View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7108_low_3 (Length: 347)
Name: NF7108_low_3
Description: NF7108
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7108_low_3 |
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Alignment Details
Target: chr1 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 3 - 311
Target Start/End: Original strand, 758059 - 758367
Alignment:
| Q |
3 |
aaaatgatttataataaaatacggagggaatagttgataacatttttaagagttacccatgcttatatcaacatagaatttttaacttcatttaaattat |
102 |
Q |
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| T |
758059 |
aaaattatttataataaaatacggagggaatagttgataacatttttaaaagttacccatgcttatatcaacatagaatttttaacttcatttaaattat |
758158 |
T |
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| Q |
103 |
aagaaaacatggtaaatatttgcatagatgataaatatagtaaggtaatagcaatagtggagacttcatcaataagcaatcctatatgatgcttaagtat |
202 |
Q |
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| T |
758159 |
aagaaaacatagtaaatatttgcatagatgatgaatatagtaaggtaatagcaatagtggagacttcatcaataagcaatcctatatgatgcttaagtat |
758258 |
T |
|
| Q |
203 |
ctatctcctctccttctttgcctaaatgcgttgtacaaaagtcttttccactgaaacagtagaccatattgaacacttttatgtgttccttgatgatacg |
302 |
Q |
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| T |
758259 |
ctatctcctctccttctttgcctaaatgcgttgtacaaaagtcttttccactgaaacagtagatcatattgaacacttttatgtgttccttgatgatacg |
758358 |
T |
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| Q |
303 |
atttgtgaa |
311 |
Q |
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||||||||| |
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| T |
758359 |
atttgtgaa |
758367 |
T |
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