View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7103_high_13 (Length: 237)
Name: NF7103_high_13
Description: NF7103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7103_high_13 |
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Alignment Details
Target: chr5 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 37 - 223
Target Start/End: Original strand, 35092296 - 35092487
Alignment:
| Q |
37 |
gttgcattctccaatcaacttttatttggtggcagtactattgcatcagctagtgnnnnnnnnnnnnactctatagtagtcttgcaaagcatcatgcttt |
136 |
Q |
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| T |
35092296 |
gttgcattctccaatcaacttttatttggtggcagtactattgcatcagctagtgttttttctttttactctatagtagtcttgcaaagcatcatgcttt |
35092395 |
T |
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| Q |
137 |
a-----ttttgattctttgttttactagagaatcctataacatatgcaatgtctacatttttgttggtatgaactctattactagaaataaa |
223 |
Q |
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| T |
35092396 |
attttattttgattctttgttttactagagaatcctataacatatgcaatgtctacatttttgttggtatgaactctattactagaaataaa |
35092487 |
T |
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