View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7107_high_18 (Length: 212)
Name: NF7107_high_18
Description: NF7107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7107_high_18 |
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Alignment Details
Target: chr3 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 33221329 - 33221524
Alignment:
| Q |
1 |
acactaagttttatctatcaacaataaagatcggaaaagggattgaaaatgaaagaaaagaaacacaatacaatcgtaaaatgaaagggatgtgaatttt |
100 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
33221329 |
acactaagttttatctatcaccaataaagatcggaaaagggattgaaaatgaaagaaaagaaacacaatacaatcgtaaaatgaaagggatgtgaaattt |
33221428 |
T |
|
| Q |
101 |
atagacacactgcaatgttaccttgaatacccttatatggccccacttaagttgttgagagtgaaaacaaagatacactgacacgtacgaggtttt |
196 |
Q |
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||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33221429 |
atagacacactacaatgttacctcgaatacccttatatggccccacttaagttgttgagagtgaaaacaaagatacactgacacgtacgaggtttt |
33221524 |
T |
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