View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7103_high_8 (Length: 309)

Name: NF7103_high_8
Description: NF7103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7103_high_8
NF7103_high_8
[»] chr5 (1 HSPs)
chr5 (27-309)||(35091913-35092195)


Alignment Details
Target: chr5 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 27 - 309
Target Start/End: Original strand, 35091913 - 35092195
Alignment:
Q  27 atatatatctttagcagccaggtcatttgctcatgtggctgactcataaaagcacttccactgaaatttagagcagcatatgttacagttataagctttt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35091913 atatatatctttagcagccaggtcatttgctcatgtggctgactcataaaagcacttccactgaaatttagagcagcatatgttacagttataagctttt 35092012  T
Q  127 ttatgtgattcaaaatgttattaatcatttgttttctttgtaagtgcaatatggccaagttgaccatatttgttttatgagaatcactttgttagtagaa 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35092013 ttatgtgattcaaaatgttattaatcatttgttttctttgtaagtgcaatatggccaagttgaccatatttgttttatgagaatcactttgttagtagaa 35092112  T
Q  227 tctgagtttgcattccacttagtaagaatcacatgcttcattgggtcagaaatattggcagattcccgtaagcatatgccaat 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35092113 tctgagtttgcattccacttagtaagaatcacatgcttcattgggtcagaaatattggcagattcacgtaagcatatgccaat 35092195  T

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