View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7107_high_13 (Length: 277)
Name: NF7107_high_13
Description: NF7107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7107_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 19 - 271
Target Start/End: Original strand, 42958655 - 42958903
Alignment:
| Q |
19 |
tttatgaacaagtcaatgcgcgttatatcatcctctacactagcattaactaactaatctaccttcctaaaacaacactcatctagtct-agtctatttc |
117 |
Q |
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| T |
42958655 |
tttatgaacaagtcaatgcgcgttatatcatcctctacactagcattaactaactaatctaccttcctaaaacaacactcatctagtctaagtctatttc |
42958754 |
T |
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| Q |
118 |
ctttttaataaagaaagccaattccatttatttttacgtgtgtggacggacattttcttcatgttaaaataatattatgaacaaggaaaaaacttgcttt |
217 |
Q |
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| T |
42958755 |
ctttttaataaagaaagccaattccatttatttttacgtgtgt----ggacattttcttcatgttaaaataatattatgaacaaggaaaaaacttgcttt |
42958850 |
T |
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| Q |
218 |
aaccttcggatgattaaggttcttttccctaaaaattagatggttaacaccaaa |
271 |
Q |
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|||| || |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42958851 |
aacc-tctgatgattaaggttcttttccctaaaaattagatggttaacaccaaa |
42958903 |
T |
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