View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7100_low_9 (Length: 251)

Name: NF7100_low_9
Description: NF7100
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7100_low_9
NF7100_low_9
[»] chr1 (43 HSPs)
chr1 (13-66)||(46754780-46754833)
chr1 (178-251)||(19796985-19797059)
chr1 (178-247)||(1387875-1387945)
chr1 (178-251)||(36880604-36880678)
chr1 (178-251)||(50627224-50627298)
chr1 (178-251)||(3607733-3607807)
chr1 (194-251)||(48645034-48645092)
chr1 (178-251)||(47940574-47940648)
chr1 (178-251)||(51276699-51276773)
chr1 (178-230)||(2125184-2125237)
chr1 (178-230)||(3607843-3607896)
chr1 (178-230)||(15324630-15324683)
chr1 (178-251)||(5189562-5189636)
chr1 (178-251)||(27240928-27241002)
chr1 (178-230)||(4299509-4299562)
chr1 (178-230)||(5189473-5189526)
chr1 (178-230)||(9978166-9978219)
chr1 (178-230)||(14387129-14387182)
chr1 (178-230)||(19797095-19797148)
chr1 (178-226)||(21930496-21930545)
chr1 (178-230)||(47940685-47940738)
chr1 (178-230)||(49285089-49285142)
chr1 (178-230)||(51276809-51276862)
chr1 (178-251)||(957682-957756)
chr1 (178-231)||(2854645-2854699)
chr1 (178-251)||(9978055-9978129)
chr1 (178-251)||(14387019-14387093)
chr1 (178-251)||(15324720-15324794)
chr1 (178-251)||(19954915-19954989)
chr1 (178-231)||(23698615-23698669)
chr1 (178-231)||(28823218-28823272)
chr1 (178-251)||(40647211-40647285)
chr1 (193-223)||(48525940-48525970)
chr1 (178-231)||(48954327-48954381)
chr1 (178-251)||(51789601-51789675)
chr1 (178-226)||(2125074-2125123)
chr1 (178-230)||(9895257-9895310)
chr1 (178-230)||(27926366-27926419)
chr1 (178-230)||(27928412-27928465)
chr1 (178-230)||(42561409-42561462)
chr1 (175-251)||(49284295-49284372)
chr1 (178-230)||(50627135-50627188)
chr1 (178-225)||(25297966-25298014)
[»] chr7 (26 HSPs)
chr7 (178-251)||(38883314-38883388)
chr7 (178-246)||(35665637-35665706)
chr7 (178-251)||(24836113-24836187)
chr7 (178-251)||(35339282-35339356)
chr7 (178-251)||(20184242-20184316)
chr7 (178-251)||(24123759-24123833)
chr7 (178-251)||(31231618-31231692)
chr7 (178-251)||(39617845-39617919)
chr7 (178-230)||(10936584-10936637)
chr7 (183-251)||(30594786-30594855)
chr7 (178-230)||(31231730-31231783)
chr7 (178-230)||(38528526-38528579)
chr7 (178-230)||(47237542-47237595)
chr7 (178-230)||(48103372-48103425)
chr7 (178-248)||(10936474-10936545)
chr7 (178-230)||(24836024-24836077)
chr7 (178-251)||(30259070-30259144)
chr7 (178-247)||(31521530-31521599)
chr7 (178-247)||(34052376-34052446)
chr7 (178-231)||(37093772-37093826)
chr7 (178-247)||(37093865-37093935)
chr7 (178-251)||(45997512-45997586)
chr7 (178-230)||(34052283-34052336)
chr7 (178-230)||(35665730-35665783)
chr7 (178-230)||(38883225-38883278)
chr7 (178-225)||(33721831-33721879)
[»] chr6 (20 HSPs)
chr6 (178-251)||(11687147-11687221)
chr6 (178-248)||(7808705-7808776)
chr6 (187-251)||(20501799-20501864)
chr6 (178-247)||(4890484-4890554)
chr6 (178-251)||(15546725-15546799)
chr6 (178-228)||(4890597-4890648)
chr6 (178-247)||(21379945-21380015)
chr6 (178-230)||(8091066-8091119)
chr6 (178-230)||(21380055-21380108)
chr6 (178-251)||(885478-885552)
chr6 (178-251)||(8091155-8091229)
chr6 (178-251)||(13439789-13439863)
chr6 (178-251)||(14393657-14393731)
chr6 (178-247)||(17279624-17279691)
chr6 (178-251)||(18998121-18998194)
chr6 (178-230)||(885389-885442)
chr6 (178-226)||(6433694-6433743)
chr6 (178-230)||(11687257-11687310)
chr6 (178-230)||(20501710-20501763)
chr6 (187-230)||(3368998-3369042)
[»] chr5 (20 HSPs)
chr5 (178-251)||(15855936-15856010)
chr5 (178-251)||(16473048-16473122)
chr5 (178-251)||(35420616-35420690)
chr5 (178-251)||(20476524-20476598)
chr5 (178-230)||(4265986-4266039)
chr5 (178-248)||(1384333-1384403)
chr5 (178-230)||(13754405-13754458)
chr5 (178-230)||(24397360-24397413)
chr5 (175-230)||(16472956-16473012)
chr5 (175-226)||(32623216-32623268)
chr5 (175-221)||(780915-780962)
chr5 (178-231)||(8364743-8364797)
chr5 (178-251)||(19976355-19976429)
chr5 (178-231)||(33629460-33629514)
chr5 (178-251)||(43539200-43539274)
chr5 (178-230)||(1164910-1164963)
chr5 (178-230)||(15855847-15855900)
chr5 (178-230)||(21259844-21259897)
chr5 (178-230)||(35420726-35420779)
chr5 (175-226)||(4913267-4913319)
[»] chr3 (48 HSPs)
chr3 (178-251)||(36657437-36657511)
chr3 (178-251)||(39850348-39850422)
chr3 (178-251)||(10254662-10254736)
chr3 (178-251)||(10441262-10441336)
chr3 (178-251)||(36822764-36822838)
chr3 (178-240)||(5529996-5530059)
chr3 (178-251)||(4072277-4072351)
chr3 (178-230)||(5529895-5529948)
chr3 (178-251)||(8831834-8831908)
chr3 (178-251)||(21969161-21969235)
chr3 (178-251)||(21991597-21991671)
chr3 (178-251)||(32237398-32237472)
chr3 (178-247)||(45487896-45487966)
chr3 (178-230)||(3970605-3970658)
chr3 (178-230)||(4072388-4072441)
chr3 (178-226)||(10117629-10117678)
chr3 (178-230)||(10441372-10441425)
chr3 (178-230)||(12789610-12789663)
chr3 (178-230)||(21969271-21969324)
chr3 (178-230)||(21991707-21991760)
chr3 (187-251)||(25446343-25446408)
chr3 (178-230)||(36822874-36822927)
chr3 (178-230)||(45487803-45487856)
chr3 (178-230)||(46664180-46664233)
chr3 (178-251)||(3970495-3970569)
chr3 (177-230)||(8831743-8831797)
chr3 (178-251)||(13078167-13078241)
chr3 (178-231)||(26906458-26906512)
chr3 (178-251)||(26976846-26976920)
chr3 (178-251)||(26977783-26977857)
chr3 (178-251)||(35368826-35368900)
chr3 (178-231)||(36278869-36278923)
chr3 (178-231)||(39850458-39850512)
chr3 (178-231)||(43639195-43639249)
chr3 (178-247)||(50099531-50099601)
chr3 (178-251)||(55340297-55340371)
chr3 (178-230)||(1476665-1476718)
chr3 (178-230)||(10017118-10017171)
chr3 (178-230)||(10254572-10254625)
chr3 (178-230)||(13078277-13078330)
chr3 (178-230)||(25488455-25488508)
chr3 (178-230)||(25561015-25561068)
chr3 (178-230)||(32237508-32237561)
chr3 (178-230)||(35368553-35368606)
chr3 (178-230)||(36657547-36657600)
chr3 (178-230)||(38125293-38125346)
chr3 (178-230)||(45713017-45713070)
chr3 (178-221)||(10017232-10017276)
[»] chr8 (15 HSPs)
chr8 (178-251)||(33100649-33100723)
chr8 (175-251)||(24741824-24741901)
chr8 (178-251)||(29780963-29781037)
chr8 (178-251)||(40891106-40891180)
chr8 (178-228)||(33100761-33100812)
chr8 (178-251)||(15882294-15882368)
chr8 (178-247)||(38629571-38629641)
chr8 (178-229)||(17426745-17426797)
chr8 (178-248)||(17426632-17426703)
chr8 (190-251)||(11828612-11828674)
chr8 (178-231)||(38520022-38520076)
chr8 (178-230)||(15882204-15882257)
chr8 (175-251)||(35467263-35467340)
chr8 (178-230)||(37114242-37114295)
chr8 (186-249)||(23940816-23940880)
[»] chr2 (27 HSPs)
chr2 (178-251)||(24101836-24101910)
chr2 (178-251)||(34490549-34490623)
chr2 (178-230)||(9933683-9933736)
chr2 (178-251)||(1923984-1924058)
chr2 (178-251)||(22269815-22269889)
chr2 (178-251)||(45408718-45408792)
chr2 (178-230)||(20892888-20892941)
chr2 (178-251)||(2818759-2818833)
chr2 (178-251)||(7737158-7737232)
chr2 (178-251)||(12850546-12850620)
chr2 (178-251)||(27920665-27920739)
chr2 (178-247)||(43476043-43476113)
chr2 (178-230)||(1924095-1924148)
chr2 (178-230)||(16705737-16705790)
chr2 (178-248)||(34455981-34456052)
chr2 (178-231)||(9281460-9281514)
chr2 (178-251)||(42713781-42713855)
chr2 (183-251)||(7116463-7116532)
chr2 (178-230)||(7737068-7737121)
chr2 (178-226)||(16705851-16705900)
chr2 (178-230)||(23835880-23835933)
chr2 (178-230)||(24101946-24101999)
chr2 (178-230)||(34455889-34455942)
chr2 (178-230)||(34490460-34490513)
chr2 (178-226)||(43858552-43858601)
chr2 (178-230)||(45408629-45408682)
chr2 (183-230)||(2818675-2818723)
[»] scaffold0188 (2 HSPs)
scaffold0188 (178-251)||(7179-7253)
scaffold0188 (178-231)||(7090-7144)
[»] chr4 (23 HSPs)
chr4 (178-231)||(18417661-18417715)
chr4 (178-251)||(24915798-24915872)
chr4 (178-251)||(42274496-42274570)
chr4 (178-231)||(42274606-42274660)
chr4 (178-230)||(530783-530836)
chr4 (178-226)||(4688251-4688300)
chr4 (178-230)||(52824243-52824296)
chr4 (188-251)||(20435154-20435218)
chr4 (178-251)||(530673-530747)
chr4 (178-251)||(1299005-1299079)
chr4 (178-251)||(3422433-3422507)
chr4 (178-251)||(4552878-4552952)
chr4 (178-251)||(18417750-18417824)
chr4 (178-251)||(21048709-21048783)
chr4 (178-247)||(24969545-24969615)
chr4 (178-247)||(27434707-27434777)
chr4 (178-251)||(32318724-32318798)
chr4 (178-247)||(55107621-55107691)
chr4 (178-230)||(1298916-1298969)
chr4 (178-230)||(20435254-20435307)
chr4 (178-251)||(23928572-23928645)
chr4 (178-230)||(24969658-24969711)
chr4 (178-229)||(3113168-3113220)
[»] scaffold0595 (1 HSPs)
scaffold0595 (178-251)||(5798-5874)
[»] scaffold0163 (1 HSPs)
scaffold0163 (178-251)||(1943-2017)
[»] scaffold0137 (1 HSPs)
scaffold0137 (178-231)||(10120-10174)
[»] scaffold0122 (2 HSPs)
scaffold0122 (178-251)||(45927-46001)
scaffold0122 (178-230)||(45838-45891)
[»] scaffold0107 (1 HSPs)
scaffold0107 (178-231)||(51067-51121)
[»] scaffold0118 (1 HSPs)
scaffold0118 (178-230)||(14446-14499)
[»] scaffold0069 (1 HSPs)
scaffold0069 (178-230)||(26409-26462)


Alignment Details
Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 46754833 - 46754780
Alignment:
Q  13 aatatttaatgtaattaagaaaatgtggataaagaattaaagaaatggagtagt 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46754833 aatatttaatgtaattaagaaaatgtggataaagaattaaagaaatggagtagt 46754780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 19796985 - 19797059
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| ||||||||||||||||||||| |||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  19796985 aaaacttaggtacaatttcttaggtgcttttcgtatggtttttaactaaaaataccatgatttcctcaaatccat 19797059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 1387945 - 1387875
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaat 247  Q
    ||||||||||||||||| |||||||| |||||||| |||||||||||||| ||| ||||||||||||||||    
T  1387945 aaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaagataccatgatttcctcaaat 1387875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 36880678 - 36880604
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| ||||| || |||||||| |||||||||||||||||| ||||||||||||||||||||    
T  36880678 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaataccatgatttcctcaaatccat 36880604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 50627298 - 50627224
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| ||||  || |||||||| |||||||||||||||||||||||||||||||||||||||    
T  50627298 aaaacttaggtacaattccttatatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccat 50627224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 3607733 - 3607807
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||||||||||| ||||||||||||| |||| ||| ||||||||||||||   ||||||||||||||||||||||    
T  3607733 aaaatttaggtagaatttcttaggtgctttttgtatggttcttaactaaattcatcatgatttcctcaaatccat 3607807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 48645034 - 48645092
Alignment:
Q  194 ttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||    
T  48645034 ttcttaggtgcttttcgtatgcttcttaactaaaaatatcatgatttcctcaaatccat 48645092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 47940574 - 47940648
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||||||   | |||||||||||| |||||||    
T  47940574 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcgaatccat 47940648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 51276699 - 51276773
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||||||||||| |||||| |||||| |||||||| ||||||||||||||   || |||||||||||||||||||    
T  51276699 aaaatttaggtataatttcataggtgcttttcgtatggttcttaactaaattcattatgatttcctcaaatccat 51276773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 2125237 - 2125184
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||||||||||||||||||||||||| ||||||||  |||||||||||||||||    
T  2125237 aaaatttaggtacaatttcttaggtgcttttcgtatagttcttaactaaaaata 2125184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 3607896 - 3607843
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  3607896 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaaaata 3607843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 15324630 - 15324683
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  15324630 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaaaata 15324683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 5189636 - 5189562
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    ||||||||||||||||| ||||| || |||||||| ||||||||||||||   | ||||||||||| ||||||||    
T  5189636 aaaatttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccat 5189562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 27240928 - 27241002
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||   | |||||||| |||||||||||    
T  27240928 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattttctcaaatccat 27241002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 4299562 - 4299509
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||||||| |||| ||||||||||||||||||    
T  4299562 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaaaata 4299509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 5189473 - 5189526
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  5189473 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaata 5189526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 9978219 - 9978166
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  9978219 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaata 9978166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 14387182 - 14387129
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||||||| |||| ||||||||||||||||||    
T  14387182 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaaaata 14387129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 19797148 - 19797095
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  19797148 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaata 19797095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 21930545 - 21930496
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaa 226  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||||||||    
T  21930545 aaaatttaggtacaattacttaggtgtttttcgtatggttcttaactaaa 21930496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 47940738 - 47940685
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||||||| |||| ||||||||||||||||||    
T  47940738 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaaaata 47940685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 49285142 - 49285089
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  49285142 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaata 49285089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 51276862 - 51276809
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| ||||||||||||||||||||| |||||||| |||||||| |||||||||    
T  51276862 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttagctaaaaata 51276809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 957756 - 957682
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||| |||||||||||||||| |||||||| | ||||||||||||   | |||||||| |||||||||||    
T  957756 aaaacttagatacaatttcttaggtgtttttcgtatgattcttaactaaattcaccatgattttctcaaatccat 957682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 2854699 - 2854645
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatat 231  Q
    |||| |||||||||||| |||||||  |||||||| |||||||||||||||||||    
T  2854699 aaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaaaatat 2854645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 9978055 - 9978129
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    ||||||||||||||||| |||| ||| |||||||| | ||||||||||||   |  |||||||||||||||||||    
T  9978055 aaaatttaggtacaattccttatgtgcttttcgtatgattcttaactaaattcactatgatttcctcaaatccat 9978129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 14387019 - 14387093
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgt-tttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| ||||| ||  ||||||| ||||||||||||||   | ||||||||||||||||||||    
T  14387019 aaaacttaggtacaattccttagatgcatttcgtatggttcttaactaaattcaccatgatttcctcaaatccat 14387093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 15324794 - 15324720
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||||||| |||||||| |||| ||| |||||||| ||||||||||||||   |  |||||||||||||||||||    
T  15324794 aaaatttatgtacaattccttatgtgcttttcgtatggttcttaactaaattcactatgatttcctcaaatccat 15324720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 19954915 - 19954989
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||| ||| ||||||||  |||||||||||||   | ||||||||||||||||||||    
T  19954915 aaaacttaggtacaattccttatgtgcttttcgtatagttcttaactaaattcaccatgatttcctcaaatccat 19954989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 23698669 - 23698615
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatat 231  Q
    |||| |||||||||||| |||||||  |||||||| |||||||||||||||||||    
T  23698669 aaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaaaatat 23698615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 28823272 - 28823218
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatat 231  Q
    ||||||||| |||||||||||||| | |||| ||| |||||||||||||||||||    
T  28823272 aaaatttagatacaatttcttaggagttttttgtatggttcttaactaaaaatat 28823218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 40647285 - 40647211
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||||||| | || |||||||||   | ||||||||||||||||||||    
T  40647285 aaaacttaggtacaattccttaggtgcttttcgtatgatttttaactaaattcaccatgatttcctcaaatccat 40647211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 223
Target Start/End: Original strand, 48525940 - 48525970
Alignment:
Q  193 tttcttaggtgttttcgtacggttcttaact 223  Q
    |||||||||||||||||||||||||||||||    
T  48525940 tttcttaggtgttttcgtacggttcttaact 48525970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 48954381 - 48954327
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatat 231  Q
    |||| |||||||||||| |||||||  |||||||| |||||||||||||||||||    
T  48954381 aaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaaaatat 48954327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 51789601 - 51789675
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||||||| |||| |||||||||   | |||||||||||||| |||||    
T  51789601 aaaacttaggtacaattccttaggtgattttcgtatggtttttaactaaattcaccatgatttcctcaattccat 51789675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 2125074 - 2125123
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaa 226  Q
    ||||||||| |||||||||||| ||| |||||||| ||||||||||||||    
T  2125074 aaaatttagttacaatttcttatgtgcttttcgtatggttcttaactaaa 2125123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 9895257 - 9895310
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||||||||||| ||||| ||||||  |||||||| ||||||||||||||||||    
T  9895257 aaaatttaggtataattttttaggtacttttcgtatggttcttaactaaaaata 9895310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 27926419 - 27926366
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| ||| |||||||| |||||||| |||||||| ||||||||||||||||||    
T  27926419 aaaacttatgtacaattccttaggtgcttttcgtatggttcttaactaaaaata 27926366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 27928465 - 27928412
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaata 230  Q
    |||| ||| |||||||| |||||||||||| |||| ||||||||||||||||||    
T  27928465 aaaacttatgtacaattccttaggtgtttttcgtatggttcttaactaaaaata 27928412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 42561462 - 42561409
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||| ||| ||||||||||||||||||    
T  42561462 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaaaata 42561409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 49284295 - 49284372
Alignment:
Q  175 gaaaaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    ||||||| |||||||||||||||||| || |||| ||| ||||||||||||||   | |||||||| || ||||||||    
T  49284295 gaaaaaacttaggtacaatttcttagttgttttttgtatggttcttaactaaattcaccatgattttcttaaatccat 49284372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 50627135 - 50627188
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| ||||| || |||||||| ||||||||||||||||||    
T  50627135 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaata 50627188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 25298014 - 25297966
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaa 225  Q
    |||| |||||||||||| |||||||| |||||||| |||||||||||||    
T  25298014 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaa 25297966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 38883388 - 38883314
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||||||||||    
T  38883388 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccat 38883314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 35665637 - 35665706
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaa 246  Q
    |||| |||||||||||| |||||||| |||||||| |||||||||||||||||| |||||||| ||||||    
T  35665637 aaaacttaggtacaattgcttaggtgcttttcgtatggttcttaactaaaaataccatgattttctcaaa 35665706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 24836187 - 24836113
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||   | ||||||||||||||||||||    
T  24836187 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccat 24836113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 35339282 - 35339356
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||   ||||||||||| ||||||||||    
T  35339282 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatgatttcttcaaatccat 35339356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 20184242 - 20184316
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||||||| | ||||||||||||   | ||||||||||||||||||||    
T  20184242 aaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaattcaccatgatttcctcaaatccat 20184316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 24123759 - 24123833
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    ||||||||||||||||| |||| ||  |||| ||| ||||| ||||||||||||  |||||||||||||||||||    
T  24123759 aaaatttaggtacaattccttatgtactttttgtatggttcctaactaaaaatactatgatttcctcaaatccat 24123833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 31231618 - 31231692
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||| ||| ||||||||||||||   | ||||||||||||||||||||    
T  31231618 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccat 31231692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 39617845 - 39617919
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtt-ttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||||||||| |||| |||||| ||||||||||||||   | |||||||||||| |||||||    
T  39617845 aaaacttaggtacaatttcttagatgttcttcgtatggttcttaactaaattcaccatgatttcctccaatccat 39617919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 10936637 - 10936584
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  10936637 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaata 10936584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 30594855 - 30594786
Alignment:
Q  183 ttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||||||||||| ||||| || |||||||| ||||||||||||||   | ||||||||||||||||||||    
T  30594855 ttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccat 30594786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 31231783 - 31231730
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  31231783 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaata 31231730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 38528579 - 38528526
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  38528579 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaata 38528526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 47237595 - 47237542
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| ||||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  47237595 aaaacttaggtacaatttctaaggtgcttttcgtatggttcttaactaaaaata 47237542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 48103372 - 48103425
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| ||||||||||||||||||||| |||||||| | ||||||||||||||||    
T  48103372 aaaacttaggtacaatttcttaggtgtttttcgtatgattcttaactaaaaata 48103425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 10936474 - 10936545
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatc 248  Q
    |||| ||| |||||||| |||||||| |||||||||||||||||||||||   | ||||| |||||||||||    
T  10936474 aaaacttatgtacaattccttaggtgcttttcgtacggttcttaactaaattcaccatgacttcctcaaatc 10936545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 24836024 - 24836077
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| |||||| |||||||||||    
T  24836024 aaaacttaggtacaattgcttaggtgcttttcgtatggttctnaactaaaaata 24836077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 30259070 - 30259144
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| ||||| || ||||||||||||||   | |||||||| |||||||||||    
T  30259070 aaaacttaggtacaattccttaggtgcttttcctatggttcttaactaaattcaccatgattttctcaaatccat 30259144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 31521530 - 31521599
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaat 247  Q
    ||||||||| ||||||||||||| || |||||||| ||||||||||||||  || |||||||| |||||||    
T  31521530 aaaatttag-tacaatttcttagatgcttttcgtatggttcttaactaaatttaccatgattttctcaaat 31521599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 34052446 - 34052376
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaat 247  Q
    |||| |||||||||||| |||||||| |||||||| |||||||| |||||   | ||||||||||||||||    
T  34052446 aaaacttaggtacaattccttaggtgcttttcgtatggttcttagctaaattcaccatgatttcctcaaat 34052376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 37093772 - 37093826
Alignment:
Q  178 aaaatttaggtacaatttcttaggt-gttttcgtacggttcttaactaaaaatat 231  Q
    |||||||||||||||||||||||||  |||||||| | ||||||| |||||||||    
T  37093772 aaaatttaggtacaatttcttaggtatttttcgtatgattcttaattaaaaatat 37093826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 37093935 - 37093865
Alignment:
Q  178 aaaatttaggtacaatttcttaggt-gttttcgtacggttcttaactaaaaatatcatgatttcctcaaat 247  Q
    ||||||||| |||||||||||||||  |||||||| |||| |||||||||   | ||||||||||||||||    
T  37093935 aaaatttagatacaatttcttaggtacttttcgtatggtttttaactaaattcaccatgatttcctcaaat 37093865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 45997512 - 45997586
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||||| || ||| |||| ||| ||||||||||||||   | ||||||||||||||||||||    
T  45997512 aaaacttaggtacaatttcatatgtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccat 45997586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 34052283 - 34052336
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| ||||||||| || |||||||| |||||||| ||||||||||||||||||    
T  34052283 aaaacttaggtacatttccttaggtgcttttcgtatggttcttaactaaaaata 34052336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 35665783 - 35665730
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| |||| |||||||||||||    
T  35665783 aaaacttaggtacaattccttaggtgcttttcgtatggtttttaactaaaaata 35665730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 38883225 - 38883278
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| ||||| || |||||||| ||||||||||||||||||    
T  38883225 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaata 38883278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 33721831 - 33721879
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaa 225  Q
    |||| |||||||||||| |||||||| |||||||| |||||||||||||    
T  33721831 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaa 33721879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 11687147 - 11687221
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||||||||||    
T  11687147 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccat 11687221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 7808776 - 7808705
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatc 248  Q
    |||| |||||||||||| |||||||| |||||||| |||||||||||||||||| |||||||||||||||||    
T  7808776 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaataccatgatttcctcaaatc 7808705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 20501864 - 20501799
Alignment:
Q  187 gtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    ||||||||||||||||| |||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  20501864 gtacaatttcttaggtgcttttcgtatggttcttaactaaaaataccatgatttcttcaaatccat 20501799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 4890484 - 4890554
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaatatcatgatttcctcaaat 247  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||||  || ||||||||||||||||    
T  4890484 aaaacttaggtacaatttcttaggtgtttttcgtatggttcttaactaaatttaccatgatttcctcaaat 4890554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 15546799 - 15546725
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||| ||||  || ||||||||||||||||||||    
T  15546799 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaatttaccatgatttcctcaaatccat 15546725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 4890648 - 4890597
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaa 228  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||||||||||    
T  4890648 aaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaa 4890597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 21379945 - 21380015
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaat 247  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||   | ||||||||||||||||    
T  21379945 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaat 21380015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 8091066 - 8091119
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    ||||||||| ||||||| |||||||| |||||||| ||||||||||||||||||    
T  8091066 aaaatttagatacaattccttaggtgcttttcgtatggttcttaactaaaaata 8091119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 21380108 - 21380055
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  21380108 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaata 21380055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 885552 - 885478
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| ||||| || | ||||||||||||   |||||||||| |||||||||||    
T  885552 aaaacttaggtacaattccttaggtgcttttcctatgattcttaactaaattcatcatgattttctcaaatccat 885478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 8091229 - 8091155
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||   | | ||||||||| ||||||||    
T  8091229 aaaacttaggtacaattgcttaggtgcttttcgtatggttcttaactaaattcaccgtgatttccttaaatccat 8091155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 13439863 - 13439789
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |  ||||||||| |||| ||||||||||||||   | ||||||||||||||||||||    
T  13439863 aaaacttaggtacaattacgcaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaatccat 13439789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 14393731 - 14393657
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| ||||||| |||| |||||||| |||| ||| ||||||||||||||   | ||||||||||||||||||||    
T  14393731 aaaacttaggtataattccttaggtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccat 14393657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 17279691 - 17279624
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgttttcgtacggttcttaactaaaaatatcatgatttcctcaaat 247  Q
    |||| |||||||||||||||||||||  ||||||  |||||||||||||   ||||||||||| ||||||    
T  17279691 aaaacttaggtacaatttcttaggtg--ttcgtatagttcttaactaaattcatcatgatttcttcaaat 17279624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 18998121 - 18998194
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| ||||||||| |||||||||||||   | |||||||||||| |||||||    
T  18998121 aaaacttaggtacaattccttaggtgtttttcgtac-gttcttaactaaattcaccatgatttcctcgaatccat 18998194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 885389 - 885442
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||| ||| ||||||||||||||||||    
T  885389 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaaaata 885442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 6433694 - 6433743
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaa 226  Q
    |||| ||||||| ||||||||||||| |||||||| ||||||||||||||    
T  6433694 aaaacttaggtataatttcttaggtgcttttcgtatggttcttaactaaa 6433743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 11687310 - 11687257
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| ||||| || |||||||| ||||||||||||||||||    
T  11687310 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaata 11687257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 20501710 - 20501763
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaata 230  Q
    |||| |||| ||||||| |||||||||||| |||| ||||||||||||||||||    
T  20501710 aaaacttagttacaattccttaggtgtttttcgtatggttcttaactaaaaata 20501763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 3368998 - 3369042
Alignment:
Q  187 gtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||    
T  3368998 gtacaattccttaggtgcttttcgtatggttcttaactaaaaata 3369042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 15856010 - 15855936
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||||||||||    
T  15856010 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccat 15855936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 16473122 - 16473048
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||||||||||    
T  16473122 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccat 16473048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 35420616 - 35420690
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||||||||||    
T  35420616 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccat 35420690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 20476598 - 20476524
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||   ||||||||||||||||||||||    
T  20476598 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatgatttcctcaaatccat 20476524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 4265986 - 4266039
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  4265986 aaaacttaggtacaatttcttaggtgtttttcgtatggttcttaactaaaaata 4266039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 1384333 - 1384403
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgttttcgtacggttcttaactaaaaatatcatgatttcctcaaatc 248  Q
    |||||||||||| ||||||||||||||| || ||  ||| |||||||||  ||| ||||||||||||||||    
T  1384333 aaaatttaggtaaaatttcttaggtgttatcatatagtttttaactaaatttattatgatttcctcaaatc 1384403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 13754458 - 13754405
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaata 230  Q
    |||||||| |||||||| |||||||||||| |||| ||||||||||||||||||    
T  13754458 aaaatttatgtacaattacttaggtgtttttcgtatggttcttaactaaaaata 13754405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 24397413 - 24397360
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  24397413 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaata 24397360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 16472956 - 16473012
Alignment:
Q  175 gaaaaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    ||||||| |||||||||||| ||||| || |||||||| ||||||||||||||||||    
T  16472956 gaaaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaata 16473012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 32623216 - 32623268
Alignment:
Q  175 gaaaaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaa 226  Q
    ||||||| |||||||||||| |||||||| |||||||| ||||||||||||||    
T  32623216 gaaaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 32623268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 780962 - 780915
Alignment:
Q  175 gaaaaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaa 221  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||||    
T  780962 gaaaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaa 780915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 8364797 - 8364743
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatat 231  Q
    |||| |||||||||||| |||||||| |||| ||| |||||||||||||||||||    
T  8364797 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaaaatat 8364743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 19976429 - 19976355
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    ||||||||||||||||| |||||||| ||||||||  ||| || | ||||  || ||||||||||||||||||||    
T  19976429 aaaatttaggtacaattccttaggtgcttttcgtatagttattgattaaatttaccatgatttcctcaaatccat 19976355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 33629514 - 33629460
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatat 231  Q
    ||||||||||||||||| ||||| || |||||||| | |||||||||||||||||    
T  33629514 aaaatttaggtacaattccttagatgtttttcgtatgattcttaactaaaaatat 33629460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 43539274 - 43539200
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    ||||||||||||||||| |||||||| |||||||| ||| ||||||||||   ||| |||||| || ||||||||    
T  43539274 aaaatttaggtacaattccttaggtgtttttcgtatggtccttaactaaattcatcgtgattttcttaaatccat 43539200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 1164963 - 1164910
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    ||||||||||||||||| ||||| || |||||||| ||||||||| ||||||||    
T  1164963 aaaatttaggtacaattccttagctgcttttcgtatggttcttaattaaaaata 1164910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 15855847 - 15855900
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| ||||| || |||||||| ||||||||||||||||||    
T  15855847 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaata 15855900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 21259897 - 21259844
Alignment:
Q  178 aaaatttaggtacaatttcttaggt-gttttcgtacggttcttaactaaaaata 230  Q
    ||||||||||||||||| |||||||  ||||| || ||||||||||||||||||    
T  21259897 aaaatttaggtacaattccttaggtacttttcttatggttcttaactaaaaata 21259844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 35420779 - 35420726
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| ||||| || |||||||| ||||||||||||||||||    
T  35420779 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaata 35420726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 4913319 - 4913267
Alignment:
Q  175 gaaaaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaa 226  Q
    ||||||| ||| ||||||||||||||||| |||| ||| ||||||||||||||    
T  4913319 gaaaaaacttacgtacaatttcttaggtgttttttgtatggttcttaactaaa 4913267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 36657437 - 36657511
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||||||||||    
T  36657437 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccat 36657511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 39850348 - 39850422
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||| ||| |||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  39850348 aaaacttaggtactattccttaggtgtttttcgtatggttcttaactaaaaataccatgatttcctcaaatccat 39850422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 10254736 - 10254662
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||||||||   |||||||||| |||||||||||    
T  10254736 aaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatgattttctcaaatccat 10254662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 10441262 - 10441336
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| ||| |||||||| |||||||| |||| ||| | |||||||||||||||||||||||||||||||||||||    
T  10441262 aaaacttaagtacaattccttaggtgcttttggtatgattcttaactaaaaatatcatgatttcctcaaatccat 10441336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 36822764 - 36822838
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| ||||| || |||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  36822764 aaaacttaggtacaattccttagctgcttttcgtatggttcttaactaaaaataccatgatttcctcagatccat 36822838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 5530059 - 5529996
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttc 240  Q
    |||||||||||||||||||||| ||| |||||||| |||| ||||||||||||| |||||||||    
T  5530059 aaaatttaggtacaatttcttaagtgcttttcgtatggttattaactaaaaataccatgatttc 5529996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 4072277 - 4072351
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||||||   | |||||||||||| |||||||    
T  4072277 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcgaatccat 4072351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 5529895 - 5529948
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  5529895 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaaaata 5529948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 8831908 - 8831834
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| ||||||||||||| ||||||| |||||||| ||||||||||||||   | ||||||||| ||||||||||    
T  8831908 aaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaattcaccatgatttcttcaaatccat 8831834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 21969161 - 21969235
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||   | ||||||||||| ||||||||    
T  21969161 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccat 21969235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 21991597 - 21991671
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||   | ||||||||||| ||||||||    
T  21991597 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccat 21991671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 32237398 - 32237472
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||||||| |||| ||||||||||||||  || |||||||| |||| ||||||    
T  32237398 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaatttaccatgattttctcagatccat 32237472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 45487966 - 45487896
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaat 247  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||   | ||||||||||||||||    
T  45487966 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaat 45487896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 3970658 - 3970605
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| ||||||||||||||||||||  |||||||| ||||||||||||||||||    
T  3970658 aaaacttaggtacaatttcttaggtacttttcgtatggttcttaactaaaaata 3970605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 4072441 - 4072388
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||||||| |||| ||||||||||||||||||    
T  4072441 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaaaata 4072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 10117678 - 10117629
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaa 226  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||||||||    
T  10117678 aaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 10117629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 10441425 - 10441372
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  10441425 aaaacttaggtacaattccttaggtgcttttggtacggttcttaactaaaaata 10441372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 12789610 - 12789663
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||||||| |||| ||||||||||||||||||    
T  12789610 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaaaata 12789663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 21969324 - 21969271
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  21969324 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaata 21969271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 21991760 - 21991707
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  21991760 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaata 21991707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 25446408 - 25446343
Alignment:
Q  187 gtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||||||| |||||||| |||||||| ||||||||||||||   | ||||||||||||||||||||    
T  25446408 gtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccat 25446343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 36822927 - 36822874
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| ||||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  36822927 aaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaaaata 36822874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 45487803 - 45487856
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  45487803 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaata 45487856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 46664180 - 46664233
Alignment:
Q  178 aaaatttaggtacaatttcttaggt-gttttcgtacggttcttaactaaaaata 230  Q
    |||||||||||||||||||||||||  ||||||||  |||||||||||||||||    
T  46664180 aaaatttaggtacaatttcttaggtatttttcgtatagttcttaactaaaaata 46664233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 3970495 - 3970569
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||| ||||| |||||||| |||||||| ||||||||||||||   | ||||||||||| ||||||||    
T  3970495 aaaacttaggtgcaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccat 3970569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 8831743 - 8831797
Alignment:
Q  177 aaaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    ||||| |||||||||||| |||||||| |||||||| |||||| |||||||||||    
T  8831743 aaaaacttaggtacaattccttaggtgcttttcgtatggttctaaactaaaaata 8831797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 13078167 - 13078241
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||| ||||| |||||||| |||||||| ||||||||||||||   | ||||||||||| ||||||||    
T  13078167 aaaacttaggtgcaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccat 13078241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 26906458 - 26906512
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatat 231  Q
    |||| |||||||||||| |||||||  |||||||| |||||||||||||||||||    
T  26906458 aaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaaaatat 26906512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 26976846 - 26976920
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| ||||||||||||||||||||| ||||||||  |||||||| ||||  ||  ||||||| |||||||||||    
T  26976846 aaaacttaggtacaatttcttaggtgcttttcgtatagttcttaattaaatttagtatgattttctcaaatccat 26976920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 26977857 - 26977783
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||||||||| |  ||||| || ||||||||||||||  ||  |||||||||||||||||||    
T  26977857 aaaacttaggtacaatttcttagatacttttcatatggttcttaactaaatttagtatgatttcctcaaatccat 26977783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 35368900 - 35368826
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| ||||||||||||||||| ||| |||||||| |||| |||||||||   | |||||||| |||||||||||    
T  35368900 aaaacttaggtacaatttcttatgtgtttttcgtatggtttttaactaaattcaccatgattttctcaaatccat 35368826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 36278923 - 36278869
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatat 231  Q
    |||| |||||||||||| |||||||  |||||||| |||||||||||||||||||    
T  36278923 aaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaaaatat 36278869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 39850512 - 39850458
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatat 231  Q
    |||| |||||||||||| |||||||| |||||||| | |||||||||||||||||    
T  39850512 aaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaaaatat 39850458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 43639249 - 43639195
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatat 231  Q
    |||| |||||||||||| |||||||| |||||||| | |||||||||||||||||    
T  43639249 aaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaaaatat 43639195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 50099601 - 50099531
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaat 247  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||   | ||| ||||||||||||    
T  50099601 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccataatttcctcaaat 50099531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 55340297 - 55340371
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||||||||||||||||||||| ||| |||||||| | |||||||||| |   | |||||||| |||||||||||    
T  55340297 aaaatttaggtacaatttcttatgtgtttttcgtatgattcttaactatattcaccatgattttctcaaatccat 55340371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 1476718 - 1476665
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| ||||| || ||||||||||||||||||    
T  1476718 aaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaaaata 1476665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 10017118 - 10017171
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| ||||| || ||||||||||||||||||    
T  10017118 aaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaaaata 10017171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 10254572 - 10254625
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| ||||| || ||||||||||||||||||    
T  10254572 aaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaaaata 10254625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 13078330 - 13078277
Alignment:
Q  178 aaaatttaggtacaatttcttaggt-gttttcgtacggttcttaactaaaaata 230  Q
    |||| ||||||||||||||||||||  |||||||| | ||||||||||||||||    
T  13078330 aaaacttaggtacaatttcttaggtacttttcgtatgattcttaactaaaaata 13078277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 25488508 - 25488455
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||| ||| ||||||||||||||||||    
T  25488508 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaaaata 25488455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 25561015 - 25561068
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||| ||| ||||||||||||||||||    
T  25561015 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaaaata 25561068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 32237561 - 32237508
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||| ||||||||    
T  32237561 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaaaata 32237508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 35368553 - 35368606
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||| ||| |||||||| ||||||||||||||||||    
T  35368553 aaaacttaggtacaattccttatgtgcttttcgtatggttcttaactaaaaata 35368606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 36657600 - 36657547
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| ||||| || |||||||| ||||||||||||||||||    
T  36657600 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaata 36657547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 38125346 - 38125293
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaata 230  Q
    |||| ||||||||||||  ||||||||||| |||| ||||||||||||||||||    
T  38125346 aaaacttaggtacaattcattaggtgtttttcgtatggttcttaactaaaaata 38125293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 45713070 - 45713017
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| |||||| |||||||||||    
T  45713070 aaaacttaggtacaattccttaggtgcttttcgtatggttctaaactaaaaata 45713017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 10017276 - 10017232
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaa 221  Q
    ||||||||||||||||| |||||||| |||||||| |||||||||    
T  10017276 aaaatttaggtacaattccttaggtgcttttcgtatggttcttaa 10017232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 33100649 - 33100723
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| ||||||||||||||||||||| |||||||| |||||||||||||||||| | | ||||||||||||||||    
T  33100649 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaaaataccgttatttcctcaaatccat 33100723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 24741824 - 24741901
Alignment:
Q  175 gaaaaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    ||||||| |||||||||||| |||||||| |||||||| ||||||||||||||   | ||||||||||||||||||||    
T  24741824 gaaaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccat 24741901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 29780963 - 29781037
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    ||||||||||||||||| |||||||| |||||||| |||| |||||||||  || ||| ||||||||||||||||    
T  29780963 aaaatttaggtacaattccttaggtgcttttcgtatggtttttaactaaatttaccataatttcctcaaatccat 29781037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 40891180 - 40891106
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||   | ||||||||||||||||||||    
T  40891180 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccat 40891106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 33100812 - 33100761
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaa 228  Q
    |||| ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  33100812 aaaacttaggtacaatttcttatgtgcttttcgtacggttcttaactaaaaa 33100761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 15882368 - 15882294
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||   | |||||||| |||||||||||    
T  15882368 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattttctcaaatccat 15882294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 38629641 - 38629571
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaatatcatgatttcctcaaat 247  Q
    |||| |||||||||||| |||||||||||| |||| ||||||||||||||   | ||||||||||||||||    
T  38629641 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaat 38629571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 17426797 - 17426745
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaat 229  Q
    |||| ||||||||||||| ||||||| |||||||| |||||||||||||||||    
T  17426797 aaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaaaat 17426745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 17426632 - 17426703
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatc 248  Q
    |||| ||||||||||||  ||||||| |||||||| ||||||||||||||   | |||||||||||||||||    
T  17426632 aaaacttaggtacaattcattaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatc 17426703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 11828612 - 11828674
Alignment:
Q  190 caatttcttaggtgtttt-cgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||||||||||||||||| |||| ||||||||||||||   | ||| ||||||||||||||||    
T  11828612 caatttcttaggtgtttttcgtatggttcttaactaaattcaccataatttcctcaaatccat 11828674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 38520022 - 38520076
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatat 231  Q
    |||||||||||| |||| ||||| || |||||||| |||||||||||||||||||    
T  38520022 aaaatttaggtataattccttagttgcttttcgtatggttcttaactaaaaatat 38520076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 15882204 - 15882257
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||| ||| ||||||||||||||||||    
T  15882204 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaaaata 15882257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 35467340 - 35467263
Alignment:
Q  175 gaaaaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    ||||||| ||| |||||||| |||| ||| |||||||| ||||||||||||||   ||||||||||| | ||||||||    
T  35467340 gaaaaaacttacgtacaattccttatgtgcttttcgtatggttcttaactaaattcatcatgatttctttaaatccat 35467263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 37114242 - 37114295
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||| ||||||||    
T  37114242 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaaaata 37114295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 23940816 - 23940880
Alignment:
Q  186 ggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatcc 249  Q
    |||||||||||||| ||| |||||||| | ||||||||||||   | ||||||||||||||||||    
T  23940816 ggtacaatttcttaagtgcttttcgtatgattcttaactaaattcaccatgatttcctcaaatcc 23940880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 24101836 - 24101910
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  24101836 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaatataccatgatttcctcaaatccat 24101910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 34490623 - 34490549
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  34490623 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaataccatgatttcctcagatccat 34490549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 9933736 - 9933683
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  9933736 aaaatttaggtacaatttcttaggtgcttttcgtatggttcttaactaaaaata 9933683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 1923984 - 1924058
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||||||   | |||||||||||| |||||||    
T  1923984 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcgaatccat 1924058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 22269889 - 22269815
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| ||| |||||||| ||||| || |||||||| |||||||||||||||| | ||||||||||||||||||||    
T  22269889 aaaacttacgtacaattccttagatgcttttcgtatggttcttaactaaaaaaaacatgatttcctcaaatccat 22269815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 45408792 - 45408718
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||| ||||  || ||||||||||||||||||||    
T  45408792 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaatttaccatgatttcctcaaatccat 45408718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 20892888 - 20892941
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  20892888 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaaaata 20892941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 2818833 - 2818759
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| ||||||||||||  ||||||||||| |||| ||||||||||||||   | ||||||||||||||||||||    
T  2818833 aaaacttaggtacaattctttaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaatccat 2818759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 7737232 - 7737158
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||||||| | ||||||||||||  || ||||||||||||||| ||||    
T  7737232 aaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaatttaccatgatttcctcaaagccat 7737158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 12850546 - 12850620
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    ||||||||||||||||| |||||||  |||| ||| |||| |||||||||  || ||||||||||||||||||||    
T  12850546 aaaatttaggtacaattccttaggtactttttgtatggtttttaactaaatttaccatgatttcctcaaatccat 12850620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 27920739 - 27920665
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| ||||||||||||| |||| || |||||||| ||||||||||||||   | ||||||||||||||||||||    
T  27920739 aaaacttaggtacaattttttagctgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccat 27920665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 43476113 - 43476043
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaatatcatgatttcctcaaat 247  Q
    |||||||||||| |||| |||||||||||| |||| ||||||||||||||   | ||||||||||||||||    
T  43476113 aaaatttaggtataattccttaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaat 43476043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 1924148 - 1924095
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||||||| |||| ||||||||||||||||||    
T  1924148 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaaaata 1924095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 16705737 - 16705790
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  16705737 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaata 16705790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 34456052 - 34455981
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatc 248  Q
    |||||||||||||||||||||| ||| |||||||| ||||| ||| ||||   ||||| |||||||||||||    
T  34456052 aaaatttaggtacaatttcttatgtgtttttcgtatggttcctaattaaattcatcataatttcctcaaatc 34455981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 9281514 - 9281460
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatat 231  Q
    |||| |||||||||||| |||||||  |||||||| |||||||||||||||||||    
T  9281514 aaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaaaatat 9281460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 42713781 - 42713855
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    ||||||||| || |||| |||||||||||| |||| ||||||||||||||   | |||||||| |||||||||||    
T  42713781 aaaatttagatataattccttaggtgtttttcgtatggttcttaactaaattcaccatgattttctcaaatccat 42713855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 7116532 - 7116463
Alignment:
Q  183 ttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||||||||||||||||| || |||||||| ||||||||| ||||  || ||| ||||| ||||||||||    
T  7116532 ttaggtacaatttcttagatgtttttcgtatggttcttaaataaatttaccataatttcatcaaatccat 7116463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 7737068 - 7737121
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| ||||||||||||||||||||| |||| ||| | ||||||||||||||||    
T  7737068 aaaacttaggtacaatttcttaggtgcttttggtatgattcttaactaaaaata 7737121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 16705900 - 16705851
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaa 226  Q
    ||||||||||||||||| |||||||| |||||||| |||| |||||||||    
T  16705900 aaaatttaggtacaattccttaggtgcttttcgtatggtttttaactaaa 16705851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 23835880 - 23835933
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| ||| |||||||| |||||||| |||||||| ||||||||||||||||||    
T  23835880 aaaacttatgtacaattccttaggtgcttttcgtatggttcttaactaaaaata 23835933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 24101999 - 24101946
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| ||| |||||||| |||||||| |||||||| ||||||||||||||||||    
T  24101999 aaaacttaagtacaattccttaggtgcttttcgtatggttcttaactaaaaata 24101946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 34455889 - 34455942
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||| ||||||||    
T  34455889 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaaaata 34455942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 34490460 - 34490513
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaata 230  Q
    |||| ||||||||||||  ||||||||||| |||| ||||||||||||||||||    
T  34490460 aaaacttaggtacaattctttaggtgtttttcgtatggttcttaactaaaaata 34490513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 43858601 - 43858552
Alignment:
Q  178 aaaatttaggtacaatttcttaggt-gttttcgtacggttcttaactaaa 226  Q
    ||||||||||||||||| |||||||  |||||||| ||||||||||||||    
T  43858601 aaaatttaggtacaattccttaggtacttttcgtatggttcttaactaaa 43858552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 45408629 - 45408682
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||| ||| ||||||||||||||||||    
T  45408629 aaaacttaggtacaattccttaggtgttttttgtatggttcttaactaaaaata 45408682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 2818675 - 2818723
Alignment:
Q  183 ttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||||||||||| |||||||| |||||||| | ||||||||||||||||    
T  2818675 ttaggtacaattccttaggtgcttttcgtatgattcttaactaaaaata 2818723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 7253 - 7179
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    ||||||||||||| ||| |||||||| |||||||| ||||||||||||||   ||||||||||||||||||||||    
T  7253 aaaatttaggtacgattccttaggtgcttttcgtatggttcttaactaaattcatcatgatttcctcaaatccat 7179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 7090 - 7144
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatat 231  Q
    ||||||||||||||||| |||||||| |||||||| | |||||||||||||||||    
T  7090 aaaatttaggtacaattccttaggtgtttttcgtatgattcttaactaaaaatat 7144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.00000000009; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 18417661 - 18417715
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatat 231  Q
    |||| |||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  18417661 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatat 18417715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 24915798 - 24915872
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||   | |||||||| |||||||||||    
T  24915798 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattttctcaaatccat 24915872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 42274496 - 42274570
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| ||||| || |||||||| ||||||||||||||   | ||||||||||||||||||||    
T  42274496 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccat 42274570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 42274660 - 42274606
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaatat 231  Q
    |||| |||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  42274660 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaaaatat 42274606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 530836 - 530783
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  530836 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaata 530783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 4688251 - 4688300
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaa 226  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||||||    
T  4688251 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 4688300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 52824243 - 52824296
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  52824243 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaata 52824296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 20435154 - 20435218
Alignment:
Q  188 tacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    ||||||| ||||| || |||||||| ||||||||||||||   ||||||||||||||||||||||    
T  20435154 tacaattccttagatgcttttcgtatggttcttaactaaattcatcatgatttcctcaaatccat 20435218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 530673 - 530747
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||| ||| ||||||||||||||   | ||| ||||||||||||||||    
T  530673 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaattcaccatcatttcctcaaatccat 530747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 1299079 - 1299005
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| ||||| || ||||||||||||||   | |||||||| |||||||||||    
T  1299079 aaaacttaggtacaattccttaggtgcttttcttatggttcttaactaaattcaccatgattttctcaaatccat 1299005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 3422433 - 3422507
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| ||||||||||||||||||||| ||||||||  |||||||| ||||  ||  ||||||| |||||||||||    
T  3422433 aaaacttaggtacaatttcttaggtgcttttcgtatagttcttaattaaatttagtatgattttctcaaatccat 3422507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 4552952 - 4552878
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgttttc-gtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| ||||  || |||| ||| ||||||||||||||   ||||||||||||||||||||||    
T  4552952 aaaacttaggtacaattccttatatgctttctgtatggttcttaactaaattcatcatgatttcctcaaatccat 4552878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 18417824 - 18417750
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| |||| ||| ||||||||| ||||   | ||||||||||||||||||||    
T  18417824 aaaacttaggtacaattccttaggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaatccat 18417750  T

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Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 21048709 - 21048783
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| ||||||||||||  |||| || |||||||| ||||||||||||||   | ||||||||||||||||||||    
T  21048709 aaaacttaggtacaattcgttagatgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccat 21048783  T

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Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 24969545 - 24969615
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaat 247  Q
    |||| ||||||||||||  ||||||| |||||||| ||||||||||||||   | ||||||||||||||||    
T  24969545 aaaacttaggtacaattctttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaat 24969615  T

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Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 27434777 - 27434707
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaat 247  Q
    |||| ||| |||||||| |||||||| |||||||| ||||||||||||||  || ||| ||||||||||||    
T  27434777 aaaacttaagtacaattccttaggtgcttttcgtatggttcttaactaaatttaccataatttcctcaaat 27434707  T

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Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 32318724 - 32318798
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||| ||| |||||||| ||||||||||||||   | ||||||||||||| ||||||    
T  32318724 aaaacttaggtacaattccttatgtgcttttcgtatggttcttaactaaattcaccatgatttcctcagatccat 32318798  T

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Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 55107691 - 55107621
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaat 247  Q
    |||| |||||||||||| |||||||| |||| ||| ||||||| ||||||  || ||||||||||||||||    
T  55107691 aaaacttaggtacaattccttaggtgctttttgtatggttctttactaaatttaccatgatttcctcaaat 55107621  T

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Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 1298916 - 1298969
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||| ||| ||||||||||||||||||    
T  1298916 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaaaata 1298969  T

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Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 20435307 - 20435254
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| ||||||||||||  ||||||| |||||||| ||||||||||||||||||    
T  20435307 aaaacttaggtacaattctttaggtgcttttcgtatggttcttaactaaaaata 20435254  T

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Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 23928572 - 23928645
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||   |||||||| | ||||||||||||   | ||||||||||||||||||||    
T  23928572 aaaacttaggtacaattccttagtgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccat 23928645  T

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Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 24969711 - 24969658
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| ||||||||  |||||||||||||||||    
T  24969711 aaaacttaggtacaattccttaggtgcttttcgtatagttcttaactaaaaata 24969658  T

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Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 3113220 - 3113168
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgttt-tcgtacggttcttaactaaaaat 229  Q
    |||||||||||||||||| |||||||||| |||||   |||||||||||||||    
T  3113220 aaaatttaggtacaattttttaggtgtttgtcgtattattcttaactaaaaat 3113168  T

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Target: scaffold0595 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 5874 - 5798
Alignment:
Q  178 aaaatttaggtacaattt--cttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||||  |||||||| |||||||| ||||||||||||||   | ||||||||||||||||||||    
T  5874 aaaacttaggtacaattttccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccat 5798  T

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Target: scaffold0163 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 1943 - 2017
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||||||||||| ||||  ||||||| |||| ||| ||||||||||||||   | ||||||||||||||||||||    
T  1943 aaaatttaggtataattgtttaggtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccat 2017  T

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Target: scaffold0137 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 10120 - 10174
Alignment:
Q  178 aaaatttaggtacaatttcttaggtgtttt-cgtacggttcttaactaaaaatat 231  Q
    |||| ||||||| |||| |||||||||||| |||| |||||||||||||||||||    
T  10120 aaaacttaggtataattccttaggtgttttgcgtatggttcttaactaaaaatat 10174  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 46001 - 45927
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatatcatgatttcctcaaatccat 251  Q
    |||| |||||||||||| |||||||| ||||| || ||||||||||||||   | |||||||| |||||||||||    
T  46001 aaaacttaggtacaattccttaggtgcttttcttatggttcttaactaaattcaccatgattttctcaaatccat 45927  T

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Target: scaffold0122; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 45838 - 45891
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||| ||| ||||||||||||||||||    
T  45838 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaaaata 45891  T

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Target: scaffold0107 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 51067 - 51121
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaatat 231  Q
    |||| |||||||||||| |||||||  |||||||| |||||||||||||||||||    
T  51067 aaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaaaatat 51121  T

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Target: scaffold0118 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 14446 - 14499
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| ||||||||||||||||||||| ||||| || ||| ||||||||||||||    
T  14446 aaaacttaggtacaatttcttaggtgtttttcctatggtacttaactaaaaata 14499  T

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Target: scaffold0069 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 26409 - 26462
Alignment:
Q  178 aaaatttaggtacaatttcttaggtg-ttttcgtacggttcttaactaaaaata 230  Q
    |||| |||||||||||| |||||||| |||||||| |||| |||||||||||||    
T  26409 aaaacttaggtacaattccttaggtgcttttcgtatggttattaactaaaaata 26462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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