View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7100_low_4 (Length: 534)

Name: NF7100_low_4
Description: NF7100
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7100_low_4
NF7100_low_4
[»] chr7 (9 HSPs)
chr7 (21-294)||(42513063-42513346)
chr7 (21-199)||(41712265-41712441)
chr7 (96-287)||(38572287-38572488)
chr7 (21-195)||(49017102-49017276)
chr7 (21-170)||(30456307-30456455)
chr7 (21-144)||(6102928-6103052)
chr7 (30-142)||(11206499-11206611)
chr7 (21-170)||(30452702-30452846)
chr7 (21-71)||(4257366-4257416)
[»] chr5 (6 HSPs)
chr5 (21-294)||(8123394-8123677)
chr5 (29-294)||(671328-671603)
chr5 (21-170)||(24108697-24108847)
chr5 (21-147)||(41709523-41709649)
chr5 (21-115)||(10321870-10321963)
chr5 (213-294)||(41709389-41709470)
[»] chr3 (14 HSPs)
chr3 (21-287)||(36326375-36326639)
chr3 (83-294)||(30911921-30912142)
chr3 (68-294)||(55211736-55211968)
chr3 (16-116)||(14029381-14029481)
chr3 (94-220)||(32414686-32414816)
chr3 (211-294)||(14029173-14029256)
chr3 (80-154)||(33328220-33328294)
chr3 (21-61)||(19798052-19798092)
chr3 (21-61)||(19798297-19798337)
chr3 (21-57)||(1830902-1830938)
chr3 (21-61)||(18319509-18319549)
chr3 (237-296)||(32414500-32414559)
chr3 (21-51)||(30911614-30911644)
chr3 (21-57)||(30912148-30912184)
[»] chr1 (10 HSPs)
chr1 (21-294)||(18583887-18584170)
chr1 (21-170)||(23405476-23405625)
chr1 (176-294)||(13087573-13087700)
chr1 (22-147)||(13087701-13087825)
chr1 (21-114)||(21075942-21076035)
chr1 (219-283)||(21076184-21076248)
chr1 (21-114)||(16544437-16544528)
chr1 (69-146)||(9893767-9893844)
chr1 (124-169)||(24618436-24618481)
chr1 (21-94)||(25541116-25541184)
[»] chr6 (9 HSPs)
chr6 (21-283)||(33242726-33242997)
chr6 (322-522)||(30513155-30513355)
chr6 (21-288)||(4834589-4834868)
chr6 (21-283)||(7415516-7415788)
chr6 (21-283)||(7422524-7422796)
chr6 (21-283)||(7426463-7426735)
chr6 (21-128)||(13886583-13886690)
chr6 (213-294)||(13886454-13886535)
chr6 (21-53)||(16389218-16389250)
[»] chr2 (8 HSPs)
chr2 (36-170)||(45327420-45327554)
chr2 (21-125)||(31211858-31211962)
chr2 (29-101)||(31193246-31193318)
chr2 (128-251)||(31211598-31211731)
chr2 (21-69)||(40400910-40400958)
chr2 (211-294)||(4472702-4472785)
chr2 (48-169)||(28860754-28860873)
chr2 (119-170)||(40400997-40401048)
[»] chr4 (11 HSPs)
chr4 (21-154)||(36050680-36050812)
chr4 (21-154)||(36053939-36054071)
chr4 (21-170)||(27387620-27387769)
chr4 (21-152)||(55322335-55322467)
chr4 (22-170)||(12638012-12638158)
chr4 (21-160)||(24733626-24733765)
chr4 (130-260)||(20441029-20441168)
chr4 (213-294)||(36050519-36050600)
chr4 (213-294)||(36053778-36053859)
chr4 (21-53)||(10129633-10129665)
chr4 (103-170)||(45736016-45736084)
[»] chr8 (10 HSPs)
chr8 (21-154)||(44761983-44762116)
chr8 (21-154)||(44765290-44765423)
chr8 (22-116)||(11825056-11825148)
chr8 (22-100)||(23090074-23090152)
chr8 (22-83)||(1495750-1495811)
chr8 (213-294)||(44765129-44765210)
chr8 (239-294)||(24249050-24249105)
chr8 (213-295)||(44761822-44761904)
chr8 (79-143)||(14276620-14276685)
chr8 (21-53)||(32519624-32519656)


Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 21 - 294
Target Start/End: Original strand, 42513063 - 42513346
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcattatacttttcattgattctcat 119  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||| || |||||| |||||||||||| |||||||||||||||||    
T  42513063 gatacgacccaattcgagtagggatcacactccagaaatta-gagggagaaactagagaaaagagaaagaaaattcattatatttttcattgattctcat 42513161  T
Q  120 aataaggcatacaatgcttatatagacttgtgcatgctcataataagataagtgtaccctaacatactcaatatcatcccctaacaataga--------- 210  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||             
T  42513162 aataaagcatacaatgcttatatagacttgtgcatactcataataagataagtgtaccctaacatactcaatattatcccctaacaatagaccttctaga 42513261  T
Q  211 -ccttctagattaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaaatatcatatca 294  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42513262 tccttctagattaaggtgagtcataataacttctagaactagatgagtcaccacattagtgctccttattctaaatatcctatca 42513346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 41712441 - 41712265
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagagaaaactagagataaaagaaaggaaattcattatacttttcattgattctcata 120  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||  |||||||| |||||||||    
T  41712441 gatacgacccaattcgagtaaggatcacactccaaaaattaagagagaaaactagagacaaaagaaaggaaatttgttat--ttttcattcattctcata 41712344  T
Q  121 ataaggcatacaatgcttatatagacttgtgcatgctcataataagataagtgtaccctaacatactcaatatcatccc 199  Q
    ||||| |||||||| ||||||||||||||||| | |||||||||| ||||||| ||||||||||||| ||||| |||||    
T  41712343 ataagacatacaatacttatatagacttgtgcctactcataataaaataagtgcaccctaacatacttaatattatccc 41712265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 96 - 287
Target Start/End: Original strand, 38572287 - 38572488
Alignment:
Q  96 attatacttttcattgattctcataataaggcatacaatgcttatatagacttgtgcatgctcataataagataagtgtaccctaacatactcaatatca 195  Q
    |||||| |||| ||| |||||||||||||||||||||||| ||||||||||||| ||||  |||||||||||||||||||||||||| |||||||||| |    
T  38572287 attatattttttattaattctcataataaggcatacaatgtttatatagacttgggcatattcataataagataagtgtaccctaacttactcaatatta 38572386  T
Q  196 tcccctaacaatagaccttc----------tagattaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaaat 285  Q
    ||||||||||| | ||||||          ||||||||||||| |||||||||||||||||||||| ||||||| ||||||||| ||| |||||||||||    
T  38572387 tcccctaacaagataccttctagatccttttagattaaggtgagtcataataacttctagaactagctgagtcagcacattagtactcattattctaaat 38572486  T
Q  286 at 287  Q
    ||    
T  38572487 at 38572488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 21 - 195
Target Start/End: Complemental strand, 49017276 - 49017102
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcattatacttttcattgattctcat 119  Q
    ||||||||| ||||||| |||||||||||||||| |||||| |||||| |||||||||||||||||||| ||||  |||||| |||||||| | ||||||    
T  49017276 gatacgacctaattcgaatagggatcacactccataaatta-gagagagaaactagagataaaagaaagaaaatatattatatttttcattaagtctcat 49017178  T
Q  120 aataaggcatacaatgcttatatagacttgtgcatgctcataataagataagtgtaccctaacatactcaatatca 195  Q
    |||||||||||||||||||||| | ||||||| ||  ||||||||||||||||| | | |||||||||||||||||    
T  49017177 aataaggcatacaatgcttatacaaacttgtggatagtcataataagataagtgcatcataacatactcaatatca 49017102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 30456455 - 30456307
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcattatacttttcattgattctcat 119  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||| || |||||||||| || |||||| |||||||||||| ||||||||  |||| ||    
T  30456455 gatacgacccaattcgagtagggatcacactccagaattta-gagggagaaactagagaaaagagaaagaaaattcattatatttttcattcgttctaat 30456357  T
Q  120 aataaggcatacaatgcttatatagacttgtgcatgctcataataagataa 170  Q
     |||||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  30456356 cataaggcatataatgcttatatagactt-tgcatactcataataagataa 30456307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 6103052 - 6102928
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagagaaaactagagataaaag-aaaggaaattcattatacttttcattgattctcat 119  Q
    ||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||  |||||||||||| |||||||||||||| ||    
T  6103052 gatacaacccaattcgagtaggaatcacactccataaattaagagagaaaactagagataaaagcaaaaaaaattcattatatttttcattgattctaat 6102953  T
Q  120 aataaggcatacaatgcttatatag 144  Q
     || |   |||||||||||||||||    
T  6102952 catgaaagatacaatgcttatatag 6102928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 30 - 142
Target Start/End: Complemental strand, 11206611 - 11206499
Alignment:
Q  30 caattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcattatacttttcattgattctcataataaggca 128  Q
    |||||||||||| ||||||||||||||| ||| ||| || |||||||||| || |||||| |||||||||||| ||||||||||||||||||||||||||    
T  11206611 caattcgagtagagatcacactccagaattta-gagggagaaactagagaaaagagaaagaaaattcattatatttttcattgattctcataataaggca 11206513  T
Q  129 tacaatgcttatat 142  Q
    ||||||| ||||||    
T  11206512 tacaatgtttatat 11206499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 30452846 - 30452702
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaatta-agagagaaaactagagataaaagaaaggaaattcattatacttttcattgattctcat 119  Q
    ||||||||||||||||||||||||||||||||||||| ||| || ||| |||||||||| || |||||| |||||||||||| ||||||||  |||| ||    
T  30452846 gatacgacccaattcgagtagggatcacactccagaatttagagggag-aaactagagaaaagagaaagaaaattcattatatttttcattcgttctaat 30452748  T
Q  120 aataaggcatacaatgcttatatagacttgtgcatgctcataataagataa 170  Q
     |||||||||||||    ||||||||||| ||||| |||||||||||||||    
T  30452747 cataaggcatacaa----tatatagactt-tgcatactcataataagataa 30452702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 4257366 - 4257416
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagagaaaa 71  Q
    |||||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  4257366 gatacgacccaatatgagtagggatcacactccagaaattaagagataaaa 4257416  T

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Target: chr5 (Bit Score: 170; Significance: 5e-91; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 21 - 294
Target Start/End: Complemental strand, 8123677 - 8123394
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcattatacttttcattgattctcat 119  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||| || ||| || ||| || |||||| |||||||||||| |||||||||||||||||    
T  8123677 gatacgacccaattcgagtatggatcacacttcagaaatta-gagggagaaattaaagaaaagagaaagaaaattcattatatttttcattgattctcat 8123579  T
Q  120 aataaggcatacaatgcttatatagacttgtgcatgctcataataagataagtgtaccctaacatactcaatatcatcccctaacaataga--------- 210  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||             
T  8123578 aataaagcatacaatgcttatatagacttgtgcatactcataataagataagtgtaccctaacatactcaatattatcccctaacaatagatcttctaga 8123479  T
Q  211 -ccttctagattaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaaatatcatatca 294  Q
     |||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  8123478 tccttctagattaaggtcagtcataataacttctagaactagatgagtcaccagattagtgctccttattctaaatatcctatca 8123394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 29 - 294
Target Start/End: Complemental strand, 671603 - 671328
Alignment:
Q  29 ccaattcgagtagggatcacactccagaaattaagagagaaaactagagataaaagaaaggaaattcattatacttttcattgattctcataataaggca 128  Q
    ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  671603 ccaattcgagttgggatcacacttcagaaattaagagagaaagctagagataaaagaaagaaaattcattatatttttcattaattctcataataaggca 671504  T
Q  129 tacaatgcttatatagacttgtgcatgctcataataagataagtgtaccctaacatactcaatatcatcccctaacaataga----------ccttctag 218  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||| |          ||||||||    
T  671503 tacaatgattatataaacttgtgcatactcataataagataagtgtaccctaacctactcaatattatcccctaacaatatatcttatggatccttctag 671404  T
Q  219 attaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaaatatcatatca 294  Q
    |||||||||| |||||||||| ||||||| |||  ||||||| | |||| |||||||||||||||||||| |||||    
T  671403 attaaggtgagtcataataacatctagaattagccgagtcactatattaatgctccttattctaaatatcctatca 671328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 24108847 - 24108697
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagagaaaactagagataaaagaaaggaaattcattatacttttcattgattctcata 120  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||  ||||||||||||||||| ||||||||| |||| ||     
T  24108847 gatacgacccaattcgagtagggatcacactccagaaattaaggaagaaaactagagacaaacaaaaggaaattcattatatttttcattggttctaatc 24108748  T
Q  121 ataaggcatacaatgcttatatagacttg-tgcatgctcataataagataa 170  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||| ||||    
T  24108747 ataagacatacaatgcttatatagacttgttgcatactcataataaaataa 24108697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 41709649 - 41709523
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcattatacttttcattgattctcat 119  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||| || |||||| ||| || |||||| |||||||||||| |||||||||||||||||    
T  41709649 gatacgacccaattcgagtagagatcacactccagaattta-gagggagaaactatagaaaagagaaagaaaattcattatatttttcattgattctcat 41709551  T
Q  120 aataaggcatacaatgcttatatagact 147  Q
    |||||||||||||||| |||||||||||    
T  41709550 aataaggcatacaatgtttatatagact 41709523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 10321870 - 10321963
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcattatacttttcattgattc 115  Q
    |||||||||||||| |||||||||||||||||||  |||| ||||||| || |||||||||| ||||||||||||||||||  |||||||||||||    
T  10321870 gatacgacccaatttgagtagggatcacactcca-taatttagagagataagctagagataagagaaaggaaattcattat-tttttcattgattc 10321963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 41709470 - 41709389
Alignment:
Q  213 ttctagattaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaaatatcatatca 294  Q
    |||||||||||| ||| ||||| || |||||||||||||| |||||||||||||  |  ||||||||||| ||||| |||||    
T  41709470 ttctagattaagatgagtcatactaccttctagaactagaggagtcaccacatttatattccttattctagatatcctatca 41709389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 169; Significance: 2e-90; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 21 - 287
Target Start/End: Complemental strand, 36326639 - 36326375
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcattatacttttcattgattctcat 119  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||| || |||||||||| || |||||| |||||||||||| |||||||||||||||||    
T  36326639 gatacgacccaattcgagtagggatcacactccagaattta-gagggagaaactagagaaaagagaaagaaaattcattatatttttcattgattctcat 36326541  T
Q  120 aataaggcatacaatgcttatatagacttgtgcatgctcataataagataagtgtaccctaacatactcaatatcatcccctaacaatagaccttctaga 219  Q
    ||||| ||||||||||||||||||||||||  ||| ||||||||||  |||||| |||||||||||||||||||||||||||||||| | ||||||||||    
T  36326540 aataaagcatacaatgcttatatagacttg--catactcataataacctaagtgcaccctaacatactcaatatcatcccctaacaagataccttctaga 36326443  T
Q  220 ttaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaaatat 287  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||    
T  36326442 ttaatgtgagtcataataacttctagaactagatgagtcaccacattaatactcattattctaaatat 36326375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 83 - 294
Target Start/End: Complemental strand, 30912142 - 30911921
Alignment:
Q  83 agaaaggaaattcattatacttttcattgattctcataataaggcatacaatgcttatatagacttgtgcatgctcataataagataagtgtaccctaac 182  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||| ||||||| ||||||||    
T  30912142 agaaagaaaattcattatatttttcattgattctcataataaggcatacaatacttatatagacttgtgcatactcacaataaaataagtgcaccctaac 30912043  T
Q  183 atactcaatatcatcccctaacaa---------taga-ccttctagattaaggtgactcataataacttctagaactagatgagtcaccacattagtgct 272  Q
    ||||||||||| ||||||||||||         |||| |||||||||||||||||| |||||||||||||||||||||   |||||| ||||||||| ||    
T  30912042 atactcaatattatcccctaacaagatatattttagatccttctagattaaggtgagtcataataacttctagaactaaccgagtcatcacattagtact 30911943  T
Q  273 ccttattctaaatatcatatca 294  Q
    | ||||||||| |||| |||||    
T  30911942 cattattctaagtatcctatca 30911921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 68 - 294
Target Start/End: Original strand, 55211736 - 55211968
Alignment:
Q  68 aaaactagagataaaaga-aaggaaattcattatacttttcattgattctcataataaggcatacaatgcttatatagacttgtgcatgctcataataag 166  Q
    |||||||||||||| ||| ||  |||||||||||| |||||||||||||||||||||||||||||||     ||||||||||||||||  ||||||||||    
T  55211736 aaaactagagataagagagaaataaattcattatatttttcattgattctcataataaggcatacaa-----atatagacttgtgcatattcataataag 55211830  T
Q  167 ataagtgtaccctaacatactcaatatcatcccctaacaataga----------ccttctagattaaggtgactcataataacttctagaactagatgag 256  Q
    ||||||| ||||||||||||||||||| |||||||| ||||| |          |||| ||||||||| ||| || | ||||||| |||||||||  |||    
T  55211831 ataagtgcaccctaacatactcaatattatcccctaccaatataccttatggatccttttagattaagatgagtcgtgataacttttagaactagccgag 55211930  T
Q  257 tcaccacattagtgctccttattctaaatatcatatca 294  Q
    || ||||||||||||||||||||||||||||| |||||    
T  55211931 tcgccacattagtgctccttattctaaatatcctatca 55211968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 14029481 - 14029381
Alignment:
Q  16 catcagatacgacccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcattatacttttcattgatt 114  Q
    |||| |||||| |||||||||||||||||||||||||||||| ||| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||    
T  14029481 catctgatacggcccaattcgagtagggatcacactccagaattta-gagtgagaaactagagataaaagaaaggaaattcattatatttttcattgatt 14029383  T
Q  115 ct 116  Q
    ||    
T  14029382 ct 14029381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 32414816 - 32414686
Alignment:
Q  94 tcattatacttttcattgattctcataataaggcatacaatgcttatatagacttgt----gcatgctcataataagataagtgtaccctaacatactca 189  Q
    |||||||| |||| |||||||||| ||||||||||||||||| ||||||||||||||    |||  |||| ||||||||||||| ||| ||||||||| |    
T  32414816 tcattatattttttattgattctcgtaataaggcatacaatgtttatatagacttgtttgtgcaaactcaaaataagataagtgcaccataacatactta 32414717  T
Q  190 atatcatcccctaacaatagaccttctagat 220  Q
    |||| ||||||  |||||| |||||||||||    
T  32414716 atattatccccagacaatataccttctagat 32414686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 211 - 294
Target Start/End: Complemental strand, 14029256 - 14029173
Alignment:
Q  211 ccttctagattaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaaatatcatatca 294  Q
    |||||||||||||| ||| ||||  || |||||||||||||  |||||||| |||| ||||| ||||||||||||||| |||||    
T  14029256 ccttctagattaagatgattcattctaccttctagaactagccgagtcaccgcatttgtgcttcttattctaaatatcttatca 14029173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 33328294 - 33328220
Alignment:
Q  80 aaaagaaaggaaattcattatacttttcattgattctcataataaggcatacaatgcttatatagacttgtgcat 154  Q
    ||||||||||||||| ||||||  |||||||| |||| || |||| |||||||||||||||| |||||| |||||    
T  33328294 aaaagaaaggaaattgattatatctttcattggttctaattataaagcatacaatgcttatacagacttatgcat 33328220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 19798052 - 19798092
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaatta 61  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  19798052 gatacgacccgattcgagtagggatcacactccagaaatta 19798092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 19798297 - 19798337
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaatta 61  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  19798297 gatacgacccaattcgagtagggatcagactccagaaatta 19798337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 1830938 - 1830902
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaa 57  Q
    ||||||||||||||| |||||||||||||||||||||    
T  1830938 gatacgacccaattcaagtagggatcacactccagaa 1830902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 18319549 - 18319509
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaatta 61  Q
    |||||||||| ||||||||||||||||||||| ||||||||    
T  18319549 gatacgacccgattcgagtagggatcacactctagaaatta 18319509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 296
Target Start/End: Complemental strand, 32414559 - 32414500
Alignment:
Q  237 aacttctagaactagatgagtcaccacattagtgctccttattctaaatatcatatcaca 296  Q
    |||||||| | |||| ||||||||||||||| || |||||||||||| |||| |||||||    
T  32414559 aacttctaaatctagctgagtcaccacattaatgttccttattctaactatcctatcaca 32414500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 30911614 - 30911644
Alignment:
Q  21 gatacgacccaattcgagtagggatcacact 51  Q
    |||||||||||||||||||||||||||||||    
T  30911614 gatacgacccaattcgagtagggatcacact 30911644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 30912184 - 30912148
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaa 57  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  30912184 gatacgactcaattcgagtacggatcacactccagaa 30912148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 165; Significance: 5e-88; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 21 - 294
Target Start/End: Original strand, 18583887 - 18584170
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagagaaaactagagataaaagaaaggaaattcattatacttttcattgattctcata 120  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  18583887 gatacgacccaattcgagtagagattacactccagaaattaagagagaaaactagagataaaagaaaggaaattcagtatatttttcattgattctcata 18583986  T
Q  121 ataaggcatacaatgcttatatagacttgtgcatgctcataataagataagtgtaccctaacatactcaatatcatcccctaacaataga---------- 210  Q
    |||| ||||||||||||||||||||||||||||| || |||||| ||||| || ||||||||||||||||||| ||||||||| |||| |              
T  18583987 ataaagcatacaatgcttatatagacttgtgcatacttataatacgataactgcaccctaacatactcaatattatcccctaataatataccttttagat 18584086  T
Q  211 ccttctagattaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaaatatcatatca 294  Q
    |||||||||||||||||| |||||||||||| || |||||| | || |||||||||| |||||||||||||||||||| |||||    
T  18584087 ccttctagattaaggtgagtcataataacttttataactagctaagccaccacattaatgctccttattctaaatatcctatca 18584170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 23405476 - 23405625
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcattatacttttcattgattctcat 119  Q
    ||||||||||||||| ||||||||||||||||||||| ||| ||| || |||||||||| || |||||| |||||||||||| |||||||||||||||||    
T  23405476 gatacgacccaattcaagtagggatcacactccagaattta-gagggagaaactagagaaaagagaaagaaaattcattatatttttcattgattctcat 23405574  T
Q  120 aataaggcatacaatgcttatatagacttgtgcatgctcataataagataa 170  Q
    |||||||||||||||| ||| |||||||||||||| | |||| ||||||||    
T  23405575 aataaggcatacaatgtttagatagacttgtgcatacacatagtaagataa 23405625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 294
Target Start/End: Complemental strand, 13087700 - 13087573
Alignment:
Q  176 ccctaacatactcaatatcatcccctaacaatagaccttctagat---------taaggtgactcataataacttctagaactagatgagtcaccacatt 266  Q
    ||||||||||||| |||| |||||||||||||| |||||||||||         |||||||| ||||||||||||||||||||||  |||||||||||||    
T  13087700 ccctaacatactcgatattatcccctaacaatataccttctagatcgtctagattaaggtgagtcataataacttctagaactagccgagtcaccacatt 13087601  T
Q  267 agtgctccttattctaaatatcatatca 294  Q
    | ||||||||||||| |||||| |||||    
T  13087600 aatgctccttattctgaatatcctatca 13087573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 13087825 - 13087701
Alignment:
Q  22 atacgacccaattcgagtagggatcacactccagaaattaagagagaaaactagagataaaagaaaggaaattcattatactttt-cattgattctcata 120  Q
    |||||||||||||||| |||| |||||||||||||| ||  ||||||    || ||||||||||||  ||||||||| || |||| |||| |||||||||    
T  13087825 atacgacccaattcgaataggtatcacactccagaatttc-gagagaggt-taaagataaaagaaaataaattcattgtattttttcattcattctcata 13087728  T
Q  121 ataaggcatacaatgcttatatagact 147  Q
    |||||||||||||| ||||||||||||    
T  13087727 ataaggcatacaatacttatatagact 13087701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 21075942 - 21076035
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaa-gagagaaaactagagataaaagaaaggaaattcattatacttttcattgatt 114  Q
    ||||||| | ||||||||||||||| ||||||||||| |||  |||||||| ||| ||||||||||||||||||||| |||| ||||||||||||    
T  21075942 gatacgatcaaattcgagtagggatgacactccagaatttagcgagagaaa-ctacagataaaagaaaggaaattcactatatttttcattgatt 21076035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 21076184 - 21076248
Alignment:
Q  219 attaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaa 283  Q
    |||||||||| ||||| |  ||||||||||||| ||||||||||||||||| |||||||||||||    
T  21076184 attaaggtgaatcatatttgcttctagaactaggtgagtcaccacattagtactccttattctaa 21076248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 16544528 - 16544437
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagagaaaactagagataaaagaaaggaaattcattatacttttcattgatt 114  Q
    |||||| || |||| || ||| ||||||||| ||||||||||   ||||||||| |||||||||||||||||||| ||||  ||||||||||||    
T  16544528 gatacggcctaatttgaatagcgatcacacttcagaaattaaagaagaaaactaaagataaaagaaaggaaattcgttat--ttttcattgatt 16544437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 9893844 - 9893767
Alignment:
Q  69 aaactagagataaaagaaaggaaattcattatacttttcattgattctcataataagg-catacaatgcttatatagac 146  Q
    ||||||||||| |||||||| |||||||||||| |||||||||| || ||| || ||| |||| |||||||||||||||    
T  9893844 aaactagagatgaaagaaagaaaattcattatatttttcattga-tcccattatgaggtcataaaatgcttatatagac 9893767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 24618436 - 24618481
Alignment:
Q  124 aggcatacaatgcttatatagacttgtgcatgctcataataagata 169  Q
    ||||||||||| ||||||||||||| | ||| ||||||||||||||    
T  24618436 aggcatacaattcttatatagacttatacatactcataataagata 24618481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 25541116 - 25541184
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagagaaaactagagataaaagaaaggaaatt 94  Q
    |||||||| |||||  |||||||||||||||| ||     ||||||||||||||||||||||| |||| |||||    
T  25541116 gatacgacacaatttaagtagggatcacactctag-----aagagagaaaactagagataaaaaaaagaaaatt 25541184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 155; Significance: 5e-82; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 21 - 283
Target Start/End: Complemental strand, 33242997 - 33242726
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcattatacttttcattgattctcat 119  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||| |||||||||| ||||||||||||| |||||||||||||||||    
T  33242997 gatacgacccaattcgagtagagatcacactccagaaatta-gagagagaaactagaaataaaagaaaagaaattcattatatttttcattgattctcat 33242899  T
Q  120 aataaggcatacaatgcttatatagacttgtgcatgctcataataagataagtgtaccctaacatactcaatatcatcccctaacaat----------ag 209  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||| |||||||||||||          |     
T  33242898 aataaggcatacaatgcttatatagacttgtgcatactcataataagataagtgca-cctaacatactcaatattatcccctaacaatatgtcttctaaa 33242800  T
Q  210 accttctagattaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaa 283  Q
     |||| |||| |||| |||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  33242799 tccttatagactaagatgactcataacaacttctagaactagctgagtcaccatattagtgctccttattctaa 33242726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 322 - 522
Target Start/End: Complemental strand, 30513355 - 30513155
Alignment:
Q  322 tgattgacactggttgaaggatggatagatgacaaaatctggaaaaa-tgttgaatgagaattatcttatggtccacataacaatttacaaacatgtctt 420  Q
    |||||||||||||||||||||  |||||||| |||||||| |||||| |||||||||||| |||||||||||||||| |||||||||||||| |||| ||    
T  30513355 tgattgacactggttgaaggaatgatagatggcaaaatctagaaaaaatgttgaatgagagttatcttatggtccacgtaacaatttacaaaaatgtatt 30513256  T
Q  421 tttaaggaaatagttgagtttcatggactaaattttcaaccaagtttttcaactgttttcactgtcatgttgtcttcgtgattatggttacatcgcgatt 520  Q
    || |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||| |||||| ||||||||||    
T  30513255 ttcaaggaaatagttgagtttcatggactaaattttcaa-caagtttttcaactgttgttactgtcatgttgtcttcgtgatcatggttgcatcgcgatt 30513157  T
Q  521 tt 522  Q
    ||    
T  30513156 tt 30513155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 21 - 288
Target Start/End: Complemental strand, 4834868 - 4834589
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcattatacttttcattgattctcat 119  Q
    |||||||||||||| |||||||||||||||||||||| ||| ||| || |||||||||| || |||||| |||||||||||| |||||||||||||| ||    
T  4834868 gatacgacccaatttgagtagggatcacactccagaattta-gagggagaaactagagaaaagagaaagaaaattcattatatttttcattgattctaat 4834770  T
Q  120 aataaggcatacaatgcttatatagacttgtgcatgctcataataagataagtgtaccctaacatactcaatatcatcccctaacaa-----------ta 208  Q
    ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||| ||||||||| ||           ||    
T  4834769 aatgaggcatacaatgcttatatagacttatgcatactcataataagataagtgcaccctaacatactcaatattatcccctaataagatactcctttta 4834670  T
Q  209 ga-ccttctagattaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaaatatc 288  Q
    || |||||||||||||||||| ||||||||||||||||||||   |||||||||||||| ||  || ||||||||||||||    
T  4834669 gatccttctagattaaggtgagtcataataacttctagaacttactgagtcaccacattcgtagtcattattctaaatatc 4834589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 21 - 283
Target Start/End: Complemental strand, 7415788 - 7415516
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcattatacttttcattgattctcat 119  Q
    ||||||| |||| | |||||||||||||||||||||||||| |||||| |||||||||| || |||||| |||||||||||| |||||||||||||||||    
T  7415788 gatacgatccaacttgagtagggatcacactccagaaatta-gagagagaaactagagaaaagagaaagaaaattcattatatttttcattgattctcat 7415690  T
Q  120 aataaggcatacaatgcttatatagacttgtgcatgctcataataagataagtgtaccctaacatactcaatatcatcccctaacaa---------taga 210  Q
    ||||||||||||||||||||||||||||| ||  | |||||||||||||||||| ||| ||||||||||||||| ||||||||||||         ||||    
T  7415689 aataaggcatacaatgcttatatagacttatgtgtactcataataagataagtgcaccataacatactcaatattatcccctaacaagataatttctaga 7415590  T
Q  211 -ccttctagattaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaa 283  Q
     ||||||| |||||| ||| ||||||||  |||||||||||| ||||||||||||||||| ||| |||||||||    
T  7415589 tccttctaaattaagatgagtcataatattttctagaactagctgagtcaccacattagtactcattattctaa 7415516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 21 - 283
Target Start/End: Complemental strand, 7422796 - 7422524
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcattatacttttcattgattctcat 119  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||| || |||||| |||||||||||| |||||||||||||||||    
T  7422796 gatacgacccaattcgagtagggatcacactcaagaaatta-gagagagaaactagagaaaagagaaagaaaattcattatatttttcattgattctcat 7422698  T
Q  120 aataaggcatacaatgcttatatagacttgtgcatgctcataataagataagtgtaccctaacatactcaatatcatcccctaacaa---------taga 210  Q
    ||||||||||||||||||||||||||||| ||  | ||| |||||||||||||| ||| ||||||||||||| | ||||||||||||         ||||    
T  7422697 aataaggcatacaatgcttatatagacttatgtgtactcttaataagataagtgcaccataacatactcaatgttatcccctaacaagataacttctaga 7422598  T
Q  211 -ccttctagattaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaa 283  Q
     ||||||| |||||| ||| ||||||||  |||||||||||| | ||||||||||||||| ||| |||||||||    
T  7422597 tccttctaaattaagatgattcataatattttctagaactagctaagtcaccacattagtactcattattctaa 7422524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 21 - 283
Target Start/End: Complemental strand, 7426735 - 7426463
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcattatacttttcattgattctcat 119  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||| ||| |||||| || |||||| |||||||||||| |||||||||||||||||    
T  7426735 gatacgacccaattcgagtagggatcacactccagaaatta-gaaagagaaattagagaaaagagaaagaaaattcattatatttttcattgattctcat 7426637  T
Q  120 aataaggcatacaatgcttatatagacttgtgcatgctcataataagataagtgtaccctaacatactcaatatcatcccctaacaa---------taga 210  Q
    |||||||||||||||| |||||||||||| ||  | ||| |||||||||||||| ||| ||||||||||||||| ||||||||||||         ||||    
T  7426636 aataaggcatacaatgtttatatagacttatgtgtactcttaataagataagtgcaccataacatactcaatattatcccctaacaagataacttctaga 7426537  T
Q  211 -ccttctagattaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaa 283  Q
     ||| |||||||||| ||| | ||||||  |||||||||||| ||||||||||||||| | ||| |||||||||    
T  7426536 tcctactagattaagatgagttataatattttctagaactagctgagtcaccacattaatactcattattctaa 7426463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 13886690 - 13886583
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcattatacttttcattgattctcat 119  Q
    |||||||||||||| |||||||||||||||||||||| ||| ||| || |||||||||| || |||||| |||||||||||| |||||||||||||| ||    
T  13886690 gatacgacccaatttgagtagggatcacactccagaattta-gagggagaaactagagaaaagagaaagaaaattcattatatttttcattgattctaat 13886592  T
Q  120 aataaggca 128  Q
    ||| |||||    
T  13886591 aatgaggca 13886583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 13886535 - 13886454
Alignment:
Q  213 ttctagattaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaaatatcatatca 294  Q
    |||||||||||||||| ||||||||| || |||||||||  |||||||||||||||||||||||||||||| |||| |||||    
T  13886535 ttctagattaaggtgagtcataataatttatagaactagcagagtcaccacattagtgctccttattctaactatcctatca 13886454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 16389218 - 16389250
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactcc 53  Q
    |||||||||||||||||||||||||||||||||    
T  16389218 gatacgacccaattcgagtagggatcacactcc 16389250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 3e-46; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 45327420 - 45327554
Alignment:
Q  36 gagtagggatcacactccagaaattaagagagaaaactagagataaaagaaaggaaattcattatacttttcattgattctcataataaggcatacaatg 135  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||| ||||||||  ||||||||||||| |||||||||    
T  45327420 gagtagggatcacactccagaaattaagagagaaaattagagataaaagaaaagaaatttattatatttttcattttttctcataataagacatacaatg 45327519  T
Q  136 cttatatagacttgtgcatgctcataataagataa 170  Q
    ||||||||||||||||||| | |||| ||||||||    
T  45327520 cttatatagacttgtgcatacacatagtaagataa 45327554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 31211962 - 31211858
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagagaaaactagagataaaagaaaggaaattcattatacttttcattgattctcata 120  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  31211962 gatacgatccaattcgagtagggatcacactccagaaattaagagagaaaactagagataaaagaaagaaaattcattatatttttcattgattctcata 31211863  T
Q  121 ataag 125  Q
    |||||    
T  31211862 ataag 31211858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 31193318 - 31193246
Alignment:
Q  29 ccaattcgagtagggatcacactccagaaattaagagagaaaactagagataaaagaaaggaaattcattata 101  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  31193318 ccaattcgagtagggatcacactctagaaattaagagagaaaactagagatgaaagaaagaaaatttattata 31193246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 31211731 - 31211598
Alignment:
Q  128 atacaatgcttatatagacttgtgcatgctcataataagataagtgtaccctaacatactcaatatcatcccctaacaataga----------ccttcta 217  Q
    ||||||| ||||||||||||| ||||| |||||| ||||||||||| || |||||||||||||||| |||||||||||||| |          |||||||    
T  31211731 atacaatacttatatagacttatgcatactcatattaagataagtgcactctaacatactcaatattatcccctaacaatatatcttctaaatccttcta 31211632  T
Q  218 gattaaggtgactcataataacttctagaactag 251  Q
    |||||| |||| |||||| |||||||||||||||    
T  31211631 gattaaagtgagtcataacaacttctagaactag 31211598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 40400910 - 40400958
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagagaa 69  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||||    
T  40400910 gatatgactcaattcgagtagggatcacactccagaaatttagagagaa 40400958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 211 - 294
Target Start/End: Complemental strand, 4472785 - 4472702
Alignment:
Q  211 ccttctagattaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaaatatcatatca 294  Q
    |||||||||||||||||| ||||  |  ||||||||||||| |||||||||| || | ||||||||||| ||| |||| |||||    
T  4472785 ccttctagattaaggtgaatcatctttgcttctagaactaggtgagtcaccatataaatgctccttattttaactatcctatca 4472702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 169
Target Start/End: Complemental strand, 28860873 - 28860754
Alignment:
Q  48 cactccagaaattaagagagaaaactagagataaaagaaaggaaattcattatacttttcattgattctcataataaggcatacaatgcttatatagact 147  Q
    ||||||||||||||||||||||||||||||| | ||||||  |||||  ||||  |||||||||||| | || || |||||| |  ||||| |||||  |    
T  28860873 cactccagaaattaagagagaaaactagagacagaagaaataaaatttgttat--ttttcattgattttaatcatgaggcattcggtgcttttataggtt 28860776  T
Q  148 tgtgcatgctcataataagata 169  Q
    |||| || ||||| ||||||||    
T  28860775 tgtggatcctcattataagata 28860754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 40400997 - 40401048
Alignment:
Q  119 taataaggcatacaatgcttatatagacttgtgcatgctcataataagataa 170  Q
    |||| |||||||| ||||||| |||||||||||||| ||||| |||||||||    
T  40400997 taatgaggcatactatgcttaaatagacttgtgcatactcatgataagataa 40401048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 1e-45; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 36050812 - 36050680
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagagaaaactagagataaaagaaaggaaattcattatacttttcattgattctcata 120  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||    ||||||    
T  36050812 gatacgacccaattcgagtagggatcacactccaaaaattaaaagagaaaactagagataaaagaaaagaaattcattatatttttcatt-tccctcata 36050714  T
Q  121 ataaggcatacaatgcttatatagacttgtgcat 154  Q
    ||||||||||||||| ||||||||||||||||||    
T  36050713 ataaggcatacaatgtttatatagacttgtgcat 36050680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 36054071 - 36053939
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagagaaaactagagataaaagaaaggaaattcattatacttttcattgattctcata 120  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||    ||||||    
T  36054071 gatacgacccaattcgagtagggatcacactccaaaaattaaaagagaaaactagagataaaagaaaagaaattcattatatttttcatt-tccctcata 36053973  T
Q  121 ataaggcatacaatgcttatatagacttgtgcat 154  Q
    ||||||||||||||| ||||||||||||||||||    
T  36053972 ataaggcatacaatgtttatatagacttgtgcat 36053939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 27387769 - 27387620
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcattatacttttcattgattctcat 119  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||| || ||||||||||| || |||| ||||||||||||| ||||||||  | || ||    
T  27387769 gatacgacccaattcgagtagggatcacactccagaattta-gagggagaaactagagatgaaggaaaagaaattcattatatttttcattcctgctaat 27387671  T
Q  120 aataaggcatacaatgcttatatagacttgtgcatgctcataataagataa 170  Q
    ||| ||||||||||||||||||||||||||||||| ||| |||||||||||    
T  27387670 aatgaggcatacaatgcttatatagacttgtgcatcctcgtaataagataa 27387620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 21 - 152
Target Start/End: Original strand, 55322335 - 55322467
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagagaaaactagagataaaagaaaggaaattcatta-tacttttcattgattctcat 119  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||   || |||||||||||||||||||||||||||| || |||||||| || || ||    
T  55322335 gatacgacccaattcgagtagggatcacactccagaatttagaagtagaagctagagataaaagaaaggaaattcattattatttttcattcatcctaat 55322434  T
Q  120 aataaggcatacaatgcttatatagacttgtgc 152  Q
    ||| |||||||||||||||||||||||||||||    
T  55322435 aatgaggcatacaatgcttatatagacttgtgc 55322467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 22 - 170
Target Start/End: Complemental strand, 12638158 - 12638012
Alignment:
Q  22 atacgacccaattcgagtagggatcacactccagaaattaagagagaaaactagagataaaagaaaggaaattcattatacttttcattgattctcataa 121  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||| |||||||||||||||||  ||||  |||||||||||| | || |    
T  12638158 atacgacccaattcgagtaggtatcgcactccagaaattaagagagaaatctagatataaaagaaaggaaatttgttat--ttttcattgattattatca 12638061  T
Q  122 taaggcatacaatgcttatatagacttgtgcatgctcataataagataa 170  Q
    | ||||||||||||||| ||||  |||||| || ||||| |||||||||    
T  12638060 tgaggcatacaatgcttttataagcttgtggatcctcattataagataa 12638012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 21 - 160
Target Start/End: Complemental strand, 24733765 - 24733626
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagagaaaactagagataaaagaaaggaaattcattatacttttcattgattctcata 120  Q
    ||||| ||||||||| |||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||  |||| ||     
T  24733765 gataccacccaattcaagtagggatcacactttagatattaagagagaaaactagatataaaagaaaggaaattcattatatttttcattccttctaatc 24733666  T
Q  121 ataaggcatacaatgcttatatagacttgtgcatgctcat 160  Q
    || |  |||||||||||||||||| | |||| ||||||||    
T  24733665 atgaaacatacaatgcttatataggcatgtggatgctcat 24733626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 130 - 260
Target Start/End: Original strand, 20441029 - 20441168
Alignment:
Q  130 acaatgcttatatagacttgtgcatgctcataataagataagtgtaccctaacatactcaatatcatcccctaacaa---------tagaccttctagat 220  Q
    ||||||||| || |||||||||||| |||||||||||||||||| ||||| |||| |||||||| ||||| ||||||         |||| |||||| ||    
T  20441029 acaatgcttgtacagacttgtgcatactcataataagataagtgcaccctgacatgctcaatattatcccttaacaatatactttttagatcttctaaat 20441128  T
Q  221 taaggtgactcataataacttctagaactagatgagtcac 260  Q
    |||||||| |||||| ||||||||||||||| || |||||    
T  20441129 taaggtgagtcataacaacttctagaactagctgcgtcac 20441168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 36050600 - 36050519
Alignment:
Q  213 ttctagattaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaaatatcatatca 294  Q
    |||||||||||| ||| ||||| || |||||||||||||  |||||||||||||||| ||| |||||||||||||| |||||    
T  36050600 ttctagattaagatgagtcatactaccttctagaactaggggagtcaccacattagtactcattattctaaatatcctatca 36050519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 36053859 - 36053778
Alignment:
Q  213 ttctagattaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaaatatcatatca 294  Q
    |||||||||||| ||| ||||| || |||||||||||||  |||||||||||||||| ||| |||||||||||||| |||||    
T  36053859 ttctagattaagatgagtcatactaccttctagaactaggggagtcaccacattagtactcattattctaaatatcctatca 36053778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 10129633 - 10129665
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactcc 53  Q
    |||||||||||||||||||||||||||||||||    
T  10129633 gatacgacccaattcgagtagggatcacactcc 10129665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 45736084 - 45736016
Alignment:
Q  103 ttttcattgattctcata-ataaggcatacaatgcttatatagacttgtgcatgctcataataagataa 170  Q
    |||||||||||||| ||  || ||||||||||||||||| |||| ||||| ||||||||||||| ||||    
T  45736084 ttttcattgattctaatctatgaggcatacaatgcttatgtagatttgtgaatgctcataataatataa 45736016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 1e-36; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 44762116 - 44761983
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcattatacttttcattgattctcat 119  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||| || |||||| ||| || |||||  |||||||||||| |||||||||||| ||||    
T  44762116 gatacgacccaattcgagtagggatcacactccagaattta-gagggagaaactatagaaaagagaaaaaaaattcattatatttttcattgattttcat 44762018  T
Q  120 aataaggcatacaatgcttatatagacttgtgcat 154  Q
    |||||||||||||||| ||||||||||||||||||    
T  44762017 aataaggcatacaatgtttatatagacttgtgcat 44761983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 44765423 - 44765290
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactccagaaattaagagaga-aaactagagataaaagaaaggaaattcattatacttttcattgattctcat 119  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||| || |||||| ||| || |||||| |||||||||||| |||||||||||| ||||    
T  44765423 gatacgacccaattcgagtagggattacactccagaattta-gagggagaaactatagaaaagagaaagaaaattcattatatttttcattgattttcat 44765325  T
Q  120 aataaggcatacaatgcttatatagacttgtgcat 154  Q
    ||||||| |||||||| ||||||||||||||||||    
T  44765324 aataaggaatacaatgtttatatagacttgtgcat 44765290  T

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Target: chr8; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 11825148 - 11825056
Alignment:
Q  22 atacgacccaattcgagtagggatcacactccagaaattaagagagaaaactagagataaaagaaaggaaattcattatacttttcattgattct 116  Q
    ||||||| |||||||| |||||||||||||||| |||||||||||||||| || ||||||||||||||||||| |||||  |||||||| |||||    
T  11825148 atacgactcaattcgaatagggatcacactccataaattaagagagaaaattaaagataaaagaaaggaaattgattat--ttttcattcattct 11825056  T

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Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 23090152 - 23090074
Alignment:
Q  22 atacgacccaattcgagtagggatcacactccagaaattaagagagaaaactagagataaaagaaaggaaattcattat 100  Q
    |||| |||||||| || |||| ||| ||||||| |||||| |||||||||  ||||||||||||||| ||||| |||||    
T  23090152 atacaacccaatttgaataggaatcgcactccataaattatgagagaaaatcagagataaaagaaagaaaattgattat 23090074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 1495750 - 1495811
Alignment:
Q  22 atacgacccaattcgagtagggatcacactccagaaattaagagagaaaactagagataaaa 83  Q
    |||||||||||||||| |||| ||| |||| || |||||| || ||||||||||||||||||    
T  1495750 atacgacccaattcgaataggaatcgcacttcataaattatgaaagaaaactagagataaaa 1495811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 44765210 - 44765129
Alignment:
Q  213 ttctagattaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaaatatcatatca 294  Q
    |||||||||||| ||| ||||| || |||||||||||||  |||||||||||||  |  ||||||||||| ||||| |||||    
T  44765210 ttctagattaagatgagtcatactaccttctagaactaggggagtcaccacatttatattccttattctagatatcctatca 44765129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 24249105 - 24249050
Alignment:
Q  239 cttctagaactagatgagtcaccacattagtgctccttattctaaatatcatatca 294  Q
    |||||||||||||| || ||||||||| ||||||||||||| | |||||| |||||    
T  24249105 cttctagaactagacgaatcaccacatgagtgctccttattttgaatatcctatca 24249050  T

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Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 295
Target Start/End: Complemental strand, 44761904 - 44761822
Alignment:
Q  213 ttctagattaaggtgactcataataacttctagaactagatgagtcaccacattagtgctccttattctaaatatcatatcac 295  Q
    |||||||||||| ||| ||| | || |||||||||||||  |||||||||||||  |  ||||||||||| ||||| ||||||    
T  44761904 ttctagattaagatgagtcaaactaccttctagaactaggggagtcaccacatttatattccttattctagatatcctatcac 44761822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 14276620 - 14276685
Alignment:
Q  79 taaaagaaaggaaattcattatacttttcattgattctcataataaggca-tacaatgcttatata 143  Q
    |||||||||||||||| |||||| |||||||||||| | || || | ||| |||||||||||||||    
T  14276620 taaaagaaaggaaattgattatatttttcattgattttaatcatgaagcattacaatgcttatata 14276685  T

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Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 32519624 - 32519656
Alignment:
Q  21 gatacgacccaattcgagtagggatcacactcc 53  Q
    |||| ||||||||||||||||||||||||||||    
T  32519624 gataggacccaattcgagtagggatcacactcc 32519656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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