View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7101_low_2 (Length: 428)
Name: NF7101_low_2
Description: NF7101
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7101_low_2 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 335; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 19 - 428
Target Start/End: Complemental strand, 32293533 - 32293125
Alignment:
| Q |
19 |
tgataaacttggaaaatgaggactttgtgaaaagactagtggagcaaactcgatctaaatttcaggttagtgattaagccactgaggctactataattcg |
118 |
Q |
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| T |
32293533 |
tgataaacttggaaaatgaggactttgtgaaaagactagtggagcaaactcgatctaaatttcaggttagtgattaagccactgaggctactataattcg |
32293434 |
T |
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| Q |
119 |
tttaacattagttaataattcttaaccttatgttgcatattagaatttgaaatttaaatgtagnnnnnnnnnctcttcagttttgacaactatgtagact |
218 |
Q |
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| T |
32293433 |
tttaacattagttaataattcttaaccttaggttgcatattagaatttgaaatttaaatgtagtttttttttc-cttcagttttgacaactatgtagact |
32293335 |
T |
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| Q |
219 |
gcttgccaaatggattgtttagtatttgattcggaaagctacttttattgannnnnnnnaaggtttcgtatttgttaatgtttgatcaagttaggagcag |
318 |
Q |
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| T |
32293334 |
gcttgccaaatggattgtttagtatttgattcggaaagctacttttattgattttttttaaggtttcatatttgttaatgtttgatcaagttaggagcag |
32293235 |
T |
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| Q |
319 |
aggttgtcaccatttaatccaaaacggccaaggttggtcgtaggtgtatgacatggcaggtttgatactatatgctataaaaatatttaggactaggagt |
418 |
Q |
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||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32293234 |
aggttgtcaccatttaatccaaaacggccaacgttggtcgcaggtgtatgacatggcaggtttgatactatatgctataaaaatatttaggactaggagt |
32293135 |
T |
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| Q |
419 |
gggtatgatg |
428 |
Q |
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| T |
32293134 |
gggtatgatg |
32293125 |
T |
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