View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7103_low_7 (Length: 375)
Name: NF7103_low_7
Description: NF7103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7103_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 68 - 357
Target Start/End: Complemental strand, 41241848 - 41241563
Alignment:
| Q |
68 |
tcacacttgatagtaattattacatgggaagggtcataagaattgagaagatgatgatgaggatatcaaacgagcctgatcaatcacaatgaccaatata |
167 |
Q |
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| T |
41241848 |
tcacacttgatagtaattattacatgggaagggtcataagaattgagaagatgatgaggaggatatcaaacaagcctgatcaatcacaatgaccaatata |
41241749 |
T |
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| Q |
168 |
gatattaaggcgacacctatgtggaatatgaacccttgaaacttgaactgggaacaacatagatccaagtatcatgagcatgaatcaggtacctacctat |
267 |
Q |
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| T |
41241748 |
gatattaaggcgacacctatgtagaatatgaacccttgaaacttgaactgggaacaacatagatccaagtatcatgagcatgaatcaggtacgtacctat |
41241649 |
T |
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| Q |
268 |
taagtcccccggagtacaaccttgacgaatacacagtcaacaacaaaaataaacaaattaacctaaacataatgggaaggacccaaaaac |
357 |
Q |
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| T |
41241648 |
tcagtcccccggagtacaaccttgacgaatacacagtcaacaacaaaaataagca----aacctaaacataatgggaaggacccaaaaac |
41241563 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 41246003 - 41246072
Alignment:
| Q |
143 |
ctgatcaatcacaatgaccaatatagatattaaggcgacacctatgtggaatatgaacccttgaaacttg |
212 |
Q |
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| T |
41246003 |
ctgagcaatcacaatgaccaatagaggtattaaggcgacgccgatgtgaaacctgaacccttgaaacttg |
41246072 |
T |
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