
Q  101 taacaaagcactattaaactcc 122  Q
    ||  ||||||  ||||||||||    
T  36227636 tagtaaagcaacattaaactcc 36227615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 319
Target Start/End: Original strand, 45460099 - 45460184
Alignment:
Q  234 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 319  Q
    |||||||||| ||||  ||||||||||||||  |||||| |||| || |||||||| || ||||||| ||| | || |||||||||    
T  45460099 aaaatagattaaatggtagagattatacctgcgggagctctgaaaaaagaaagggcgtatacaggcagtgaagacaggacagactt 45460184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 219
Target Start/End: Complemental strand, 6335904 - 6335772
Alignment:
Q  87 caacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgaccc 186  Q
    ||||||||||| || ||||| ||   ||| ||||||| || ||| || ||||| ||||| || |||||||||   |||||||||||  ||||| | ||||    
T  6335904 caacaccatttacccaacaatgcctcattgaactcccgcaactgcctaactcctaaccccccgtactcctttttcaaacaaacagacctccaacctaccc 6335805  T
Q  187 aggaaattttcctgttatcctcactccctcccc 219  Q
    | ||||||||||| |  ||||||||||| ||||    
T  6335804 aagaaattttcctatgttcctcactcccccccc 6335772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 477
Target Start/End: Original strand, 8256408 - 8256440
Alignment:
Q  445 caagatcctctccatttataaattttttcattt 477  Q
    ||||||||||||||||||||||||||| |||||    
T  8256408 caagatcctctccatttataaatttttccattt 8256440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 166
Target Start/End: Original strand, 9895537 - 9895617
Alignment:
Q  86 ccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaaca 166  Q
    |||||||||||| |||| |||| || ||||||| ||||| | ||  |||||  ||||||||||||||||||| || |||||    
T  9895537 ccaacaccatttacctagcaaatcaatattaaattcccttaacttcctcaccgccaaccctccatactccttacgcaaaca 9895617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 18317194 - 18317138
Alignment:
Q  230 attaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaag 286  Q
    |||||||||||||| || || ||||||||||| ||| || || ||||||||||||||    
T  18317194 attaaaaatagatttaaggatagagattatacttgagggggccttgaagaaggaaag 18317138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 159
Target Start/End: Complemental strand, 32815835 - 32815743
Alignment:
Q  67 ctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttc 159  Q
    |||||||| ||| ||||| ||||||||||||  |||| | |||| ||||||||||||||| | |  | || |||||||| ||| |||||||||    
T  32815835 ctctatccgccatcatcctccaacaccatttttctaaaagagcaatattaaactccctcatccggttaacccccaacccaccaaactcctttc 32815743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 479 - 507
Target Start/End: Complemental strand, 33450587 - 33450559
Alignment:
Q  479 ttgcaatttggagagagatagacacaaaa 507  Q
    |||||||||||||||||||||||||||||    
T  33450587 ttgcaatttggagagagatagacacaaaa 33450559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 479 - 507
Target Start/End: Original strand, 34985940 - 34985968
Alignment:
Q  479 ttgcaatttggagagagatagacacaaaa 507  Q
    |||||||||||||||||||||||||||||    
T  34985940 ttgcaatttggagagagatagacacaaaa 34985968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 37942207 - 37942143
Alignment:
Q  234 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    |||| |||||||||   |||||| ||||| ||||| |||||||||||||||| | ||||||||||    
T  37942207 aaaagagattcaatataagagataatacccgacggggctttgaagaaggaaatgacatagacagg 37942143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 40681823 - 40681747
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccct 124  Q
    ||||||||||||||||  ||  | || | ||||| | |||||||||| |||||||| || |||||||||||||||||    
T  40681823 accctataccacaaactctccttttcaatcaacaactgccaacaccacttccctaataatgcactattaaactccct 40681747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 47800048 - 47799981
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||| ||| ||||||||||||||||||| |||||||| | |||| |||||| | ||||||| ||||    
T  47800048 gggtcaatatcatctccatttataaatttttccatttgtt-ctatttagagagataaagacacataaaa 47799981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 126; Significance: 9e-65; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 10 - 219
Target Start/End: Complemental strand, 4133 - 3924
Alignment:
Q  10 ccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagc 109  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4133 ccaacctgccacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacagagc 4034  T
Q  110 actattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctca 209  Q
    ||||||||||||| ||| ||||||||| ||||| |||||||||||||||  | |||||| ||  |||||  | | ||||  ||||||||| | |||||||    
T  4033 actattaaactccttcaactgtctcacccccaaacctccatactccttttttgaacaaatagttttccatcctatccagctaattttcctatgatcctca 3934  T
Q  210 ctccctcccc 219  Q
    ||||| ||||    
T  3933 ctcccccccc 3924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 316
Target Start/End: Complemental strand, 3878 - 3819
Alignment:
Q  257 tatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacaga 316  Q
    ||||||||| |||||||||||||| |||||||||||||||||||  || |||||||||||    
T  3878 tatacctgatggagctttgaagaaagaaagggcatagacaggcagagaagtcaagacaga 3819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 3e-58; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 45422074 - 45422389
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||| || | |||||||||||||||||||||||||| ||    
T  45422074 ccccaacctccaacctgccacctaattcgccatacctggcaactaagacactataccacaaaccacctttgtccaccaacatccgccaacaccatttacc 45422173  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    |||||||||||||||||| ||| ||| ||||||||| ||||| ||||||| |||||||    |||||||||  |||||  | | ||| | |||||| ||     
T  45422174 taacaaagcactattaaattccttcaactgtctcacccccaaacctccattctcctttgtggaacaaacagttttccagcctatccaagtaatttttcta 45422273  T
Q  201 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    | ||||||||  || ||||        | |||||| | |||||||| |  ||| ||||||||||| |||||||||||||| ||||||||||||||||| |    
T  45422274 tgatcctcacatcccccccaaaaaaaatgattaaataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggta 45422373  T
Q  301 atgaggtcaagacaga 316  Q
      || |||||||||||    
T  45422374 gagaagtcaagacaga 45422389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 86 - 436
Target Start/End: Complemental strand, 33583928 - 33583579
Alignment:
Q  86 ccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacc 185  Q
    |||||||||||| | |||||||||  ||||||||||||||| ||| || || ||||||||||||||||||||| |||||||||||||| ||||||| | |    
T  33583928 ccaacaccatttacttaacaaagctatattaaactccctcaactgccttacccccaaccctccatactccttttgtaaacaaacagagctccaagcaatc 33583829  T
Q  186 caggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaa 285  Q
    ||||||||||||||||||||||||| |||||             |||||||| |||||| |||  ||||||||||||||||||||||||||| |||||||    
T  33583828 caggaaattttcctgttatcctcacaccctctaaaaaaaaaaaaattaaaaacagattc-atggaagagattatacctgacggagctttgaaaaaggaaa 33583730  T
Q  286 gggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctagactttat 385  Q
    | ||||||||||| |  ||||||| |||| ||||||||| ||| ||||| ||| |  | || ||||| |||||||||||||| || |||||||| || ||    
T  33583729 gagcatagacaggaagcgaggtcaggacaaacttgagaaaaacgaaccggcccccggatgatagaaatcgactttgccaccccgacaatctagatttaat 33583630  T
Q  386 agttttcaacacaagttcccaaaaggctaacctcttcggatcaccaccaat 436  Q
    |||   || |||| |||| ||||| |||||||||   |||||||| |||||    
T  33583629 agtagacaccacatgttctcaaaacgctaacctccgaggatcacctccaat 33583579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 47 - 366
Target Start/End: Original strand, 11196951 - 11197271
Alignment:
Q  47 aaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccct 146  Q
    |||||||||||| || ||  |||||||||||| ||| |||||||||||||| ||||||||||| |||||||| |||  || |   || || |||||||||    
T  11196951 aaccctataccataacccgcctctatccaccatcattcgccaacaccatttgcctaacaaagcgctattaaattcctgcaacctccttacccccaaccct 11197050  T
Q  147 ccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctcccc-nnnnnnntttattaaaaatagattca 245  Q
    ||||||||| | |  |||||||||||| ||||||| | | |||||||||||||||||||||||||||||||||        | ||||||| |||||||||    
T  11197051 ccatactccctacacaaacaaacagagctccaagcaatctaggaaattttcctgttatcctcactccctccccaaaaaaaatgtattaaacatagattca 11197150  T
Q  246 atgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaag 345  Q
    |||| ||||||||||||||||||||| |||||||| ||||| ||||| |||   ||   ||||| ||||||||| ||||| |||||||||||  || | |    
T  11197151 atgatagagattatacctgacggagccttgaagaatgaaagagcataaacaaataacacggtcaggacagacttcagaaggaccaaccgacctccatatg 11197250  T
Q  346 agagaaagcgactttgccacc 366  Q
    | ||||| || ||||||||||    
T  11197251 aaagaaaacggctttgccacc 11197271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 45 - 436
Target Start/End: Original strand, 6824009 - 6824398
Alignment:
Q  45 aaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaacc 144  Q
    |||||||||||||| || ||  |||||||||||||||| | |||||||||||| | ||| || ||   |||||||||| ||| ||| |||||||||||||    
T  6824009 aaaaccctataccagaaccccgctctatccaccaacattctccaacaccatttgcttaataaggctaaattaaactccttcaactgcctcactcccaacc 6824108  T
Q  145 ctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattc 244  Q
    || ||| |||||||  | |||||| ||| ||| |||| | | |||||||||||||||||||||||||||||||||       |||  |||||||| | ||    
T  6824109 cttcatgctccttttttgaacaaatagaattctaagcaatcgaggaaattttcctgttatcctcactccctccccaatttttttttgtaaaaataaaatc 6824208  T
Q  245 aatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaa 344  Q
    ||||| ||| || |||| |||||||||||||||||||||||| |||||||||||  | | ||||| |||||| || |||||||| || || ||  | |||    
T  6824209 aatgagagaaataatacttgacggagctttgaagaaggaaagtgcatagacagg--aagcggtcaggacagatttaagaagaactaaacggcctccgaaa 6824306  T
Q  345 gagagaaagcgactttgccaccctgataatctagactttatagttttcaacacaagttcccaaaaggctaacctcttcggatcaccaccaat 436  Q
    || | ||||||| |||||||||| | || ||||||||| ||| |   || |||| ||||||||||| |||| || |  |||||||| |||||    
T  6824307 gataaaaagcgaatttgccaccccgttagtctagacttaatattagacaccacaggttcccaaaagactaatctgtgtggatcacctccaat 6824398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 10 - 379
Target Start/End: Original strand, 13551133 - 13551514
Alignment:
Q  10 ccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagc 109  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||| || ||||||| ||||||| || ||||||||||||||||||||| ||    
T  13551133 ccaacctgccacctaattcgccatatctggcaactaaaaccctataccacaaatcacctctatcaaccaacaacctccaacaccatttccctaacaatgc 13551232  T
Q  110 actattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctca 209  Q
      ||||||||||| |||     ||||| ||||| || ||| ||||||||  |||||||||||  | ||||   | ||| || |||||||| |||||||||    
T  13551233 tatattaaactccttcaatctcctcacccccaaaccgccacactccttttttaaacaaacagtttgccaacttaaccaagatattttcctattatcctca 13551332  T
Q  210 ctccctcccc------------nnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacag 297  Q
    ||||| ||||                    ||| |||| | |||||||||    |||||||||||||| |||||||||||||||||||| ||||||||||    
T  13551333 ctccccccccccccccaaaaaaaaaaaaaattaataaacaaagattcaatagaggagattatacctgatggagctttgaagaaggaaagtgcatagacag 13551432  T
Q  298 gcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgactttgccaccctgataatctaga 379  Q
    |||| ||||||| |||||| |||||||||||||| |||||  ||||||| ||||| ||||| | ||| ||||| | ||||||    
T  13551433 gcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacctgacagtctaga 13551514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 15018231 - 15018561
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| | || || ||||||||| |  || |||||||| |||||||| || ||| | ||||||||  ||| || |||||||||||||||    
T  15018231 ccccaacctccaacctcccacatacttcgccataacgagcgactaaaactctataccaaaatccacccctatccactgacaacctccaacaccatttccc 15018330  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    ||| || ||| ||||||||||| ||| |||||| || |  ||||||||| |||||||| | | |||||||||  ||||||| | ||| || ||||||||     
T  15018331 taataaggcaatattaaactccttcaactgtctaacccataaccctccaaactccttttggagacaaacagaactccaagctatccaagatattttccta 15018430  T
Q  201 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    | |||||||| |||  |||         ||||||| | ||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||     
T  15018431 taatcctcacccccatcccaaaaaaaaatattaaataaagattcaatggtagagattatacctgacggagctttgaagaaggaaagtgcatagacaggcc 15018530  T
Q  301 atgaggtcaagacagacttgagaagaaccaa 331  Q
      || ||||||||||  ||||||| ||||||    
T  15018531 gagaagtcaagacagctttgagaacaaccaa 15018561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 26894198 - 26893985
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||| || | |||||||||||||||||||||||||| ||    
T  26894198 ccccaacctccaacctgccacctatttcgccatacctggcgactaaaaccctataccacaaaccacctatgtccaccaacatccgccaacaccattttcc 26894099  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    ||||||||    |||||||||| ||| ||  | ||| ||||| ||  ||||||||| |  |||||||||||  | ||||   | ||| |||||||||||     
T  26894098 taacaaagttaaattaaactccttcaacttccgcacccccaaaccgtcatactcctcttttaaacaaacagtttgccaacttaaccaagaaattttccta 26893999  T
Q  201 ttatcctcactccc 214  Q
    ||||||||||||||    
T  26893998 ttatcctcactccc 26893985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 26899637 - 26899424
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||| || | |||||||||||||||||||||||||| ||    
T  26899637 ccccaacctccaacctgccacctatttcgccatacctggcgactaaaaccctataccacaaaccacctatgtccaccaacatccgccaacaccattttcc 26899538  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    ||||||||    |||||||||| ||| ||  | ||| ||||| ||  ||||||||| |  |||||||||||  | ||||   | ||| |||||||||||     
T  26899537 taacaaagttaaattaaactccttcaacttccgcacccccaaaccgtcatactcctcttttaaacaaacagtttgccaacttaaccaagaaattttccta 26899438  T
Q  201 ttatcctcactccc 214  Q
    ||||||||||||||    
T  26899437 ttatcctcactccc 26899424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 10 - 214
Target Start/End: Original strand, 13550680 - 13550884
Alignment:
Q  10 ccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagc 109  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||| || ||||||| ||||||| || ||||||||||||||||||||| ||    
T  13550680 ccaacctgccacctaattcgccatatctggcaactaaaaccctataccacaaatcacctctatcaaccaacaacctccaacaccatttccctaacaatgc 13550779  T
Q  110 actattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctca 209  Q
      ||||||||||| |||     ||||| ||||| || ||| ||||||||  |||||||||||  | ||||   | ||| || |||||||| |||||||||    
T  13550780 tatattaaactccttcaatctcctcacccccaaaccgccacactccttttttaaacaaacagtttgccaacttaaccaagatattttcctattatcctca 13550879  T
Q  210 ctccc 214  Q
    |||||    
T  13550880 ctccc 13550884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 27 - 333
Target Start/End: Original strand, 26146795 - 26147101
Alignment:
Q  27 tcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||| || || || || |||||||||||||||| |   || ||||||||||  |||||||||||||| |||||||| |||  ||||||||||||||    
T  26146795 tcgccatatctcgccaccaacaccctataccacaaactactcctctccaccaacaaacgccaacaccatttgcctaacaacgcaacattaaactccctca 26146894  T
Q  127 gctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnn 226  Q
         | ||| ||||| ||||||  |||| | ||  |||||| || | |||||  |||||| |||| |||||| | ||||||||  || ||||           
T  26146895 aactccgcacacccaaacctccaacctccctccgcgaacaaatagtggtccaacggacccaagaaagtttcctatgatcctcacagcccccccaaaaaaa 26146994  T
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    |||| |||||||||| |||| |  ||| ||||||||||||||||| |||||||||||||| ||||||||||| |  ||||||||||||||||| ||||||    
T  26146995 tttagtaaaaatagagtcaacggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttagaaga 26147094  T
Q  327 accaacc 333  Q
    || ||||    
T  26147095 actaacc 26147101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 23459803 - 23459871
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23459803 gggtcaagatcctctccatttataaatttttccatttgttgcaatttggagagagatagacacaaaaaa 23459871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 29188772 - 29188704
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29188772 gggtcaagatcctctccatttataaatttttccatttgttgcaatttggagagagatagacacaaaaaa 29188704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 3354737 - 3354805
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  3354737 gggtcaagatcctctccatttataaatttttccatttgttgtaatttggagagagatagacacaaaaaa 3354805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 441 - 504
Target Start/End: Original strand, 3594794 - 3594857
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3594794 gggtcaagatcctctccatttataacttttttcatttgttgcaatttggagagagatagacaca 3594857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 448 - 509
Target Start/End: Complemental strand, 8988966 - 8988905
Alignment:
Q  448 gatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8988966 gatcctctccatttataaatttttttatttgttgcaatttggagagagatagacacaaaaaa 8988905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 375111 - 375043
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  375111 gggttaagatcctctccatttataaatttctccatttgttgcaatttggagagagatagacacaaaaaa 375043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 27 - 158
Target Start/End: Complemental strand, 11234050 - 11233919
Alignment:
Q  27 tcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||| | ||| |||| ||| ||||||||||||||  ||||||| |||||||||  |||||||||||| ||||||||||||  ||||||||||||||    
T  11234050 tcgccataacgggcgactagaacactataccacaaacctactctatctaccaacatcgtccaacaccatttacctaacaaagcaaaattaaactccctca 11233951  T
Q  127 gctgtctcactcccaaccctccatactccttt 158  Q
     ||  || || |||||||||||| ||||||||    
T  11233950 acttcctaacccccaaccctccagactccttt 11233919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 28400136 - 28399837
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | ||||| ||||||||| |  || |||||||||  ||||||||  || |||||||| || ||||||| |||||||||||| ||    
T  28400136 cccccacctccaacctcccacctacttcgccataacgagcgactaaaacctgataccacatcccttctctatcgactaacatcctccaacaccatttacc 28400037  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    ||  |||||| ||||||||||| |||   | || || ||||| |||||| ||||||||  | |||| | ||| | |||| | | ||| | |||||| ||     
T  28400036 tagtaaagcaatattaaactccttcaatcgcctaacccccaaacctccaaactccttttttgaacacaaagaatcccaacctatccaagtaatttttcta 28399937  T
Q  201 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
      |||||||||||| ||||        ||||| || | ||||||||||  ||||||||||||||  |||||||||||||| ||||| |||||||||||||    
T  28399936 caatcctcactcccaccccaaaaaaaattattcaataaagattcaatggaagagattatacctgctggagctttgaagaaagaaagagcatagacaggca 28399837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 439 - 504
Target Start/End: Complemental strand, 40254290 - 40254225
Alignment:
Q  439 aagggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    |||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40254290 aaggatcaagatcctcttcatttataacttttttcatttgttgcaatttggagagagatagacaca 40254225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 13780617 - 13780549
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| ||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||    
T  13780617 gggtaaagatcctctccatttataacattttccatttgttgcaatttggagagagatagacacaaaaaa 13780549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 41435160 - 41435228
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||    
T  41435160 gggtaaagatcctctccatttataactttttttatttgttacaatttggagagagatagacacaaaaaa 41435228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 42380312 - 42380248
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaa 505  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  42380312 gggttaagatcctctccatttataactttttccatttgttgcaatttggagagagatagacacaa 42380248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 441 - 504
Target Start/End: Complemental strand, 41435342 - 41435279
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    |||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  41435342 gggtcaagattctctccatttataactttttccatttgttgcaatttggagagagatagacaca 41435279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 446 - 507
Target Start/End: Original strand, 40254111 - 40254172
Alignment:
Q  446 aagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaa 507  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  40254111 aagatcctctccatttataactttttccatttgttgcaatttggggagagatagacacaaaa 40254172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 44028753 - 44028588
Alignment:
Q  54 taccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatact 153  Q
    |||||||| |||||||||||||| ||||||| ||| ||||| || |||| ||| ||   |||||||||| ||| |||||| || ||||| ||||||||||    
T  44028753 taccacaacccatctctatccactaacatcctccagcaccacttacctagcaacgcctcattaaactccttcaactgtctaacacccaaacctccatact 44028654  T
Q  154 cctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctcccc 219  Q
    ||||||||||||| ||| |  ||||  | ||||| || ||||| || | |||||||| ||||||||    
T  44028653 cctttcgtaaacacacatacctccatcctacccaagatatttttctataatcctcaccccctcccc 44028588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 3594976 - 3594908
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||| ||||||    
T  3594976 gggtaaagatcctctccatttataactttttccatttattgcaatttggagagagatagacaaaaaaaa 3594908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 35488391 - 35488700
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||| ||||||||||| | ||||| ||||||||| | ||| ||||||||   ||||||||| || |||||||| || |||| || |||||||||||| ||    
T  35488391 cccccacctccaacctcccacctacttcgccataacgggcgactaaaacatgataccacaacccttctctatcaactaacaacctccaacaccatttacc 35488490  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    ||  ||||||  |||||||||| ||| ||  || || ||||| ||||||| |||| ||    |||| ||||  |||||| | | ||| |||||||| ||     
T  35488491 tagtaaagcaacattaaactccttcaacttcctaacccccaaacctccatgctccattttagaacacacagtattccaacctatccaagaaatttttcta 35488590  T
Q  201 ttatcctcactccctccccnnnnnnnt-ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggc 299  Q
      | |||||||||| ||||         ||||| || | ||||||||||  ||||||||||||||| |||||||| ||||||||||  ||||||||||||    
T  35488591 aaaacctcactcccaccccaaaaaaaaattattcaataaagattcaatggaagagattatacctgaaggagctttaaagaaggaaaaagcatagacaggc 35488690  T
Q  300 aatgaggtca 309  Q
    || |||||||    
T  35488691 aaagaggtca 35488700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 441 - 504
Target Start/End: Original strand, 6287979 - 6288042
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| |||||    
T  6287979 gggtcaagatcctctccatttataacttttttcattggttgcaatttagagagagataaacaca 6288042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 441 - 504
Target Start/End: Original strand, 13780435 - 13780498
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    |||||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||||    
T  13780435 gggtcaagatcctctccatttataaccttttccacttgttgcaatttggagagagatagacaca 13780498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 333
Target Start/End: Original strand, 43310839 - 43311145
Alignment:
Q  27 tcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||| || || || || |||||||||||||||| |   || |||||||| |  |||||||||||||| |||||||| |||  ||||||||||||||    
T  43310839 tcgccatatctcgccaccaacaccctataccacaaactactcctctccaccaataaacgccaacaccatttgcctaacaacgcaacattaaactccctca 43310938  T
Q  127 gctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnn 226  Q
     |   | ||  ||||| |||||   |||| | ||  |||||| || | |||||  |||||| |||| |||||| | ||||||||  || ||||           
T  43310939 acctccgcatacccaatcctccgacctccctccgagaacaaatagtggtccaactgacccaagaaagtttcctataatcctcacagcccccccaaaattt 43311038  T
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    |||| |||||||||| |||| |  ||| ||||||||||||||||| |||||||||||||| ||||||||||| |  ||| | || |||||||| ||||||    
T  43311039 tttagtaaaaatagagtcaagggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagagataaaaacagactttagaaga 43311138  T
Q  327 accaacc 333  Q
    || ||||    
T  43311139 actaacc 43311145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 6288163 - 6288095
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||||||||||||| || ||  ||||||||||||||||||||||||||||| ||||||    
T  6288163 gggtaaagatcctctccatttataacttcttctatttgttgcaatttggagagagatagacaaaaaaaa 6288095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 449 - 509
Target Start/End: Complemental strand, 8008795 - 8008735
Alignment:
Q  449 atcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||| ||||||    
T  8008795 atcctcttcatttataacttttttcatttgttgcaatttggagagagataaacaaaaaaaa 8008735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 23464303 - 23464370
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||| ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  23464303 gggtgaagatcctcttcatttataaatttattcatttgttgtaatttggagagagat-gacacaaaaaa 23464370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 331
Target Start/End: Complemental strand, 25380730 - 25380650
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaa 331  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||| |||||   | ||||||||||| ||||||||||||||    
T  25380730 agagattatacctgatggagctttgaagaaagaaagtgcatagagaggcagataagtcaagacagatttgagaagaaccaa 25380650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 327
Target Start/End: Original strand, 34357588 - 34357688
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    |||| |||||||| ||||||||  ||| |||||| || ||||||| |||||||||||||| ||||||||||| ||  ||||||| | |||||||||||||    
T  34357588 tttactaaaaataaattcaatggaagaaattatatctaacggagccttgaagaaggaaagagcatagacaggtaaaaaggtcaaaagagacttgagaaga 34357687  T
Q  327 a 327  Q
    |    
T  34357688 a 34357688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 9668592 - 9668296
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| |  || |  |||||||| | ||| |||| ||| ||||||||||| ||  ||||||| |||||||||| ||||||| |||| ||    
T  9668592 ccccaacctccaacctccctccaacctcgccataacgggcgactagaacactataccacaaccctactctatctaccaacatcctccaacactatttacc 9668493  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    ||||||||||   ||||||||||||| |   || || ||||||||| || |||||||| |  |||| | ||  |||||| | | ||| | ||||||||      
T  9668492 taacaaagcaaagttaaactccctcaacctcctaacccccaacccttcagactcctttggagaacacaaagtattccaacctatccaagtaattttccga 9668393  T
Q  201 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacag 297  Q
       ||||||||||| ||||        ||||| || | ||||||||||  |||||||||| |||| |||||||| |||||||| || ||||||||||    
T  9668392 cggtcctcactccccccccaaaaaaaattattcaacaaagattcaatggaagagattatatctgatggagctttaaagaaggacagagcatagacag 9668296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 364
Target Start/End: Original strand, 13416473 - 13416603
Alignment:
Q  234 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 333  Q
    ||||||||||| |||  ||||||| ||||||  ||||| |||||||||||||| ||||||||| | |  | |||||||| |||||| ||||||| ||| |    
T  13416473 aaaatagattctatggaagagattgtacctgctggagccttgaagaaggaaagagcatagacatgtagcgcggtcaagatagactttagaagaatcaagc 13416572  T
Q  334 gaccctcaaaagagagaaagcgactttgcca 364  Q
    ||||  |||| || ||||| |||||||||||    
T  13416573 gacctccaaatgaaagaaaccgactttgcca 13416603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 364
Target Start/End: Complemental strand, 2207323 - 2207045
Alignment:
Q  86 ccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacc 185  Q
    ||||||||| ||||||||||| ||   |||||||||||||| | |||| ||||| ||||| |||||||||||||    ||||||    | |||| | |||    
T  2207323 ccaacaccacttccctaacaacgcctcattaaactccctcaaccgtctaactcctaacccaccatactcctttctcttacaaactcgttgccaacccacc 2207224  T
Q  186 caggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaa 285  Q
    || |||||||| |    |||||||||||| ||||       ||||   |||||||| ||||||  ||||||| ||||||  ||||| |||||||||||||    
T  2207223 caagaaatttttcgaagatcctcactccccccccaaaaaaatttagataaaatagaatcaatggaagagattgtacctgctggagccttgaagaaggaaa 2207124  T
Q  286 gggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcgactttgcca 364  Q
    | ||||||||||| |  | || |||||| ||||| | ||||| ||| |||||  |||| || ||||| |||||||||||    
T  2207123 gagcatagacaggtagcgcggacaagacggactttacaagaatcaaacgacctccaaaggaaagaaaccgactttgcca 2207045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 298
Target Start/End: Original strand, 14440345 - 14440595
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    |||||| ||||||||||| | ||||| || ||||  ||||||||||||||| | |||| |||| | |||||||| |||| |   || || ||||||||||    
T  14440345 accctacaccacaaaccacccctatcaactaacaaacgccaacaccatttcaccaacagagcaatgttaaactctctcaacctcctaacacccaaccctc 14440444  T
Q  148 catactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaat 247  Q
    |||||||| | |  ||||| | |||  ||||| | ||||| ||||| || || || |||||||  || ||||       |||||| || | |||||||||    
T  14440445 catactccctcctcaaacacaaagaactccaaccaacccaagaaatctttcttttttcctcacaacccccccaaaaaaatttatttaacaaagattcaat 14440544  T
Q  248 gacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
       |||||||||||||||||||||||| || |||||||| ||||| |||||    
T  14440545 agaagagattatacctgacggagctttaaaaaaggaaagtgcataaacagg 14440595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 12646122 - 12646229
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctc 147  Q
    |||||||||||||| ||||||||||| || |||| || |||||||||||| ||||||||| ||   |||||||| |||| |   || || ||||||||||    
T  12646122 accctataccacaatccatctctatctactaacaacctccaacaccattttcctaacaaaacaaagttaaactctctcaacctcctaacacccaaccctc 12646221  T
Q  148 catactcc 155  Q
    ||||||||    
T  12646222 catactcc 12646229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 12646342 - 12646401
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||||  |||||||||||||| |||||||||||| |||||||| |||||||||||    
T  12646342 agattcaatggaagagattatacctggcggagctttgaaaaaggaaagagcatagacagg 12646401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 331
Target Start/End: Complemental strand, 22724786 - 22724695
Alignment:
Q  240 gattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaa 331  Q
    |||||||||  ||||||||||||| ||| |||||| ||||||||||| |||||||||| ||  ||||||| ||| || || |||||||||||    
T  22724786 gattcaatggtagagattatacctaacgaagctttaaagaaggaaagagcatagacagacagagaggtcatgactgatttaagaagaaccaa 22724695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 3153172 - 3153106
Alignment:
Q  234 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    |||||||||||||||  ||||||||||||||  ||||||||||| || |||||||| ||||||||||    
T  3153172 aaaatagattcaatggaagagattatacctgcgggagctttgaaaaaagaaagggcgtagacaggca 3153106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 8065609 - 8065551
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacag 297  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||||  ||||||||||    
T  8065609 agattcaatggaagagattatacctgatggagctttgaagaaggaaaaagcatagacag 8065551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 36804699 - 36804793
Alignment:
Q  27 tcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactc 121  Q
    |||||||| | ||| |||||||| | |||||||||||| ||||| || || ||||||| |||||||||||| ||||  |||||| ||||||||||    
T  36804699 tcgccataacgggcgactaaaacacgataccacaaaccttctctctctactaacatcctccaacaccattttcctagtaaagcaatattaaactc 36804793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 10689346 - 10689419
Alignment:
Q  255 attatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 328  Q
    ||||||| ||||||| | |||||||||||||| ||||||||||| |  |||||||||||| |||| ||||||||    
T  10689346 attatacatgacggatccttgaagaaggaaagagcatagacaggtagagaggtcaagacatactttagaagaac 10689419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 11028424 - 11028572
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    ||||| |||||||||| | ||||| |||||| || | ||| |||||||| |  ||||||||||||   ||||| || | ||||| ||||||||| || ||    
T  11028424 ccccatcctccaaccttccacctacttcgccgtaacgggcgactaaaactcggtaccacaaaccactcctatcaacaagcatcctccaacaccactttcc 11028523  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctcca 149  Q
    |||||||||   |||||||||| ||| ||||||||| || || ||||||    
T  11028524 taacaaagcctgattaaactccttcaactgtctcacccctaaacctcca 11028572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 21579629 - 21579705
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccct 124  Q
    |||| |||||||||   ||| |||||||||| || || ||||||||| |||||||| ||||||||||||||||||||    
T  21579629 acccgataccacaagttatccctatccaccagcaacctccaacaccacttccctaataaagcactattaaactccct 21579705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 13138961 - 13139016
Alignment:
Q  53 ataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaag 108  Q
    |||||||||||||||| |||| ||||||| || ||| |||||||||||||||||||    
T  13138961 ataccacaaaccatctatatcaaccaacaacctccagcaccatttccctaacaaag 13139016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 298
Target Start/End: Complemental strand, 33515529 - 33515482
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||| ||||||||||||||||||| |||||||| |||||||||||    
T  33515529 agagattgtacctgacggagctttgaaaaaggaaagtgcatagacagg 33515482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 33515764 - 33515673
Alignment:
Q  30 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactc 121  Q
    |||||||| || || || ||||||  |||||| ||||||||||| || |||| ||| |||||||||||||||| ||||||| | ||||||||    
T  33515764 ccatacctagccaccaacaccctacgccacaacccatctctatcaactaacaaccgtcaacaccatttccctagcaaagcaatgttaaactc 33515673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 43722380 - 43722321
Alignment:
Q  233 aaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcata 292  Q
    ||||||||| ||||||  ||| ||||||||||||||||| |||||||||||||| |||||    
T  43722380 aaaaatagaatcaatggaagaaattatacctgacggagccttgaagaaggaaagagcata 43722321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 352
Target Start/End: Complemental strand, 4222257 - 4222175
Alignment:
Q  270 gctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaa 352  Q
    ||||||||||||||||| ||||||||| | |  |||| || ||||||||||||||||||||  |||||| |||| || |||||    
T  4222257 gctttgaagaaggaaagagcatagacaagaatggaggacatgacagacttgagaagaaccagacgacccccaaatgaaagaaa 4222175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 11233837 - 11233775
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 301  Q
    ||||||||||  ||||| ||||||||| |||||||| ||||||||||| ||||| ||||||||    
T  11233837 agattcaatggaagagactatacctgatggagctttaaagaaggaaagagcataaacaggcaa 11233775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 20004560 - 20004638
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    ||||||||||||||| |  | ||||| || ||||||| ||||||||||||  ||||||||||| | |||||||||||||    
T  20004560 accctataccacaaatctcccctatcaactaacatcctccaacaccatttttctaacaaagcagtgttaaactccctca 20004638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 28253521 - 28253578
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagaca 296  Q
    ||||||||||  ||||||||||||||||| | ||||||| |||||||| |||||||||    
T  28253521 agattcaatggaagagattatacctgacgaaactttgaaaaaggaaagtgcatagaca 28253578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 234 - 319
Target Start/End: Complemental strand, 44028566 - 44028481
Alignment:
Q  234 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 319  Q
    |||| |||||||||   ||||||||||| ||| ||||| |||||||||||||| ||||||||||  |  | |||||||||||||||    
T  44028566 aaaagagattcaatagaagagattatacatgatggagccttgaagaaggaaagagcatagacagatagagcggtcaagacagactt 44028481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 2282605 - 2282665
Alignment:
Q  270 gctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 330  Q
    ||||||||||||||||||||||| ||||| |  ||||||| ||||||||| |||| |||||    
T  2282605 gctttgaagaaggaaagggcatacacaggaagagaggtcatgacagacttaagaataacca 2282665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 20946918 - 20946838
Alignment:
Q  258 atacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 338  Q
    |||||||||||||||||||| || ||||||||||| |||||||| || | || |||||| || || | |||||| ||||||    
T  20946918 atacctgacggagctttgaaaaaagaaagggcataaacaggcaacgacgacaggacagatttcagtaaaaccaagcgaccc 20946838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 158
Target Start/End: Complemental strand, 25380971 - 25380823
Alignment:
Q  10 ccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagc 109  Q
    ||||||| | |||||  |||||||| | ||| |||||||  |||||||| |||||| | |||||||| || |||| | | ||||||||||  || || ||    
T  25380971 ccaacctcccacctacctcgccataacgggcgactaaaattctataccaaaaaccacccctatccactaatatcctctagcaccatttccacaataaggc 25380872  T
Q  110 actattaaactccctcagctgtctcactcccaaccctccatactccttt 158  Q
    |  |||||| ||| ||| |||||| || | |||||||||||||||||||    
T  25380871 aacattaaattccttcaactgtctaaccctcaaccctccatactccttt 25380823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 40430015 - 40430070
Alignment:
Q  48 accctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaa 103  Q
    |||||| ||||||||| ||| ||||||| ||||| |||||||||||| ||||||||    
T  40430015 accctaaaccacaaactatccctatccatcaacacccgccaacaccacttccctaa 40430070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 509
Target Start/End: Complemental strand, 2063434 - 2063404
Alignment:
Q  479 ttgcaatttggagagagatagacacaaaaaa 509  Q
    |||||||||||||||||||||||||||||||    
T  2063434 ttgcaatttggagagagatagacacaaaaaa 2063404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 234 - 364
Target Start/End: Complemental strand, 6724985 - 6724855
Alignment:
Q  234 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 333  Q
    |||||||| || |||  ||||||| ||||||  ||||| |||||||||||||| ||||||||||| |    | |||||||| |||| | ||||| ||| |    
T  6724985 aaaatagaatctatggaagagattgtacctgctggagccttgaagaaggaaagagcatagacaggtagcacgatcaagacatactttaaaagaatcaaac 6724886  T
Q  334 gaccctcaaaagagagaaagcgactttgcca 364  Q
    ||||  |||| || ||||| |||||||||||    
T  6724885 gacctccaaatgaaagaaaccgactttgcca 6724855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 168
Target Start/End: Original strand, 9006414 - 9006492
Alignment:
Q  90 caccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaa 168  Q
    |||||||| ||||| || ||||||||||||||||||| |||  | || || ||||||| ||||||| | ||||||||||    
T  9006414 caccatttgcctaataaggcactattaaactccctcaactgcatgacccctaaccctcaatactccctacgtaaacaaa 9006492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 10289395 - 10289325
Alignment:
Q  258 atacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 328  Q
    |||| ||| |||||||||||||||||||| ||||||||||| |  ||||||| ||| ||||| || |||||    
T  10289395 atacttgagggagctttgaagaaggaaagagcatagacaggaagcgaggtcaggaccgacttcaggagaac 10289325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 337
Target Start/End: Complemental strand, 12605803 - 12605693
Alignment:
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    |||||||||||||||||||||    || |  || |||| |||||||||||| || ||||||||||| ||||||||  | | || ||||||||| || |||    
T  12605803 tttattaaaaatagattcaatagaggaaacgatgcctggcggagctttgaaaaatgaaagggcataaacaggcaacaatgacatgacagactttagcaga 12605704  T
Q  327 accaaccgacc 337  Q
    ||||| |||||    
T  12605703 accaaacgacc 12605693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 298
Target Start/End: Complemental strand, 18669552 - 18669506
Alignment:
Q  252 gagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||||||||  ||||||||||||| |||||||| ||||||||    
T  18669552 gagattatacctgagagagctttgaagaaagaaagggcgtagacagg 18669506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 471
Target Start/End: Complemental strand, 36402419 - 36402389
Alignment:
Q  441 gggtcaagatcctctccatttataaattttt 471  Q
    |||||||||||||||||||||||||||||||    
T  36402419 gggtcaagatcctctccatttataaattttt 36402389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 478 - 508
Target Start/End: Original strand, 36758855 - 36758885
Alignment:
Q  478 gttgcaatttggagagagatagacacaaaaa 508  Q
    |||||||||||||||||||||||||||||||    
T  36758855 gttgcaatttggagagagatagacacaaaaa 36758885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 145
Target Start/End: Original strand, 37437606 - 37437688
Alignment:
Q  63 ccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccc 145  Q
    ||||| ||||| || ||||  ||||||||||||||||| ||||||||  | ||||||||||||| || ||| || ||||||||    
T  37437606 ccatcactatcaactaacagacgccaacaccatttccccaacaaagcggtgttaaactccctcaactttctaacccccaaccc 37437688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 7301297 - 7301342
Alignment:
Q  81 atccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||| ||||||||| || ||||||||||||||||||||||| ||||    
T  7301297 atccaccaacaccagttacctaacaaagcactattaaactctctca 7301342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 8008622 - 8008691
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttc-atttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||| ||||||||| ||||||  ||||||||  |||||||||||| |||||| ||||||    
T  8008622 gggttaagatcctcttcatttataacttttttttatttgttgtgatttggagagaggtagacaaaaaaaa 8008691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 43722585 - 43722504
Alignment:
Q  45 aaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||||||||| |||| |   || || ||||| | ||||||||||||||| |||||||| |||  ||||||||||||||    
T  43722585 aaaaccctataccataaactactcctctctaccaataaccgccaacaccatttacctaacaacgcaacattaaactccctca 43722504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 8988783 - 8988850
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||| ||||||||||||||||||||| | |||||||| | |||| |||||| | ||||||| ||||    
T  8988783 gggtcaatatcctctccatttataaatttctccatttgtt-ccatttagagagataaagacacataaaa 8988850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 8158 - 8473
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||||||||||||| ||    
T  8158 ccccaacctccaatctgccacctaattcgccatacctagcaactaagacactataccacaaaccacctctgtccaccaacatccgccaacaccatttacc 8257  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctg 200  Q
    |||||||||||||||||| ||| ||| ||||||||| ||||| ||||||| |||||||    ||||||||   |||||  | | ||| | |||||| ||     
T  8258 taacaaagcactattaaattccttcaactgtctcacccccaaacctccattctcctttgtggaacaaacaattttccagcctatccaagtaatttttcta 8357  T
Q  201 ttatcctcac-tccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggc 299  Q
    | |||||||| ||||| |||        | |||||| | |||||||| |  ||| ||||||||||| |||||||||||||| |||||||||||||||||     
T  8358 tgatcctcacatccct-cccaaaaaaaatgattaaataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggt 8456  T
Q  300 aatgaggtcaagacaga 316  Q
    |  || |||||||||||    
T  8457 agagaagtcaagacaga 8473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 51 - 366
Target Start/End: Complemental strand, 63835 - 63521
Alignment:
Q  51 ctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccat 150  Q
    |||||||| |||  |||| | |||| |||||||||||||||||||||||||| ||||||   |||||||||||||| ||| || || ||||||||||||     
T  63835 ctataccaaaaattatctttgtccatcaacatccgccaacaccatttccctagcaaagctaaattaaactccctcaactgcctaacccccaaccctccac 63736  T
Q  151 actcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgac 250  Q
     ||||||  ||||||||| |||| | ||||  | |||||||||||||||||||||||||||||||||||        || | ||||||||||||||||      
T  63735 cctccttcagtaaacaaatagagcttcaagtaaaccaggaaattttcctgttatcctcactccctccccaaaaaaaatt-taaaaaatagattcaatgga 63637  T
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagaga 350  Q
    ||||||||||||||| | ||| |||||||||||||| ||||| ||||| |   ||||||||||||| || ||||| |||||||  ||| ||||||| ||     
T  63636 agagattatacctgaagaagccttgaagaaggaaagagcataaacaggaagcaaggtcaagacagattttagaaggaccaaccagcccccaaaagatagg 63537  T
Q  351 aagcgactttgccacc 366  Q
    |||||||| |||||||    
T  63536 aagcgactctgccacc 63521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 27 - 333
Target Start/End: Original strand, 28354 - 28660
Alignment:
Q  27 tcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctca 126  Q
    |||||||| || || || || |||||||||||||||| |   || ||||||||||  |||||||||||||| |||||||| |||  ||||||||||||||    
T  28354 tcgccatatcttgccaccaacaccctataccacaaactactcctctccaccaacaaacgccaacaccatttgcctaacaacgcagcattaaactccctca 28453  T
Q  127 gctgtctcactcccaaccctccatactcctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnn 226  Q
     ||  | ||| ||||| ||||||  |||| | ||| |||||| || | ||||   |||||| |||| |||||| | ||||||||  || ||||           
T  28454 acttccgcacacccaaacctccaacctccctccgtgaacaaatagtggtccagcggacccaagaaagtttcctatgatcctcacagcccccccaaaaaaa 28553  T
Q  227 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 326  Q
    |||| |||||||||| |||| |  ||| ||||||||||||||||| |||||||||||||| ||||||||||| |  ||||||||||||||||| ||||||    
T  28554 tttagtaaaaatagagtcaacggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttagaaga 28653  T
Q  327 accaacc 333  Q
    || ||||    
T  28654 actaacc 28660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 56 - 298
Target Start/End: Original strand, 153 - 395
Alignment:
Q  56 ccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcc 155  Q
    |||||| ||||||||||| || |||| || ||||||||||||||||||||||||| | |||||||| |||| |   || || ||||||||||||||||||    
T  153 ccacaatccatctctatctactaacaacctccaacaccatttccctaacaaagcaatgttaaactctctcaacctcctaacacccaaccctccatactcc 252  T
Q  156 tttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagaga 255  Q
     | |  ||||| | ||| |||||| | | ||| |||||||| || || |||||||| || ||||       |||||| || | |||||||||   |||||    
T  253 ctcctcaaacacaaagaattccaaccaatccaagaaatttttcttttttcctcactacccccccaaaaaaatttatttaacaaagattcaattgaagaga 352  T
Q  256 ttatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    |||||| ||||||||||||||| |||||||| |||||||||||    
T  353 ttatacttgacggagctttgaaaaaggaaagagcatagacagg 395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 42 - 327
Target Start/End: Original strand, 6683 - 6971
Alignment:
Q  42 actaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactccca 141  Q
    |||||||||||||||||||||||  |||  || |||||||||| |||||| || || |||||||| ||  |||| || ||| ||| ||| ||||| ||||    
T  6683 actaaaaccctataccacaaaccgcctcgctctaccaacatcctccaacatcacttgcctaacaaggcggtattgaattccttcaactgcctcaccccca 6782  T
Q  142 accctccatactcctttcgt---aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaat 238  Q
    | || |||| | | |||  |   ||||||| |||| |||||   | |||||||||||||||||||  ||||| |||||||          ||||||||||    
T  6783 aaccaccatccgcttttttttttaaacaaatagagctccaataaatccaggaaattttcctgttagactcacaccctcccaaaaaaaaagtattaaaaat 6882  T
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 327  Q
    ||||||||||| ||| || |||||||||||||||||||| |||||||| ||||||||||| |  |||||||||||| | ||||||||||    
T  6883 agattcaatgagagaaatgatacctgacggagctttgaaaaaggaaagagcatagacaggaagcgaggtcaagacatatttgagaagaa 6971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 56 - 379
Target Start/End: Complemental strand, 105374 - 105051
Alignment:
Q  56 ccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcc 155  Q
    ||||||| |||| || ||||  |||| || |||||||||||| || ||||||||| | ||||||||||||| |    | || ||||||||||||||||||    
T  105374 ccacaaagcatccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactcc 105275  T
Q  156 tttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagaga 255  Q
    || |  | ||  | ||| | |||    ||||| || ||||| || || ||||||| ||||||||       ||||||||| | ||||||||||  |||||    
T  105274 ttcctcatactcaaagaatcccacctaacccaagatatttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagaga 105175  T
Q  256 ttatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccctcaaaagagagaaagcg 355  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| |  |  |||| ||||||||| ||||||| ||| |||||  | ||||| || || ||    
T  105174 ttatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccg 105075  T
Q  356 actttgccaccctgataatctaga 379  Q
    ||||||||| || || ||||||||    
T  105074 actttgccaaccagacaatctaga 105051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 4657 - 4725
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  4657 gggtaaagatcctctccatttataactttttccatttgttgcaatttggagagagatagacacaaaaaa 4725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 444 - 504
Target Start/End: Complemental strand, 4836 - 4776
Alignment:
Q  444 tcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacaca 504  Q
    |||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  4836 tcaagatcctctccatttataactttttccatttgttgtaatttggagagagatagacaca 4776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 6 - 158
Target Start/End: Original strand, 17704 - 17856
Alignment:
Q  6 acctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaaca 105  Q
    ||||||||||| | ||||| ||||||||| | ||| ||||||||   ||||||||| || ||||||||||| ||||||| ||||||||||||||||| ||    
T  17704 acctccaacctcccacctatttcgccataacgggcgactaaaacatgataccacaatccttctctatccactaacatccaccaacaccatttccctagca 17803  T
Q  106 aagcactattaaactccctcagctgtctcactcccaaccctccatactccttt 158  Q
    | |||  |||||||||| ||| ||  || || |||||||||||| ||||||||    
T  17804 atgcaacattaaactccttcaacttcctgacccccaaccctccaaactccttt 17856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 17261 - 17331
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttg--gagagagatagacacaaaaaa 509  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||    
T  17261 gggtcaagatcctctccatttataaatttcttcatttgttgcaatttggagagagagatagacacaaaaaa 17331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 17454 - 17387
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    ||||||| ||||||||||||||||||||| |||||||||| | |||| |||||| | ||||||| ||||    
T  17454 gggtcaatatcctctccatttataaatttcttcatttgtt-ccatttagagagataaagacacataaaa 17387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 3030 - 3098
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  3030 gggttaagaccctctccatttataaattttttcatttgttgtaatttggagagagatagatacaaaaaa 3098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 3050 - 3118
Alignment:
Q  441 gggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagacacaaaaaa 509  Q
    |||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  3050 gggttaagaccctctccatttataaattttttcatttgttgtaatttggagagagatagatacaaaaaa 3118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 56 - 298
Target Start/End: Original strand, 3861 - 4103
Alignment:
Q  56 ccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccctcagctgtc-tcactcccaaccctccatactc 154  Q
    ||||||| |||| || ||||  |||| ||||||||||||||| || ||||||||| | |||||||||||||  | || | ||  ||||||||||||||||    
T  3861 ccacaaagcatccctctccaataacaaccgccaacaccatttacccaacaaagcaatgttaaactccctcaa-tctcgtaacctccaaccctccatactc 3959  T
Q  155 ctttcgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagag 254  Q
    ||| || ||||  | ||  | |||    ||||| || ||||| || || ||||||| ||||||||       ||||||||| | ||||||||||  ||||    
T  3960 cttccgcaaactcagagtatcccacctaacccaagatatttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagag 4059  T
Q  255 attatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  4060 attatacctgacggagctttgaaaaaggaaagtgcatagacagg 4103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 50; Significance: 2e-19; HSPs: 4)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 8338 - 8415
Alignment:
Q  253 agattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 330  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||  ||||||| ||||||||| | ||||||||    
T  8338 agattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcaggacagactttaaaagaacca 8415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 13272 - 13349
Alignment:
Q  253 agattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 330  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||  ||||| | |||| |||| | ||||||||    
T  13272 agattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtaaggacaaactttaaaagaacca 13349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 8086 - 8240
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| | ||||| |||| |||| | ||| ||||| || | |||||| ||||||   ||||| || | ||||| ||||||||| ||  |    
T  8086 ccccaacctccaacctcccacctacttcgtcataacgggcgactaagactcgataccaaaaaccactcctatctactatcatcctccaacaccacttttc 8185  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcc 155  Q
    |||||||||   ||| ||||| |||| ||||||||| ||||| || ||| |||||    
T  8186 taacaaagccaaattgaactctctcaactgtctcacccccaaaccaccaaactcc 8240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 13020 - 13174
Alignment:
Q  1 ccccaacctccaacctgcgacctaattcgccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccc 100  Q
    |||||||||||||||| | ||||| |||| |||| | ||| ||||| || | |||||| ||||||   ||||| || | ||||| ||||||||| ||  |    
T  13020 ccccaacctccaacctcccacctacttcgtcataacgggcgactaagactcgataccaaaaaccactcctatctactatcatcctccaacaccacttttc 13119  T
Q  101 taacaaagcactattaaactccctcagctgtctcactcccaaccctccatactcc 155  Q
    |||||||||   ||| ||||| |||| ||||||||| ||||| || ||| |||||    
T  13120 taacaaagccaaattgaactctctcaactgtctcacccccaaaccaccaaactcc 13174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 440 - 502
Target Start/End: Complemental strand, 25751 - 25689
Alignment:
Q  440 agggtcaagatcctctccatttataaattttttcatttgttgcaatttggagagagatagaca 502  Q
    ||||| |||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  25751 agggtaaagatcctctacatttataactttttccatttgttgcaatttggagagagatagaca 25689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 239 - 386
Target Start/End: Original strand, 67872 - 68019
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 338  Q
    ||||||||||  ||||||||||||| || ||||||||||||||||||   |||||||| ||||||| ||||||||  | ||  |||||  | | ||||||    
T  67872 agattcaatggaagagattataccttacagagctttgaagaaggaaaaatcatagacatgcaatgatgtcaagacgtattttcgaagagtctagcgaccc 67971  T
Q  339 tcaaaagagagaaagcgactttgccaccctgataatctagactttata 386  Q
     ||||||| ||||| ||||||| |||| | || | |||||||||||||    
T  67972 ccaaaagaaagaaaacgacttttccacgccgacagtctagactttata 68019  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 182919 - 182977
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 309  Q
    ||||||||||||| | |||||||||||||||||||| |||||||||||||  |||||||    
T  182919 agagattatacctaatggagctttgaagaaggaaagtgcatagacaggcagagaggtca 182977  T

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Target: scaffold0061 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 232 - 333
Target Start/End: Original strand, 55450 - 55551
Alignment:
Q  232 taaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaa 331  Q
    |||||||||| |||| |  ||| ||||||||| | | ||| |||||||||||||| ||||||||||| |  |||||||||| |||||| |||||||| ||    
T  55450 taaaaatagagtcaagggaagaaattatacctaatgaagccttgaagaaggaaagagcatagacaggtagagaggtcaagatagactttagaagaactaa 55549  T
Q  332 cc 333  Q
    ||    
T  55550 cc 55551  T

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Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 232 - 333
Target Start/End: Complemental strand, 143183 - 143082
Alignment:
Q  232 taaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaa 331  Q
    |||||||||| |||| |  ||| ||||||||| | | ||| |||||||||||||| ||||||||||| |  |||||||||| |||||| |||||||| ||    
T  143183 taaaaatagagtcaagggaagaaattatacctaatgaagccttgaagaaggaaagagcatagacaggtagagaggtcaagatagactttagaagaactaa 143084  T
Q  332 cc 333  Q
    ||    
T  143083 cc 143082  T

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Target: scaffold0112 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 15009 - 14950
Alignment:
Q  239 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 298  Q
    ||||||||||  ||||||||||||||  ||| |||||||||||||||| |||||||||||    
T  15009 agattcaatggaagagattatacctggtggatctttgaagaaggaaagagcatagacagg 14950  T

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Target: scaffold0094 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 26105 - 26153
Alignment:
Q  252 gagattatacctgacggagctttgaagaaggaaagggcatagacaggca 300  Q
    ||||| |||||||||||||| |||||||| ||||||||||| |||||||    
T  26105 gagatgatacctgacggagccttgaagaaagaaagggcataaacaggca 26153  T

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Target: scaffold1809 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 294
Target Start/End: Complemental strand, 1136 - 1093
Alignment:
Q  251 agagattatacctgacggagctttgaagaaggaaagggcataga 294  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||    
T  1136 agagattatacctgatggagccttgaagaaggaaagtgcataga 1093  T

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Target: scaffold0233 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 11066 - 11011
Alignment:
Q  69 ctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccct 124  Q
    ||||||||||||| |||||||||||| |||||||| |||||| |||| ||| ||||    
T  11066 ctatccaccaacaaccgccaacaccacttccctaataaagcaatattgaacaccct 11011  T

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Target: scaffold0113 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 36108 - 36160
Alignment:
Q  51 ctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaa 103  Q
    |||||||||||||||| |||||| || | ||||| |||||||||||| |||||    
T  36108 ctataccacaaaccatttctatctactatcatcctccaacaccattttcctaa 36160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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